View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15193_high_2 (Length: 566)
Name: NF15193_high_2
Description: NF15193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15193_high_2 |
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Alignment Details
Target: chr3 (Bit Score: 493; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 493; E-Value: 0
Query Start/End: Original strand, 13 - 550
Target Start/End: Original strand, 37024836 - 37025368
Alignment:
| Q |
13 |
atcatcaaggtgctctatcaaaacaatcaacaaaggtagtttctcctttggattattgggggaagattgcttgttggtataagaacatgaccaacaccaa |
112 |
Q |
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| T |
37024836 |
atcatcaaggtgctctatcaaaacaatcaacaaaggtagtttctcctttggattattgggggaagattgcttgttggtataagaacatgaccaacaccaa |
37024935 |
T |
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| Q |
113 |
cattggtcatgttgtatatgacatgatgcacccccaaaatattgtgttggtgaaaattttcaatgacatttcgtttatcttattaataaacataactaaa |
212 |
Q |
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| T |
37024936 |
cattggtcatgttgtatatgacatgatgcacccccaaaatattgtgttggtgaaaattttcaatgacatttcgtttatcttattaataaacataactaaa |
37025035 |
T |
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| Q |
213 |
cgtacgttttcaatattctcatacatatacttgaacttaacaacaaaaagagataaacgtgggaatagacagagtgctttggttattgatcggataccaa |
312 |
Q |
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| T |
37025036 |
cgt----tttcaatattctcatacatatacttgaacttaacaacaaaaagagataaacgtgggaatagacagagtgctttggttattgatcgaataccaa |
37025131 |
T |
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| Q |
313 |
tattacaatatttaaaaatctccatctttgaaagacattggtagcatcacatgagcaatggggtctctcttcaccttccatttcttgaactgctttgaag |
412 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
37025132 |
tattacaatatttaaaaatctccatctttgaaagacattggtagcatcacatgagcaatggggtctctcttcaccttccatttcttgaactgttttgaag |
37025231 |
T |
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| Q |
413 |
cagctttcaatgccctgccccatctctgtatcaaatagatcccacaaccacaagttatcacaaaataattacttcaatttcaacattttactaagctaat |
512 |
Q |
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| T |
37025232 |
cagctttcaatgccctgccccatctctgtatcaaatagcacccacaaccacaagttatcac-caataattacttcaatttcaacattttactaagctaat |
37025330 |
T |
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| Q |
513 |
caattcaattaatctacataaaaatctcaacaatagta |
550 |
Q |
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| T |
37025331 |
caattcaattaatctacataaaaatctcaacaatagta |
37025368 |
T |
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