View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15192_low_22 (Length: 362)

Name: NF15192_low_22
Description: NF15192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15192_low_22
NF15192_low_22
[»] chr5 (16 HSPs)
chr5 (19-362)||(42267085-42267430)
chr5 (289-361)||(3640185-3640256)
chr5 (289-362)||(9226313-9226384)
chr5 (292-361)||(1839333-1839401)
chr5 (289-362)||(15953032-15953104)
chr5 (289-362)||(34270339-34270411)
chr5 (289-362)||(2224802-2224876)
chr5 (292-362)||(41865606-41865676)
chr5 (286-319)||(35099046-35099079)
chr5 (284-319)||(4430977-4431012)
chr5 (289-359)||(5007721-5007791)
chr5 (289-362)||(21136274-21136347)
chr5 (328-362)||(40829465-40829499)
chr5 (325-362)||(17402908-17402945)
chr5 (325-362)||(22098303-22098340)
chr5 (325-362)||(38493672-38493709)
[»] chr2 (26 HSPs)
chr2 (292-362)||(42372494-42372564)
chr2 (289-362)||(10711736-10711808)
chr2 (289-362)||(42678761-42678833)
chr2 (289-362)||(26277107-26277179)
chr2 (289-362)||(3012833-3012905)
chr2 (325-362)||(28679364-28679401)
chr2 (289-362)||(40937051-40937123)
chr2 (276-362)||(23352892-23352977)
chr2 (325-362)||(40700243-40700280)
chr2 (289-362)||(42866762-42866834)
chr2 (289-349)||(6646835-6646895)
chr2 (289-347)||(15141473-15141531)
chr2 (289-319)||(18176940-18176970)
chr2 (285-319)||(37257445-37257479)
chr2 (288-349)||(6511556-6511617)
chr2 (325-362)||(10472134-10472171)
chr2 (316-357)||(21738607-21738648)
chr2 (325-362)||(29449259-29449296)
chr2 (292-349)||(32972906-32972963)
chr2 (289-362)||(33737320-33737393)
chr2 (325-362)||(42532725-42532762)
chr2 (325-357)||(5361841-5361873)
chr2 (286-314)||(8427549-8427577)
chr2 (289-361)||(14891077-14891149)
chr2 (286-314)||(28245725-28245753)
chr2 (289-353)||(43725216-43725280)
[»] chr7 (22 HSPs)
chr7 (289-362)||(3937108-3937181)
chr7 (284-362)||(47078238-47078315)
chr7 (290-362)||(7817650-7817720)
chr7 (289-362)||(11352961-11353033)
chr7 (289-349)||(33224835-33224895)
chr7 (316-362)||(18111598-18111644)
chr7 (289-362)||(41399150-41399222)
chr7 (325-362)||(42584850-42584887)
chr7 (287-332)||(46148002-46148047)
chr7 (290-362)||(3062343-3062414)
chr7 (289-319)||(13162919-13162949)
chr7 (292-362)||(23680025-23680095)
chr7 (312-362)||(29855261-29855311)
chr7 (316-362)||(40854641-40854687)
chr7 (289-319)||(41025761-41025791)
chr7 (289-362)||(3293141-3293213)
chr7 (325-362)||(41430138-41430175)
chr7 (325-362)||(41989729-41989766)
chr7 (286-319)||(43573584-43573617)
chr7 (289-362)||(45420047-45420120)
chr7 (325-361)||(20337358-20337394)
chr7 (326-362)||(36352571-36352607)
[»] chr1 (30 HSPs)
chr1 (289-362)||(33358145-33358218)
chr1 (289-362)||(44632540-44632612)
chr1 (289-362)||(48220131-48220203)
chr1 (289-360)||(8200087-8200157)
chr1 (289-362)||(47398438-47398511)
chr1 (286-362)||(36494472-36494547)
chr1 (289-361)||(49241493-49241564)
chr1 (288-362)||(18336157-18336230)
chr1 (288-361)||(41507182-41507255)
chr1 (289-362)||(50781557-50781629)
chr1 (290-362)||(19969549-19969620)
chr1 (290-362)||(50882097-50882168)
chr1 (325-361)||(52437542-52437578)
chr1 (284-319)||(1852992-1853027)
chr1 (290-349)||(45065901-45065960)
chr1 (289-319)||(902638-902668)
chr1 (316-362)||(12798586-12798632)
chr1 (288-346)||(32319311-32319369)
chr1 (289-319)||(33024612-33024642)
chr1 (283-353)||(40139120-40139190)
chr1 (289-355)||(40596048-40596114)
chr1 (289-362)||(611622-611695)
chr1 (325-362)||(740942-740979)
chr1 (325-362)||(30536039-30536076)
chr1 (325-362)||(49931601-49931638)
chr1 (325-362)||(50775143-50775180)
chr1 (325-357)||(12999814-12999846)
chr1 (287-319)||(21486358-21486390)
chr1 (289-353)||(27687515-27687579)
chr1 (286-362)||(50239151-50239227)
[»] chr4 (27 HSPs)
chr4 (289-351)||(39312613-39312675)
chr4 (289-362)||(28657428-28657500)
chr4 (289-362)||(43769723-43769795)
chr4 (289-362)||(26718380-26718452)
chr4 (289-362)||(26731008-26731080)
chr4 (289-362)||(31657658-31657730)
chr4 (289-362)||(53405817-53405888)
chr4 (288-362)||(42667217-42667289)
chr4 (289-351)||(55601698-55601760)
chr4 (289-362)||(12138864-12138937)
chr4 (325-362)||(13389439-13389476)
chr4 (289-362)||(37066000-37066072)
chr4 (290-362)||(52846214-52846285)
chr4 (289-319)||(624353-624383)
chr4 (328-362)||(1795968-1796002)
chr4 (289-362)||(4949518-4949589)
chr4 (324-362)||(19232120-19232158)
chr4 (316-362)||(31559577-31559623)
chr4 (328-362)||(49372299-49372333)
chr4 (324-362)||(50980637-50980675)
chr4 (288-357)||(4974110-4974179)
chr4 (287-336)||(28868658-28868706)
chr4 (325-362)||(38792876-38792913)
chr4 (325-362)||(44257716-44257753)
chr4 (325-362)||(49585042-49585079)
chr4 (325-362)||(51930874-51930911)
chr4 (290-362)||(5386385-5386457)
[»] chr8 (26 HSPs)
chr8 (289-362)||(30439493-30439565)
chr8 (287-362)||(28646681-28646756)
chr8 (287-362)||(28651265-28651340)
chr8 (287-361)||(6968220-6968294)
chr8 (289-362)||(7586149-7586221)
chr8 (289-349)||(37657001-37657061)
chr8 (289-362)||(41541869-41541941)
chr8 (289-362)||(41639786-41639859)
chr8 (283-315)||(2732982-2733014)
chr8 (288-362)||(22706228-22706301)
chr8 (292-361)||(157070-157139)
chr8 (325-362)||(6440129-6440166)
chr8 (325-362)||(8671542-8671579)
chr8 (325-362)||(25830232-25830269)
chr8 (325-362)||(35067208-35067245)
chr8 (289-322)||(36110138-36110171)
chr8 (325-362)||(38675651-38675688)
chr8 (325-362)||(43285949-43285986)
chr8 (325-362)||(43715922-43715959)
chr8 (287-319)||(1633931-1633963)
chr8 (325-357)||(24798349-24798381)
chr8 (289-349)||(35356167-35356227)
chr8 (287-319)||(38708337-38708369)
chr8 (290-362)||(39211054-39211126)
chr8 (289-357)||(43419879-43419947)
chr8 (317-357)||(45504601-45504641)
[»] chr3 (31 HSPs)
chr3 (289-362)||(49761319-49761391)
chr3 (289-362)||(54195351-54195424)
chr3 (288-361)||(1337827-1337899)
chr3 (325-362)||(49167798-49167835)
chr3 (287-359)||(39907536-39907607)
chr3 (289-362)||(26672412-26672482)
chr3 (289-362)||(3281703-3281775)
chr3 (289-362)||(21005163-21005235)
chr3 (325-362)||(21195877-21195914)
chr3 (285-362)||(45205284-45205361)
chr3 (289-362)||(51465901-51465973)
chr3 (326-362)||(44813434-44813470)
chr3 (288-319)||(46982943-46982974)
chr3 (289-319)||(8821630-8821660)
chr3 (312-362)||(27541489-27541539)
chr3 (289-319)||(39671139-39671169)
chr3 (325-362)||(26452709-26452746)
chr3 (289-362)||(28700472-28700545)
chr3 (289-362)||(32421616-32421688)
chr3 (328-361)||(34662057-34662090)
chr3 (325-362)||(42358625-42358662)
chr3 (325-362)||(48176837-48176874)
chr3 (325-362)||(52485520-52485557)
chr3 (289-362)||(54007475-54007548)
chr3 (289-353)||(1765404-1765468)
chr3 (286-362)||(11234200-11234275)
chr3 (325-357)||(29917015-29917047)
chr3 (325-357)||(29966168-29966200)
chr3 (289-361)||(48893354-48893426)
chr3 (287-319)||(49363292-49363324)
chr3 (287-319)||(50638390-50638422)
[»] chr6 (13 HSPs)
chr6 (288-355)||(32644622-32644689)
chr6 (295-362)||(14699651-14699717)
chr6 (292-362)||(14693239-14693308)
chr6 (289-319)||(30036835-30036865)
chr6 (325-362)||(1376412-1376449)
chr6 (325-362)||(1384160-1384197)
chr6 (289-362)||(5028253-5028325)
chr6 (286-355)||(12177574-12177643)
chr6 (325-362)||(13423016-13423053)
chr6 (325-362)||(16337909-16337946)
chr6 (325-362)||(17551365-17551402)
chr6 (325-362)||(23653880-23653917)
chr6 (289-337)||(28748124-28748172)
[»] scaffold0471 (1 HSPs)
scaffold0471 (289-322)||(7-40)
[»] scaffold0449 (1 HSPs)
scaffold0449 (286-315)||(9200-9229)
[»] scaffold0100 (1 HSPs)
scaffold0100 (289-337)||(44786-44834)


Alignment Details
Target: chr5 (Bit Score: 255; Significance: 1e-142; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 19 - 362
Target Start/End: Original strand, 42267085 - 42267430
Alignment:
Q  19 atgaggaattgtactttcacatatttcttggaatcaccttctctgaatgtaacatg--gttcaacatattctaaaggtttgttggtggatctgttgaagc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||    
T  42267085 atgaggaattgtactttcacatatttcttggaatcaccttctctgaatgtaacaataagttcaacatattctaaaggtttgttggtggatctgttgaagc 42267184  T
Q  117 cacataggtttcatcaaacatatcatatcatatttttgctcgttagatgtaaggtgtgaaataattctcaatacatgatgtcacacaaacttccttagtt 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  42267185 cacataggtttcatcaaacatatcatatcatatttttgctcgttagatgtaaggtgtgaaataattctgaatacatgatgtcacacaaacttccttagtt 42267284  T
Q  217 tacgagaatggaannnnnnngaaaagctaaattttttataat-ccagtcggaacacatagatatttctaatttgagaaatgatatttgaacatctattta 315  Q
    |||||||||||||       ||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||  |||||    
T  42267285 tacgagaatggaatttttttgaaaagctaaattttttataatgtcagtc-gaacacatagatatttctaatttgagaaatgatatttgatcattcattta 42267383  T
Q  316 gtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||| ||  || |||||||||||||||||||||||||||||||||||    
T  42267384 gtgacaactttttctctcatacacacattatatttttactttatctc 42267430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 289 - 361
Target Start/End: Complemental strand, 3640256 - 3640185
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatct 361  Q
    |||||||||||||||||||||||||| | || ||  ||||||||||||| |||||||| ||||||||||||||    
T  3640256 gagaaatgatatttgaacatctattttgagacaactttctctctcatactcacattat-tttttactttatct 3640185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 9226313 - 9226384
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||||| ||||| ||| ||  ||||||||||||| |||||  |||||||||||||||||    
T  9226313 gagaaatgatatttgaacatccatttaatgacaactttctctctcatactcacat--tatttttactttatctc 9226384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 361
Target Start/End: Complemental strand, 1839401 - 1839333
Alignment:
Q  292 aaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatct 361  Q
    |||||||||||||||||| |||| |||| ||  ||||||||||||| |||||||| ||||||||||||||    
T  1839401 aaatgatatttgaacatccattttgtgacaactttctctctcatactcacattat-tttttactttatct 1839333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 15953104 - 15953032
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||||||||||||||||||||| |||| ||  || |||||||||| || ||||| |||||||||||||||    
T  15953104 gagaaatgatatttgaacatctattttgtgacaactttttctctcatactcatattat-tttttactttatctc 15953032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 34270339 - 34270411
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||||| | || |||| ||| ||||||||||||| | |||||| |||||||||||||||    
T  34270339 gagaaatgatatttgaacatccactttgtgacaattttctctctcatactcccattat-tttttactttatctc 34270411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 2224802 - 2224876
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatattt-ttactttatctc 362  Q
    |||||||||||||||||||||||||| |||| ||| || ||||||||||  ||||||| |||  |||||||||||    
T  2224802 gagaaatgatatttgaacatctatttggtgacaattttatctctcatacttacattatttttcgtactttatctc 2224876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 362
Target Start/End: Complemental strand, 41865676 - 41865606
Alignment:
Q  292 aaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||||||  ||| |||||| |||| ||| || ||| |||||| ||||||||||||||||||||||||    
T  41865676 aaatgatatttatacaactattttgtgacaattttatctttcatactcacattatatttttactttatctc 41865606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 319
Target Start/End: Complemental strand, 35099079 - 35099046
Alignment:
Q  286 tttgagaaatgatatttgaacatctatttagtga 319  Q
    ||||||||||||||||||||||||||||||||||    
T  35099079 tttgagaaatgatatttgaacatctatttagtga 35099046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 319
Target Start/End: Complemental strand, 4431012 - 4430977
Alignment:
Q  284 aatttgagaaatgatatttgaacatctatttagtga 319  Q
    |||||||||||||||||||||||||| |||||||||    
T  4431012 aatttgagaaatgatatttgaacatccatttagtga 4430977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 359
Target Start/End: Complemental strand, 5007791 - 5007721
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttat 359  Q
    ||||||||||||||||||| | |||| |||| ||| |||||| ||||||||| ||| | |||||| |||||    
T  5007791 gagaaatgatatttgaacaacaattttgtgacaattttctctttcatacacatattgtgtttttattttat 5007721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 21136274 - 21136347
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtga-aaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||||||||| ||||||||||| |||| |||  |||||| |||||| ||| |||| |||||||||||||||    
T  21136274 gagaaatgatattttaacatctattttgtgataaactttctctttcatactcacgttat-tttttactttatctc 21136347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 328 - 362
Target Start/End: Original strand, 40829465 - 40829499
Alignment:
Q  328 tctctcatacacacattatatttttactttatctc 362  Q
    |||||||||| ||||||||||||||||||||||||    
T  40829465 tctctcatactcacattatatttttactttatctc 40829499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 17402945 - 17402908
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  17402945 ttctatctcatagacacattatatttttactttatctc 17402908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Original strand, 22098303 - 22098340
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  22098303 ttctctctcatactcacattatatttttactttctctc 22098340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Original strand, 38493672 - 38493709
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  38493672 ttctctctcatactcacattataattttactttatctc 38493709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 4e-20; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 292 - 362
Target Start/End: Original strand, 42372494 - 42372564
Alignment:
Q  292 aaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||||||||||||||||||||||| ||  ||||||||||||| |||||||| |||||||||||||||    
T  42372494 aaatgatatttgaacatctatttagtgacaactttctctctcatactcacattatttttttactttatctc 42372564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 10711736 - 10711808
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||||||||||||||||||||| |||| ||| ||||||||||||| |||||||  |||||||||||||||    
T  10711736 gagaaatgatatttgaacatctattttgtgacaattttctctctcatactcacatta-ctttttactttatctc 10711808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 42678761 - 42678833
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||||| ||||||||| ||  ||||||||||||| |||||||| |||||||||||||||    
T  42678761 gagaaatgatatttgaacatccatttagtgacaactttctctctcatactcacattat-tttttactttatctc 42678833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 26277107 - 26277179
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||||| ||||||||| ||  |||||||| |||| |||||||| |||||||||||||||    
T  26277107 gagaaatgatatttgaacatccatttagtgacaactttctctcttatactcacattat-tttttactttatctc 26277179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 3012905 - 3012833
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||||| |||| |||| ||  |||||||||||||  ||||||| |||||||||||||||    
T  3012905 gagaaatgatatttgaacatccattttgtgacaactttctctctcatacttacattat-tttttactttatctc 3012833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 362
Target Start/End: Original strand, 28679364 - 28679401
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28679364 ttctctctcatacacacattatatttttactttatctc 28679401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 40937123 - 40937051
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||| ||||||||||| |||| |||| ||  ||||||||||||| |||||||| |||||||||||||||    
T  40937123 gagaaatgacatttgaacatccattttgtgataactttctctctcatactcacattat-tttttactttatctc 40937051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 362
Target Start/End: Complemental strand, 23352977 - 23352892
Alignment:
Q  276 atatttctaatttgagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||||| | |||| |||||||||| ||||||| | |||| |||| ||  ||||||||||||| |||||||| |||||||||||||||    
T  23352977 atattttttattttagaaatgatacttgaacagccattttgtgacaactttctctctcatactcacattat-tttttactttatctc 23352892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 325 - 362
Target Start/End: Original strand, 40700243 - 40700280
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  40700243 ttctctctcatactcacattatatttttactttatctc 40700280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 42866762 - 42866834
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||||||||||||| || |||| |||| ||  || |||||||||| |||||||| |||||||||||||||    
T  42866762 gagaaatgatatttgaacgtccattttgtgacaactttttctctcatactcacattat-tttttactttatctc 42866834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 349
Target Start/End: Original strand, 6646835 - 6646895
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatt 349  Q
    ||||||||||||||||||||| |||| |||| ||  ||||||||||||| ||||| |||||    
T  6646835 gagaaatgatatttgaacatccattttgtgacaactttctctctcatactcacatcatatt 6646895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 347
Target Start/End: Original strand, 15141473 - 15141531
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattata 347  Q
    ||||||||||||||| ||||||||||  ||| ||  ||||||||||||| |||||||||    
T  15141473 gagaaatgatatttgtacatctattttatgacaactttctctctcatactcacattata 15141531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 18176940 - 18176970
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtga 319  Q
    |||||||||||||||||||||||||||||||    
T  18176940 gagaaatgatatttgaacatctatttagtga 18176970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 319
Target Start/End: Original strand, 37257445 - 37257479
Alignment:
Q  285 atttgagaaatgatatttgaacatctatttagtga 319  Q
    ||||||||||||||||||||||||| |||||||||    
T  37257445 atttgagaaatgatatttgaacatccatttagtga 37257479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 349
Target Start/End: Complemental strand, 6511617 - 6511556
Alignment:
Q  288 tgagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatt 349  Q
    |||||||||||||||| ||||| |||| |||| ||| ||||||||||||   ||||||||||    
T  6511617 tgagaaatgatatttggacatccattttgtgacaattttctctctcatatttacattatatt 6511556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 10472171 - 10472134
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  10472171 ttctctctcatactcacattatatttttactttctctc 10472134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 21738648 - 21738607
Alignment:
Q  316 gtgaaaatcttctctctcatacacacattatatttttacttt 357  Q
    |||| ||| ||||||||||||| |||||||||||||||||||    
T  21738648 gtgataattttctctctcatactcacattatatttttacttt 21738607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Original strand, 29449259 - 29449296
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  29449259 ttctctctcatactcacattatatttttactttctctc 29449296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 349
Target Start/End: Complemental strand, 32972963 - 32972906
Alignment:
Q  292 aaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatt 349  Q
    |||||||||||||||||| |||| |||| ||  ||||||||||||| ||||| |||||    
T  32972963 aaatgatatttgaacatccattttgtgacaactttctctctcatactcacatcatatt 32972906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 33737393 - 33737320
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||  | |||| |||| ||  ||||||||||||| ||| |||| |||||||||| ||||    
T  33737393 gagaaatgatatttgaactaccattttgtgacaaatttctctctcatactcacgttatgtttttactttctctc 33737320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 42532762 - 42532725
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  42532762 ttctttctcatactcacattatatttttactttatctc 42532725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 357
Target Start/End: Original strand, 5361841 - 5361873
Alignment:
Q  325 ttctctctcatacacacattatatttttacttt 357  Q
    ||||||||||||| |||||||||||||||||||    
T  5361841 ttctctctcatactcacattatatttttacttt 5361873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 314
Target Start/End: Original strand, 8427549 - 8427577
Alignment:
Q  286 tttgagaaatgatatttgaacatctattt 314  Q
    |||||||||||||||||||||||||||||    
T  8427549 tttgagaaatgatatttgaacatctattt 8427577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 361
Target Start/End: Complemental strand, 14891149 - 14891077
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatct 361  Q
    ||||||||||||||| ||| |||||| |||| ||  |||| |||||||  ||||||||  |||||||||||||    
T  14891149 gagaaatgatatttgtacaactattttgtgataactttctttctcatattcacattatgattttactttatct 14891077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 314
Target Start/End: Original strand, 28245725 - 28245753
Alignment:
Q  286 tttgagaaatgatatttgaacatctattt 314  Q
    |||||||||||||||||||||||||||||    
T  28245725 tttgagaaatgatatttgaacatctattt 28245753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 353
Target Start/End: Original strand, 43725216 - 43725280
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatattttta 353  Q
    ||||||||||||||| ||||||| ||  ||| ||  ||||||||||||| |||||||| ||||||    
T  43725216 gagaaatgatatttgtacatctactttatgacaactttctctctcatactcacattatgttttta 43725280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 3937181 - 3937108
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||||||||||||||||||||| |||| ||  ||||||||||||| |||||||| |||||||||||||||    
T  3937181 gagaaatgatatttgaacatctattttgtgacaactttctctctcatactcacattatctttttactttatctc 3937108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 362
Target Start/End: Complemental strand, 47078315 - 47078238
Alignment:
Q  284 aatttgagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||| ||||||||||||||||||||||||||  ||| ||  ||||||||||||| |||||||| |||||||||||||||    
T  47078315 aattagagaaatgatatttgaacatctattttatgacaactttctctctcatactcacattat-tttttactttatctc 47078238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 362
Target Start/End: Original strand, 7817650 - 7817720
Alignment:
Q  290 agaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||||||||||||||| |||| |||| ||  ||||||||||||| |||||  |||||||||||||||||    
T  7817650 agaaatgatatttgaacatccattttgtgacaactttctctctcatactcacat--tatttttactttatctc 7817720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 11353033 - 11352961
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||||| |||| |||| ||  ||||||||||||| |||||||  |||||||||||||||    
T  11353033 gagaaatgatatttgaacatcaattttgtgacaactttctctctcatactcacatta-ctttttactttatctc 11352961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 289 - 349
Target Start/End: Original strand, 33224835 - 33224895
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatt 349  Q
    |||||||||||||||||||||||||| |||| ||  ||||||||||||| ||||| |||||    
T  33224835 gagaaatgatatttgaacatctattttgtgacaactttctctctcatactcacatcatatt 33224895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 362
Target Start/End: Complemental strand, 18111644 - 18111598
Alignment:
Q  316 gtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  18111644 gtgacaattttctctctcatactcacattatatttttactttatctc 18111598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 41399222 - 41399150
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||| ||||||||||||||||| |||| ||  || |||||||||| || ||||| |||||||||||||||    
T  41399222 gagaaatggtatttgaacatctattttgtgataactttatctctcatactcatattat-tttttactttatctc 41399150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 325 - 362
Target Start/End: Original strand, 42584850 - 42584887
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  42584850 ttctctctcatactcacattatatttttactttatctc 42584887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 46148002 - 46148047
Alignment:
Q  287 ttgagaaatgatatttgaacatctatttagtgaaaatcttctctct 332  Q
    ||||||||||||||||||||||||||||| ||| ||| ||||||||    
T  46148002 ttgagaaatgatatttgaacatctatttaatgataattttctctct 46148047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 362
Target Start/End: Original strand, 3062343 - 3062414
Alignment:
Q  290 agaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||||||||||||||| |||| |||| ||  |||||||| |||| |||||||  |||||||||||||||    
T  3062343 agaaatgatatttgaacatccattttgtgacaactttctctcttatactcacatta-ctttttactttatctc 3062414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 13162919 - 13162949
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtga 319  Q
    |||||||||||||||||||||||||||||||    
T  13162919 gagaaatgatatttgaacatctatttagtga 13162949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 362
Target Start/End: Complemental strand, 23680095 - 23680025
Alignment:
Q  292 aaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||||||| ||| |||||| |||| ||  |||| | ||||||||||||||| |||||||||| ||||    
T  23680095 aaatgatatttgtacaactattttgtgacaactttctttttcatacacacattatgtttttactttgtctc 23680025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 29855261 - 29855311
Alignment:
Q  312 tttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||| ||  ||||||||||||| |||||||||||||||||| |||||    
T  29855261 tttagtgacaactttctctctcatactcacattatatttttacttcatctc 29855311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 362
Target Start/End: Complemental strand, 40854687 - 40854641
Alignment:
Q  316 gtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||| ||| ||||||||||||| ||||||||||||||||||| ||||    
T  40854687 gtgacaattttctctctcatactcacattatatttttactttctctc 40854641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 41025761 - 41025791
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtga 319  Q
    |||||||||||||||||||||||||||||||    
T  41025761 gagaaatgatatttgaacatctatttagtga 41025791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 3293141 - 3293213
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||||  |||| |||| ||  ||||||||||||  ||||| || |||||||||||||||    
T  3293141 gagaaatgatatttgaacattcatttggtgacaactttctctctcatattcacataat-tttttactttatctc 3293213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 41430175 - 41430138
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  41430175 ttctctcttatactcacattatatttttactttatctc 41430138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 41989766 - 41989729
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  41989766 ttctctctcatactcacattatatttttactttctctc 41989729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Complemental strand, 43573617 - 43573584
Alignment:
Q  286 tttgagaaatgatatttgaacatctatttagtga 319  Q
    ||||||||||||||||||||||||||||| ||||    
T  43573617 tttgagaaatgatatttgaacatctattttgtga 43573584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 45420120 - 45420047
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||| ||||||  ||| ||  ||||||||||||  ||||||||  ||||||||| ||||    
T  45420120 gagaaatgatatttgaacaactattttttgacaactttctctctcatattcacattatcattttactttctctc 45420047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 361
Target Start/End: Original strand, 20337358 - 20337394
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatct 361  Q
    ||||||||||||  |||||||||||||||||||||||    
T  20337358 ttctctctcatattcacattatatttttactttatct 20337394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 362
Target Start/End: Complemental strand, 36352607 - 36352571
Alignment:
Q  326 tctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||  |||||||||||||||||||||||    
T  36352607 tctctctcatacttacattatatttttactttatctc 36352571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 33358218 - 33358145
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||||| |||| |||| ||  ||||||||||||| |||||||| |||||||||||||||    
T  33358218 gagaaatgatatttgaacatccattttgtgacaactttctctctcatactcacattatttttttactttatctc 33358145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 44632540 - 44632612
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||||| |||| |||| ||  ||||||||||||| |||||||| |||||||||||||||    
T  44632540 gagaaatgatatttgaacatccatttggtgacaactttctctctcatactcacattat-tttttactttatctc 44632612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 48220203 - 48220131
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||||| |||| |||| ||  ||||||||||||| |||||||| |||||||||||||||    
T  48220203 gagaaatgatatttgaacatccattttgtgacaactttctctctcatactcacattat-tttttactttatctc 48220131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 360
Target Start/End: Original strand, 8200087 - 8200157
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatc 360  Q
    ||||||||||||||||||||| |||| |||| ||  ||||||||||||| |||||||| |||||||||||||    
T  8200087 gagaaatgatatttgaacatccattttgtgacaactttctctctcatactcacattat-tttttactttatc 8200157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 47398511 - 47398438
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||||  ||||  ||| ||| ||||||||||||| |||||||| |||| ||||||||||    
T  47398511 gagaaatgatatttgaacattcattttttgacaattttctctctcatactcacattatgttttcactttatctc 47398438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 362
Target Start/End: Original strand, 36494472 - 36494547
Alignment:
Q  286 tttgagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||| |||||||||||||||||| ||||||||| ||  ||||||||||||| || ||||| |||| ||||||||||    
T  36494472 tttgataaatgatatttgaacatccatttagtgacaactttctctctcatactcatattat-ttttcactttatctc 36494547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 289 - 361
Target Start/End: Complemental strand, 49241564 - 49241493
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatct 361  Q
    ||||||||||||||||||||| | || |||| ||  ||||||||||||| |||||||| ||||||||||||||    
T  49241564 gagaaatgatatttgaacatccactttgtgacaactttctctctcatactcacattat-tttttactttatct 49241493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 362
Target Start/End: Original strand, 18336157 - 18336230
Alignment:
Q  288 tgagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||||||||||||||||  |||| |||| ||  ||||||||||||| |||||||  |||||||||||||||    
T  18336157 tgagaaatgatatttgaacattcattttgtgacaactttctctctcatactcacatta-gtttttactttatctc 18336230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 361
Target Start/End: Complemental strand, 41507255 - 41507182
Alignment:
Q  288 tgagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatct 361  Q
    |||||||||||||||| ||| | |||| |||| ||  ||||||||||||| |||||||| || |||||||||||    
T  41507255 tgagaaatgatatttgtacaaccattttgtgacaactttctctctcatactcacattatgttcttactttatct 41507182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 50781629 - 50781557
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||||| ||||  ||| ||  ||||||||||||| |||||||  |||||||||||||||    
T  50781629 gagaaatgatatttgaacatccattttatgacaactttctctctcatactcacatta-ctttttactttatctc 50781557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 362
Target Start/End: Complemental strand, 19969620 - 19969549
Alignment:
Q  290 agaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||||||||||||||| ||||  ||| ||  ||||||||||||| |||||||  |||||||||||||||    
T  19969620 agaaatgatatttgaacatccattttatgacaactttctctctcatactcacatta-ctttttactttatctc 19969549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 362
Target Start/End: Complemental strand, 50882168 - 50882097
Alignment:
Q  290 agaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||||||||||||||  |||| |||| ||| ||||||||||||   ||||||| |||||||||||||||    
T  50882168 agaaatgatatttgaacattcattttgtgacaattttctctctcatatttacattat-tttttactttatctc 50882097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 361
Target Start/End: Original strand, 52437542 - 52437578
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatct 361  Q
    ||||||||||||| |||||||||||||||||||||||    
T  52437542 ttctctctcatactcacattatatttttactttatct 52437578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 319
Target Start/End: Complemental strand, 1853027 - 1852992
Alignment:
Q  284 aatttgagaaatgatatttgaacatctatttagtga 319  Q
    |||| |||||||||||||||||||||||||||||||    
T  1853027 aattagagaaatgatatttgaacatctatttagtga 1852992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 349
Target Start/End: Complemental strand, 45065960 - 45065901
Alignment:
Q  290 agaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatt 349  Q
    |||||||||||||||||||| |||| |||| ||  ||||||||||||| ||||| |||||    
T  45065960 agaaatgatatttgaacatccattttgtgacaactttctctctcatactcacatcatatt 45065901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 902638 - 902668
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtga 319  Q
    |||||||||||||||||||||||||||||||    
T  902638 gagaaatgatatttgaacatctatttagtga 902668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 362
Target Start/End: Original strand, 12798586 - 12798632
Alignment:
Q  316 gtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||| ||| |||||| |||||| ||||||||||||||||||||||||    
T  12798586 gtgacaattttctctttcatactcacattatatttttactttatctc 12798632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 346
Target Start/End: Complemental strand, 32319369 - 32319311
Alignment:
Q  288 tgagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattat 346  Q
    ||||||||||||||| |||||| |||| |||| ||  ||||||||||||| ||||||||    
T  32319369 tgagaaatgatatttaaacatccatttggtgacaactttctctctcatactcacattat 32319311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 33024642 - 33024612
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtga 319  Q
    |||||||||||||||||||||||||||||||    
T  33024642 gagaaatgatatttgaacatctatttagtga 33024612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 353
Target Start/End: Original strand, 40139120 - 40139190
Alignment:
Q  283 taatttgagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatattttta 353  Q
    |||| |||||||||||||||| ||| | ||||  ||| ||  ||||||||||||| |||||||||||||||    
T  40139120 taatatgagaaatgatatttgtacaaccattttatgacaactttctctctcatactcacattatattttta 40139190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 355
Target Start/End: Complemental strand, 40596114 - 40596048
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttact 355  Q
    ||||||||||||||| ||| | |||| |||| ||  ||||||||||||| ||||||||||| |||||    
T  40596114 gagaaatgatatttgtacaaccattttgtgacaactttctctctcatactcacattatattcttact 40596048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 611695 - 611622
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||||||||||||||   |||| | || ||| |||||||||| |  ||||| ||||||||||||||||||    
T  611695 gagaaatgatatttgaacaatcattttgggataattttctctctcaaattcacataatatttttactttatctc 611622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 740979 - 740942
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  740979 ttctctctcatactcacattatatttttactttctctc 740942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Original strand, 30536039 - 30536076
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  30536039 ttctctctcatactcacattatatttttactttctctc 30536076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Original strand, 49931601 - 49931638
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  49931601 ttctctctcatattcacattatatttttactttatctc 49931638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 50775180 - 50775143
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  50775180 ttctctctcatactcacattatgtttttactttatctc 50775143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 357
Target Start/End: Complemental strand, 12999846 - 12999814
Alignment:
Q  325 ttctctctcatacacacattatatttttacttt 357  Q
    ||||||||||||| |||||||||||||||||||    
T  12999846 ttctctctcatactcacattatatttttacttt 12999814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 319
Target Start/End: Complemental strand, 21486390 - 21486358
Alignment:
Q  287 ttgagaaatgatatttgaacatctatttagtga 319  Q
    |||||||||||||||||||||||||||| ||||    
T  21486390 ttgagaaatgatatttgaacatctatttggtga 21486358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 353
Target Start/End: Complemental strand, 27687579 - 27687515
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatattttta 353  Q
    ||||||||||||||| ||| | |||| |||| ||  || |||||||||| |||||||||||||||    
T  27687579 gagaaatgatatttgtacaaccattttgtgacaactttatctctcatactcacattatattttta 27687515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 362
Target Start/End: Complemental strand, 50239227 - 50239151
Alignment:
Q  286 tttgagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||||||||||||  ||| | |||| |||| ||| || |||||||||| |||||||  |||||||||| ||||    
T  50239227 tttgagaaatgatattttgacaaccattttgtgacaattttatctctcatactcacattaattttttactttctctc 50239151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 289 - 351
Target Start/End: Complemental strand, 39312675 - 39312613
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttt 351  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||||| |||||||| ||||    
T  39312675 gagaaatgatatttgaacatctatttagtgacaactttctctctcatactcacattatttttt 39312613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 28657500 - 28657428
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||||| |||| |||| ||  ||||||||||||| |||||||| |||||||||||||||    
T  28657500 gagaaatgatatttgaacatccattttgtgacaactttctctctcatactcacattat-tttttactttatctc 28657428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 43769723 - 43769795
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||||| |||| |||| ||  ||||||||||||| |||||||| |||||||||||||||    
T  43769723 gagaaatgatatttgaacatccattttgtgacaactttctctctcatactcacattat-tttttactttatctc 43769795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 26718380 - 26718452
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||||| ||||  ||| ||| ||||||||||||| |||||||  |||||||||||||||    
T  26718380 gagaaatgatatttgaacatccattttatgacaattttctctctcatactcacatta-ctttttactttatctc 26718452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 26731008 - 26731080
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||||| ||||  ||| ||| ||||||||||||| |||||||  |||||||||||||||    
T  26731008 gagaaatgatatttgaacatccattttatgacaattttctctctcatactcacatta-ctttttactttatctc 26731080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 31657658 - 31657730
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||||| |||| |||| ||  ||||||||||||| |||||||  |||||||||||||||    
T  31657658 gagaaatgatatttgaacatccattttgtgacaactttctctctcatactcacatta-ctttttactttatctc 31657730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 53405888 - 53405817
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||||| |||||||||| | |||||||||||||| ||||| || ||||||| |||||||    
T  53405888 gagaaatgatatttgaacatcaatttagtgaata-cttctctctcatactcacataat-tttttacattatctc 53405817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 362
Target Start/End: Original strand, 42667217 - 42667289
Alignment:
Q  288 tgagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||||||||||| |||| ||| ||||||| ||||  |||||   ||||||||||||||||    
T  42667217 tgagaaatgatatttgaacatctattttgtgataattttctctcacatattcacat--catttttactttatctc 42667289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 351
Target Start/End: Complemental strand, 55601760 - 55601698
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttt 351  Q
    |||||| |||||||||||||||||||  ||| ||  ||||||||||||| |||||||||||||    
T  55601760 gagaaaagatatttgaacatctattttatgacaactttctctctcatactcacattatatttt 55601698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 12138864 - 12138937
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||||  |||| |||| ||  ||||||||  ||| |||||||| |||||||||||||||    
T  12138864 gagaaatgatatttgaacatgaattttgtgacaacgttctctcttctactcacattatttttttactttatctc 12138937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 13389476 - 13389439
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||| |||||||||||||||||||||||||||||    
T  13389476 ttctctcttatacacacattatatttttactttatctc 13389439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 37066000 - 37066072
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||| |||||||| |||| ||  || ||| |||||| |||||||| |||||||||||||||    
T  37066000 gagaaatgatatttgaatatctatttggtgataactttttctttcatactcacattat-tttttactttatctc 37066072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 362
Target Start/End: Complemental strand, 52846285 - 52846214
Alignment:
Q  290 agaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||| |||||||||||  ||| ||  ||||||||||||| |||||||  |||||||||||||||    
T  52846285 agaaatgatatttaaacatctattttatgacaactttctctctcatactcacatta-ctttttactttatctc 52846214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 624383 - 624353
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtga 319  Q
    |||||||||||||||||||||||||||||||    
T  624383 gagaaatgatatttgaacatctatttagtga 624353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 328 - 362
Target Start/End: Complemental strand, 1796002 - 1795968
Alignment:
Q  328 tctctcatacacacattatatttttactttatctc 362  Q
    |||||||||| ||||||||||||||||||||||||    
T  1796002 tctctcatactcacattatatttttactttatctc 1795968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 4949518 - 4949589
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||||  |||| |||| ||  ||||||||||||| |||||   ||||||||||||||||    
T  4949518 gagaaatgatatttgaacattcatttggtgacaactttctctctcatactcacat--catttttactttatctc 4949589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 324 - 362
Target Start/End: Complemental strand, 19232158 - 19232120
Alignment:
Q  324 cttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  19232158 cttctctctcatactcacattatatttttactttctctc 19232120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 362
Target Start/End: Original strand, 31559577 - 31559623
Alignment:
Q  316 gtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||| ||| ||||||||||||| ||||||||||||||||||| ||||    
T  31559577 gtgacaattttctctctcatactcacattatatttttactttctctc 31559623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 328 - 362
Target Start/End: Complemental strand, 49372333 - 49372299
Alignment:
Q  328 tctctcatacacacattatatttttactttatctc 362  Q
    |||||||||| ||||||||||||||||||||||||    
T  49372333 tctctcatactcacattatatttttactttatctc 49372299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 324 - 362
Target Start/End: Original strand, 50980637 - 50980675
Alignment:
Q  324 cttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  50980637 cttctctctcatactcacattatatttttactttctctc 50980675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 357
Target Start/End: Original strand, 4974110 - 4974179
Alignment:
Q  288 tgagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttacttt 357  Q
    |||||||||||||||| ||| ||||||  | | ||  ||||||||||||| ||||||| |||||||||||    
T  4974110 tgagaaatgatatttgtacaactattttttaacaactttctctctcatacccacattaaatttttacttt 4974179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 336
Target Start/End: Complemental strand, 28868706 - 28868658
Alignment:
Q  287 ttgagaaatgatatttgaacatctatttagtgaaaatcttctctctcata 336  Q
    ||||||||| ||||||||||||||||||| ||| ||| ||||||||||||    
T  28868706 ttgagaaatcatatttgaacatctattta-tgataattttctctctcata 28868658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 38792913 - 38792876
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  38792913 ttctctctcatactcacattatatttttactttctctc 38792876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 44257753 - 44257716
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  44257753 ttctctctcatactcacattatatttttactttctctc 44257716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Original strand, 49585042 - 49585079
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  49585042 ttctctctcatactcacattatatttttactttctctc 49585079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Original strand, 51930874 - 51930911
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  51930874 ttctctctcatactcacattatatttttactttctctc 51930911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 362
Target Start/End: Original strand, 5386385 - 5386457
Alignment:
Q  290 agaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||||||||||||| | ||||  ||| ||  ||||||||||||| ||||||||  ||||||||| ||||    
T  5386385 agaaatgatatttgaacaaccattttttgacaactttctctctcatactcacattattcttttactttctctc 5386457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 30439565 - 30439493
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||||| |||| |||| ||  ||||||||||||| |||||||| |||||||||||||||    
T  30439565 gagaaatgatatttgaacatccattttgtgacaactttctctctcatactcacattat-tttttactttatctc 30439493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 287 - 362
Target Start/End: Original strand, 28646681 - 28646756
Alignment:
Q  287 ttgagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||| |||||||||||||||||||||||  ||| ||  ||||||||||||| ||||| || |||||||||||||||    
T  28646681 ttgataaatgatatttgaacatctatttgatgacaactttctctctcatactcacataatttttttactttatctc 28646756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 287 - 362
Target Start/End: Original strand, 28651265 - 28651340
Alignment:
Q  287 ttgagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||| |||||||||||||||||||||||  ||| ||  ||||||||||||| ||||| || |||||||||||||||    
T  28651265 ttgataaatgatatttgaacatctatttgatgacaactttctctctcatactcacataatttttttactttatctc 28651340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 287 - 361
Target Start/End: Complemental strand, 6968294 - 6968220
Alignment:
Q  287 ttgagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatct 361  Q
    ||||||||||||||||||||||| || | |||| ||  ||||||||||||| |||||||  ||||||||||||||    
T  6968294 ttgagaaatgatatttgaacatcaatctggtgacaactttctctctcatactcacattacttttttactttatct 6968220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 7586221 - 7586149
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||||||||||||||||||||| |||| ||  |||| | |||||| |||||||| |||||||||||||||    
T  7586221 gagaaatgatatttgaacatctatttggtgacaactttctttttcatactcacattat-tttttactttatctc 7586149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 289 - 349
Target Start/End: Original strand, 37657001 - 37657061
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatt 349  Q
    ||||||||||||||||||||| ||||||||| ||  ||||||||||||| ||||| |||||    
T  37657001 gagaaatgatatttgaacatccatttagtgacaactttctctctcatactcacatcatatt 37657061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 41541869 - 41541941
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||||| |||| |||| ||  |||||||| |||| |||||||| |||||| ||||||||    
T  41541869 gagaaatgatatttgaacatccattttgtgacaactttctctcttatactcacattat-tttttattttatctc 41541941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 41639859 - 41639786
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||| ||||| ||||  | | ||| || |||||||||| ||||||||||||||||||| ||||    
T  41639859 gagaaatgatatttgtacatccattttctaacaattttttctctcatactcacattatatttttactttctctc 41639786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 2732982 - 2733014
Alignment:
Q  283 taatttgagaaatgatatttgaacatctattta 315  Q
    |||||||||||||||||||||||||||||||||    
T  2732982 taatttgagaaatgatatttgaacatctattta 2733014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 362
Target Start/End: Complemental strand, 22706301 - 22706228
Alignment:
Q  288 tgagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||||||||||||| ||| ||||||||| ||  || |||||||||| |||||| | |||| ||||||||||    
T  22706301 tgagaaatgatatttgaatatccatttagtgacaactttatctctcatactcacattgt-ttttaactttatctc 22706228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 361
Target Start/End: Original strand, 157070 - 157139
Alignment:
Q  292 aaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatct 361  Q
    |||||||||||| ||| | |||| | || ||  |||||||||||||  ||||||||||||||||||||||    
T  157070 aaatgatatttgtacaaccattttgcgacaactttctctctcatacttacattatatttttactttatct 157139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Original strand, 6440129 - 6440166
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  6440129 ttctctctcatactcacattatatttttactttctctc 6440166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 8671579 - 8671542
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  8671579 ttctctctcatactcgcattatatttttactttatctc 8671542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 25830269 - 25830232
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  25830269 ttctctctcatactcacattatatttttactttctctc 25830232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Original strand, 35067208 - 35067245
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  35067208 ttctctctcatactcacattatatttttactttctctc 35067245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 322
Target Start/End: Original strand, 36110138 - 36110171
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaa 322  Q
    ||||||||||||||||||||| ||||||||||||    
T  36110138 gagaaatgatatttgaacatccatttagtgaaaa 36110171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Original strand, 38675651 - 38675688
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  38675651 ttctctctcatacccacattatatttttactttctctc 38675688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 43285986 - 43285949
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  43285986 ttctctctcatactcacattatatttttactttctctc 43285949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Original strand, 43715922 - 43715959
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  43715922 ttctctctcatactcacattatatttttactttctctc 43715959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 319
Target Start/End: Complemental strand, 1633963 - 1633931
Alignment:
Q  287 ttgagaaatgatatttgaacatctatttagtga 319  Q
    ||||||||||||||||||||||| |||||||||    
T  1633963 ttgagaaatgatatttgaacatccatttagtga 1633931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 357
Target Start/End: Complemental strand, 24798381 - 24798349
Alignment:
Q  325 ttctctctcatacacacattatatttttacttt 357  Q
    ||||||||||||| |||||||||||||||||||    
T  24798381 ttctctctcatactcacattatatttttacttt 24798349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 349
Target Start/End: Complemental strand, 35356227 - 35356167
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatt 349  Q
    ||||||||||||||||||||  |||| |||| ||  ||||||||||||| ||||| |||||    
T  35356227 gagaaatgatatttgaacattcattttgtgataactttctctctcatacccacatcatatt 35356167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 319
Target Start/End: Complemental strand, 38708369 - 38708337
Alignment:
Q  287 ttgagaaatgatatttgaacatctatttagtga 319  Q
    |||||||||||||||||||||||||||| ||||    
T  38708369 ttgagaaatgatatttgaacatctatttggtga 38708337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 362
Target Start/End: Original strand, 39211054 - 39211126
Alignment:
Q  290 agaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||||||||||||| | ||||  ||| ||  ||||||||||||| |||||| | |||||||||| ||||    
T  39211054 agaaatgatatttgaacaaccattttttgacaactttctctctcatactcacattttgtttttactttttctc 39211126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 357
Target Start/End: Original strand, 43419879 - 43419947
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttacttt 357  Q
    ||||||||||||||| ||| ||| || |||| ||| |||||||| ||||  ||||||| ||||||||||    
T  43419879 gagaaatgatatttgtacaactaatttgtgacaattttctctcttatacttacattatgtttttacttt 43419947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 45504601 - 45504641
Alignment:
Q  317 tgaaaatcttctctctcatacacacattatatttttacttt 357  Q
    ||||||| |||||| |||||| |||||||||||||||||||    
T  45504601 tgaaaattttctctatcatactcacattatatttttacttt 45504641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 49761319 - 49761391
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||||| |||| |||| ||  ||||||||||||| |||||||| |||||||||||||||    
T  49761319 gagaaatgatatttgaacatccattttgtgacaactttctctctcatactcacattat-tttttactttatctc 49761391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 54195351 - 54195424
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||||| ||||||||| ||  |||||| | |||| |||||||| |||||||||||||||    
T  54195351 gagaaatgatatttgaacatccatttagtgacaactttctcttttatactcacattatttttttactttatctc 54195424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 361
Target Start/End: Complemental strand, 1337899 - 1337827
Alignment:
Q  288 tgagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatct 361  Q
    |||||||||||||||||||||| ||||  ||| ||| |||| |||||||| |||||||| ||||||||||||||    
T  1337899 tgagaaatgatatttgaacatccattttatgacaattttctatctcatactcacattat-tttttactttatct 1337827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 362
Target Start/End: Original strand, 49167798 - 49167835
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||||||||||||||||||||||    
T  49167798 ttctctctcatacacacattatatttttactttatctc 49167835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 39907607 - 39907536
Alignment:
Q  287 ttgagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttat 359  Q
    |||||||||||||||||||||| |||||| ||| ||  || |||||||||| |||||||| ||||||||||||    
T  39907607 ttgagaaatgatatttgaacatttatttaatgataactttttctctcatactcacattat-tttttactttat 39907536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 26672412 - 26672482
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||||  |||| |||| || |||||||||||||| |||||  |||||||||||||||||    
T  26672412 gagaaatgatatttgaacattcattttgtgacaa-cttctctctcatactcacat--tatttttactttatctc 26672482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 3281775 - 3281703
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||||||||||||||| ||||| |||| ||  |||||||| |||| |||||||  |||||||||||||||    
T  3281775 gagaaatgatatttgaacatttattttgtgacaactttctctcttatactcacatta-ctttttactttatctc 3281703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 21005235 - 21005163
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||||||||||||||||||||| |||| ||  |||||||| |||| ||| |||  |||||||||||||||    
T  21005235 gagaaatgatatttgaacatctattttgtgacaactttctctcttatactcacgtta-ctttttactttatctc 21005163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 21195914 - 21195877
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||||||||||| |||||||||||||||||||||    
T  21195914 ttctctctcatacacatattatatttttactttatctc 21195877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 362
Target Start/End: Original strand, 45205284 - 45205361
Alignment:
Q  285 atttgagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||| ||| |||||| |||| ||| || ||||||||||  | |||||||||||| ||| ||||    
T  45205284 atttgagaaatgatatttgtacaactattttgtgacaattttttctctcatacttaaattatatttttaatttctctc 45205361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 51465973 - 51465901
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||||||||||||||||||||| ||||  |  ||||||||||||| || ||||  |||||||||||||||    
T  51465973 gagaaatgatatttgaacatctattttgtgaccactttctctctcatactcatatta-ctttttactttatctc 51465901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 362
Target Start/End: Complemental strand, 44813470 - 44813434
Alignment:
Q  326 tctctctcatacacacattatatttttactttatctc 362  Q
    |||||||||||| ||||||||||||||||||||||||    
T  44813470 tctctctcatactcacattatatttttactttatctc 44813434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 319
Target Start/End: Complemental strand, 46982974 - 46982943
Alignment:
Q  288 tgagaaatgatatttgaacatctatttagtga 319  Q
    ||||||||||||||||||||||||||||||||    
T  46982974 tgagaaatgatatttgaacatctatttagtga 46982943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 319
Target Start/End: Original strand, 8821630 - 8821660
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtga 319  Q
    |||||||||||||||||||||||||||||||    
T  8821630 gagaaatgatatttgaacatctatttagtga 8821660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 27541539 - 27541489
Alignment:
Q  312 tttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||| ||| ||||||||||||| |||||||| |||||||||| ||||    
T  27541539 tttagtgacaattttctctctcatactcacattatctttttactttctctc 27541489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 39671169 - 39671139
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtga 319  Q
    |||||||||||||||||||||||||||||||    
T  39671169 gagaaatgatatttgaacatctatttagtga 39671139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 26452746 - 26452709
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  26452746 ttctctctcatactcacattatatttttactttctctc 26452709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 28700472 - 28700545
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||| | ||||  ||| ||  || |||||||||| |||||||| |||||||||| ||||    
T  28700472 gagaaatgatatttgaacaaccattttttgacaactttatctctcatactcacattatgtttttactttctctc 28700545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 32421688 - 32421616
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||||||||||||||  | | ||  ||||||||||||| || || || |||||||||||||||    
T  32421688 gagaaatgatatttgaacatctatttgataataactttctctctcatactcatatcat-tttttactttatctc 32421616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 361
Target Start/End: Original strand, 34662057 - 34662090
Alignment:
Q  328 tctctcatacacacattatatttttactttatct 361  Q
    |||||||||| |||||||||||||||||||||||    
T  34662057 tctctcatactcacattatatttttactttatct 34662090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 42358662 - 42358625
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  42358662 ttctctctcatactcacattatctttttactttatctc 42358625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 48176874 - 48176837
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  48176874 ttctttctcatactcacattatatttttactttatctc 48176837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Original strand, 52485520 - 52485557
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  52485520 ttctctgtcatactcacattatatttttactttatctc 52485557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 54007475 - 54007548
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||  ||| |||||| ||   ||| ||||||||||||| |||||| |||||||| ||||||||    
T  54007475 gagaaatgatatttctacaactattttgtagcaattttctctctcatactcacattttatttttattttatctc 54007548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 353
Target Start/End: Original strand, 1765404 - 1765468
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatattttta 353  Q
    ||||||||||||||| ||||  |||| |||| ||  ||||||||||||| |||||||| ||||||    
T  1765404 gagaaatgatatttgtacattcattttgtgacaactttctctctcatacgcacattatgttttta 1765468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 362
Target Start/End: Original strand, 11234200 - 11234275
Alignment:
Q  286 tttgagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||||||||||||||||||| ||||| ||| ||  || |||||||| | ||| |||| |||||| ||||||||    
T  11234200 tttgagaaatgatatttgaacatccatttactgacaactttttctctcattctcacgttat-tttttattttatctc 11234275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 357
Target Start/End: Complemental strand, 29917047 - 29917015
Alignment:
Q  325 ttctctctcatacacacattatatttttacttt 357  Q
    ||||||||||||| |||||||||||||||||||    
T  29917047 ttctctctcatactcacattatatttttacttt 29917015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 357
Target Start/End: Complemental strand, 29966200 - 29966168
Alignment:
Q  325 ttctctctcatacacacattatatttttacttt 357  Q
    ||||||||||||| |||||||||||||||||||    
T  29966200 ttctctctcatactcacattatatttttacttt 29966168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 361
Target Start/End: Original strand, 48893354 - 48893426
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatct 361  Q
    |||||||||||||| |||||  ||||  ||| ||| || |||||||||| |||||||| |||||| |||||||    
T  48893354 gagaaatgatatttaaacattcattttttgacaattttttctctcatactcacattatttttttattttatct 48893426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 319
Target Start/End: Complemental strand, 49363324 - 49363292
Alignment:
Q  287 ttgagaaatgatatttgaacatctatttagtga 319  Q
    ||||||||||||||||||||||| |||||||||    
T  49363324 ttgagaaatgatatttgaacatccatttagtga 49363292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 319
Target Start/End: Complemental strand, 50638422 - 50638390
Alignment:
Q  287 ttgagaaatgatatttgaacatctatttagtga 319  Q
    |||||||||||||||||||||||||||| ||||    
T  50638422 ttgagaaatgatatttgaacatctatttggtga 50638390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 355
Target Start/End: Original strand, 32644622 - 32644689
Alignment:
Q  288 tgagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttact 355  Q
    |||||||||||||||| ||| ||||||  ||| ||  ||||||||||||| |||||||||||||||||    
T  32644622 tgagaaatgatatttgtacaactattttttgacaactttctctctcatactcacattatatttttact 32644689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 362
Target Start/End: Complemental strand, 14699717 - 14699651
Alignment:
Q  295 tgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||||| |||| |||| ||  |||| |||||||| |||||||| |||||||||||||||    
T  14699717 tgatatttgaacatccattttgtgataactttctttctcatactcacattat-tttttactttatctc 14699651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 362
Target Start/End: Complemental strand, 14693308 - 14693239
Alignment:
Q  292 aaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||||||||||||| |||| |||| ||  |||||| | |||| |||||||| |||||||||||||||    
T  14693308 aaatgatatttgaacatccattttgtgataactttctctttgatactcacattat-tttttactttatctc 14693239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 30036865 - 30036835
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtga 319  Q
    |||||||||||||||||||||||||||||||    
T  30036865 gagaaatgatatttgaacatctatttagtga 30036835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Original strand, 1376412 - 1376449
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  1376412 ttctctcttatactcacattatatttttactttatctc 1376449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Original strand, 1384160 - 1384197
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  1384160 ttctctcttatactcacattatatttttactttatctc 1384197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 362
Target Start/End: Complemental strand, 5028325 - 5028253
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttactttatctc 362  Q
    |||||||||||||| |||||| |||| |||| ||  |||||||| |||| |||||||  |||||||||||||||    
T  5028325 gagaaatgatatttaaacatccattttgtgacaactttctctcttatactcacatta-ctttttactttatctc 5028253  T

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Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 355
Target Start/End: Original strand, 12177574 - 12177643
Alignment:
Q  286 tttgagaaatgatatttgaacatctatttagtgaaaatcttctctctcatacacacattatatttttact 355  Q
    ||||||||||| |||||| ||| |||||| |||| ||  |||||| |||||| ||||||||||| |||||    
T  12177574 tttgagaaatgttatttgtacaactattttgtgacaactttctctttcatactcacattatattcttact 12177643  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Original strand, 13423016 - 13423053
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  13423016 ttctctctcatactcacattatatttttactttctctc 13423053  T

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Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 16337946 - 16337909
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  16337946 ttctctctcatactcacattatatttttactttctctc 16337909  T

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Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 17551402 - 17551365
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  17551402 ttctctctcatactcacattatgtttttactttatctc 17551365  T

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Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 23653917 - 23653880
Alignment:
Q  325 ttctctctcatacacacattatatttttactttatctc 362  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  23653917 ttctctctcatactcacattatatttttactttctctc 23653880  T

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Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 337
Target Start/End: Original strand, 28748124 - 28748172
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatac 337  Q
    ||||||||||||||||||||| |||| |||| ||  |||||||||||||    
T  28748124 gagaaatgatatttgaacatccattttgtgacaactttctctctcatac 28748172  T

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Target: scaffold0471 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 322
Target Start/End: Original strand, 7 - 40
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaa 322  Q
    ||||||||||||||||||||| ||||||||||||    
T  7 gagaaatgatatttgaacatccatttagtgaaaa 40  T

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Target: scaffold0449 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 315
Target Start/End: Original strand, 9200 - 9229
Alignment:
Q  286 tttgagaaatgatatttgaacatctattta 315  Q
    ||||||||||||||||||||||||||||||    
T  9200 tttgagaaatgatatttgaacatctattta 9229  T

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Target: scaffold0100 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 337
Target Start/End: Original strand, 44786 - 44834
Alignment:
Q  289 gagaaatgatatttgaacatctatttagtgaaaatcttctctctcatac 337  Q
    ||||||||||||||||||||| |||| |||| ||  |||||||||||||    
T  44786 gagaaatgatatttgaacatccattttgtgacaactttctctctcatac 44834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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