View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15192_low_38 (Length: 264)
Name: NF15192_low_38
Description: NF15192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15192_low_38 |
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Alignment Details
Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 27610908 - 27611164
Alignment:
| Q |
1 |
tatgttaaatgtttcagtaacagcaacacaaactgtagcctatagctatggatgattacactatcatccaataatgtgtacggttgattgcaggttcaag |
100 |
Q |
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| T |
27610908 |
tatgttaaatgtttcagtaaaagcaacacaaactgtagcctatagctatggatgattacactatcatccaataatgtgtacggttgattgcaggttcaag |
27611007 |
T |
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| Q |
101 |
aatattttgaaataaacaccctaaaagacgctcaacacatagcaatcaattattcacaaatgccatatacactaacacaactttttcttttcattttcat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27611008 |
aatattttgaaataaacaccctaaaagacgctcaacacatagcaatcaattattcacaaatgccatatacactaacacaactttttcttttcattttcat |
27611107 |
T |
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| Q |
201 |
aacatggcaaggcctgtgtgtgtgtagtcttcttttgctttttggctgcctttgcttct |
259 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||| |
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| T |
27611108 |
aacatggcaaggcc--tgtgtgtgtagtcttcttttgctttttggctgcttttgtttct |
27611164 |
T |
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