View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15192_low_7 (Length: 460)
Name: NF15192_low_7
Description: NF15192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15192_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 374; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 374; E-Value: 0
Query Start/End: Original strand, 1 - 446
Target Start/End: Complemental strand, 27610905 - 27610466
Alignment:
| Q |
1 |
catgcagacacacctcagacacaaggaggaggagcttctttttctctcactctttctaacggatagaaagagaaaggaagaaaaaacaaatatggtttct |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
27610905 |
catgcagacacacctcagacacaaggaggaggagcttctttttctctcactctttctaacggatagaaag------gaagaaaaaacaaatatggtttct |
27610812 |
T |
|
| Q |
101 |
gaaaactcactctcttcttccaagcactcttctactaccactacccctaaattttgcaactcttacactactaggtacttcagtaataaggctaaattac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |
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| T |
27610811 |
gaaaactcactctcttcttccaagcactcttctactaccactactcctaaattttgcaactcttacactactaggtacttcagcaataaagctaaattac |
27610712 |
T |
|
| Q |
201 |
ctcttatttatctttttgcttcttaattggttcnnnnnnnactatattatgtgtcttgttctgtattatatgagagtcttgtctttctttccttcatttt |
300 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |
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| T |
27610711 |
ctcttatttatctttttgcttcttaattggttctttttttactatattatgtgtcttgttctgtattatatgagagtcttgtctttctttacttcgtttt |
27610612 |
T |
|
| Q |
301 |
atagtagcttaaacatgtaacttatgtgcttttttataagagttaattttattcaagttctgtcttacttctgtttgtagtttgtacatttgataacttg |
400 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27610611 |
atagtaggttaaacatgtaacttatgtgcttttttataagagttaattttattcaagttctgtcttacttctgtttgtagtttgtacatttgataacttg |
27610512 |
T |
|
| Q |
401 |
gttagctagcttcaaaaggaactttttatcaaatataaatgtatgt |
446 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
27610511 |
gttagctagcttcaaaaggaactttttatcaaatataaatgcatgt |
27610466 |
T |
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