View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15192_high_25 (Length: 294)
Name: NF15192_high_25
Description: NF15192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15192_high_25 |
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Alignment Details
Target: chr3 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 14 - 280
Target Start/End: Complemental strand, 41085391 - 41085125
Alignment:
| Q |
14 |
atatatatgttgtattattcttcttatttattatttgacagaggagagcaaaaattacgagagataattaaatacggctgcattctatcatgaagtgaaa |
113 |
Q |
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| T |
41085391 |
atatatatgttgtattattcttcttatttattatttgacagaggagagcaaaaattacgagagataattaaatacggctgcattctatcatgaagtgaaa |
41085292 |
T |
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| Q |
114 |
gatagaatgctagctatagaaattatttatattaatggatatatatacatcgaataaagttttgtgcttcggctgcatctatcctttaatcttgggaaga |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41085291 |
gatagaatgctagctatagaaattatttatattaatggatatatatacatcgaataaagttttgtgcttcggctgcatctatcctttaatcttgggaaga |
41085192 |
T |
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| Q |
214 |
tttatactagttgtacaatttaaacaaattattcttagtagtacaagtttatttccacggtgaaaat |
280 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
41085191 |
tttatactagttgtacaatttaaacaaattattattagtagtacaagtttatttccacggtgaaaat |
41085125 |
T |
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