View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15191_high_2 (Length: 407)

Name: NF15191_high_2
Description: NF15191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15191_high_2
NF15191_high_2
[»] chr4 (12 HSPs)
chr4 (1-151)||(31009997-31010147)
chr4 (163-306)||(31009682-31009841)
chr4 (337-393)||(31009595-31009651)
chr4 (74-144)||(24550812-24550882)
chr4 (74-145)||(25726594-25726665)
chr4 (74-144)||(24712087-24712157)
chr4 (99-144)||(1083532-1083577)
chr4 (74-143)||(3084302-3084371)
chr4 (99-144)||(37166162-37166207)
chr4 (99-144)||(45725162-45725206)
chr4 (99-131)||(17815214-17815246)
chr4 (96-132)||(31435989-31436025)
[»] chr8 (22 HSPs)
chr8 (73-146)||(45406321-45406394)
chr8 (99-144)||(22762028-22762073)
chr8 (72-144)||(7772109-7772181)
chr8 (74-151)||(13634845-13634922)
chr8 (74-151)||(13735258-13735335)
chr8 (96-133)||(23554891-23554928)
chr8 (96-144)||(14243720-14243768)
chr8 (80-144)||(44604880-44604944)
chr8 (73-144)||(15129635-15129706)
chr8 (73-144)||(38953539-38953610)
chr8 (73-131)||(4694759-4694817)
chr8 (74-144)||(20993536-20993606)
chr8 (73-151)||(24241950-24242028)
chr8 (74-144)||(26737970-26738040)
chr8 (99-145)||(31291243-31291289)
chr8 (74-132)||(42650167-42650225)
chr8 (99-144)||(34642496-34642541)
chr8 (73-146)||(36482113-36482186)
chr8 (74-146)||(8547187-8547259)
chr8 (99-151)||(33067440-33067492)
chr8 (103-151)||(36442334-36442382)
chr8 (68-144)||(37817369-37817445)
[»] chr5 (14 HSPs)
chr5 (73-144)||(28391171-28391242)
chr5 (74-144)||(1287314-1287384)
chr5 (73-151)||(10011468-10011546)
chr5 (73-144)||(9068801-9068872)
chr5 (73-144)||(12878177-12878248)
chr5 (99-144)||(671118-671163)
chr5 (98-151)||(2025733-2025786)
chr5 (96-144)||(6219249-6219297)
chr5 (99-151)||(42337895-42337947)
chr5 (98-144)||(40199163-40199209)
chr5 (99-144)||(6053110-6053155)
chr5 (102-146)||(5029848-5029892)
chr5 (99-151)||(26526537-26526589)
chr5 (96-132)||(35232564-35232600)
[»] scaffold0242 (2 HSPs)
scaffold0242 (80-144)||(15063-15127)
scaffold0242 (80-144)||(23898-23962)
[»] scaffold0244 (1 HSPs)
scaffold0244 (74-144)||(7816-7886)
[»] chr1 (12 HSPs)
chr1 (74-144)||(49500860-49500930)
chr1 (99-151)||(15952884-15952936)
chr1 (80-144)||(29511113-29511177)
chr1 (77-144)||(15331121-15331188)
chr1 (80-151)||(18216349-18216420)
chr1 (74-144)||(5598300-5598370)
chr1 (77-143)||(41651075-41651141)
chr1 (74-144)||(43086530-43086600)
chr1 (99-144)||(11403193-11403238)
chr1 (72-121)||(19279934-19279983)
chr1 (73-146)||(40685527-40685600)
chr1 (72-144)||(45007750-45007822)
[»] chr7 (15 HSPs)
chr7 (74-151)||(42557554-42557631)
chr7 (74-151)||(47459415-47459492)
chr7 (96-144)||(28649425-28649473)
chr7 (73-144)||(40857399-40857470)
chr7 (96-134)||(6369549-6369587)
chr7 (96-134)||(6378014-6378052)
chr7 (97-151)||(19563147-19563201)
chr7 (95-144)||(4227354-4227403)
chr7 (99-144)||(30627648-30627693)
chr7 (74-151)||(31717296-31717373)
chr7 (74-143)||(48729744-48729813)
chr7 (96-144)||(5222632-5222680)
chr7 (96-144)||(9932237-9932285)
chr7 (99-131)||(28382613-28382645)
chr7 (72-144)||(35157143-35157215)
[»] chr3 (15 HSPs)
chr3 (99-144)||(1562819-1562864)
chr3 (74-143)||(44037504-44037573)
chr3 (99-144)||(51053642-51053687)
chr3 (73-151)||(10047870-10047948)
chr3 (74-144)||(11249959-11250029)
chr3 (74-144)||(24751752-24751822)
chr3 (72-146)||(40559671-40559745)
chr3 (83-144)||(1218430-1218491)
chr3 (99-144)||(16135026-16135071)
chr3 (71-144)||(29212124-29212197)
chr3 (99-144)||(33886429-33886474)
chr3 (71-144)||(40193015-40193088)
chr3 (99-151)||(2861076-2861128)
chr3 (99-131)||(46316549-46316581)
chr3 (98-146)||(48191117-48191165)
[»] chr6 (8 HSPs)
chr6 (81-133)||(10673252-10673304)
chr6 (73-144)||(8939624-8939695)
chr6 (74-144)||(10181044-10181114)
chr6 (70-144)||(31747045-31747119)
chr6 (80-125)||(8487631-8487676)
chr6 (72-144)||(14465881-14465953)
chr6 (72-144)||(17534582-17534654)
chr6 (72-144)||(31205242-31205314)
[»] chr2 (17 HSPs)
chr2 (99-151)||(727341-727393)
chr2 (96-144)||(12541395-12541443)
chr2 (99-151)||(18741450-18741502)
chr2 (80-144)||(38463144-38463208)
chr2 (74-146)||(42030243-42030314)
chr2 (73-144)||(13268034-13268105)
chr2 (73-144)||(43035438-43035509)
chr2 (74-144)||(39218680-39218750)
chr2 (74-144)||(42160316-42160386)
chr2 (99-144)||(18368818-18368863)
chr2 (106-143)||(39691949-39691986)
chr2 (99-144)||(40812041-40812086)
chr2 (70-118)||(11816861-11816909)
chr2 (99-151)||(15920666-15920718)
chr2 (98-154)||(16534992-16535048)
chr2 (96-144)||(38140712-38140760)
chr2 (72-144)||(42200921-42200993)
[»] scaffold0633 (1 HSPs)
scaffold0633 (77-143)||(3855-3921)
[»] scaffold0061 (1 HSPs)
scaffold0061 (74-144)||(8918-8988)
[»] scaffold0457 (1 HSPs)
scaffold0457 (99-151)||(6803-6855)


Alignment Details
Target: chr4 (Bit Score: 103; Significance: 4e-51; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 31010147 - 31009997
Alignment:
Q  1 atttttgaatattattgtgttaataatttcataaattaatcacaattgatggctaaattaatcaaagaaagatatccataagtcttagctgaatcggtaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||  |||||    
T  31010147 atttttgaatattattgtgttaataatttcataaattaatcataattgatggctaaattaatcaaagaaagacatccataagtcttagctcaactggtaa 31010048  T
Q  101 aatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactcaggta 151  Q
    ||||||||||||||||||   ||||||||||||    ||||||||||||||    
T  31010047 aatgccgaaattgttaggctaaatgtcatgatcaggtttcgaactcaggta 31009997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 163 - 306
Target Start/End: Complemental strand, 31009841 - 31009682
Alignment:
Q  163 ttaagtagattagttagtttaatatgaagaggagtttgtttacttg----------------cactctgtagtgtggaagtaccagctggtaaattcaga 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                |||||| ||||||| |||||||||||||||||||||||    
T  31009841 ttaagtagattagttagtttaatatgaagaggagtttgtttacttgtagttattgttacttgcactctctagtgtgtaagtaccagctggtaaattcaga 31009742  T
Q  247 agtcagaaccaagcggcaaaaaacagtaacagtacacgttaatgcgtacaaattcattta 306  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31009741 agtcagaaccaagcggcaaaaaacagtaacagtacaccttaatgcgtacaaattcattta 31009682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 337 - 393
Target Start/End: Complemental strand, 31009651 - 31009595
Alignment:
Q  337 agtttcactttcactacattctcgtgaaacttaccaacgaaccttccttttcttcct 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31009651 agtttcactttcactacattctcgtgaaacttaccaacgaaccttccttttcttcct 31009595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 24550812 - 24550882
Alignment:
Q  74 atccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||| ||||||||||| ||  || |||||||||||||||||||| || ||||||||||||  ||||||||    
T  24550812 atccagaagtcttagctcaactggcaaaatgccgaaattgttaggccggatgtcatgatcggggttcgaac 24550882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 74 - 145
Target Start/End: Original strand, 25726594 - 25726665
Alignment:
Q  74 atccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaact 145  Q
    ||||| ||||| ||||| || |||||||||| |||||||||||||  ||||| ||||||||  |||||||||    
T  25726594 atccacaagtcctagcttaaccggtaaaatgacgaaattgttaggcagaatgccatgatcggggttcgaact 25726665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 24712087 - 24712157
Alignment:
Q  74 atccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||| ||||| ||||| ||  || ||||||||||||||||||||||| ||||||||| ||  ||||||||    
T  24712087 atccagaagtcctagctcaactggcaaaatgccgaaattgttaggtcggatgtcatgaccggggttcgaac 24712157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 1083532 - 1083577
Alignment:
Q  99 aaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||||||||||||||||||||  ||||||||||||  ||||||||    
T  1083532 aaaatgccgaaattgttaggtcagatgtcatgatcggggttcgaac 1083577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 143
Target Start/End: Complemental strand, 3084371 - 3084302
Alignment:
Q  74 atccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaa 143  Q
    ||||| ||||| ||||| ||  || ||||||||||||||||||||||| ||| ||||||||  |||||||    
T  3084371 atccagaagtcctagctcaactggcaaaatgccgaaattgttaggtcggatgccatgatcggggttcgaa 3084302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 37166162 - 37166207
Alignment:
Q  99 aaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    |||||||||||||||||||| || ||||||||||||  ||||||||    
T  37166162 aaaatgccgaaattgttaggccggatgtcatgatcggggttcgaac 37166207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 45725162 - 45725206
Alignment:
Q  99 aaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    |||||||||||||||||||| || ||||||||||||| ||||||||    
T  45725162 aaaatgccgaaattgttagg-cggatgtcatgatcgaggttcgaac 45725206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 131
Target Start/End: Complemental strand, 17815246 - 17815214
Alignment:
Q  99 aaaatgccgaaattgttaggtcgaatgtcatga 131  Q
    ||||||||||||||||||||||||| |||||||    
T  17815246 aaaatgccgaaattgttaggtcgaacgtcatga 17815214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 31436025 - 31435989
Alignment:
Q  96 ggtaaaatgccgaaattgttaggtcgaatgtcatgat 132  Q
    ||||||||||||||||||||||| || ||||||||||    
T  31436025 ggtaaaatgccgaaattgttaggccggatgtcatgat 31435989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 146
Target Start/End: Original strand, 45406321 - 45406394
Alignment:
Q  73 tatccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactc 146  Q
    |||||| ||||| ||||| ||||| ||||||||||||||||||||| || ||||||||||||  ||||||||||    
T  45406321 tatccaaaagtcctagctcaatcgataaaatgccgaaattgttaggccggatgtcatgatcggggttcgaactc 45406394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 22762028 - 22762073
Alignment:
Q  99 aaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  22762028 aaaatgccgaaattgttaggtcggatgtcatgatcgaagttcgaac 22762073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 72 - 144
Target Start/End: Complemental strand, 7772181 - 7772109
Alignment:
Q  72 atatccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||||| ||||| ||||| ||  ||||||||||||||||||||||| || ||||||||||||  ||||||||    
T  7772181 atatccagaagtcctagctcaactggtaaaatgccgaaattgttaggccggatgtcatgatcggggttcgaac 7772109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 13634845 - 13634922
Alignment:
Q  74 atccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactcaggta 151  Q
    ||||| ||||||||||| ||  || ||||||||||||||||||||||  ||||||||||||  ||| |||||| ||||    
T  13634845 atccagaagtcttagctcaactggcaaaatgccgaaattgttaggtcagatgtcatgatcggggtttgaactccggta 13634922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 13735258 - 13735335
Alignment:
Q  74 atccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactcaggta 151  Q
    ||||| ||||||||||| ||  || ||||||||||||||||||||||  ||||||||||||  ||| |||||| ||||    
T  13735258 atccagaagtcttagctcaactggcaaaatgccgaaattgttaggtcagatgtcatgatcggggtttgaactccggta 13735335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 23554891 - 23554928
Alignment:
Q  96 ggtaaaatgccgaaattgttaggtcgaatgtcatgatc 133  Q
    |||||||||||||||||||||| |||||||||||||||    
T  23554891 ggtaaaatgccgaaattgttagatcgaatgtcatgatc 23554928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 14243720 - 14243768
Alignment:
Q  96 ggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    |||||||||||||||||||||||  ||||||||||| ||| ||||||||    
T  14243720 ggtaaaatgccgaaattgttaggctgaatgtcatgaccgaggttcgaac 14243768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 44604944 - 44604880
Alignment:
Q  80 aagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||| ||||| ||| || ||||||||||||||||||||||| ||| ||||||||  ||||||||    
T  44604944 aagtcctagctcaattggcaaaatgccgaaattgttaggtcggatgccatgatcggggttcgaac 44604880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 73 - 144
Target Start/End: Original strand, 15129635 - 15129706
Alignment:
Q  73 tatccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    |||||| ||||| ||||| || ||| |||||||| |||||||||||||  ||| ||||||||| ||||||||    
T  15129635 tatccagaagtcctagctcaaccggcaaaatgccaaaattgttaggtctgatgccatgatcgaggttcgaac 15129706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 73 - 144
Target Start/End: Complemental strand, 38953610 - 38953539
Alignment:
Q  73 tatccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    |||||| ||||||||||| ||  || |||||||||||||||||||| || ||||||||| ||  ||||||||    
T  38953610 tatccagaagtcttagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaac 38953539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 131
Target Start/End: Complemental strand, 4694817 - 4694759
Alignment:
Q  73 tatccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatga 131  Q
    |||||||||||| ||||| ||  || |||||| |||||||||||||||| |||||||||    
T  4694817 tatccataagtcctagctcaactggcaaaatgtcgaaattgttaggtcggatgtcatga 4694759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 20993536 - 20993606
Alignment:
Q  74 atccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||||||||| ||||| ||||| ||||||| ||||||||||||| || |||  |||||||  ||||||||    
T  20993536 atccataagtcctagctcaatcgataaaatgtcgaaattgttaggccggatgctatgatcggggttcgaac 20993606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 151
Target Start/End: Complemental strand, 24242028 - 24241950
Alignment:
Q  73 tatccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactcaggta 151  Q
    |||||| ||||| ||||| ||  |||||||||| ||||||||||||| | ||| ||||||||  |||||||||| ||||    
T  24242028 tatccagaagtcatagctcaactggtaaaatgcagaaattgttaggttggatgccatgatcggagttcgaactccggta 24241950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 26737970 - 26738040
Alignment:
Q  74 atccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||| ||||| ||||| ||  ||||||||||||||||||||||| || ||||||||| ||  ||||||||    
T  26737970 atccagaagtcctagctcaactggtaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaac 26738040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 31291243 - 31291289
Alignment:
Q  99 aaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaact 145  Q
    |||||||||||||||||||| |||| ||||||||||  |||||||||    
T  31291243 aaaatgccgaaattgttaggccgaacgtcatgatcggggttcgaact 31291289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 42650167 - 42650225
Alignment:
Q  74 atccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgat 132  Q
    ||||| ||||| || || || ||||||||||||||||||||||||||| ||| ||||||    
T  42650167 atccacaagtcctaactcaaccggtaaaatgccgaaattgttaggtcggatgccatgat 42650225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 34642541 - 34642496
Alignment:
Q  99 aaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||||||||||||||||||||| ||||||||| ||  ||||||||    
T  34642541 aaaatgccgaaattgttaggtcggatgtcatgaccggggttcgaac 34642496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 146
Target Start/End: Complemental strand, 36482186 - 36482113
Alignment:
Q  73 tatccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactc 146  Q
    |||||| ||||||||||| ||  | ||||||| ||||||||||||| ||||||  |||||||  ||||||||||    
T  36482186 tatccagaagtcttagcttaactgataaaatgtcgaaattgttaggccgaatgctatgatcggggttcgaactc 36482113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 146
Target Start/End: Complemental strand, 8547259 - 8547187
Alignment:
Q  74 atccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactc 146  Q
    ||||| ||||| ||||| ||  || ||||||||||||||||||||||| ||||||| | ||  ||||||||||    
T  8547259 atccagaagtcctagctcaactggcaaaatgccgaaattgttaggtcggatgtcataaccggagttcgaactc 8547187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 33067492 - 33067440
Alignment:
Q  99 aaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactcaggta 151  Q
    |||||||||||||||||||| || ||| ||||||||  |||||||||| ||||    
T  33067492 aaaatgccgaaattgttaggccggatgccatgatcggggttcgaactccggta 33067440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 36442334 - 36442382
Alignment:
Q  103 tgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactcaggta 151  Q
    ||||||||||||||||||| |||||||||| |  |||||||||| ||||    
T  36442334 tgccgaaattgttaggtcggatgtcatgattggggttcgaactccggta 36442382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 144
Target Start/End: Original strand, 37817369 - 37817445
Alignment:
Q  68 aaagatatccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    |||| |||||||||||| ||||| ||  || |||||| |||||||||||||||| ||| ||||| ||  ||||||||    
T  37817369 aaagttatccataagtcctagctcaactggcaaaatgacgaaattgttaggtcggatgccatgaccggggttcgaac 37817445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 73 - 144
Target Start/End: Original strand, 28391171 - 28391242
Alignment:
Q  73 tatccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    |||||| ||||| ||||| |||  ||||||||||||||||||||||||||||| ||||||||  ||||||||    
T  28391171 tatccagaagtcctagctaaattcgtaaaatgccgaaattgttaggtcgaatgccatgatcggagttcgaac 28391242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 1287314 - 1287384
Alignment:
Q  74 atccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||| ||||| ||||| ||| |||||||||||||||||||||||||| ||||||||| ||  ||||||||    
T  1287314 atccagaagtcctagctcaattggtaaaatgccgaaattgttaggtcggatgtcatgaccggggttcgaac 1287384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 73 - 151
Target Start/End: Original strand, 10011468 - 10011546
Alignment:
Q  73 tatccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactcaggta 151  Q
    |||||| ||||| ||||| || |||||||||| |||||||||||||||| ||| ||||||||  |||||||||| ||||    
T  10011468 tatccaaaagtcctagctcaaccggtaaaatgtcgaaattgttaggtcggatgccatgatcggagttcgaactccggta 10011546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 144
Target Start/End: Original strand, 9068801 - 9068872
Alignment:
Q  73 tatccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    |||||||||||| ||||| ||  ||||||||| |||||||||||||||| ||| ||||||||  ||||||||    
T  9068801 tatccataagtcctagctcaactggtaaaatgtcgaaattgttaggtcggatgccatgatcggggttcgaac 9068872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 144
Target Start/End: Complemental strand, 12878248 - 12878177
Alignment:
Q  73 tatccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    |||||| ||||| ||||| ||  || |||||||||||||||||||| || ||||||||||||| ||||||||    
T  12878248 tatccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgatcgaagttcgaac 12878177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 671163 - 671118
Alignment:
Q  99 aaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||||||||||||||||||||| ||||||||||||  ||||||||    
T  671163 aaaatgccgaaattgttaggtcggatgtcatgatcggggttcgaac 671118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 2025786 - 2025733
Alignment:
Q  98 taaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactcaggta 151  Q
    |||||||| ||||||||||||||| ||||||||||||  |||||||||| ||||    
T  2025786 taaaatgcggaaattgttaggtcggatgtcatgatcggggttcgaactccggta 2025733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 6219297 - 6219249
Alignment:
Q  96 ggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||||| |||||||||||||||||| ||||||||| || |||||||||    
T  6219297 ggtaaaacgccgaaattgttaggtcggatgtcatgaccggtgttcgaac 6219249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 42337947 - 42337895
Alignment:
Q  99 aaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactcaggta 151  Q
    ||||||||||||||||||||||| ||||||| ||||  |||||||||| ||||    
T  42337947 aaaatgccgaaattgttaggtcggatgtcataatcggagttcgaactctggta 42337895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 40199209 - 40199163
Alignment:
Q  98 taaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    |||||||||||||||||||||  | ||||||||||||| ||||||||    
T  40199209 taaaatgccgaaattgttaggctggatgtcatgatcgaagttcgaac 40199163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 6053155 - 6053110
Alignment:
Q  99 aaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||||||||||||||||||||| ||||||||| ||  ||||||||    
T  6053155 aaaatgccgaaattgttaggtcggatgtcatgaccggggttcgaac 6053110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 5029848 - 5029892
Alignment:
Q  102 atgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactc 146  Q
    |||||||||||||||||||| ||||||| ||||  ||||||||||    
T  5029848 atgccgaaattgttaggtcggatgtcataatcgtagttcgaactc 5029892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 26526537 - 26526589
Alignment:
Q  99 aaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactcaggta 151  Q
    ||||| |||||||||||||| |||| ||||||| ||| |||||||||| ||||    
T  26526537 aaaataccgaaattgttaggccgaacgtcatgaccgaggttcgaactccggta 26526589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 35232564 - 35232600
Alignment:
Q  96 ggtaaaatgccgaaattgttaggtcgaatgtcatgat 132  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  35232564 ggtaaaatgacgaaattgttagatcgaatgtcatgat 35232600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 15063 - 15127
Alignment:
Q  80 aagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||||||||| ||  | ||||||||||||||||||||| |||||||||||| ||| ||||||||    
T  15063 aagtcttagctcaactgataaaatgccgaaattgttaggccgaatgtcatgaccgaggttcgaac 15127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 23898 - 23962
Alignment:
Q  80 aagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||||||||| ||  | ||||||||||||||||||||| |||||||||||| ||| ||||||||    
T  23898 aagtcttagctcaactgataaaatgccgaaattgttaggccgaatgtcatgaccgaggttcgaac 23962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 144
Target Start/End: Complemental strand, 7886 - 7816
Alignment:
Q  74 atccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||| ||||||||||| ||| || ||||||||||||||||||| ||| ||||||||| ||  ||||||||    
T  7886 atccagaagtcttagctcaattggcaaaatgccgaaattgttagatcggatgtcatgaccggggttcgaac 7816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000001; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 49500860 - 49500930
Alignment:
Q  74 atccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||| ||||| ||||| ||  || |||||||||||||||||||| || ||||||||||||| ||||||||    
T  49500860 atccacaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgatcgaggttcgaac 49500930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 15952936 - 15952884
Alignment:
Q  99 aaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactcaggta 151  Q
    ||||||||||||||||||||||| |||| |||||||  |||||||||| ||||    
T  15952936 aaaatgccgaaattgttaggtcggatgttatgatcggggttcgaactccggta 15952884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 29511113 - 29511177
Alignment:
Q  80 aagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||| ||||| ||| ||||||||| ||||||||||||| |||||||||||| ||  ||||||||    
T  29511113 aagtcctagctcaattggtaaaatgacgaaattgttaggccgaatgtcatgaccggggttcgaac 29511177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 77 - 144
Target Start/End: Complemental strand, 15331188 - 15331121
Alignment:
Q  77 cataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    |||||||| ||||| ||  || ||||||||||||||||||||||| ||| ||||| ||| ||||||||    
T  15331188 cataagtcctagctcaactggaaaaatgccgaaattgttaggtcggatgccatgaccgaggttcgaac 15331121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 151
Target Start/End: Original strand, 18216349 - 18216420
Alignment:
Q  80 aagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactcaggta 151  Q
    ||||| ||||| ||| ||||||||||||||||||||||| || ||| ||||||||  |||| ||||| ||||    
T  18216349 aagtcctagctcaatgggtaaaatgccgaaattgttaggccggatgccatgatcggggttcaaactccggta 18216420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 5598300 - 5598370
Alignment:
Q  74 atccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||| ||||| ||||| ||  || ||||||||||||||||||||||| ||||||||| ||  ||||||||    
T  5598300 atccagaagtcctagctcaactggaaaaatgccgaaattgttaggtcggatgtcatgaccggagttcgaac 5598370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 41651075 - 41651141
Alignment:
Q  77 cataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaa 143  Q
    |||||||| ||||| ||  |||||||||||||||||||||||| | | ||||||||||  |||||||    
T  41651075 cataagtcctagctcaactggtaaaatgccgaaattgttaggttggacgtcatgatcggggttcgaa 41651141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 144
Target Start/End: Complemental strand, 43086600 - 43086530
Alignment:
Q  74 atccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||||||||| ||||| ||  || |||||||||||||||||||| || ||| ||||||||  ||||||||    
T  43086600 atccataagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgatcggggttcgaac 43086530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 11403193 - 11403238
Alignment:
Q  99 aaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||||||||||||||||||||| ||| ||||||||  ||||||||    
T  11403193 aaaatgccgaaattgttaggtcggatgccatgatcggggttcgaac 11403238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 121
Target Start/End: Complemental strand, 19279983 - 19279934
Alignment:
Q  72 atatccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcg 121  Q
    ||||||| ||||| ||||| ||  ||||||||||||||||||||||||||    
T  19279983 atatccagaagtcctagctcaactggtaaaatgccgaaattgttaggtcg 19279934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 146
Target Start/End: Original strand, 40685527 - 40685600
Alignment:
Q  73 tatccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactc 146  Q
    |||||| ||||| ||||| ||  || |||||| |||||||||||||||| ||||||||| ||  ||||||||||    
T  40685527 tatccagaagtcctagctcaactggcaaaatgtcgaaattgttaggtcggatgtcatgaccggggttcgaactc 40685600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 144
Target Start/End: Complemental strand, 45007822 - 45007750
Alignment:
Q  72 atatccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||||| || || ||||| ||| ||||||||  ||||||||||||| || ||||||||| ||| ||||||||    
T  45007822 atatccaaaaatcctagctcaattggtaaaatatcgaaattgttaggccggatgtcatgaccgaggttcgaac 45007750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000006; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 42557631 - 42557554
Alignment:
Q  74 atccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactcaggta 151  Q
    ||||||||||| ||||| ||| || |||||||||||||||||||| || ||| ||||||||  ||| |||||| ||||    
T  42557631 atccataagtcctagctcaattggcaaaatgccgaaattgttaggccggatgccatgatcggggtttgaactccggta 42557554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 47459415 - 47459492
Alignment:
Q  74 atccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactcaggta 151  Q
    ||||| ||||| ||||| ||  ||||||||| ||||||||||||| || ||||||||| ||| |||| ||||||||||    
T  47459415 atccaaaagtcatagctcaactggtaaaatgtcgaaattgttaggccggatgtcatgaccgaggttcaaactcaggta 47459492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 28649473 - 28649425
Alignment:
Q  96 ggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||||||  |||||||||||||||| ||||||||||||| ||||||||    
T  28649473 ggtaaaatagcgaaattgttaggtcggatgtcatgatcgaagttcgaac 28649425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 73 - 144
Target Start/End: Complemental strand, 40857470 - 40857399
Alignment:
Q  73 tatccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    |||||| ||||| ||||| ||  ||||||||| |||||||||||||||| ||| ||||||||  ||||||||    
T  40857470 tatccagaagtcctagctcaaatggtaaaatgtcgaaattgttaggtcggatgccatgatcggggttcgaac 40857399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 6369549 - 6369587
Alignment:
Q  96 ggtaaaatgccgaaattgttaggtcgaatgtcatgatcg 134  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  6369549 ggtaaaatgccgaaattgttaggccggatgtcatgatcg 6369587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 6378014 - 6378052
Alignment:
Q  96 ggtaaaatgccgaaattgttaggtcgaatgtcatgatcg 134  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  6378014 ggtaaaatgccgaaattgttaggccggatgtcatgatcg 6378052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 151
Target Start/End: Complemental strand, 19563201 - 19563147
Alignment:
Q  97 gtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactcaggta 151  Q
    ||||||||||||||||||||||||| ||| ||||||||  ||| |||||| ||||    
T  19563201 gtaaaatgccgaaattgttaggtcggatgccatgatcggggtttgaactccggta 19563147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 4227354 - 4227403
Alignment:
Q  95 cggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||||||| ||||||||||||||||| ||| ||||||||  ||||||||    
T  4227354 cggtaaaataccgaaattgttaggtcggatgccatgatcggggttcgaac 4227403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 30627648 - 30627693
Alignment:
Q  99 aaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    |||||| |||||||||||| ||| ||||||||||||| ||||||||    
T  30627648 aaaatgtcgaaattgttagatcggatgtcatgatcgaggttcgaac 30627693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 31717296 - 31717373
Alignment:
Q  74 atccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactcaggta 151  Q
    ||||| ||||| ||||| ||  ||||||||||||||||||||||| || ||| ||||| ||  |||||||||| ||||    
T  31717296 atccagaagtcctagctcaactggtaaaatgccgaaattgttaggccggatgccatgaccggggttcgaactccggta 31717373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 143
Target Start/End: Complemental strand, 48729813 - 48729744
Alignment:
Q  74 atccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaa 143  Q
    ||||| ||||| ||||| ||  || |||||||||||||||||||| || ||||||||||||  |||||||    
T  48729813 atccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgatcgtggttcgaa 48729744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 5222680 - 5222632
Alignment:
Q  96 ggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||||||||||||||||||| || | ||||||||||||  ||||||||    
T  5222680 ggtaaaatgccgaaattgttaagttggatgtcatgatcggggttcgaac 5222632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 9932285 - 9932237
Alignment:
Q  96 ggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    |||||||||||||||||||||||| | ||| ||||||||  ||||||||    
T  9932285 ggtaaaatgccgaaattgttaggttggatgccatgatcggagttcgaac 9932237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 28382613 - 28382645
Alignment:
Q  99 aaaatgccgaaattgttaggtcgaatgtcatga 131  Q
    ||||||||||||||||||||||| |||||||||    
T  28382613 aaaatgccgaaattgttaggtcggatgtcatga 28382645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 144
Target Start/End: Complemental strand, 35157215 - 35157143
Alignment:
Q  72 atatccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||||| ||||| ||||| ||  || |||||||||||||||||||| || ||||||||| ||  ||||||||    
T  35157215 atatccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaac 35157143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000006; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 1562819 - 1562864
Alignment:
Q  99 aaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||||||||||||||||||||| ||||||||||||  ||||||||    
T  1562819 aaaatgccgaaattgttaggtcggatgtcatgatcggggttcgaac 1562864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 143
Target Start/End: Complemental strand, 44037573 - 44037504
Alignment:
Q  74 atccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaa 143  Q
    ||||| ||||| ||||| ||  || ||||||||||||||||||||||| ||||| ||||||| |||||||    
T  44037573 atccagaagtcctagctcaactggcaaaatgccgaaattgttaggtcggatgtcgtgatcgaggttcgaa 44037504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 51053642 - 51053687
Alignment:
Q  99 aaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||||||||||||||||||||||| ||||||||||  ||||||||    
T  51053642 aaaatgccgaaattgttaggtcgaacgtcatgatcggggttcgaac 51053687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 151
Target Start/End: Original strand, 10047870 - 10047948
Alignment:
Q  73 tatccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactcaggta 151  Q
    |||||| ||||| ||||| ||| ||||||||||||||||||||| | || ||| ||||| ||  |||||||||| ||||    
T  10047870 tatccagaagtcctagctcaattggtaaaatgccgaaattgttatgccggatgccatgaccggggttcgaactctggta 10047948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 11249959 - 11250029
Alignment:
Q  74 atccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||| ||||| ||||| ||  |||||||||| ||||||||||||||| ||| ||||||||  ||||||||    
T  11249959 atccacaagtcctagctcaactggtaaaatgcagaaattgttaggtcggatgccatgatcggggttcgaac 11250029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 24751752 - 24751822
Alignment:
Q  74 atccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||| ||||| ||||| ||  || |||||||||||||||||||| || ||||||||||||  ||||||||    
T  24751752 atccacaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgatcggggttcgaac 24751822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 146
Target Start/End: Original strand, 40559671 - 40559745
Alignment:
Q  72 atatccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactc 146  Q
    ||||||| ||||| ||||| ||  | |||||||||||||||||||||||| ||| | ||||||  ||||||||||    
T  40559671 atatccagaagtcctagctcaactgataaaatgccgaaattgttaggtcggatgccttgatcggggttcgaactc 40559745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 1218491 - 1218430
Alignment:
Q  83 tcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    |||||||| ||  ||||||||||||||||||||||| || ||| ||||||||  ||||||||    
T  1218491 tcttagctcaactggtaaaatgccgaaattgttaggccggatgccatgatcggggttcgaac 1218430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 16135026 - 16135071
Alignment:
Q  99 aaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||||||||||||||||||||| |||||| |||||  ||||||||    
T  16135026 aaaatgccgaaattgttaggtcggatgtcaagatcggggttcgaac 16135071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 144
Target Start/End: Complemental strand, 29212197 - 29212124
Alignment:
Q  71 gatatccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    |||||||||||||| ||||| ||  || |||||||||||||||||||| || ||| ||||| ||  ||||||||    
T  29212197 gatatccataagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgaccggggttcgaac 29212124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 33886474 - 33886429
Alignment:
Q  99 aaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||||||||||||||||||||| ||||||||| ||  ||||||||    
T  33886474 aaaatgccgaaattgttaggtcggatgtcatgaccggggttcgaac 33886429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 144
Target Start/End: Complemental strand, 40193088 - 40193015
Alignment:
Q  71 gatatccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    |||||||| ||||| ||||| ||  ||||||||| ||||||||||||| || ||| ||||||||  ||||||||    
T  40193088 gatatccagaagtcctagcttaactggtaaaatgtcgaaattgttaggccggatgccatgatcggagttcgaac 40193015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 2861076 - 2861128
Alignment:
Q  99 aaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactcaggta 151  Q
    |||||| |||||||||||||||| | ||||||| ||| |||||||||| ||||    
T  2861076 aaaatgtcgaaattgttaggtcggacgtcatgaccgaagttcgaactccggta 2861128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 131
Target Start/End: Complemental strand, 46316581 - 46316549
Alignment:
Q  99 aaaatgccgaaattgttaggtcgaatgtcatga 131  Q
    ||||||||||||||||||||||| |||||||||    
T  46316581 aaaatgccgaaattgttaggtcggatgtcatga 46316549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 48191117 - 48191165
Alignment:
Q  98 taaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactc 146  Q
    ||||||||||||||||||||| || ||||||||| ||  ||||||||||    
T  48191117 taaaatgccgaaattgttaggccggatgtcatgaccggggttcgaactc 48191165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 10673252 - 10673304
Alignment:
Q  81 agtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatc 133  Q
    |||| ||||| || |||||||||||||||||||||||  ||||||||||||||    
T  10673252 agtcctagctcaaccggtaaaatgccgaaattgttagaccgaatgtcatgatc 10673304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 73 - 144
Target Start/End: Original strand, 8939624 - 8939695
Alignment:
Q  73 tatccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    |||||| ||||| ||||| ||  || ||||||||||||||||||||||| ||||||||| ||  ||||||||    
T  8939624 tatccagaagtcctagctcaactggcaaaatgccgaaattgttaggtcggatgtcatgaccggggttcgaac 8939695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 10181044 - 10181114
Alignment:
Q  74 atccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||| ||||| ||||| ||  || ||||||||||||||||||||||| ||||| ||||||  ||||||||    
T  10181044 atccagaagtcctagctcaactggcaaaatgccgaaattgttaggtcggatgtcgtgatcggggttcgaac 10181114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 144
Target Start/End: Complemental strand, 31747119 - 31747045
Alignment:
Q  70 agatatccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    |||||| || || |||||||| ||  ||||||||||||||||||||||| || ||| ||||||||  ||||||||    
T  31747119 agatattcagaaatcttagctcaactggtaaaatgccgaaattgttaggccggatgccatgatcggggttcgaac 31747045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 8487676 - 8487631
Alignment:
Q  80 aagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatg 125  Q
    ||||||||||| ||  ||||||||||||||||||||||| ||||||    
T  8487676 aagtcttagctcaactggtaaaatgccgaaattgttaggccgaatg 8487631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 144
Target Start/End: Complemental strand, 14465953 - 14465881
Alignment:
Q  72 atatccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    |||||||  |||| || |||||| ||||||||||| |||||||||||  | ||||||||||||  ||||||||    
T  14465953 atatccaagagtcctaactgaattggtaaaatgccaaaattgttaggctggatgtcatgatcggggttcgaac 14465881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 144
Target Start/End: Complemental strand, 17534654 - 17534582
Alignment:
Q  72 atatccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||||| ||||| ||||| ||  || |||||||||||||||||||| || ||||||||| ||  ||||||||    
T  17534654 atatccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccggggttcgaac 17534582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 144
Target Start/End: Complemental strand, 31205314 - 31205242
Alignment:
Q  72 atatccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||||| ||||| ||||| ||  || |||||||||||||||||||| || ||| ||||||||  ||||||||    
T  31205314 atatccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgccatgatcggggttcgaac 31205242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 727393 - 727341
Alignment:
Q  99 aaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactcaggta 151  Q
    ||||||||||||||||||||||| ||| ||||||||  |||||||||| ||||    
T  727393 aaaatgccgaaattgttaggtcggatgccatgatcggggttcgaactccggta 727341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 12541443 - 12541395
Alignment:
Q  96 ggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    |||||||| ||||||||||||||||| ||||||||||||  ||||||||    
T  12541443 ggtaaaataccgaaattgttaggtcggatgtcatgatcggggttcgaac 12541395  T

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Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 18741502 - 18741450
Alignment:
Q  99 aaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactcaggta 151  Q
    |||||||||||||||||||||||||  |||||||||| |||| ||||| ||||    
T  18741502 aaaatgccgaaattgttaggtcgaacatcatgatcgaggttcaaactccggta 18741450  T

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Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 38463144 - 38463208
Alignment:
Q  80 aagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||||||||| ||  || ||||||||||||||||||||||| |||| |||||||  ||||||||    
T  38463144 aagtcttagctcaactggcaaaatgccgaaattgttaggtcggatgttatgatcggggttcgaac 38463208  T

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Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 42030243 - 42030314
Alignment:
Q  74 atccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactc 146  Q
    ||||| ||||| ||||| || |||||||||| |||||||||||||||| |||||||||| ||  |||||||||    
T  42030243 atccagaagtcctagctcaa-cggtaaaatgtcgaaattgttaggtcggatgtcatgattgagattcgaactc 42030314  T

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Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 73 - 144
Target Start/End: Complemental strand, 13268105 - 13268034
Alignment:
Q  73 tatccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    |||||| ||||| ||||| ||  || ||||||||||||||||||||||| ||||||||| ||  ||||||||    
T  13268105 tatccagaagtcctagctcaactggcaaaatgccgaaattgttaggtcggatgtcatgaccggggttcgaac 13268034  T

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Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 73 - 144
Target Start/End: Original strand, 43035438 - 43035509
Alignment:
Q  73 tatccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    |||||| ||||| ||||| ||| || ||||| |||||||||||||| || ||||||||||||  ||||||||    
T  43035438 tatccagaagtcctagctcaattggcaaaataccgaaattgttaggccggatgtcatgatcggggttcgaac 43035509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 39218680 - 39218750
Alignment:
Q  74 atccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||| ||||| ||||| |||  | ||||||||||||||||||||||| |||| |||||||  ||||||||    
T  39218680 atccagaagtcctagctcaattcgaaaaatgccgaaattgttaggtcggatgttatgatcggggttcgaac 39218750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 144
Target Start/End: Complemental strand, 42160386 - 42160316
Alignment:
Q  74 atccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||| ||||| ||||| ||  || |||||||||||||||||||| || ||||||||||||  ||||||||    
T  42160386 atccagaagtcctagctcaactggcaaaatgccgaaattgttaggccggatgtcatgatcggggttcgaac 42160316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 18368818 - 18368863
Alignment:
Q  99 aaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||||||||||||||||||||| || |||||||||  ||||||||    
T  18368818 aaaatgccgaaattgttaggtcggatatcatgatcggggttcgaac 18368863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 143
Target Start/End: Original strand, 39691949 - 39691986
Alignment:
Q  106 cgaaattgttaggtcgaatgtcatgatcgatgttcgaa 143  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  39691949 cgaaattgttaggtcaaatgtcatgatcgaggttcgaa 39691986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 40812041 - 40812086
Alignment:
Q  99 aaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||||||||||||||||||||| ||||||||| ||  ||||||||    
T  40812041 aaaatgccgaaattgttaggtcggatgtcatgaccggggttcgaac 40812086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 11816909 - 11816861
Alignment:
Q  70 agatatccataagtcttagctgaatcggtaaaatgccgaaattgttagg 118  Q
    ||||||||| ||||| ||||| ||| ||||||||| |||||||||||||    
T  11816909 agatatccagaagtcctagctcaattggtaaaatgtcgaaattgttagg 11816861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 15920718 - 15920666
Alignment:
Q  99 aaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactcaggta 151  Q
    |||||||||||||||||||| || ||||||||| ||  |||||||| ||||||    
T  15920718 aaaatgccgaaattgttaggccggatgtcatgaccggggttcgaacccaggta 15920666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 16535048 - 16534992
Alignment:
Q  98 taaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactcaggtaact 154  Q
    ||||||| ||||||||||||| || ||||||||||||  |||||||| | |||||||    
T  16535048 taaaatgtcgaaattgttaggccggatgtcatgatcggagttcgaaccccggtaact 16534992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 38140712 - 38140760
Alignment:
Q  96 ggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||||||||||||||||||| | || ||||||||||||  ||||||||    
T  38140712 ggtaaaatgccgaaattgttaagccggatgtcatgatcggggttcgaac 38140760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 144
Target Start/End: Complemental strand, 42200993 - 42200921
Alignment:
Q  72 atatccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||||| ||||| ||||| ||  || |||||||| ||||||||||| || ||||||||||||  ||||||||    
T  42200993 atatccagaagtcctagctcaactggcaaaatgccaaaattgttaggccggatgtcatgatcggggttcgaac 42200921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0633 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0633
Description:

Target: scaffold0633; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 3921 - 3855
Alignment:
Q  77 cataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaa 143  Q
    |||||||| ||||| ||  |||||||||||||||||||||||| | | ||||||||||  |||||||    
T  3921 cataagtcctagctcaactggtaaaatgccgaaattgttaggttggacgtcatgatcggggttcgaa 3855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 144
Target Start/End: Complemental strand, 8988 - 8918
Alignment:
Q  74 atccataagtcttagctgaatcggtaaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaac 144  Q
    ||||| ||||| ||||| ||  || |||||||||||||||||||| || ||||||||| ||| ||||||||    
T  8988 atccagaagtcatagctcaactggcaaaatgccgaaattgttaggccggatgtcatgaccgaggttcgaac 8918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 6803 - 6855
Alignment:
Q  99 aaaatgccgaaattgttaggtcgaatgtcatgatcgatgttcgaactcaggta 151  Q
    |||||||||||||||||||| || ||||||||| ||  |||||||||| ||||    
T  6803 aaaatgccgaaattgttaggccggatgtcatgaccggggttcgaactccggta 6855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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