View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15193_high_9 (Length: 325)
Name: NF15193_high_9
Description: NF15193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15193_high_9 |
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Alignment Details
Target: chr3 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 1 - 307
Target Start/End: Original strand, 45710252 - 45710558
Alignment:
| Q |
1 |
tgaaagaatgactgttaggttaggtaggacctacaaggaggccaaagttgaagccaacgatgacggtattggcgatggaaatggaagcgagttgaacgtc |
100 |
Q |
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| T |
45710252 |
tgaaagaatgactgttaggttaggtaggacctacaaggaggccaaaattgaagccaacgatgacggtattggcgatggaaatggaagcgagttgaacgtc |
45710351 |
T |
|
| Q |
101 |
gccaaggtgaccggcaaaggcttgagtaacgacgttcatggtgaaagatgcgacgcggctgaaaatagagggaccaactatgtgccatagtttcttcgtt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45710352 |
accaaggtgaccggcaaaggcttgagtaacgacgttcatggtgaaagatgcgacgcggctgaaaatagagggaccaactatgtgccatagtttcttcgtt |
45710451 |
T |
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| Q |
201 |
tcaatccatagtttcttgccaaattcttgttcatcatcatcctcatgttgatgttcgttaatggtagatatttcttttgacaagagagattgtataagat |
300 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45710452 |
tcaaaccatagtttcttgccaaattcttgttcatcatcatcctcatgttgatgtttgttaatggtagatatttcttttgacaagagagattgtataagat |
45710551 |
T |
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| Q |
301 |
tgtgatc |
307 |
Q |
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||||||| |
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| T |
45710552 |
tgtgatc |
45710558 |
T |
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