View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15194_high_5 (Length: 323)
Name: NF15194_high_5
Description: NF15194
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15194_high_5 |
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Alignment Details
Target: chr6 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 8 - 309
Target Start/End: Original strand, 26216409 - 26216710
Alignment:
| Q |
8 |
agattattctcaaagatgagcattgctatcagtaaatatgcctccacaggataatgatacattggtggctgcaacatcagtgttgcactagatccaacca |
107 |
Q |
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| T |
26216409 |
agattattatcaaagatgagcattgctatcaggaaagatgcctccacaggataatgatacattggtggctgcaacatcagtgttgcactcgatccaacca |
26216508 |
T |
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| Q |
108 |
actataggtcgatgccagagaacctctttaatgagaggggccttaggaagatgtatgtcgatgttgaactttttaatgatgataaagtccctaatggaag |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26216509 |
actataggtcgatgccagagaacctctttaatgagaggggccttaggaagatgtatgtcgatgttgaactttttaatgatgataaagtccctaatggaag |
26216608 |
T |
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| Q |
208 |
aggttgtagtatgctttctatcatagatattgcaaacttttaggatgtttgcttattgttaaatcttagaggatatccatagtaccaaatagcagaggtg |
307 |
Q |
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| T |
26216609 |
aagttgtagtatgctttctatcatagatattgcaaacttttaggatgtttgcttattgttaaatcttagaggatatccatagtaccaaatagcagaggtg |
26216708 |
T |
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| Q |
308 |
at |
309 |
Q |
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|| |
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| T |
26216709 |
at |
26216710 |
T |
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