View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15192_low_31 (Length: 290)
Name: NF15192_low_31
Description: NF15192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15192_low_31 |
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Alignment Details
Target: chr5 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 18 - 274
Target Start/End: Complemental strand, 1837064 - 1836808
Alignment:
| Q |
18 |
gaagagtgtttgcaagttccgggaaattgagcctggcttcacgtcccctgaaatgcaaggcagctacgtcgtatgcagccgctgccatctctggtgtctc |
117 |
Q |
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| T |
1837064 |
gaagagtgtttgcaagttccgggaaattgagcctggcttcacgtcccctgaaatgcaaggcagctacgtcgtatgcagccgctgccatctctggtgtctc |
1836965 |
T |
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| Q |
118 |
gaaacttcctaaccagattcttgttttggtgccgggctcacgaatttcggaaacccatttaccccattttctcttacggactcctctgtatgcagaacta |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1836964 |
gaaacttcctaaccagattcttgttttggtgccgggctcgcgaatttcggaaacccatttaccccattttctcttacggactcctctgtatgcagaacta |
1836865 |
T |
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| Q |
218 |
gcagcaccacttgaagacattgttcatgcaaattaagtatagtttttatcgaaatat |
274 |
Q |
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| T |
1836864 |
gcagcaccacttgaagacattgttcatgcaaattaagtatagtttttatcgaaatat |
1836808 |
T |
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