View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15195_high_28 (Length: 356)

Name: NF15195_high_28
Description: NF15195
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15195_high_28
NF15195_high_28
[»] chr1 (79 HSPs)
chr1 (94-233)||(10577676-10577814)
chr1 (235-341)||(4428704-4428810)
chr1 (78-233)||(25934574-25934745)
chr1 (78-238)||(46348319-46348478)
chr1 (94-233)||(41597411-41597549)
chr1 (6-77)||(4428638-4428709)
chr1 (127-234)||(12918957-12919064)
chr1 (127-233)||(30749852-30749958)
chr1 (127-233)||(30771303-30771409)
chr1 (135-233)||(37598852-37598949)
chr1 (107-232)||(42359391-42359516)
chr1 (162-233)||(32461394-32461465)
chr1 (78-233)||(51409983-51410143)
chr1 (107-232)||(1486646-1486776)
chr1 (135-233)||(18337349-18337447)
chr1 (96-233)||(22515828-22515964)
chr1 (135-229)||(5898211-5898305)
chr1 (107-232)||(29163323-29163448)
chr1 (78-233)||(36878419-36878584)
chr1 (163-239)||(47989556-47989632)
chr1 (133-220)||(40181889-40181976)
chr1 (107-233)||(1815249-1815375)
chr1 (135-233)||(40258874-40258972)
chr1 (7-71)||(4439868-4439932)
chr1 (163-233)||(40917808-40917878)
chr1 (135-233)||(52903269-52903364)
chr1 (107-233)||(2896062-2896188)
chr1 (163-233)||(9828103-9828173)
chr1 (133-233)||(27965941-27966039)
chr1 (129-230)||(39130711-39130812)
chr1 (169-233)||(31015091-31015155)
chr1 (171-233)||(6427531-6427593)
chr1 (135-232)||(16297223-16297322)
chr1 (115-233)||(38078602-38078720)
chr1 (115-233)||(45534131-45534248)
chr1 (6-55)||(18991211-18991260)
chr1 (92-233)||(6414932-6415082)
chr1 (133-233)||(7918155-7918252)
chr1 (133-233)||(34712324-34712424)
chr1 (133-180)||(1864874-1864921)
chr1 (162-233)||(36906055-36906125)
chr1 (163-229)||(9629834-9629900)
chr1 (133-233)||(9690214-9690313)
chr1 (135-189)||(13997903-13997957)
chr1 (135-221)||(18190061-18190147)
chr1 (167-233)||(18556386-18556452)
chr1 (163-233)||(21032265-21032335)
chr1 (129-179)||(39953141-39953191)
chr1 (198-236)||(48415664-48415702)
chr1 (133-182)||(14332634-14332683)
chr1 (133-174)||(34371731-34371772)
chr1 (133-174)||(44482248-44482289)
chr1 (133-232)||(11412709-11412809)
chr1 (136-180)||(13436479-13436523)
chr1 (185-233)||(15765828-15765876)
chr1 (163-222)||(6612112-6612171)
chr1 (133-180)||(9709838-9709885)
chr1 (134-185)||(17705576-17705626)
chr1 (115-170)||(34315712-34315767)
chr1 (163-233)||(34741894-34741964)
chr1 (133-212)||(43492456-43492535)
chr1 (183-233)||(1704936-1704986)
chr1 (163-233)||(5944342-5944412)
chr1 (191-233)||(6574053-6574095)
chr1 (152-222)||(8842666-8842736)
chr1 (78-112)||(10577814-10577848)
chr1 (105-179)||(12443456-12443529)
chr1 (154-204)||(21530728-21530778)
chr1 (135-229)||(26830608-26830701)
chr1 (163-233)||(31694640-31694710)
chr1 (78-112)||(38078735-38078769)
chr1 (133-174)||(20157350-20157391)
chr1 (135-184)||(22881606-22881655)
chr1 (105-174)||(24577186-24577255)
chr1 (133-174)||(25361904-25361945)
chr1 (78-111)||(48548042-48548075)
chr1 (193-233)||(10572535-10572575)
chr1 (162-233)||(32899937-32900009)
chr1 (197-233)||(35702543-35702579)
[»] chr3 (71 HSPs)
chr3 (78-233)||(13845466-13845612)
chr3 (107-233)||(35222930-35223056)
chr3 (132-215)||(2941575-2941658)
chr3 (135-233)||(40993276-40993374)
chr3 (78-174)||(14027961-14028066)
chr3 (78-233)||(20503430-20503583)
chr3 (135-233)||(55401095-55401193)
chr3 (135-232)||(28918021-28918120)
chr3 (133-233)||(8789489-8789591)
chr3 (135-233)||(10954972-10955073)
chr3 (6-77)||(9494846-9494917)
chr3 (150-235)||(15864868-15864952)
chr3 (135-233)||(18426969-18427067)
chr3 (105-233)||(27505236-27505369)
chr3 (163-233)||(41961580-41961650)
chr3 (163-232)||(4987222-4987291)
chr3 (139-227)||(3631708-3631796)
chr3 (151-221)||(7171537-7171607)
chr3 (176-234)||(15999950-16000008)
chr3 (163-233)||(25064966-25065036)
chr3 (133-195)||(25093520-25093582)
chr3 (133-233)||(11251996-11252094)
chr3 (81-235)||(24633341-24633498)
chr3 (133-233)||(4466541-4466641)
chr3 (133-232)||(24204983-24205082)
chr3 (137-232)||(25775531-25775624)
chr3 (135-232)||(29508464-29508567)
chr3 (7-71)||(41980862-41980926)
chr3 (7-67)||(41985636-41985696)
chr3 (134-233)||(8842348-8842447)
chr3 (94-233)||(26492146-26492284)
chr3 (170-233)||(34185053-34185116)
chr3 (163-233)||(14209172-14209242)
chr3 (135-180)||(7928470-7928515)
chr3 (115-179)||(13414469-13414533)
chr3 (169-233)||(14216957-14217021)
chr3 (169-233)||(14223086-14223150)
chr3 (164-235)||(37077418-37077490)
chr3 (113-233)||(51206294-51206414)
chr3 (7-70)||(9336548-9336611)
chr3 (163-233)||(15796224-15796294)
chr3 (133-195)||(45451571-45451633)
chr3 (82-180)||(49505148-49505245)
chr3 (107-180)||(8383249-8383322)
chr3 (16-77)||(9407383-9407444)
chr3 (16-77)||(9655395-9655456)
chr3 (149-189)||(6780404-6780444)
chr3 (7-59)||(9343853-9343905)
chr3 (169-233)||(10690193-10690257)
chr3 (135-230)||(11665964-11666070)
chr3 (163-207)||(14832158-14832202)
chr3 (135-195)||(20389636-20389694)
chr3 (133-234)||(32804484-32804581)
chr3 (16-59)||(9352918-9352961)
chr3 (162-233)||(55213020-55213091)
chr3 (78-112)||(750698-750732)
chr3 (191-233)||(4990913-4990955)
chr3 (134-180)||(11507469-11507515)
chr3 (129-175)||(38731232-38731278)
chr3 (183-233)||(40052380-40052430)
chr3 (133-194)||(7614396-7614456)
chr3 (7-56)||(9329844-9329893)
chr3 (16-77)||(9646402-9646463)
chr3 (78-111)||(17568750-17568783)
chr3 (185-233)||(1389908-1389956)
chr3 (7-59)||(9448322-9448374)
chr3 (162-233)||(25074841-25074913)
chr3 (107-171)||(26508102-26508166)
chr3 (162-233)||(27903684-27903756)
chr3 (190-234)||(34910392-34910436)
chr3 (173-233)||(49651717-49651777)
[»] chr2 (60 HSPs)
chr2 (91-233)||(24009274-24009413)
chr2 (107-233)||(20242668-20242794)
chr2 (105-233)||(36096305-36096444)
chr2 (110-232)||(2438661-2438783)
chr2 (78-233)||(41843405-41843564)
chr2 (78-233)||(37558941-37559095)
chr2 (149-233)||(28596503-28596587)
chr2 (94-233)||(34784912-34785061)
chr2 (7-71)||(20694345-20694409)
chr2 (78-233)||(38117100-38117260)
chr2 (107-233)||(18840954-18841080)
chr2 (164-233)||(26769571-26769640)
chr2 (152-233)||(34993923-34994004)
chr2 (135-226)||(5040754-5040845)
chr2 (136-215)||(5367213-5367292)
chr2 (135-221)||(12224243-12224329)
chr2 (135-233)||(15972893-15972991)
chr2 (163-233)||(30717460-30717530)
chr2 (163-233)||(35056927-35056997)
chr2 (163-233)||(37419802-37419872)
chr2 (133-230)||(37411188-37411285)
chr2 (164-232)||(19942314-19942382)
chr2 (178-233)||(18054717-18054772)
chr2 (168-233)||(11223794-11223858)
chr2 (94-174)||(18054803-18054883)
chr2 (169-233)||(42511323-42511387)
chr2 (163-233)||(32749755-32749825)
chr2 (127-180)||(20922922-20922975)
chr2 (107-227)||(21624258-21624374)
chr2 (164-233)||(27084318-27084387)
chr2 (149-233)||(34006931-34007016)
chr2 (135-180)||(34691799-34691844)
chr2 (135-180)||(34714211-34714256)
chr2 (198-234)||(18255944-18255980)
chr2 (94-166)||(21616742-21616813)
chr2 (163-234)||(23354581-23354652)
chr2 (135-195)||(30404829-30404889)
chr2 (116-208)||(43585971-43586063)
chr2 (107-174)||(15909632-15909699)
chr2 (163-233)||(22084757-22084830)
chr2 (135-214)||(31808097-31808176)
chr2 (107-173)||(11223864-11223930)
chr2 (170-232)||(15657930-15657992)
chr2 (78-112)||(21374773-21374807)
chr2 (163-232)||(23354926-23354995)
chr2 (78-112)||(26769463-26769497)
chr2 (139-221)||(29176446-29176528)
chr2 (163-233)||(44860379-44860449)
chr2 (135-180)||(19536391-19536436)
chr2 (108-184)||(31284041-31284118)
chr2 (133-174)||(44860338-44860379)
chr2 (94-230)||(6940235-6940370)
chr2 (185-233)||(10535686-10535734)
chr2 (170-222)||(14996171-14996222)
chr2 (133-173)||(18889592-18889632)
chr2 (78-110)||(27447082-27447114)
chr2 (108-168)||(28524419-28524479)
chr2 (78-110)||(31283994-31284026)
chr2 (133-173)||(38355888-38355928)
chr2 (150-190)||(40361738-40361778)
[»] chr8 (53 HSPs)
chr8 (94-233)||(43737752-43737892)
chr8 (115-233)||(3951477-3951596)
chr8 (94-233)||(34450962-34451116)
chr8 (133-232)||(3025569-3025668)
chr8 (78-233)||(36450695-36450849)
chr8 (133-233)||(33405325-33405425)
chr8 (149-232)||(926730-926813)
chr8 (132-233)||(26902105-26902217)
chr8 (78-233)||(14134663-14134817)
chr8 (133-232)||(20679337-20679436)
chr8 (78-229)||(31109463-31109613)
chr8 (133-231)||(40332209-40332307)
chr8 (164-233)||(29447040-29447109)
chr8 (91-230)||(5813569-5813707)
chr8 (163-233)||(22652035-22652105)
chr8 (163-233)||(29510234-29510304)
chr8 (133-233)||(4786279-4786379)
chr8 (133-233)||(37283756-37283851)
chr8 (152-226)||(126295-126369)
chr8 (135-233)||(18407739-18407837)
chr8 (135-233)||(31557016-31557114)
chr8 (122-233)||(18964184-18964308)
chr8 (105-179)||(13844591-13844665)
chr8 (163-233)||(15816059-15816129)
chr8 (169-233)||(8343381-8343445)
chr8 (169-233)||(16641910-16641974)
chr8 (162-234)||(24205748-24205820)
chr8 (105-181)||(31236570-31236646)
chr8 (170-233)||(6065587-6065650)
chr8 (163-233)||(21465471-21465541)
chr8 (163-233)||(28745557-28745627)
chr8 (163-233)||(29447503-29447573)
chr8 (133-179)||(34897103-34897149)
chr8 (128-233)||(24413500-24413605)
chr8 (149-221)||(8293859-8293931)
chr8 (174-222)||(22943301-22943349)
chr8 (150-233)||(39820464-39820546)
chr8 (170-233)||(4673355-4673418)
chr8 (162-233)||(11803317-11803388)
chr8 (135-174)||(11927086-11927125)
chr8 (78-189)||(22595952-22596068)
chr8 (133-204)||(38079017-38079088)
chr8 (135-181)||(4948672-4948718)
chr8 (136-174)||(8847277-8847315)
chr8 (191-233)||(13436911-13436953)
chr8 (135-189)||(20873089-20873143)
chr8 (163-209)||(26915200-26915246)
chr8 (197-234)||(13009422-13009459)
chr8 (137-189)||(9414860-9414912)
chr8 (169-229)||(22197676-22197736)
chr8 (127-179)||(28747430-28747482)
chr8 (154-218)||(44462151-44462215)
chr8 (154-218)||(44469684-44469748)
[»] chr5 (57 HSPs)
chr5 (94-233)||(6401478-6401627)
chr5 (107-230)||(30098982-30099105)
chr5 (106-233)||(21814252-21814390)
chr5 (135-233)||(21576686-21576784)
chr5 (130-233)||(42029767-42029870)
chr5 (133-232)||(30502330-30502429)
chr5 (133-232)||(30542673-30542772)
chr5 (94-232)||(21190998-21191135)
chr5 (78-173)||(32426870-32426965)
chr5 (135-233)||(43564901-43564999)
chr5 (133-233)||(28588615-28588715)
chr5 (115-231)||(19452998-19453125)
chr5 (159-231)||(39268541-39268613)
chr5 (115-170)||(39758272-39758327)
chr5 (163-233)||(21522809-21522879)
chr5 (163-233)||(21533375-21533445)
chr5 (163-233)||(21542089-21542159)
chr5 (133-238)||(17123066-17123170)
chr5 (133-229)||(21194068-21194164)
chr5 (149-221)||(26312803-26312875)
chr5 (105-233)||(42893350-42893478)
chr5 (107-233)||(31084315-31084446)
chr5 (133-232)||(18421779-18421882)
chr5 (163-233)||(39698600-39698670)
chr5 (133-233)||(14873535-14873640)
chr5 (133-232)||(23015926-23016030)
chr5 (169-232)||(43001859-43001922)
chr5 (152-202)||(23012380-23012430)
chr5 (138-230)||(4105282-4105374)
chr5 (163-231)||(18592132-18592200)
chr5 (133-233)||(27932253-27932353)
chr5 (169-233)||(30098391-30098455)
chr5 (163-222)||(15382533-15382592)
chr5 (163-233)||(7677764-7677834)
chr5 (107-233)||(32630676-32630802)
chr5 (133-174)||(3966521-3966562)
chr5 (135-184)||(15884008-15884057)
chr5 (163-232)||(19579760-19579829)
chr5 (94-233)||(6770523-6770654)
chr5 (133-184)||(16203785-16203836)
chr5 (162-233)||(16304367-16304438)
chr5 (105-180)||(34879340-34879415)
chr5 (135-174)||(37328844-37328883)
chr5 (185-232)||(41995534-41995581)
chr5 (163-233)||(3966562-3966632)
chr5 (135-185)||(6247642-6247692)
chr5 (78-112)||(15382423-15382457)
chr5 (183-233)||(23289999-23290049)
chr5 (174-232)||(24238603-24238661)
chr5 (163-233)||(32766873-32766943)
chr5 (168-230)||(36642696-36642757)
chr5 (133-174)||(6471889-6471930)
chr5 (170-233)||(19820329-19820389)
chr5 (133-174)||(41091257-41091298)
chr5 (182-226)||(17088358-17088402)
chr5 (197-233)||(35017125-35017161)
chr5 (169-233)||(40000494-40000558)
[»] chr4 (65 HSPs)
chr4 (94-233)||(5414102-5414251)
chr4 (107-233)||(23292927-23293053)
chr4 (127-233)||(19097836-19097941)
chr4 (107-229)||(49431017-49431140)
chr4 (163-234)||(30982807-30982878)
chr4 (135-233)||(28964189-28964287)
chr4 (133-233)||(8423659-8423759)
chr4 (115-233)||(46083921-46084050)
chr4 (163-233)||(12323968-12324038)
chr4 (151-233)||(12895215-12895297)
chr4 (135-233)||(34306745-34306843)
chr4 (135-233)||(715546-715646)
chr4 (135-233)||(752872-752972)
chr4 (164-233)||(24613631-24613700)
chr4 (133-233)||(35161054-35161154)
chr4 (150-233)||(2361916-2361999)
chr4 (135-230)||(12797282-12797377)
chr4 (110-189)||(54580008-54580087)
chr4 (135-233)||(16073414-16073512)
chr4 (135-233)||(35157926-35158024)
chr4 (133-233)||(36635342-36635448)
chr4 (169-233)||(3947702-3947766)
chr4 (168-234)||(848015-848081)
chr4 (163-233)||(19482727-19482797)
chr4 (163-233)||(19500788-19500858)
chr4 (135-204)||(29205464-29205533)
chr4 (135-192)||(36509074-36509131)
chr4 (135-184)||(40179626-40179675)
chr4 (143-239)||(20950362-20950458)
chr4 (134-233)||(4672026-4672125)
chr4 (115-222)||(21945503-21945610)
chr4 (180-231)||(28084589-28084640)
chr4 (174-233)||(29205527-29205586)
chr4 (163-233)||(53381531-53381602)
chr4 (171-233)||(32273462-32273524)
chr4 (107-169)||(40613442-40613504)
chr4 (135-233)||(42640549-42640642)
chr4 (135-232)||(4157169-4157266)
chr4 (135-232)||(4157456-4157553)
chr4 (169-234)||(14465005-14465070)
chr4 (78-174)||(30298910-30299006)
chr4 (78-174)||(30327778-30327874)
chr4 (94-174)||(13783261-13783340)
chr4 (173-233)||(18966567-18966627)
chr4 (198-237)||(4383449-4383488)
chr4 (133-184)||(10499260-10499311)
chr4 (116-179)||(16189710-16189773)
chr4 (158-233)||(23861370-23861445)
chr4 (163-233)||(24343560-24343631)
chr4 (127-174)||(44132644-44132691)
chr4 (133-195)||(8402721-8402783)
chr4 (133-195)||(9996858-9996920)
chr4 (163-233)||(22234820-22234890)
chr4 (78-112)||(23293065-23293099)
chr4 (163-229)||(30838269-30838335)
chr4 (176-233)||(3064869-3064926)
chr4 (107-180)||(6879459-6879532)
chr4 (78-174)||(12895116-12895210)
chr4 (183-232)||(22440559-22440608)
chr4 (122-178)||(42014965-42015022)
chr4 (197-233)||(5775305-5775341)
chr4 (133-173)||(5775359-5775399)
chr4 (123-195)||(13307885-13307957)
chr4 (91-174)||(22234890-22234973)
chr4 (133-233)||(30103298-30103397)
[»] chr6 (67 HSPs)
chr6 (107-233)||(18367828-18367965)
chr6 (106-233)||(16488520-16488658)
chr6 (94-233)||(13789134-13789272)
chr6 (94-233)||(13797753-13797891)
chr6 (78-233)||(17841530-17841684)
chr6 (135-233)||(34595154-34595252)
chr6 (94-234)||(9658859-9658999)
chr6 (78-233)||(28152063-28152216)
chr6 (110-233)||(17327591-17327719)
chr6 (105-231)||(32978842-32978969)
chr6 (133-231)||(7996325-7996419)
chr6 (133-231)||(8022382-8022476)
chr6 (169-232)||(12696383-12696446)
chr6 (82-234)||(5626640-5626792)
chr6 (115-233)||(7377979-7378097)
chr6 (135-233)||(33001230-33001328)
chr6 (133-232)||(7265535-7265634)
chr6 (163-233)||(8365449-8365519)
chr6 (163-233)||(10339055-10339125)
chr6 (135-233)||(28715315-28715413)
chr6 (94-233)||(8776909-8777052)
chr6 (133-233)||(13360314-13360413)
chr6 (169-233)||(31384984-31385048)
chr6 (133-233)||(32511607-32511707)
chr6 (154-233)||(4877982-4878060)
chr6 (163-233)||(16766756-16766826)
chr6 (107-184)||(19040344-19040421)
chr6 (134-186)||(7740660-7740712)
chr6 (133-233)||(13364646-13364746)
chr6 (152-191)||(30851637-30851676)
chr6 (118-233)||(4388088-4388198)
chr6 (107-233)||(7977771-7977897)
chr6 (105-174)||(26562679-26562748)
chr6 (163-233)||(34446618-34446689)
chr6 (163-233)||(7248417-7248487)
chr6 (163-233)||(9107300-9107370)
chr6 (135-233)||(24645501-24645599)
chr6 (133-174)||(9025494-9025535)
chr6 (133-189)||(31579212-31579266)
chr6 (80-112)||(4118412-4118444)
chr6 (78-233)||(16833267-16833426)
chr6 (135-222)||(853811-853898)
chr6 (133-180)||(5732504-5732551)
chr6 (150-233)||(6898222-6898305)
chr6 (135-174)||(7027262-7027301)
chr6 (198-233)||(10649371-10649406)
chr6 (78-112)||(7938062-7938096)
chr6 (163-233)||(8714039-8714109)
chr6 (108-174)||(8931602-8931668)
chr6 (108-174)||(9107370-9107436)
chr6 (133-175)||(9629401-9629443)
chr6 (149-179)||(21924930-21924960)
chr6 (179-233)||(31959214-31959268)
chr6 (36-77)||(7029850-7029891)
chr6 (133-231)||(8389411-8389513)
chr6 (36-77)||(9159533-9159574)
chr6 (36-77)||(9170854-9170895)
chr6 (133-174)||(9617452-9617493)
chr6 (135-188)||(29020932-29020985)
chr6 (115-195)||(1191679-1191759)
chr6 (135-179)||(1700372-1700416)
chr6 (78-110)||(5970183-5970215)
chr6 (185-233)||(7938170-7938218)
chr6 (94-174)||(9027158-9027237)
chr6 (162-214)||(9522949-9523001)
chr6 (169-233)||(9629448-9629512)
chr6 (169-229)||(24138485-24138545)
[»] chr7 (58 HSPs)
chr7 (127-233)||(18212974-18213080)
chr7 (122-231)||(39138451-39138560)
chr7 (78-233)||(15680773-15680927)
chr7 (133-233)||(32287404-32287504)
chr7 (78-233)||(9778454-9778623)
chr7 (133-233)||(20549809-20549909)
chr7 (133-233)||(21880170-21880270)
chr7 (107-233)||(5409772-5409903)
chr7 (152-233)||(598245-598326)
chr7 (135-233)||(43027405-43027508)
chr7 (163-233)||(24339701-24339771)
chr7 (150-233)||(21864843-21864926)
chr7 (169-233)||(32093955-32094020)
chr7 (133-205)||(5835265-5835337)
chr7 (133-184)||(9482952-9483003)
chr7 (133-223)||(12278853-12278943)
chr7 (166-233)||(25822717-25822784)
chr7 (135-222)||(26733324-26733411)
chr7 (107-233)||(22484017-22484143)
chr7 (139-233)||(33994236-33994330)
chr7 (129-233)||(18035806-18035909)
chr7 (151-233)||(1433490-1433577)
chr7 (135-226)||(41020516-41020607)
chr7 (104-233)||(21568562-21568692)
chr7 (107-233)||(25481894-25482020)
chr7 (133-223)||(27093364-27093454)
chr7 (133-223)||(27184847-27184937)
chr7 (133-233)||(1401043-1401141)
chr7 (164-233)||(7438766-7438835)
chr7 (129-182)||(19213817-19213870)
chr7 (133-174)||(22602710-22602751)
chr7 (176-233)||(29763130-29763187)
chr7 (136-184)||(640134-640182)
chr7 (162-233)||(7133213-7133285)
chr7 (191-231)||(8842282-8842322)
chr7 (169-229)||(13770750-13770810)
chr7 (149-233)||(24105712-24105796)
chr7 (78-174)||(25791617-25791711)
chr7 (133-180)||(3721111-3721158)
chr7 (166-233)||(4794951-4795018)
chr7 (135-214)||(8234166-8234245)
chr7 (129-172)||(17851445-17851488)
chr7 (171-233)||(17852056-17852118)
chr7 (191-233)||(35862027-35862069)
chr7 (115-160)||(1656676-1656721)
chr7 (152-233)||(3554447-3554528)
chr7 (169-234)||(20545184-20545249)
chr7 (129-178)||(24146830-24146879)
chr7 (163-232)||(26033392-26033461)
chr7 (156-225)||(41918906-41918975)
chr7 (169-233)||(2334314-2334378)
chr7 (185-233)||(6490786-6490834)
chr7 (78-234)||(7197237-7197392)
chr7 (163-195)||(9933332-9933364)
chr7 (149-233)||(10359633-10359717)
chr7 (149-233)||(11738152-11738236)
chr7 (185-233)||(28155624-28155672)
chr7 (78-174)||(32308084-32308179)
[»] scaffold0623 (1 HSPs)
scaffold0623 (107-233)||(5926-6063)
[»] scaffold0652 (1 HSPs)
scaffold0652 (135-233)||(403-501)
[»] scaffold0361 (1 HSPs)
scaffold0361 (91-233)||(14506-14645)
[»] scaffold0116 (1 HSPs)
scaffold0116 (94-174)||(9878-9957)
[»] scaffold0306 (1 HSPs)
scaffold0306 (163-232)||(13454-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (163-232)||(21804-21873)
[»] scaffold0083 (1 HSPs)
scaffold0083 (149-233)||(45471-45555)
[»] scaffold0050 (1 HSPs)
scaffold0050 (135-231)||(70298-70394)
[»] scaffold0053 (1 HSPs)
scaffold0053 (150-233)||(8833-8916)
[»] scaffold0003 (1 HSPs)
scaffold0003 (163-233)||(241653-241723)
[»] scaffold0793 (1 HSPs)
scaffold0793 (135-233)||(4822-4922)
[»] scaffold0475 (1 HSPs)
scaffold0475 (150-233)||(3343-3426)
[»] scaffold0380 (1 HSPs)
scaffold0380 (163-233)||(8649-8719)
[»] scaffold0019 (1 HSPs)
scaffold0019 (163-233)||(71784-71854)
[»] scaffold0004 (1 HSPs)
scaffold0004 (168-234)||(92875-92941)
[»] scaffold0512 (1 HSPs)
scaffold0512 (152-233)||(4977-5058)
[»] scaffold0450 (1 HSPs)
scaffold0450 (163-233)||(8565-8635)
[»] scaffold0123 (1 HSPs)
scaffold0123 (106-170)||(44529-44593)
[»] scaffold0044 (1 HSPs)
scaffold0044 (163-227)||(53239-53303)
[»] scaffold0022 (1 HSPs)
scaffold0022 (133-233)||(90861-90961)
[»] scaffold0136 (1 HSPs)
scaffold0136 (163-233)||(3779-3849)
[»] scaffold0086 (1 HSPs)
scaffold0086 (163-233)||(2987-3057)
[»] scaffold0036 (2 HSPs)
scaffold0036 (163-232)||(9678-9747)
scaffold0036 (133-174)||(9747-9788)
[»] scaffold0279 (1 HSPs)
scaffold0279 (78-189)||(17737-17844)
[»] scaffold0227 (1 HSPs)
scaffold0227 (189-233)||(15045-15089)
[»] scaffold0697 (1 HSPs)
scaffold0697 (154-204)||(1683-1733)
[»] scaffold0154 (1 HSPs)
scaffold0154 (163-233)||(13472-13542)
[»] scaffold0103 (1 HSPs)
scaffold0103 (88-189)||(51785-51888)
[»] scaffold0057 (1 HSPs)
scaffold0057 (163-233)||(24083-24154)
[»] scaffold0020 (1 HSPs)
scaffold0020 (133-174)||(135312-135353)
[»] scaffold0008 (1 HSPs)
scaffold0008 (163-232)||(263303-263372)


Alignment Details
Target: chr1 (Bit Score: 112; Significance: 1e-56; HSPs: 79)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 94 - 233
Target Start/End: Complemental strand, 10577814 - 10577676
Alignment:
Q  94 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgac 193  Q
    ||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||    
T  10577814 gacacggacaccg-acacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcgggggcggacacgacgcgtgtctgac 10577716  T
Q  194 acggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10577715 acggggacacgccttatccaaggagtgtccgtgcttcata 10577676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 235 - 341
Target Start/End: Original strand, 4428704 - 4428810
Alignment:
Q  235 tttcacccatttatgcgccttctcatcaagcctaaacaccttaatccaaaaaacactgtcaccactagcaaaacctaaaaactcataaatgaccactagc 334  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4428704 tttcacccatttacgcgccttctcatcaagcctaaacaccttaatccaaaaaacactgtcaccactagcaaaacctaaaaactcataaatgaccactagc 4428803  T
Q  335 aacaact 341  Q
    |||||||    
T  4428804 aacaact 4428810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 78 - 233
Target Start/End: Original strand, 25934574 - 25934745
Alignment:
Q  78 atgaagcactgatacggacacggacaccggaca-----cgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgt------ 166  Q
    ||||||||| |||||||||||||||||||||||     ||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||          
T  25934574 atgaagcacggatacggacacggacaccggacatgacacgccgacacagctaaattttctagaaaatcacaaaatacagtgtaattatatgtgtcggtat 25934673  T
Q  167 -----cggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
         |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25934674 cgtgtcggtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcata 25934745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 78 - 238
Target Start/End: Complemental strand, 46348478 - 46348319
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 177  Q
    ||||||||| ||||||||||||||||| | |||||| |||||||||||   ||| | ||||||| | |||  |||||||||| | |||||||||||||||    
T  46348478 atgaagcacggatacggacacggacactg-acacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcggac 46348380  T
Q  178 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatattttc 238  Q
    |||||||||||| ||||| | ||||||||| |||| ||| |||||||||||||||| ||||    
T  46348379 acgacacgtgtccgacaccgagacacgcctgatccgaggtgtgtccgtgcttcatagtttc 46348319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 94 - 233
Target Start/End: Complemental strand, 41597549 - 41597411
Alignment:
Q  94 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgca-gtgtaattatatgtgtcggtgtcggacacgacacgtgtctga 192  Q
    ||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||  | ||||   | | |||||| ||||||||||||||||||||||||    
T  41597549 gacacggacaccg-acacgccaacacagctaaattttctagaaaatcacaaaatatatgtgttggtgt-tgtgtccgtgtcggacacgacacgtgtctga 41597452  T
Q  193 cacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||| |||| |||||||||||||||| ||||||||||    
T  41597451 cacggggatacgctttatccaaggagtgtctgtgcttcata 41597411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 4428638 - 4428709
Alignment:
Q  6 agaagcataggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactcgtcaatttcac 77  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4428638 agaagcagaggcagaaaacaaacatccattccccaaaaacaaaaccctatcccccaaactcgtcaatttcac 4428709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 127 - 234
Target Start/End: Original strand, 12918957 - 12919064
Alignment:
Q  127 ttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 226  Q
    ||||||||| ||||||| ||| || ||| ||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||| || ||||| ||||    
T  12918957 ttttttagacaatcacataattcaatgtgattatatgtgttggtatcggacacgacacgtgtctgacacggggacacggcttatccgagaagtgttcgtg 12919056  T
Q  227 cttcatat 234  Q
    ||||||||    
T  12919057 cttcatat 12919064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 127 - 233
Target Start/End: Original strand, 30749852 - 30749958
Alignment:
Q  127 ttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 226  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||| |||| ||||||| ||| |||| |||| | |||||||||| ||    
T  30749852 ttttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacaccacatgtgtttgacacgaggatacgcattattcgaggagtgtccatg 30749951  T
Q  227 cttcata 233  Q
    |||||||    
T  30749952 cttcata 30749958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 127 - 233
Target Start/End: Original strand, 30771303 - 30771409
Alignment:
Q  127 ttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 226  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||| |||| ||||||| ||| |||| |||| | |||||||||| ||    
T  30771303 ttttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacaccacatgtgtttgacacgaggatacgcattattcgaggagtgtccatg 30771402  T
Q  227 cttcata 233  Q
    |||||||    
T  30771403 cttcata 30771409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 37598852 - 37598949
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||| | ||||||||||||| ||||||||||||||||||||||||||| ||||  ||||||||||| |||| ||||||||||||||||||||    
T  37598852 aaaatcacaaatt-cagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaatgggacacgcctaatccgaggagtgtccgtgcttcata 37598949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 107 - 232
Target Start/End: Complemental strand, 42359516 - 42359391
Alignment:
Q  107 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 206  Q
    |||||||||||||| ||||   ||| | ||||||||||||| ||||||||||| | |||||||||||||||| |||  ||||| ||||| ||||||||||    
T  42359516 gacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcggacaagacgtgtgtccgacaccgggacacgcc 42359417  T
Q  207 ttatccaaggagtgtccgtgcttcat 232  Q
    | |||| |||||||||||||||||||    
T  42359416 taatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 162 - 233
Target Start/End: Complemental strand, 32461465 - 32461394
Alignment:
Q  162 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||    
T  32461465 tgtgtcggtgtcggacacgacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgcttcata 32461394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 78 - 233
Target Start/End: Original strand, 51409983 - 51410143
Alignment:
Q  78 atgaagcactgatacggacacggacac----cggacacgctgacacagctaa-attttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt 172  Q
    ||||||||| |||||||||||||||||    |||||| || |||||| |||| | |||  | ||||||||| ||| ||||||||||| | ||||||||||    
T  51409983 atgaagcacggatacggacacggacacaaaacggacatgccgacacatctaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgt 51410082  T
Q  173 cggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||||| || ||||| | ||||||||| ||||||||||| | |||||||||||    
T  51410083 cggacacgacacgtatccgacaccgagacacgcctaatccaaggagtattcgtgcttcata 51410143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 107 - 232
Target Start/End: Complemental strand, 1486776 - 1486646
Alignment:
Q  107 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-----gacacgacacgtgtctgacacggggac 201  Q
    |||||||||||||||||||   ||| | ||||||||| ||| ||||||||||||| ||||||||||||     ||||||||||||||| ||||| |||||    
T  1486776 gacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccgggac 1486677  T
Q  202 acgccttatccaaggagtgtccgtgcttcat 232  Q
    |||||| |||| ||||||||| |||||||||    
T  1486676 acgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 18337349 - 18337447
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||| ||| ||||||||||| | ||||||||||||||||| ||||||||| ||||| |||||| |||| |||| ||||||||||||||||||||    
T  18337349 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccgacactgggacatgcctgatccgaggagtgtccgtgcttcata 18337447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 96 - 233
Target Start/End: Complemental strand, 22515964 - 22515828
Alignment:
Q  96 cacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacac 195  Q
    ||||||||| |||||||| |||||||||||   ||| | ||||||||| |||  |||||||||| | |||||||||||||||||||||| | || |||||    
T  22515964 cacggacac-ggacacgcagacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacacatatccgacac 22515866  T
Q  196 ggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
     | ||||||||| |||| ||||||||||||||||||||    
T  22515865 cgagacacgcctaatccgaggagtgtccgtgcttcata 22515828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 229
Target Start/End: Complemental strand, 5898305 - 5898211
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 229  Q
    ||||||||| ||| ||||||||||||||| ||||||||| |||||||||||||||  |||| |||||||| || |||| ||||||||||||||||    
T  5898305 aaaatcacataattcagtgtaattatatgcgtcggtgtcagacacgacacgtgtccaacaccgggacacgtctaatccgaggagtgtccgtgctt 5898211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 107 - 232
Target Start/End: Complemental strand, 29163448 - 29163323
Alignment:
Q  107 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 206  Q
    ||||||| ||||| ||||||  |||  |||||||||| ||| || | |||||||||||||||||||||||||||||||||| ||||||| |||||||| |    
T  29163448 gacacgccgacaccgctaaaaatttaggaaaatcacataattcaatttaattatatgtgtcggtgtcggacacgacacgtgcctgacaccgggacacggc 29163349  T
Q  207 ttatccaaggagtgtccgtgcttcat 232  Q
    | |||  || ||||| ||||||||||    
T  29163348 taatcagagaagtgttcgtgcttcat 29163323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 78 - 233
Target Start/End: Original strand, 36878419 - 36878584
Alignment:
Q  78 atgaagcactgatacggacacggacaccg-----gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt 172  Q
    ||||||||| ||||||||||||||||  |     ||||||| ||||| |||||   ||| ||||||||||| ||| ||||||||||||| ||||||||||    
T  36878419 atgaagcacggatacggacacggacatagacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgt 36878518  T
Q  173 cggacacgacacgtgtc-----tgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    | ||||||| || ||||      ||||||||||||||||| |||| ||||||||||||||||||||    
T  36878519 ctgacacgaaacatgtccgacacgacacggggacacgcctaatcccaggagtgtccgtgcttcata 36878584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 239
Target Start/End: Original strand, 47989556 - 47989632
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatattttca 239  Q
    |||||||||||||||||||||| |||||||||  ||||||||||| |||| |||||||||||||||||||| |||||    
T  47989556 gtgtcggtgtcggacacgacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttcatagtttca 47989632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 40181889 - 40181976
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtg 220  Q
    ||||||||||| ||| |||||||||||||||| |||||||||||||| |||||||||  |||| ||||||||||| |||| |||||||    
T  40181889 agaaaatcacataattcagtgtaattatatgtatcggtgtcggacacaacacgtgtcctacaccgggacacgcctaatccgaggagtg 40181976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 107 - 233
Target Start/End: Original strand, 1815249 - 1815375
Alignment:
Q  107 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 206  Q
    ||||||| ||||||  ||| | ||||| ||||||||| ||| ||||||||||| | ||||||||||| |||||||||| |||| ||||| ||||||||||    
T  1815249 gacacgccgacacaaataattattttaaaaaatcacataattcagtgtaattacaagtgtcggtgtccgacacgacacatgtccgacaccgggacacgcc 1815348  T
Q  207 ttatccaaggagtgtccgtgcttcata 233  Q
    | |||  ||||||| ||||| ||||||    
T  1815349 taatctgaggagtgaccgtgattcata 1815375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 135 - 233
Target Start/End: Complemental strand, 40258972 - 40258874
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||| ||| ||||||||||| | ||||||||||| |||||||||| |||| |||||  |||||||||| |||| |||||||||| |||||||||    
T  40258972 aaaatcacataattcagtgtaattacaagtgtcggtgtcagacacgacacctgtccgacaccaggacacgcctaatccgaggagtgtccatgcttcata 40258874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 4439868 - 4439932
Alignment:
Q  7 gaagcataggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactcgtcaa 71  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  4439868 gaagcagaagcagaaaacgaacatccattccccaaaaacaaaaccctatctcccaaactcatcaa 4439932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 40917808 - 40917878
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||| |||| |||| |||||||||||||||    
T  40917808 gtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcata 40917878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 52903269 - 52903364
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||| | ||| ||||||||||||||||||||||||||||||||    ||||| ||||| |||||||| ||||| | | ||||||||||||||||||    
T  52903269 aaaatcatataattcagtgtaattatatgtgtcggtgtcggacacg---tgtgtccgacaccgggacacggcttattcgaagagtgtccgtgcttcata 52903364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 2896188 - 2896062
Alignment:
Q  107 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 206  Q
    ||||||| ||||| |||||   ||| ||||||||||| ||| |||||||  ||||| |||||||||| ||||||||| ||||| || || ||||||| ||    
T  2896188 gacacgccgacaccgctaataatttgagaaaatcacataattcagtgtagctatatatgtcggtgtcagacacgacatgtgtccgagaccgggacacacc 2896089  T
Q  207 ttatccaaggagtgtccgtgcttcata 233  Q
    | ||||||| ||||||| || ||||||    
T  2896088 taatccaagaagtgtccatgtttcata 2896062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 9828103 - 9828173
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||| ||||| ||||||||||||||| ||||| |||||||| || |||| ||||||||||||||||||||    
T  9828103 gtgtccgtgtcagacacgacacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcata 9828173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 133 - 233
Target Start/End: Complemental strand, 27966039 - 27965941
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    |||||||||  |||| ||||||||||||||||  | ||||| |||||| | |||| ||||||| ||||||||||| |||| |||||||||| ||||||||    
T  27966039 agaaaatcattaaattcagtgtaattatatgt--ccgtgtcagacacgcctcgtgcctgacaccgggacacgcctaatccgaggagtgtccatgcttcat 27965942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 39130812 - 39130711
Alignment:
Q  129 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgct 228  Q
    ||||||||||| | | |||  |||||||||||||||||||||||||||||| |||||||   ||||  ||||||||| | |||||| |||||||| ||||    
T  39130812 ttttagaaaattatataatttagtgtaattatatgtgtcggtgtcggacacaacacgtgctcgacattgggacacgcttaatccaaagagtgtccatgct 39130713  T
Q  229 tc 230  Q
    ||    
T  39130712 tc 39130711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 31015091 - 31015155
Alignment:
Q  169 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||||||||  || ||||||||||    
T  31015091 gtgtcggacacgacacgtgtctgacatcgggacacgcctaatccaaggaggatcagtgcttcata 31015155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 171 - 233
Target Start/End: Original strand, 6427531 - 6427593
Alignment:
Q  171 gtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||||| ||||| ||||||||||| |||  | ||||||||||||||||||    
T  6427531 gtcggacacgacacgtgtccgacaccgggacacgcctaatctgatgagtgtccgtgcttcata 6427593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 232
Target Start/End: Complemental strand, 16297322 - 16297223
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtc---ggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 231  Q
    ||||||||||||| ||||||||||| |  ||||   |||||||||||||||  ||||| |||||  |||||||||| |||| ||||||||||||||||||    
T  16297322 aaaatcacaaaattcagtgtaattacaa-tgtccggggtgtcggacacgacgtgtgtccgacaccaggacacgcctaatccgaggagtgtccgtgcttca 16297224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 115 - 233
Target Start/End: Complemental strand, 38078720 - 38078602
Alignment:
Q  115 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaa 214  Q
    |||||||||||   ||| | ||||||||| ||| || |||||||| | |||||||||||||||||||||| |||   ||||  |||||||||| |||| |    
T  38078720 gacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcggacacgacacatgttcaacaccaggacacgcctaatccga 38078621  T
Q  215 ggagtgtccgtgcttcata 233  Q
    ||||| | |||||||||||    
T  38078620 ggagtattcgtgcttcata 38078602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 115 - 233
Target Start/End: Complemental strand, 45534248 - 45534131
Alignment:
Q  115 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaa 214  Q
    ||||||||||||||||| ||||||||||| |||  ||||||| ||||| ||||||||| |      ||| ||||||||||  |||||||||||||||| |    
T  45534248 gacacagctaaattttt-agaaaatcacataatttagtgtaagtatatatgtcggtgtggtgtggtacatgtgtctgacatagggacacgccttatccga 45534150  T
Q  215 ggagtgtccgtgcttcata 233  Q
    |||||||  ||||||||||    
T  45534149 ggagtgtttgtgcttcata 45534131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 18991211 - 18991260
Alignment:
Q  6 agaagcataggcagaaaacgaacatccattccccaaaaacaaaaccctat 55  Q
    ||||||| | |||||||||||||||||||||||||| |||||||||||||    
T  18991211 agaagcagaagcagaaaacgaacatccattccccaagaacaaaaccctat 18991260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 92 - 233
Target Start/End: Complemental strand, 6415082 - 6414932
Alignment:
Q  92 cggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtc----------ggacacga 181  Q
    ||||||||||||| | |||||| ||||  ||||| | ||| ||||||||||| ||| |||| |||||| |||||||||||||          ||||||||    
T  6415082 cggacacggacactg-acacgccgacatcgctaattatttgagaaaatcacataatacagtttaattagatgtgtcggtgtcattcgatgtcggacacga 6414984  T
Q  182 cacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||||| | |||||   | |||| ||||||||||||||||||||    
T  6414983 cacgtgtctgacaccgcgacacatttcatccgaggagtgtccgtgcttcata 6414932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 233
Target Start/End: Complemental strand, 7918252 - 7918155
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-gacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 231  Q
    ||||||||||| ||| ||||||||||||||||||| |||||| | ||    |||| ||||||||  |||||| ||| |||| ||||||||||||||||||    
T  7918252 agaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtca----acgtttctgacaccaggacacacctaatccgaggagtgtccgtgcttca 7918157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 233
Target Start/End: Complemental strand, 34712424 - 34712324
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||| ||| |||  |||||||||||||||||| ||||||     ||||||||||  |||| |||||||| || || |||||||||||||||||||||    
T  34712424 agaaaataacataatttagtgtaattatatgtgtcagtgtcgtgtcggacacgtgtcctacactgggacacgtctaattcaaggagtgtccgtgcttcat 34712325  T
Q  233 a 233  Q
    |    
T  34712324 a 34712324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 1864921 - 1864874
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 180  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  1864921 agaaaatcacataattcagtgtaattatatgtgtcggtgttggacacg 1864874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 36906055 - 36906125
Alignment:
Q  162 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||| |||||||||||||| || ||||||||| ||||||| ||| || ||| ||||||||||||||||||    
T  36906055 tgtgtcagtgtcggacacgacccgcgtctgacactgggacacacctaatgcaa-gagtgtccgtgcttcata 36906125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 9629900 - 9629834
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 229  Q
    |||||| ||||||||||||||| |||| ||||| |||||||| ||  |||||| |||||||||||||    
T  9629900 gtgtcgatgtcggacacgacacatgtccgacaccgggacacgtctcgtccaagaagtgtccgtgctt 9629834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 233
Target Start/End: Complemental strand, 9690313 - 9690214
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 231  Q
    ||||||||||||  | ||||||||| ||||||||||| ||||| ||| |||||||||| ||||| ||||||||||| ||||   ||||||  ||||||||    
T  9690313 agaaaatcacaa--ttcagtgtaatcatatgtgtcggcgtcggccactgacacgtgtccgacaccgggacacgcctaatccggagagtgtttgtgcttca 9690216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 13997903 - 13997957
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtc 189  Q
    ||||||||| ||| |||||||||||||||||||||||| ||| ||||||| ||||    
T  13997903 aaaatcacataattcagtgtaattatatgtgtcggtgttggagacgacacatgtc 13997957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 221
Target Start/End: Complemental strand, 18190147 - 18190061
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgt 221  Q
    ||||| ||| ||| ||||||||||| | |||||| |||| ||||| ||||||||| ||||| ||||||| ||| |||| ||||||||    
T  18190147 aaaattacataattcagtgtaattacaagtgtcgatgtcagacacaacacgtgtccgacaccgggacacacctaatccgaggagtgt 18190061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 18556452 - 18556386
Alignment:
Q  167 cggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||| ||| |||||||| || ||||| ||||||||||| |||| || |||||||||||||||||    
T  18556452 cggtgtcagacccgacacgtatccgacactgggacacgcctaatccgagaagtgtccgtgcttcata 18556386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 21032265 - 21032335
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||| |||||||||||||||| ||||| ||||  | || |||||| |||||||||||||| ||||||||||    
T  21032265 gtgtgggtgtcggacacgacatgtgtccgacatcgagagacgcctaatccaaggagtgtctgtgcttcata 21032335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 179
Target Start/End: Complemental strand, 39953191 - 39953141
Alignment:
Q  129 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac 179  Q
    ||||||||||||||| |||  ||||||||| ||||||||||||||||||||    
T  39953191 ttttagaaaatcacataatttagtgtaattgtatgtgtcggtgtcggacac 39953141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 48415702 - 48415664
Alignment:
Q  198 ggacacgccttatccaaggagtgtccgtgcttcatattt 236  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  48415702 ggacacgcctaatccaaggagtgtccgtgcttcatattt 48415664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 14332683 - 14332634
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgac 182  Q
    ||||||||||| |||  ||||||||||||||| |||||||||||||||||    
T  14332683 agaaaatcacataatttagtgtaattatatgtctcggtgtcggacacgac 14332634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 34371731 - 34371772
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  34371731 agaaaatcacataattcagtgtaattatatgtgtcggtgtcg 34371772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 44482248 - 44482289
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  44482248 agaaaatcacataattcagtgtaattatatgtgtcggtgtcg 44482289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 232
Target Start/End: Complemental strand, 11412809 - 11412709
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacga-cacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 231  Q
    ||||||| ||| ||| || ||| || ||| |||||||||| |||||| | || ||||| |||||  ||||| ||||||||| ||||||||||||||||||    
T  11412809 agaaaatgacataattcaatgtgatcataggtgtcggtgttggacaccaacatgtgtccgacactaggacatgccttatcctaggagtgtccgtgcttca 11412710  T
Q  232 t 232  Q
    |    
T  11412709 t 11412709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 13436479 - 13436523
Alignment:
Q  136 aaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 180  Q
    |||||||| ||| |||||||||||||||||| |||||||||||||    
T  13436479 aaatcacataattcagtgtaattatatgtgttggtgtcggacacg 13436523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 15765828 - 15765876
Alignment:
Q  185 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||| ||||||||||| |||| | ||||||||||||||||||    
T  15765828 gtgtctgacactgggacacgcctaatccgaagagtgtccgtgcttcata 15765876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 6612171 - 6612112
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtc 222  Q
    |||||| |||||||||||| | ||||| |||||  |||||||||| ||||||||||||||    
T  6612171 gtgtcgatgtcggacacgatatgtgtccgacaccaggacacgcctaatccaaggagtgtc 6612112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 9709838 - 9709885
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 180  Q
    ||||||||||| ||| |  |||||||||||||||||||||||||||||    
T  9709838 agaaaatcacataattcgttgtaattatatgtgtcggtgtcggacacg 9709885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 17705626 - 17705576
Alignment:
Q  134 gaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacg 185  Q
    |||||||||| ||| ||||||||||||||||||| ||||||||| |||||||    
T  17705626 gaaaatcacataattcagtgtaattatatgtgtc-gtgtcggacgcgacacg 17705576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 115 - 170
Target Start/End: Original strand, 34315712 - 34315767
Alignment:
Q  115 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggt 170  Q
    ||||||||||||||||||| ||||  ||| ||| | ||||||||||||||||||||    
T  34315712 gacacagctaaattttttaaaaaactacataattcggtgtaattatatgtgtcggt 34315767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 34741894 - 34741964
Alignment:
Q  163 gtgtcggtgtcggacacgaca-cgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||| |||||| ||||||||| |||||| |||||||| |||||||| |||| | ||||||||||||||||||    
T  34741894 gtgttggtgtctgacacgacaacgtgtccgacacggg-acacgcctaatccgaagagtgtccgtgcttcata 34741964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 212
Target Start/End: Complemental strand, 43492535 - 43492456
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatcc 212  Q
    ||||||||||  ||| | |||||||||| |||||||||||| ||||| |||| |||| ||||| || |||||||| ||||    
T  43492535 agaaaatcacgtaattcggtgtaattatgtgtgtcggtgtcagacacaacacatgtccgacaccggcacacgcctaatcc 43492456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 1704986 - 1704936
Alignment:
Q  183 acgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||| ||||| | ||||||||| ||||||||||||||| |||||||||    
T  1704986 acgtgtccgacaccgagacacgcctaatccaaggagtgtccatgcttcata 1704936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 5944342 - 5944412
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||| || ||||||| |||| |||| ||||| |||| |||||| |||| |||||||| |||||||||||    
T  5944342 gtgtcgatgacggacacaacacatgtccgacaccgggatacgcctaatccgaggagtgttcgtgcttcata 5944412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 6574053 - 6574095
Alignment:
Q  191 gacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||| ||||||||||| |||||||||||| ||||||||||||    
T  6574053 gacactgggacacgcctaatccaaggagtgaccgtgcttcata 6574095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 222
Target Start/End: Complemental strand, 8842736 - 8842666
Alignment:
Q  152 tgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtc 222  Q
    ||||||||||||| | ||||||||||||||||||| || ||||   |||||||||| || ||| |||||||    
T  8842736 tgtaattatatgtattggtgtcggacacgacacgtatccgacatcaggacacgcctaattcaaagagtgtc 8842666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 112
Target Start/End: Complemental strand, 10577848 - 10577814
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacacg 112  Q
    ||||||||| |||||||||||||||||||||||||    
T  10577848 atgaagcacggatacggacacggacaccggacacg 10577814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 12443529 - 12443456
Alignment:
Q  105 cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac 179  Q
    ||||||||| |||||||||||   ||| ||||||||||| ||| |||||||||| |||||| | |||||||||||    
T  12443529 cggacacgccgacacagctaataatttgagaaaatcacataattcagtgtaattgtatgtgac-gtgtcggacac 12443456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 21530728 - 21530778
Alignment:
Q  154 taattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacg 204  Q
    |||||||| |||||||||||||||||||||| |||| |||||  |||||||    
T  21530728 taattataagtgtcggtgtcggacacgacacatgtccgacactaggacacg 21530778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 229
Target Start/End: Original strand, 26830608 - 26830701
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 229  Q
    ||||||||| |||  | |||||||||| |||||| |||| ||||| ||||||||  || || ||||||||||| |||  ||||||||||||||||    
T  26830608 aaaatcacataattaaatgtaattataagtgtcg-tgtcagacactacacgtgttcgataccgggacacgcctaatcagaggagtgtccgtgctt 26830701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 31694710 - 31694640
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||| |||| | |  ||||| || |||||||| |||  ||||||||||||||||||||    
T  31694710 gtgtcggtgtcggacacaacacatattcgacaccggaacacgcctaatctgaggagtgtccgtgcttcata 31694640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 112
Target Start/End: Complemental strand, 38078769 - 38078735
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacacg 112  Q
    ||||||||| |||||||||||||||||||||||||    
T  38078769 atgaagcacggatacggacacggacaccggacacg 38078735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 20157391 - 20157350
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    ||||||||||| ||| ||||||||| ||||||||||||||||    
T  20157391 agaaaatcacataattcagtgtaatcatatgtgtcggtgtcg 20157350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 22881655 - 22881606
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacac 184  Q
    ||||||||| |||  |||||||||| | ||||||||||||||||||||||    
T  22881655 aaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacac 22881606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 174
Target Start/End: Complemental strand, 24577255 - 24577186
Alignment:
Q  105 cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    |||||||||||||||| ||||   ||| | ||||||||| ||| ||||||||||| | ||||||||||||    
T  24577255 cggacacgctgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 24577186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 25361904 - 25361945
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    ||||||||||| ||| ||||||||||||||||||| ||||||    
T  25361904 agaaaatcacataattcagtgtaattatatgtgtcagtgtcg 25361945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 111
Target Start/End: Complemental strand, 48548075 - 48548042
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacac 111  Q
    ||||||||| ||||||||||||||||||||||||    
T  48548075 atgaagcacggatacggacacggacaccggacac 48548042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 10572575 - 10572535
Alignment:
Q  193 cacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||| |||||||||| || ||||||||||||||||||||||    
T  10572575 cacgtggacacgcctaattcaaggagtgtccgtgcttcata 10572535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 32899937 - 32900009
Alignment:
Q  162 tgtgtcggtgtcggaca-cgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||| |||| | |||| ||||| ||||||| ||| |||| |||| ||||| |||||||||    
T  32899937 tgtgtcggtgtcggacaccgacgcatgtcggacaccgggacacccctaatccgaggattgtccttgcttcata 32900009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 35702579 - 35702543
Alignment:
Q  197 gggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  35702579 gggacacgcctaatccgaggagtgtccgtgcttcata 35702543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 108; Significance: 4e-54; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 78 - 233
Target Start/End: Complemental strand, 13845612 - 13845466
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 177  Q
    ||||||||| |||||||||||||||||||         |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13845612 atgaagcacggatacggacacggacaccg---------acacagttaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 13845522  T
Q  178 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13845521 acgagacgtgtctgacacggagacacgccttatccaaggagtgtccgtgcttcata 13845466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 107 - 233
Target Start/End: Original strand, 35222930 - 35223056
Alignment:
Q  107 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 206  Q
    ||||||| |||||| ||||  |||||||||||||||| ||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  35222930 gacacgccgacacaactaacatttttagaaaatcacataattcaatgtaattatatgtgtcggtgtcggacatgacacgtgtctgacacggggacacgct 35223029  T
Q  207 ttatccaaggagtgtccgtgcttcata 233  Q
    |||||| ||||||||||||||||||||    
T  35223030 ttatccgaggagtgtccgtgcttcata 35223056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 132 - 215
Target Start/End: Original strand, 2941575 - 2941658
Alignment:
Q  132 tagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaag 215  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||    
T  2941575 tagaaaatcacaaaatacagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacatggggatatgccttatccaag 2941658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 135 - 233
Target Start/End: Complemental strand, 40993374 - 40993276
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||| |||| |||||||||| |||||||||    
T  40993374 aaaatcacataattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcata 40993276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 78 - 174
Target Start/End: Original strand, 14027961 - 14028066
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacacg---------ctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcg 168  Q
    ||||||||| |||||||||||||||||||||||||         | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14027961 atgaagcacggatacggacacggacaccggacacgacacggacaccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcg 14028060  T
Q  169 gtgtcg 174  Q
    ||||||    
T  14028061 gtgtcg 14028066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 78 - 233
Target Start/End: Original strand, 20503430 - 20503583
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 177  Q
    ||||||||| |||||||||||| |||| | |||||| |||||| | ||   ||| | ||||| ||| ||| ||||||||||| | |||||||||| ||||    
T  20503430 atgaagcacggatacggacacg-acactg-acacgccgacacaacaaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgttggac 20503527  T
Q  178 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||| |||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  20503528 acgacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 20503583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 55401095 - 55401193
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||| |||  |||||||||| | ||||||||||||||||||||||||||| ||||| | ||||||||| |||| ||||||||||||||||||||    
T  55401095 aaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcata 55401193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 28918021 - 28918120
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg--gacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||| ||| ||||||||||| | ||||||||||||  ||||||||||||||| ||||| ||||||||||| ||||||||||||||| ||||||||    
T  28918021 aaaatcacataattcagtgtaattacaagtgtcggtgtcgtggacacgacacgtgtccgacactgggacacgcctaatccaaggagtgtccctgcttcat 28918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 133 - 233
Target Start/End: Complemental strand, 8789591 - 8789489
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg--acacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttc 230  Q
    ||||||||||| ||| | ||||||||||||||||||||||||||||||  |||| |||| ||||| | ||||||||| |||| |||||||||||||||||    
T  8789591 agaaaatcacataattccgtgtaattatatgtgtcggtgtcggacacgacacacatgtcggacaccgagacacgcctaatccgaggagtgtccgtgcttc 8789492  T
Q  231 ata 233  Q
    |||    
T  8789491 ata 8789489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 10954972 - 10955073
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaagg---agtgtccgtgcttca 231  Q
    ||||||||| ||| ||||||||| | | ||||||||||||||||||||||||||| ||||| ||||||||||| |||| |||   |||||||||||||||    
T  10954972 aaaatcacataattcagtgtaatcacaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttca 10955071  T
Q  232 ta 233  Q
    ||    
T  10955072 ta 10955073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 9494917 - 9494846
Alignment:
Q  6 agaagcataggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactcgtcaatttcac 77  Q
    ||||||| | |||||||||||||||||||||||||| ||||||||||||||||| |||||| |||| |||||    
T  9494917 agaagcagaagcagaaaacgaacatccattccccaagaacaaaaccctatcccctaaactcatcaaattcac 9494846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 15864868 - 15864952
Alignment:
Q  150 agtgtaattatatgtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatatt 235  Q
    |||||||| ||| |||||| |||||||||| ||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||    
T  15864868 agtgtaatcataggtgtcg-tgtcggacaccgacacgtgtctgacacggg-acacgcctaatccaaagagtgtccgtgcttcatatt 15864952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 18426969 - 18427067
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||| ||| | |||||||||||| ||||||||||||| |||||||||||| | ||| ||||||| ||| |||  ||||||||||||| ||||||    
T  18426969 aaaatcacataattcggtgtaattatatatgtcggtgtcggatacgacacgtgtccggcaccgggacacacctaatctgaggagtgtccgtgtttcata 18427067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 105 - 233
Target Start/End: Original strand, 27505236 - 27505369
Alignment:
Q  105 cggacacgctgacacagctaa-attttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-----gacacgacacgtgtctgacacggg 198  Q
    |||||| || ||||||||||| | |||||| ||||||||| |||  |||||||||| | ||||||||||||     ||||||||||||||| ||||| ||    
T  27505236 cggacaagccgacacagctaataattttta-aaaatcacataattaagtgtaattacaagtgtcggtgtcgtgtctgacacgacacgtgtccgacaccgg 27505334  T
Q  199 gacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||| |||| |||| ||||||||||||||||||||    
T  27505335 gacatgcctaatccgaggagtgtccgtgcttcata 27505369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 41961650 - 41961580
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||| |||||||||||||||||| ||||| ||||||||||| |||| || |||||||||||||||||    
T  41961650 gtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcata 41961580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 4987291 - 4987222
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||| |||| |||||||||||| ||||||    
T  4987291 gtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 227
Target Start/End: Original strand, 3631708 - 3631796
Alignment:
Q  139 tcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgc 227  Q
    ||||| ||| ||||||||||||||||| | |||||||||||||||| |||| |||||  ||||||||||  ||| ||||||||||||||    
T  3631708 tcacataattcagtgtaattatatgtgccagtgtcggacacgacacatgtccgacaccaggacacgcctagtccgaggagtgtccgtgc 3631796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 7171537 - 7171607
Alignment:
Q  151 gtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgt 221  Q
    ||||||||| | |||| |||||||||||||||||||||| ||||| | ||||||||| |||||||||||||    
T  7171537 gtgtaattacaagtgttggtgtcggacacgacacgtgtccgacaccgcgacacgcctaatccaaggagtgt 7171607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 16000008 - 15999950
Alignment:
Q  176 acacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatat 234  Q
    |||||||||||||| ||||| ||||||||||| ||||||||||||||||||| ||||||    
T  16000008 acacgacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcatcatat 15999950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 25064966 - 25065036
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||| |||||||||||||||||||||||||||| ||||||||  |||||| |||||||| |||||| ||||    
T  25064966 gtgttggtgtcggacacgacacgtgtctgacaccgggacacggtttatccgaggagtgttcgtgctccata 25065036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 25093520 - 25093582
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacac 195  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| |||| |||| |||||    
T  25093520 agaaaatcacacaattcagtgtaattatatgtgtcggtgtcggacacaacacatgtccgacac 25093582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 133 - 233
Target Start/End: Original strand, 11251996 - 11252094
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||||| ||| ||||||||||||  ||||||||||| ||||| ||||||||| | ||  || |||||||| |||| ||||||||| |||||||||    
T  11251996 agaaaatcacataattcagtgtaattat--gtgtcggtgtcagacacaacacgtgtccggcatcggaacacgcctaatccgaggagtgtctgtgcttcat 11252093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 81 - 235
Target Start/End: Complemental strand, 24633498 - 24633341
Alignment:
Q  81 aagcactgatacggacacggacacc----ggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgga 176  Q
    |||||| |||||||||||||||||     |||||| ||||||||| |||   |||   ||||||||  ||| || ||||||||||||||||||||| |||    
T  24633498 aagcacggatacggacacggacacgacatggacactctgacacagttaataatttggaaaaatcacgtaattcaatgtaattatatgtgtcggtgttgga 24633399  T
Q  177 cacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatatt 235  Q
    |||||||| ||||| |||| || |||||||| || | | ||||| ||||||||||||||    
T  24633398 cacgacacttgtctaacaccggtacacgcctaattcga-gagtgcccgtgcttcatatt 24633341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 233
Target Start/End: Complemental strand, 4466641 - 4466541
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||| | ||| |||||||  |||||||| |||||||||| || | | ||||| ||||| |||||||| ||||| | |||||||||||||||||||    
T  4466641 agaaaatcatataattcagtgtagctatatgtgccggtgtcggatacaagatgtgtccgacactgggacacggcttattcgaggagtgtccgtgcttcat 4466542  T
Q  233 a 233  Q
    |    
T  4466541 a 4466541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 232
Target Start/End: Complemental strand, 24205082 - 24204983
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 231  Q
    ||||||| ||| ||| ||||||||||||| |||||| |||||||||| ||| |||||| |||||  |||||||||| || | ||||||||||||||||||    
T  24205082 agaaaatgacataatacagtgtaattataagtgtcg-tgtcggacactgacgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttca 24204984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 232
Target Start/End: Original strand, 25775531 - 25775624
Alignment:
Q  137 aatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||| ||| ||||||||||| | ||||||||||||||||||   |||||| |||||  |||||||||| |||| |||||||| ||||||||||    
T  25775531 aatcacataattcagtgtaattacaagtgtcggtgtcggacacg--tcgtgtccgacaccaggacacgcctaatccgaggagtgttcgtgcttcat 25775624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 29508464 - 29508567
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcg------gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgct 228  Q
    ||||||| | ||| ||||||||||||||||||||      ||||||||||||||||  ||| ||||| |||||||| || ||||||| ||||||||||||    
T  29508464 aaaatcatataattcagtgtaattatatgtgtcgatgttggtgtcggacacgacacacgtccgacaccgggacacgtctaatccaagaagtgtccgtgct 29508563  T
Q  229 tcat 232  Q
    ||||    
T  29508564 tcat 29508567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 41980862 - 41980926
Alignment:
Q  7 gaagcataggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactcgtcaa 71  Q
    |||||| | ||| |||||||||||||||||||||| |||||||| |||||||| |||||||||||    
T  41980862 gaagcagaagcaaaaaacgaacatccattccccaagaacaaaactctatcccctaaactcgtcaa 41980926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 41985636 - 41985696
Alignment:
Q  7 gaagcataggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactcg 67  Q
    |||||| | |||||||||||||||||||||||||| |||||||| |||||||| |||||||    
T  41985636 gaagcagaagcagaaaacgaacatccattccccaagaacaaaactctatcccctaaactcg 41985696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 233
Target Start/End: Original strand, 8842348 - 8842447
Alignment:
Q  134 gaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||| |||   |||||||||||| |||||||||| |||||||||| |||  || |  | ||||||||| |||| ||||||||||||||||||||    
T  8842348 gaaaatcacataatttggtgtaattatatatgtcggtgtcagacacgacacatgttagatattgagacacgcctaatccgaggagtgtccgtgcttcata 8842447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 233
Target Start/End: Complemental strand, 26492284 - 26492146
Alignment:
Q  94 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgac 193  Q
    ||||||||||| | |||||| |||| ||||||   ||| | ||||||| | ||| ||||||||||| | || ||||||||||||||||||| ||||||||    
T  26492284 gacacggacactg-acacgccgacagagctaataatttgaaaaaatcatacaattcagtgtaattacaagtatcggtgtcggacacgacacatgtctgac 26492186  T
Q  194 acggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||   |||||| || |||| |||| |||||| ||||||||    
T  26492185 accaagacacgtctaatccgaggaatgtccgcgcttcata 26492146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 34185116 - 34185053
Alignment:
Q  170 tgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||| |||| ||||| ||||| ||||||||||| |||| ||||||||||||||||||||    
T  34185116 tgtcggacaagacatgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 34185053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 14209172 - 14209242
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||||||||||||  ||||  |||| || ||| ||||||| |||||||||||||||||    
T  14209172 gtgtcggtgtcggacacgacacgtgtacgacatcgggatacacctaatccaagaagtgtccgtgcttcata 14209242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 7928470 - 7928515
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 180  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||    
T  7928470 aaaatcacataattcagtgtaattatatgtgtcggtgtcggacacg 7928515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 13414469 - 13414533
Alignment:
Q  115 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac 179  Q
    |||||| | |||| ||||||||||||| | ||| || ||||||||||||||||||||||||||||    
T  13414469 gacacaaccaaatgttttagaaaatcaaataattcaatgtaattatatgtgtcggtgtcggacac 13414533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 14216957 - 14217021
Alignment:
Q  169 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||||||  ||||| ||||||| ||| |||| || |||||||||||||||||    
T  14216957 gtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14217021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 14223086 - 14223150
Alignment:
Q  169 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||||||  ||||| ||||||| ||| |||| || |||||||||||||||||    
T  14223086 gtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14223150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 37077418 - 37077490
Alignment:
Q  164 tgtcggtgtcggacacg-acacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatatt 235  Q
    ||||||||||| ||||| || | |||| ||||||||||||| ||| ||||||||| |||||||||||||||||    
T  37077418 tgtcggtgtcgtacacggacgcatgtccgacacggggacacacctaatccaaggaatgtccgtgcttcatatt 37077490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 113 - 233
Target Start/End: Complemental strand, 51206414 - 51206294
Alignment:
Q  113 ctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatcc 212  Q
    |||||||||||||   ||| | ||||||||| ||| |||||||| || | |||||||||||||||||    || ||| ||||| |||| ||  || ||||    
T  51206414 ctgacacagctaataatttgaaaaaatcacataattcagtgtaaatacaagtgtcggtgtcggacacatgtcgcgtccgacaccgggatacctctaatcc 51206315  T
Q  213 aaggagtgtccgtgcttcata 233  Q
    |||||||||||||||||||||    
T  51206314 aaggagtgtccgtgcttcata 51206294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 9336548 - 9336611
Alignment:
Q  7 gaagcataggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactcgtca 70  Q
    |||||| | |||||||||||||||||||||||||| ||||||||| |||| || ||| ||||||    
T  9336548 gaagcagaagcagaaaacgaacatccattccccaagaacaaaaccttatctcctaaattcgtca 9336611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 15796294 - 15796224
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||| |||||||||||| |||||||||  |||| || |||||||| |||||| |||||| |||||||||||    
T  15796294 gtgtaggtgtcggacacaacacgtgtccaacaccggaacacgcctaatccaaagagtgttcgtgcttcata 15796224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 45451571 - 45451633
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacac 195  Q
    ||||||||||| | | |||| |||| |||||||||||||||||||||||||| |||| |||||    
T  45451571 agaaaatcacatacttcagtataataatatgtgtcggtgtcggacacgacacatgtccgacac 45451633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 180
Target Start/End: Complemental strand, 49505245 - 49505148
Alignment:
Q  82 agcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 180  Q
    ||||| |||| ||| |||||||||| |||||| || || |||||   ||| ||||||||||| |||  |||||||||||||||||| ||||||||||||    
T  49505245 agcacggatatggaaacggacaccg-acacgcagagaccgctaataatttgagaaaatcacataatttagtgtaattatatgtgtcagtgtcggacacg 49505148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 8383249 - 8383322
Alignment:
Q  107 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 180  Q
    ||||||| ||||| |||||   ||| ||||||||| | ||| ||||||||||||| ||||||||||||||||||    
T  8383249 gacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgtcggacacg 8383322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 9407383 - 9407444
Alignment:
Q  16 gcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactcgtcaatttcac 77  Q
    |||||||| |||||||||||| | || ||||||||||||||||| |||||| |||| |||||    
T  9407383 gcagaaaatgaacatccattcacaaagaacaaaaccctatcccctaaactcatcaacttcac 9407444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 9655456 - 9655395
Alignment:
Q  16 gcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactcgtcaatttcac 77  Q
    ||||||||||||||||| |  ||||||||||||||||||||||| ||| || |||| |||||    
T  9655456 gcagaaaacgaacatccttcgcccaaaaacaaaaccctatcccctaaattcatcaacttcac 9655395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 6780444 - 6780404
Alignment:
Q  149 cagtgtaattatatgtgtcggtgtcggacacgacacgtgtc 189  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  6780444 cagtgtaattatatgtgttggtgtcggacacaacacgtgtc 6780404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 9343853 - 9343905
Alignment:
Q  7 gaagcataggcagaaaacgaacatccattccccaaaaacaaaaccctatcccc 59  Q
    |||||| | ||||||||||||||| |||||||||| |||||||| ||||||||    
T  9343853 gaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatcccc 9343905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 10690257 - 10690193
Alignment:
Q  169 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||| |||| |||  ||||||||||    
T  10690257 gtgtcggacacaacacgtgtctgacacggcgacacacctaatccgaggaatgtatgtgcttcata 10690193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 230
Target Start/End: Original strand, 11665964 - 11666070
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-----------gacacgacacgtgtctgacacggggacacgccttatccaaggagtgtcc 223  Q
    ||||||||| |||  |||||||||||||||||||||||||           |||||||||||||||||| |  || |||||||| || ||||||||||||    
T  11665964 aaaatcacacaatttagtgtaattatatgtgtcggtgtcgtgttgatgttagacacgacacgtgtctgatatcggaacacgcctaattcaaggagtgtcc 11666063  T
Q  224 gtgcttc 230  Q
    |||||||    
T  11666064 gtgcttc 11666070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 14832158 - 14832202
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgcct 207  Q
    |||||||| |||||||||||||||||| ||||| |||||||||||    
T  14832158 gtgtcggtatcggacacgacacgtgtccgacaccgggacacgcct 14832202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 20389636 - 20389694
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacac 195  Q
    ||||||||| ||| ||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  20389636 aaaatcacataattcagtgtaat-atatgcgtcggtgtcggacac-acacgtgtctgacac 20389694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 234
Target Start/End: Complemental strand, 32804581 - 32804484
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||||| |||  ||||||||||||||||||    ||||||||||||| |||| | ||| |  | |||||| |||  |||||||||||||||||||    
T  32804581 agaaaatcacataatttagtgtaattatatgtgtc----tcggacacgacacatgtccgccactgaaaaacgcctaatctgaggagtgtccgtgcttcat 32804486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 9352918 - 9352961
Alignment:
Q  16 gcagaaaacgaacatccattccccaaaaacaaaaccctatcccc 59  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||    
T  9352918 gcagaaaacgaacatccactccccacaaacaaaaccctaccccc 9352961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 55213020 - 55213091
Alignment:
Q  162 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||||| ||| ||||||||| ||||| | ||||||| | ||||||| ||| |||||||| ||||    
T  55213020 tgtgtcggtgtcgggcacaacacgtgtccgacaccgagacacgcataatccaagaagtatccgtgctacata 55213091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 112
Target Start/End: Complemental strand, 750732 - 750698
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacacg 112  Q
    ||||||||| |||||||||||||||||||||||||    
T  750732 atgaagcacggatacggacacggacaccggacacg 750698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 4990955 - 4990913
Alignment:
Q  191 gacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||| |||||||||| |||| ||||||||||||||||||||    
T  4990955 gacacgtggacacgcctaatccgaggagtgtccgtgcttcata 4990913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 11507515 - 11507469
Alignment:
Q  134 gaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 180  Q
    |||||||||| ||| |||||||||||||||| ||||| |||||||||    
T  11507515 gaaaatcacataattcagtgtaattatatgtttcggtatcggacacg 11507469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 175
Target Start/End: Original strand, 38731232 - 38731278
Alignment:
Q  129 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgg 175  Q
    ||||| ||||||||| ||| ||||||| |||||||||||||||||||    
T  38731232 ttttaaaaaatcacataattcagtgtagttatatgtgtcggtgtcgg 38731278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 40052380 - 40052430
Alignment:
Q  183 acgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||| ||||| ||||||||||| |||| |||||||| |||||||||||    
T  40052380 acgtgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcata 40052430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 7614456 - 7614396
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgaca 194  Q
    ||||||||||| ||| |||| ||||||||| ||||||||||| ||||| |||| ||||||||    
T  7614456 agaaaatcacataattcagtataattatatatgtcggtgtcgaacacggcacg-gtctgaca 7614396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 9329844 - 9329893
Alignment:
Q  7 gaagcataggcagaaaacgaacatccattccccaaaaacaaaaccctatc 56  Q
    |||||| | |||||||||||| ||||||||||||| ||||||||| ||||    
T  9329844 gaagcagaagcagaaaacgaatatccattccccaagaacaaaaccttatc 9329893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 9646463 - 9646402
Alignment:
Q  16 gcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactcgtcaatttcac 77  Q
    ||||||||||||||||| |  || |||||||||||||||||||| ||| || |||| |||||    
T  9646463 gcagaaaacgaacatccttcgccaaaaaacaaaaccctatcccctaaattcatcaacttcac 9646402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 111
Target Start/End: Complemental strand, 17568783 - 17568750
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacac 111  Q
    ||||||||| ||||||||||||||||||||||||    
T  17568783 atgaagcacggatacggacacggacaccggacac 17568750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 1389908 - 1389956
Alignment:
Q  185 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||| |||||  ||||| |||| |||||||||||||||||||||||||    
T  1389908 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 1389956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 9448322 - 9448374
Alignment:
Q  7 gaagcataggcagaaaacgaacatccattccccaaaaacaaaaccctatcccc 59  Q
    |||||| | ||||||||||||||  |||||||||| |||||||| ||||||||    
T  9448322 gaagcagaagcagaaaacgaacagtcattccccaagaacaaaacactatcccc 9448374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 25074841 - 25074913
Alignment:
Q  162 tgtgtcggtgtcggacacga-cacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||| ||||| | | |||||| ||||| ||||||| ||| |||| |||||||| |||||||||||    
T  25074841 tgtgtcggtgtctgacaccaacgcgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcata 25074913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 171
Target Start/End: Original strand, 26508102 - 26508166
Alignment:
Q  107 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtg 171  Q
    |||||||||||||||||||   ||| | ||||||||| ||| ||||||||||| | |||||||||    
T  26508102 gacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 26508166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 27903684 - 27903756
Alignment:
Q  162 tgtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||| || ||| |||||||||||| ||  || |||| |||| || |||||||||||||||||    
T  27903684 tgtgtcggtgtcggataccgacgcgtgtctgacactggatcatgcctaatccgagaagtgtccgtgcttcata 27903756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 34910392 - 34910436
Alignment:
Q  190 tgacacggggacacgccttatccaaggagtgtccgtgcttcatat 234  Q
    |||||| |||||||| || |||| |||||||||||||||||||||    
T  34910392 tgacaccgggacacgtctaatccgaggagtgtccgtgcttcatat 34910436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 49651777 - 49651717
Alignment:
Q  173 cggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||| | || ||||| ||||||| ||| |||| || |||||||||||||||||    
T  49651777 cggacacgacacatatccgacaccgggacacacctaatccgagaagtgtccgtgcttcata 49651717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 9e-52; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 91 - 233
Target Start/End: Original strand, 24009274 - 24009413
Alignment:
Q  91 acggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtct 190  Q
    ||||| ||||||||  ||||||  ||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  24009274 acggatacggacac--gacacggcgacacagctaatttttttagaaaatcacaaaatgcagtgtaaat-tatgtgtcggtgtcggacacgacacgtgtct 24009370  T
Q  191 gacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  24009371 gacacggggacacgccttatccaaggagtgtccgtgcttcata 24009413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 20242794 - 20242668
Alignment:
Q  107 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 206  Q
    ||||||| |||||| |||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  20242794 gacacgccgacacaactaatttttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacaacacgtgtctgacacgaggacacgcc 20242695  T
Q  207 ttatccaaggagtgtccgtgcttcata 233  Q
    |||||| | ||||||| ||||||||||    
T  20242694 ttatccgaagagtgtctgtgcttcata 20242668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 105 - 233
Target Start/End: Complemental strand, 36096444 - 36096305
Alignment:
Q  105 cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggt-----------gtcggacacgacacgtgtctgac 193  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||           |||||||||||||||||||||||    
T  36096444 cggacacgccgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatttgtcggtgtcgtgtcgatgtcggacacgacacgtgtctgac 36096345  T
Q  194 acggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  36096344 acggggacacgccttaaccaaagagtgtccgtgcttcata 36096305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 110 - 232
Target Start/End: Complemental strand, 2438783 - 2438661
Alignment:
Q  110 acgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcctta 209  Q
    ||||||||||||||||   ||| | ||||||||| ||| ||||||||||| | |||||||||||||||||||||| |||| ||||| ||||||||||| |    
T  2438783 acgctgacacagctaataatttcaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaa 2438684  T
Q  210 tccaaggagtgtccgtgcttcat 232  Q
    ||| |||||||||||||||||||    
T  2438683 tccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 78 - 233
Target Start/End: Original strand, 41843405 - 41843564
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt----- 172  Q
    ||||||||| |||| | |||||||||| | |||||| |||| | ||||||||||||| |||||||| ||| | || |||||||||||||||||||         
T  41843405 atgaagcacggatatgaacacggacactg-acacgccgacaaaactaaattttttaggaaatcacataattcggtataattatatgtgtcggtgttgtgt 41843503  T
Q  173 cggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||| ||||||||||| ||||||||||||||| |||||| ||||||||| ||||||||||    
T  41843504 cggacgcgacacgtgtccgacacggggacacgctttatccgaggagtgtctgtgcttcata 41843564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 78 - 233
Target Start/End: Original strand, 37558941 - 37559095
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacacgctgacacagctaa-attttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgga 176  Q
    ||||||||| ||||||||||||||||| | |||||| ||||||||||| | ||| || ||||||||| ||| || |||||||| | ||||||||||||||    
T  37558941 atgaagcacggatacggacacggacactg-acacgccgacacagctaataatttgta-aaaatcacataattcaatgtaattacaagtgtcggtgtcgga 37559038  T
Q  177 cacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |  |||||||||| ||||| || |||||| | |||| ||||||||||||||||||||    
T  37559039 cttgacacgtgtccgacaccggtacacgcttaatccgaggagtgtccgtgcttcata 37559095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 149 - 233
Target Start/End: Original strand, 28596503 - 28596587
Alignment:
Q  149 cagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||  |||||| ||| |||| ||||||||||||||||||||    
T  28596503 cagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacactcggacactcctaatccgaggagtgtccgtgcttcata 28596587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 94 - 233
Target Start/End: Complemental strand, 34785061 - 34784912
Alignment:
Q  94 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-----------gacacgac 182  Q
    ||||||||||| | |||| | |||||| |||| ||||||||||||||||| |||  |||||||||||||||||||||||||           ||||||||    
T  34785061 gacacggacactg-acacaccgacacaactaatttttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcgtgtcggtatcggacacgac 34784963  T
Q  183 acgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    || ||||||||||||||||||||||||| | ||||||||| ||||||||||    
T  34784962 acctgtctgacacggggacacgccttattcgaggagtgtctgtgcttcata 34784912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 20694409 - 20694345
Alignment:
Q  7 gaagcataggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactcgtcaa 71  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  20694409 gaagcagaagcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaacttgtcaa 20694345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 78 - 233
Target Start/End: Complemental strand, 38117260 - 38117100
Alignment:
Q  78 atgaagcactgatacggacac-ggacac----cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt 172  Q
    ||||||||| ||||||||||| ||||||    | ||||||| |||||||||||   ||| | ||||||||| | | | ||||||||| | |||| |||||    
T  38117260 atgaagcacggatacggacaccggacacgacactgacacgccgacacagctaataatttgaaaaaatcacatacttcggtgtaattacaagtgttggtgt 38117161  T
Q  173 cggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||| ||||||||| ||||| ||||||||||| |||| ||| ||||||||||||||||    
T  38117160 cggacacaacacgtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcata 38117100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 18841080 - 18840954
Alignment:
Q  107 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 206  Q
    |||||||||||||| ||||   ||| | ||||| ||| |||  |||||||||| | ||||||||||| |||||||||| |||| ||||| ||||||| ||    
T  18841080 gacacgctgacacaactaataatttgaaaaaattacataattaagtgtaattacaagtgtcggtgtcagacacgacacatgtccgacaccgggacacacc 18840981  T
Q  207 ttatccaaggagtgtccgtgcttcata 233  Q
    | |||| ||||||||||||||||||||    
T  18840980 taatccgaggagtgtccgtgcttcata 18840954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 26769571 - 26769640
Alignment:
Q  164 tgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||| |||||||||||||||||| ||||| ||||||||||| |||| ||||||||||||||||||||    
T  26769571 tgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcata 26769640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 233
Target Start/End: Complemental strand, 34994004 - 34993923
Alignment:
Q  152 tgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||||||| |||||| |||||||| ||||| ||||| ||||||||||| || |||||||||| |||||||||||    
T  34994004 tgtaattatatgtgtcagtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttcata 34993923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 5040754 - 5040845
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 226  Q
    ||||||||| ||| || |||||||| | ||||||||||||||||||||| ||||| ||| | |||||||||||  |||||||||||||||||    
T  5040754 aaaatcacataattcaatgtaattacaagtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcctagtccaaggagtgtccgtg 5040845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 5367213 - 5367292
Alignment:
Q  136 aaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaag 215  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||| | || ||| | ||||||||||| |||||||    
T  5367213 aaatcacataattcagtgtaattatatgtgtcggtgtcggacacgacacatatccgactccgggacacgcctaatccaag 5367292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 135 - 221
Target Start/End: Original strand, 12224243 - 12224329
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgt 221  Q
    |||||| || ||| || |||||||| | ||||||||||||||||||| ||||||| ||||| ||||||||||| |||||||||||||    
T  12224243 aaaatcccataatccaatgtaattacaagtgtcggtgtcggacacgatacgtgtccgacactgggacacgcctaatccaaggagtgt 12224329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 15972893 - 15972991
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||| ||| ||| ||||||||||| | ||||||||||||||||||||||||||| ||| | ||||||| ||| |||| | || |||||||||||||||    
T  15972893 aaaattacacaattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacgccgggacacacctaatccgaagaatgtccgtgcttcata 15972991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 30717530 - 30717460
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||| |||||||||||||||||||  ||||| |||| |||||| |||||||||||||||||||||||||    
T  30717530 gtgtcgttgtcggacacgacacgtgttcgacactgggatacgcctaatccaaggagtgtccgtgcttcata 30717460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 35056927 - 35056997
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||||||||||||| |||||||  |||||||| |||  ||||||||||||||||||||    
T  35056927 gtgtcggtgtcggacacgacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttcata 35056997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 37419802 - 37419872
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||||||||||  |||||| ||||| ||||||||||| |||| ||||||||||||||||||||    
T  37419802 gtgtcggtgtcggacacgatgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 37419872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 133 - 230
Target Start/End: Complemental strand, 37411285 - 37411188
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttc 230  Q
    ||||||||||| ||| |||||| ||||||||||||| ||||| ||||||| |||||| ||||| |||||||||||  ||| ||||||| | |||||||    
T  37411285 agaaaatcacataattcagtgtgattatatgtgtcgatgtcgaacacgacgcgtgtccgacactgggacacgcctagtccgaggagtgcctgtgcttc 37411188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 19942314 - 19942382
Alignment:
Q  164 tgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| |||| |||||||||| ||||||||    
T  19942314 tgtcggtgtcggacacggcatgtgtctgacaccgggacacgcctaatccgaggagtgtccatgcttcat 19942382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 233
Target Start/End: Complemental strand, 18054772 - 18054717
Alignment:
Q  178 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||||||||||    
T  18054772 acgacacgtgtctgacacggaaacacgccttatccaaggaatgtccgtgcttcata 18054717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 168 - 233
Target Start/End: Complemental strand, 11223858 - 11223794
Alignment:
Q  168 ggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||| |||||||||| ||||||||||| |||  ||||||||||||||||||||    
T  11223858 ggtgtcggacacgacac-tgtctgacaccgggacacgcctaatctgaggagtgtccgtgcttcata 11223794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 94 - 174
Target Start/End: Complemental strand, 18054883 - 18054803
Alignment:
Q  94 gacacggacaccggacacgctgacacagctaaatttttt-agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    |||| |||||||| |||||  ||||||||||| |||||| ||||||||||||| |||||||||||||||||||| |||||||    
T  18054883 gacagggacaccg-acacgtcgacacagctaattttttttagaaaatcacaaactgcagtgtaattatatgtgttggtgtcg 18054803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 42511387 - 42511323
Alignment:
Q  169 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||| ||||||||| ||||| |||||||| || |||| ||||||||||||||||||||    
T  42511387 gtgtcggacacaacacgtgtccgacacagggacacggctaatccgaggagtgtccgtgcttcata 42511323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 32749825 - 32749755
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||| ||||||||  |||| ||||| ||||| ||||||||||||||| |||||||||||| ||||||||    
T  32749825 gtgtcgatgtcggacgtgacatgtgtccgacactgggacacgccttatctaaggagtgtccgcgcttcata 32749755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 20922975 - 20922922
Alignment:
Q  127 ttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 180  Q
    ||||||||||||||||| |||  |||||||||||||||||| ||||||||||||    
T  20922975 ttttttagaaaatcacataatttagtgtaattatatgtgtctgtgtcggacacg 20922922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 107 - 227
Target Start/End: Original strand, 21624258 - 21624374
Alignment:
Q  107 gacacgctgacacagctaa-attttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgc 205  Q
    ||||||| ||||||||||| | |||| | |||||  || ||| ||||||||||| | ||||||||||||||||||     |||| ||||  ||||||| |    
T  21624258 gacacgccgacacagctaataattttaaaaaaatagcataattcagtgtaattacaagtgtcggtgtcggacacg-----tgtccgacagcgggacacac 21624352  T
Q  206 cttatccaaggagtgtccgtgc 227  Q
    || |||||||||||||||||||    
T  21624353 ctaatccaaggagtgtccgtgc 21624374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 27084318 - 27084387
Alignment:
Q  164 tgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||||||||||||  |||| | ||||||||| |||  |||||||||  |||||||||    
T  27084318 tgtcggtgtcggacacgacacgtgtccaacaccgagacacgcctaatcggaggagtgtctctgcttcata 27084387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 233
Target Start/End: Complemental strand, 34007016 - 34006931
Alignment:
Q  149 cagtgtaattatatgtgtcggtgtcggacacg-acacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||| ||| |||||||||| ||||||  |  |||||||||||| || |||| ||| || ||||||||||||||||||||||    
T  34007016 cagtgtaatcataggtgtcggtgtgggacacctattcgtgtctgacaccggaacacacctaattcaaggagtgtccgtgcttcata 34006931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 34691844 - 34691799
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 180  Q
    ||||||| | ||| ||||||||||||||||||||||||||||||||    
T  34691844 aaaatcatataattcagtgtaattatatgtgtcggtgtcggacacg 34691799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 34714256 - 34714211
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 180  Q
    ||||||| | ||| ||||||||||||||||||||||||||||||||    
T  34714256 aaaatcatataattcagtgtaattatatgtgtcggtgtcggacacg 34714211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 234
Target Start/End: Complemental strand, 18255980 - 18255944
Alignment:
Q  198 ggacacgccttatccaaggagtgtccgtgcttcatat 234  Q
    |||||||||| ||||||||||||||||||||||||||    
T  18255980 ggacacgcctaatccaaggagtgtccgtgcttcatat 18255944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 166
Target Start/End: Original strand, 21616742 - 21616813
Alignment:
Q  94 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgt 166  Q
    ||||||||||| |||||||| ||||| |||||   ||| ||||||||||| ||| ||||||||||||||||||    
T  21616742 gacacggacac-ggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 23354652 - 23354581
Alignment:
Q  163 gtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatat 234  Q
    ||||||| ||||||||| |||  |||||||||||||| |||||||| |||| ||||||||||||| |||||||    
T  23354652 gtgtcggggtcggacaccgaccggtgtctgacacggg-acacgcctaatccgaggagtgtccgtggttcatat 23354581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 30404889 - 30404829
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacac 195  Q
    ||||||||| ||| ||||||||||| | ||||||| |||||||||||||| |||| |||||    
T  30404889 aaaatcacataattcagtgtaattacaagtgtcggcgtcggacacgacacatgtccgacac 30404829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 43586063 - 43585971
Alignment:
Q  116 acacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcctt 208  Q
    |||||| |||| |||| ||||||| ||| ||| || |||||| | | ||||||||||||||||||| ||||||| |||||  |||||| ||||    
T  43586063 acacagataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcagacacatggacacacctt 43585971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 107 - 174
Target Start/End: Complemental strand, 15909699 - 15909632
Alignment:
Q  107 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    ||||||| || ||||||||| |||| ||||||| ||| ||| ||||||||||||||||| | ||||||    
T  15909699 gacacgccgatacagctaaaattttgagaaaattacataattcagtgtaattatatgtgacagtgtcg 15909632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 22084830 - 22084757
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctga---cacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||| ||||||||||| ||||||||||||   ||| ||||||||||| |||| | ||||||| ||||||||||    
T  22084830 gtgtcagtgtcggacacaacacgtgtctgacaccaccgggacacgcctaatccgatgagtgtctgtgcttcata 22084757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 214
Target Start/End: Original strand, 31808097 - 31808176
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaa 214  Q
    ||||||||| ||| ||||||||||||||||||| |||| | ||||||||| |||  |||||  |||||| ||| ||||||    
T  31808097 aaaatcacataattcagtgtaattatatgtgtcagtgttgaacacgacacatgttcgacacctggacacacctaatccaa 31808176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 173
Target Start/End: Complemental strand, 11223930 - 11223864
Alignment:
Q  107 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtc 173  Q
    |||||||||||||||||||  |||| | ||||| ||| ||| ||||||||||| | |||||||||||    
T  11223930 gacacgctgacacagctaatattttgaaaaaataacataattcagtgtaattacaagtgtcggtgtc 11223864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 15657930 - 15657992
Alignment:
Q  170 tgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    |||||||| ||||||||||| ||| | |||||||||||  ||| |||||||||| ||||||||    
T  15657930 tgtcggacgcgacacgtgtccgacgccgggacacgcctagtccgaggagtgtccatgcttcat 15657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 112
Target Start/End: Complemental strand, 21374807 - 21374773
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacacg 112  Q
    ||||||||| |||||||||||||||||||||||||    
T  21374807 atgaagcacggatacggacacggacaccggacacg 21374773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 23354995 - 23354926
Alignment:
Q  163 gtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||| || |||||| ||| ||||||||||||||| |||||||| |||| |||||||||| ||||||||    
T  23354995 gtgtcggggttggacaccgacccgtgtctgacacggg-acacgcctaatccgaggagtgtccttgcttcat 23354926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 112
Target Start/End: Original strand, 26769463 - 26769497
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacacg 112  Q
    ||||||||| |||||||||||||||||||||||||    
T  26769463 atgaagcacggatacggacacggacaccggacacg 26769497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 221
Target Start/End: Complemental strand, 29176528 - 29176446
Alignment:
Q  139 tcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgt 221  Q
    ||||| ||| ||||||||||||| |||| ||||| ||||||| ||| |||| ||||| | ||||| ||| ||||||| |||||    
T  29176528 tcacataattcagtgtaattataagtgttggtgttggacacggcacatgtccgacactgagacacacctaatccaagaagtgt 29176446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 44860379 - 44860449
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||| ||||| |||||||||| ||||| ||||  ||||||| ||| || | ||||||||||||||||||||    
T  44860379 gtgttggtgttggacacgacatgtgtccgacatcgggacacacctaattcgaggagtgtccgtgcttcata 44860449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 19536436 - 19536391
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 180  Q
    ||||||||| ||| ||||||||||| | ||||||||||||||||||    
T  19536436 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 19536391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 31284041 - 31284118
Alignment:
Q  108 acacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattat-atgtgtcggtgtcggacacgacac 184  Q
    |||||| ||||| |||||   ||| ||||||||||| ||| || ||||||||| |||||||||||| |||||||||||    
T  31284041 acacgccgacactgctaataatttgagaaaatcacataatccattgtaattattatgtgtcggtgttggacacgacac 31284118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 44860338 - 44860379
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    |||||||| || ||| ||||||||||||||||||||||||||    
T  44860338 agaaaatcgcataattcagtgtaattatatgtgtcggtgtcg 44860379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 230
Target Start/End: Original strand, 6940235 - 6940370
Alignment:
Q  94 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgac 193  Q
    ||||||||||| | |||||| |||||||||||   ||||| ||| | ||| |||  |||||||||| | |||||||| || |||||||||||||||  ||    
T  6940235 gacacggacactg-acacgccgacacagctaataattttaaaaagttacataattaagtgtaattacaagtgtcggtatccgacacgacacgtgtccaac 6940333  T
Q  194 acggggacacgccttatccaaggagtgtccgtgcttc 230  Q
    ||   ||||| ||| ||| || || ||||||||||||    
T  6940334 accaagacacacctaatcaaatgattgtccgtgcttc 6940370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 10535734 - 10535686
Alignment:
Q  185 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||  |||||||||| |||| |||||||| |||||||||||    
T  10535734 gtgtctgacaccaggacacgcctaatccgaggagtgttcgtgcttcata 10535686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 14996222 - 14996171
Alignment:
Q  170 tgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtc 222  Q
    |||||||||| ||||||||||||||| || |||||||| |||| |||||||||    
T  14996222 tgtcggacac-acacgtgtctgacaccggaacacgcctaatccgaggagtgtc 14996171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 18889632 - 18889592
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtc 173  Q
    ||||||||||| ||| ||||||||| |||||||||||||||    
T  18889632 agaaaatcacataattcagtgtaatcatatgtgtcggtgtc 18889592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 110
Target Start/End: Complemental strand, 27447114 - 27447082
Alignment:
Q  78 atgaagcactgatacggacacggacaccggaca 110  Q
    ||||||||| |||||||||||||||||||||||    
T  27447114 atgaagcacggatacggacacggacaccggaca 27447082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 168
Target Start/End: Original strand, 28524419 - 28524479
Alignment:
Q  108 acacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcg 168  Q
    |||||| || ||||||||| ||||  | |||||||| ||| ||||||||||||||||||||    
T  28524419 acacgccgatacagctaaaattttgtgcaaatcacataattcagtgtaattatatgtgtcg 28524479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 110
Target Start/End: Original strand, 31283994 - 31284026
Alignment:
Q  78 atgaagcactgatacggacacggacaccggaca 110  Q
    ||||||||| |||||||||||||||||||||||    
T  31283994 atgaagcacagatacggacacggacaccggaca 31284026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 38355928 - 38355888
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtc 173  Q
    ||||||||||| ||| |||||| ||||||||||||||||||    
T  38355928 agaaaatcacataattcagtgtgattatatgtgtcggtgtc 38355888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 40361778 - 40361738
Alignment:
Q  150 agtgtaattatatgtgtcggtgtcggacacgacacgtgtct 190  Q
    ||||||||||||| ||| |||||| ||||||||||||||||    
T  40361778 agtgtaattatatctgttggtgtcagacacgacacgtgtct 40361738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 5e-50; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 94 - 233
Target Start/End: Complemental strand, 43737892 - 43737752
Alignment:
Q  94 gacacggacaccgg-acacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctga 192  Q
    |||||||||||||  |||||| | |||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  43737892 gacacggacaccgacacacgccggcacagctaaattttcttgaaaatcacaaaatacagtgtaattatatgtgtcggtgtcggacacgacaggtgtctga 43737793  T
Q  193 cacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  43737792 cacggggatacgccttatccaaggagtgtccgtgcttcata 43737752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 115 - 233
Target Start/End: Complemental strand, 3951596 - 3951477
Alignment:
Q  115 gacacagctaaattttttagaaaa-tcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatcca 213  Q
    ||||||||||||||||| | |||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||    
T  3951596 gacacagctaaatttttaaaaaaaatcacaaaatgcagtgtacttatatgtgtcggtgtcagacacgacacgtgtctgacacgggaacacgcctaatcca 3951497  T
Q  214 aggagtgtccgtgcttcata 233  Q
    |||||| |||||||||||||    
T  3951496 aggagtttccgtgcttcata 3951477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 94 - 233
Target Start/End: Complemental strand, 34451116 - 34450962
Alignment:
Q  94 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg----------------gac 177  Q
    ||||||| ||||| |||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||                |||    
T  34451116 gacacgggcaccg-acacactgacacagctaattttttttgaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcgtgtcggtgtcggac 34451018  T
Q  178 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34451017 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 34450962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 133 - 232
Target Start/End: Original strand, 3025569 - 3025668
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||||| ||| ||||||||||||| ||||| ||||||||||||||||||||||||||| | |||||| || |||| |||||||||||||||||||    
T  3025569 agaaaatcacataattcagtgtaattataggtgtcagtgtcggacacgacacgtgtctgacactgtgacacggctaatccgaggagtgtccgtgcttcat 3025668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 78 - 233
Target Start/End: Complemental strand, 36450849 - 36450695
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 177  Q
    ||||||||| ||||||||||||||||| | |||||| |||||| ||||   ||| | ||||||||| ||| ||||||||||| | |||| ||||||||||    
T  36450849 atgaagcacggatacggacacggacactg-acacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgtaggtgtcggac 36450751  T
Q  178 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||| |||||| |||||  |||||||||| |||| ||||||||| ||||||||||    
T  36450750 acgacgcgtgtccgacaccaggacacgcctaatccgaggagtgtctgtgcttcata 36450695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 133 - 233
Target Start/End: Complemental strand, 33405425 - 33405325
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    |||||| |||| |||  ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||| || |||||| ||||||||||||| |||    
T  33405425 agaaaaacacataatttagtgtaattatatgtgtcggtgtcggacacgacacatgtctgacacctggacacggctaatccaatgagtgtccgtgctccat 33405326  T
Q  233 a 233  Q
    |    
T  33405325 a 33405325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 149 - 232
Target Start/End: Complemental strand, 926813 - 926730
Alignment:
Q  149 cagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||||||| ||||||||||||||| ||||||||||| ||||| |||||| || |||||| |||||||||||||||||||    
T  926813 cagtgtaattataagtgtcggtgtcggacgcgacacgtgtccgacaccgggacatgctttatccgaggagtgtccgtgcttcat 926730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 26902217 - 26902105
Alignment:
Q  132 tagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-----------gacacgacacgtgtctgacacggggacacgccttatccaaggagtg 220  Q
    |||||||||||| ||| ||||||||||||||||||||||||||           ||||||||||||||||| |||||||||||||||||||  |||||||    
T  26902217 tagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtatgagtgtcggacacgacacgtgtctggcacggggacacgccttatctgaggagtg 26902118  T
Q  221 tccgtgcttcata 233  Q
    |||||||||||||    
T  26902117 tccgtgcttcata 26902105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 78 - 233
Target Start/End: Original strand, 14134663 - 14134817
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 177  Q
    ||||||||| ||||||||||| ||||| |||||||  ||||   ||||   ||| ||||||||||| ||| |||||||||||||| ||||||||||  ||    
T  14134663 atgaagcacggatacggacaccgacac-ggacacgtcgacaatactaataatttgagaaaatcacataattcagtgtaattatatatgtcggtgtcaaac 14134761  T
Q  178 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||| | |||  |||||||||| || | ||||||||||||| ||||||    
T  14134762 acgacacgtgtccgtcaccaggacacgcctaattcgaggagtgtccgtgtttcata 14134817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 133 - 232
Target Start/End: Complemental strand, 20679436 - 20679337
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||||| | | ||||||||||||| ||||||||||| ||| | ||||||||| ||||| ||||||||||||| || |||||||||| ||||||||    
T  20679436 agaaaatcacatagttcagtgtaattataagtgtcggtgtcagacgcaacacgtgtccgacaccgggacacgccttaaccgaggagtgtccatgcttcat 20679337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 78 - 229
Target Start/End: Complemental strand, 31109613 - 31109463
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 177  Q
    |||||||||||||| |||||||||||| | |||||| ||||| | |||   ||| ||||||||| | ||| |||| ||| |||||||||| |||||||||    
T  31109613 atgaagcactgatatggacacggacactg-acacgccgacaccgttaataatttgagaaaatcaaacaattcagtctaactatatgtgtcagtgtcggac 31109515  T
Q  178 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 229  Q
    | |   ||||| |||||| ||||||||||| |||| ||||||||||||||||    
T  31109514 atgtgtcgtgtatgacactgggacacgcctaatccgaggagtgtccgtgctt 31109463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 133 - 231
Target Start/End: Original strand, 40332209 - 40332307
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 231  Q
    ||||||||||| ||| ||||||||||| | |||||||||| ||||||||||||||||  |||| ||||| ||||| |||| ||||||||||||| ||||    
T  40332209 agaaaatcacataattcagtgtaattacaagtgtcggtgtgggacacgacacgtgtcccacaccgggacgcgcctaatccgaggagtgtccgtgtttca 40332307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 29447109 - 29447040
Alignment:
Q  164 tgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||||||||||| |||||||||||  |||||||||| |||| ||||||||||||||||||||    
T  29447109 tgtcggtgtcggacacgacatgtgtctgacaccaggacacgcctaatcctaggagtgtccgtgcttcata 29447040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 230
Target Start/End: Original strand, 5813569 - 5813707
Alignment:
Q  91 acggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtct 190  Q
    ||||| |||||||| |||||||| |||||||||||   ||| | ||| ||||| | |  ||||||| || | |||||||||||||||||||||||||||     
T  5813569 acggatacggacac-ggacacgccgacacagctaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtcggacacgacacgtgtcc 5813667  T
Q  191 gacacggggacacgccttatccaaggagtgtccgtgcttc 230  Q
    ||||| ||||||||||| ||   |||||||||||||||||    
T  5813668 gacaccgggacacgcctaattggaggagtgtccgtgcttc 5813707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 22652035 - 22652105
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||||||| ||||| ||||| |||||||| || |||| ||||||||||||||||||||    
T  22652035 gtgtcggtgtcggacacgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcata 22652105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 29510304 - 29510234
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||||||||||| |||||| ||||| ||||||| ||| |||| ||||||||||||||||||||    
T  29510304 gtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 29510234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 233
Target Start/End: Complemental strand, 4786379 - 4786279
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||||| ||| |||||||||||||||||||||||||||| |||||| ||||  || |  | |||| | ||||| ||| |||||||||||||||||    
T  4786379 agaaaatcacataattcagtgtaattatatgtgtcggtgtcggatacgacatgtgttcgataacgagacatggcttattcaaagagtgtccgtgcttcat 4786280  T
Q  233 a 233  Q
    |    
T  4786279 a 4786279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 133 - 233
Target Start/End: Complemental strand, 37283851 - 37283756
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||||| ||| ||||||||||||  |||||||||| |||||||||||||||||   || |||||||| || |||| ||||||| |||||||||||    
T  37283851 agaaaatcacataattcagtgtaattat--gtgtcggtgtgggacacgacacgtgtct---accgggacacgtctaatccgaggagtgcccgtgcttcat 37283757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 226
Target Start/End: Complemental strand, 126369 - 126295
Alignment:
Q  152 tgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 226  Q
    |||||||||||||||| |||||||||||||||||||||  | || |||||||| || |||| |||||||||||||    
T  126369 tgtaattatatgtgtcagtgtcggacacgacacgtgtccaataccgggacacggctaatccgaggagtgtccgtg 126295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 18407739 - 18407837
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||| ||| ||||||||||| | |||||| || |||||||||||| |||| |||||  |||||||||| ||   ||||||||||||||||||||    
T  18407739 aaaatcacataattcagtgtaattacaagtgtcgctgccggacacgacacatgtccgacactaggacacgcctaattggaggagtgtccgtgcttcata 18407837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 31557016 - 31557114
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||| ||| ||||||||||| | || |||||||| |||||||||| |||| |||||  |||||||||| |||||||| |||||| ||| |||||    
T  31557016 aaaatcacataattcagtgtaattacaagtttcggtgtcagacacgacacatgtccgacaccaggacacgcctaatccaaggtgtgtccatgcctcata 31557114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 233
Target Start/End: Original strand, 18964184 - 18964308
Alignment:
Q  122 ctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt-------cgg------acacgacacgtgtctgacacggggacacgcctt 208  Q
    |||| ||||||||||||||||| ||| || |||||||||||||||||||||       |||      ||||||||| ||||| |||||| ||||||||||    
T  18964184 ctaatttttttagaaaatcacataattcaatgtaattatatgtgtcggtgtgtcgtgtcggcgttgaacacgacacctgtctaacacggagacacgcctt 18964283  T
Q  209 atccaaggagtgtccgtgcttcata 233  Q
    |||| ||||||||| ||||||||||    
T  18964284 atccgaggagtgtctgtgcttcata 18964308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 13844665 - 13844591
Alignment:
Q  105 cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac 179  Q
    ||||||||| ||||| |||||   ||| ||||||||||| |||  ||||||||||||||||||||||||||||||    
T  13844665 cggacacgccgacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtcggacac 13844591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 15816129 - 15816059
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||| ||||||||||||||||||  || ||||| ||||||||||| |||| || |||||||||||||||||    
T  15816129 gtgttggtgtcggacacgacacgaatccgacaccgggacacgcctaatccgagaagtgtccgtgcttcata 15816059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 8343381 - 8343445
Alignment:
Q  169 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||| ||||||||||||||| ||||| ||||||||||| |||| | ||||||| ||||||||||    
T  8343381 gtgtccgacacgacacgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcata 8343445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 16641974 - 16641910
Alignment:
Q  169 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||| |||||| |||| ||||||| ||| |||| ||||||||| ||||||||||    
T  16641974 gtgtcggacacgacatgtgtctaacaccgggacacacctaatccgaggagtgtctgtgcttcata 16641910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 24205820 - 24205748
Alignment:
Q  162 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatat 234  Q
    ||||||||||||| |||| || | |||||||||| || |||||||| |||| ||||||||||||| |||||||    
T  24205820 tgtgtcggtgtcgaacacaacgcatgtctgacaccggaacacgcctaatccgaggagtgtccgtgtttcatat 24205748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 31236646 - 31236570
Alignment:
Q  105 cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacga 181  Q
    ||||||||| ||||| |||||   ||| ||||||||||| ||| || |||||||||||||||||||| |||||||||    
T  31236646 cggacacgccgacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgacggacacga 31236570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 6065650 - 6065587
Alignment:
Q  170 tgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||| |||| ||||| || |||||| | || ||||||||||||||||||||||    
T  6065650 tgtcggacacgacacatgtccgacaccggaacacgcataattcaaggagtgtccgtgcttcata 6065587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 21465471 - 21465541
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||| |||||||||||||||||||||  |||| |||| |||||| ||   ||||||||||||||||||||    
T  21465471 gtgtcagtgtcggacacgacacgtgtccaacacagggatacgcctaatttgaggagtgtccgtgcttcata 21465541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 28745557 - 28745627
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||||||||||||| |||| | ||| | |||| | || || ||||||||||||||||||||||    
T  28745557 gtgtcggtgtcggacacgacacctgtccgtcaccgagacaagtctaattcaaggagtgtccgtgcttcata 28745627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 29447503 - 29447573
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||| ||||||||| ||||| ||||| |||||| | || |||  ||||||||||||||||||||    
T  29447503 gtgtcggtgtcagacacgacatgtgtccgacaccgggacaggtctaatcggaggagtgtccgtgcttcata 29447573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 34897103 - 34897149
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac 179  Q
    ||||||||||| ||| |||||||||||||||||||| ||||||||||    
T  34897103 agaaaatcacataattcagtgtaattatatgtgtcgatgtcggacac 34897149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 233
Target Start/End: Complemental strand, 24413605 - 24413500
Alignment:
Q  128 tttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgc 227  Q
    |||| ||||||  ||| ||| ||| ||||||||| ||||| |||||||||||||  ||||||  |||  |||||||| || |||| || |||||||||||    
T  24413605 ttttgagaaaaatacataattcagggtaattataagtgtcagtgtcggacacgatgcgtgtccaacagcgggacacgtctaatccgagaagtgtccgtgc 24413506  T
Q  228 ttcata 233  Q
    ||||||    
T  24413505 ttcata 24413500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 8293859 - 8293931
Alignment:
Q  149 cagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgt 221  Q
    |||||||||||||||||||||||||  ||| ||||| | ||||||||  |||||| ||| |||| ||||||||    
T  8293859 cagtgtaattatatgtgtcggtgtcaaacatgacacatatctgacacctggacacacctaatccgaggagtgt 8293931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 22943349 - 22943301
Alignment:
Q  174 ggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtc 222  Q
    |||||||||||||||| ||||| ||||||||||| |||| |||||||||    
T  22943349 ggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtc 22943301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 233
Target Start/End: Original strand, 39820464 - 39820546
Alignment:
Q  150 agtgtaattatatgtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||| ||| |||||| |||||||||| ||| |||||| |||||||| |||||||| |||| || |||||||||||||||||    
T  39820464 agtgtaatcataggtgtcg-tgtcggacaccgacgcgtgtccgacacggg-acacgcctaatccgagaagtgtccgtgcttcata 39820546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 4673418 - 4673355
Alignment:
Q  170 tgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||| | | || ||||| || |||||||| |||||||||||||| ||||||||||    
T  4673418 tgtcggacacgacgcatatccgacaccggaacacgcctaatccaaggagtgtctgtgcttcata 4673355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 11803317 - 11803388
Alignment:
Q  162 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||| ||||| ||| ||||||| |||| ||||| || ||||| || |||| ||||||||||||||||||||    
T  11803317 tgtgttggtgttggatacgacacatgtccgacacaggtacacgtctaatccgaggagtgtccgtgcttcata 11803388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 174
Target Start/End: Complemental strand, 11927125 - 11927086
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    ||||||||| ||| ||||||||||||||||||||||||||    
T  11927125 aaaatcacataattcagtgtaattatatgtgtcggtgtcg 11927086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 78 - 189
Target Start/End: Original strand, 22595952 - 22596068
Alignment:
Q  78 atgaagcactgatacggacac-ggacac----cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt 172  Q
    ||||||||| ||||||||||| ||||||    | ||||||| |||||||||||   ||| | ||||| ||| ||| ||||||||||| | |||| |||||    
T  22595952 atgaagcacggatacggacaccggacacaacactgacacgccgacacagctaataatttaaaaaaataacataattcagtgtaattacaagtgttggtgt 22596051  T
Q  173 cggacacgacacgtgtc 189  Q
    ||||| |||||||||||    
T  22596052 cggacgcgacacgtgtc 22596068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 38079017 - 38079088
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacg 204  Q
    |||||||||||  || ||||||||||||||| |||| ||||||||||||| | |||| ||||| ||| ||||    
T  38079017 agaaaatcacatgattcagtgtaattatatgcgtcgatgtcggacacgacgcatgtccgacaccgggccacg 38079088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 4948672 - 4948718
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacga 181  Q
    ||||||||| ||| ||||||||||| | |||||||||||||||||||    
T  4948672 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacga 4948718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 8847277 - 8847315
Alignment:
Q  136 aaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    |||||||| ||| ||||||||||||||||||||||||||    
T  8847277 aaatcacataattcagtgtaattatatgtgtcggtgtcg 8847315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 13436953 - 13436911
Alignment:
Q  191 gacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||| ||||||||||| |||||||||||||| ||||||||||    
T  13436953 gacaccgggacacgcctaatccaaggagtgtctgtgcttcata 13436911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 20873089 - 20873143
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtc 189  Q
    ||||||||| |||  |||||||||| | ||||||||||||||||||| |||||||    
T  20873089 aaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgatacgtgtc 20873143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 209
Target Start/End: Complemental strand, 26915246 - 26915200
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgcctta 209  Q
    ||||||||||||||||||| ||||||| ||||  |||||||||||||    
T  26915246 gtgtcggtgtcggacacgatacgtgtcagacattgggacacgcctta 26915200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 234
Target Start/End: Complemental strand, 13009459 - 13009422
Alignment:
Q  197 gggacacgccttatccaaggagtgtccgtgcttcatat 234  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  13009459 gggacacgcctaatccaaggagcgtccgtgcttcatat 13009422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 9414912 - 9414860
Alignment:
Q  137 aatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtc 189  Q
    ||||||| ||| ||||| ||||||| |||| |||||| |||||||||||||||    
T  9414912 aatcacataattcagtgcaattataagtgttggtgtcagacacgacacgtgtc 9414860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 22197736 - 22197676
Alignment:
Q  169 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 229  Q
    |||||||||| |||||||||| ||||| ||  ||||||| |||  ||||||||||||||||    
T  22197736 gtgtcggacatgacacgtgtccgacaccggatcacgcctaatctgaggagtgtccgtgctt 22197676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 28747482 - 28747430
Alignment:
Q  127 ttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac 179  Q
    ||||||||||||||| | |   || ||||||||||||||||||||||||||||    
T  28747482 ttttttagaaaatcagatagctcaatgtaattatatgtgtcggtgtcggacac 28747430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 44462215 - 44462151
Alignment:
Q  154 taattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggag 218  Q
    |||| ||||||||||||||| ||||||| || |||| ||||| |||||||| || |||| |||||    
T  44462215 taatcatatgtgtcggtgtcagacacgatacatgtccgacaccgggacacgtctaatccgaggag 44462151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 44469748 - 44469684
Alignment:
Q  154 taattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggag 218  Q
    |||| ||||||||||||||| ||||||| || |||| ||||| |||||||| || |||| |||||    
T  44469748 taatcatatgtgtcggtgtcagacacgatacatgtccgacaccgggacacgtctaatccgaggag 44469684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 8e-43; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 94 - 233
Target Start/End: Original strand, 6401478 - 6401627
Alignment:
Q  94 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt-----------cggacacgac 182  Q
    ||||||||||||| |||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||           ||||||||||    
T  6401478 gacacggacaccg-acacgccgacacaactaaattttttagaaaatcacaaaatacagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacgac 6401576  T
Q  183 acgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6401577 acgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcata 6401627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 107 - 230
Target Start/End: Complemental strand, 30099105 - 30098982
Alignment:
Q  107 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 206  Q
    ||||||| |||||| |||||||||||| | |||| || ||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  30099105 gacacgccgacacaactaaattttttaaacaatcgcataattctgtgtaattatatgtgtcggtgtcggatacgacacgtgtctgacacggggacacgcc 30099006  T
Q  207 ttatccaaggagtgtccgtgcttc 230  Q
    ||||||||||||||| ||||||||    
T  30099005 ttatccaaggagtgttcgtgcttc 30098982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 106 - 233
Target Start/End: Original strand, 21814252 - 21814390
Alignment:
Q  106 ggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatat-----------gtgtcggtgtcggacacgacacgtgtctgaca 194  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||| ||    
T  21814252 ggacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtctggca 21814351  T
Q  195 cggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  21814352 cggggacacgccttatccaaggaatgttcgtgcttcata 21814390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 135 - 233
Target Start/End: Complemental strand, 21576784 - 21576686
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||| ||| ||||||||||| | |||||| |||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  21576784 aaaatcacataattcagtgtaattacaagtgtcgatgtcggacacgacacgtgtctgacactgggacacgcctaatccgaggagtgtccgtgcttcata 21576686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 130 - 233
Target Start/End: Original strand, 42029767 - 42029870
Alignment:
Q  130 tttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 229  Q
    |||||||||||||| ||| || ||||||||||||| ||||||||||||||||||| |||||| ||||  |||||||||||||| |||||||||||||| |    
T  42029767 tttagaaaatcacataattcaatgtaattatatgtatcggtgtcggacacgacacatgtctgtcacgtagacacgccttatccgaggagtgtccgtgcat 42029866  T
Q  230 cata 233  Q
    ||||    
T  42029867 cata 42029870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 133 - 232
Target Start/End: Complemental strand, 30502429 - 30502330
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||||  ||| |||||||||||||||||||||||||||||||||||| |||| ||||| |||||| |||| ||||||||| ||| ||||||||||    
T  30502429 agaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30502330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 133 - 232
Target Start/End: Complemental strand, 30542772 - 30542673
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||||  ||| |||||||||||||||||||||||||||||||||||| |||| ||||| |||||| |||| ||||||||| ||| ||||||||||    
T  30542772 agaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30542673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 94 - 232
Target Start/End: Complemental strand, 21191135 - 21190998
Alignment:
Q  94 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgac 193  Q
    ||||||||||| | ||| || |||||||||||   ||| | ||||||||| ||| ||||||||||| | ||||||||||||||||| ||||||||| |||    
T  21191135 gacacggacactg-acatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccgac 21191037  T
Q  194 acggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
     | ||||||||||| |||| |||||||||||||||||||    
T  21191036 tccgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 78 - 173
Target Start/End: Complemental strand, 32426965 - 32426870
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtc 173  Q
    ||||||||  |||||||||||||||||||||| | | ||||| ||||||||||||||||||||||| ||| || ||||||||| ||||||||||||    
T  32426965 atgaagcatggatacggacacggacaccggacgcaccgacacggctaaattttttagaaaatcacataattcattgtaattatttgtgtcggtgtc 32426870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 43564901 - 43564999
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||| |||  |||||||||||| ||||||||||||||||||||| ||||| ||| | ||||||||||| |||| || |||||||||||||||||    
T  43564901 aaaatcacataatttagtgtaattataagtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcctaatccgagaagtgtccgtgcttcata 43564999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 133 - 233
Target Start/End: Complemental strand, 28588715 - 28588615
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||||| ||| ||||||||||||| |||||||||||||||||||||| | ||||||||  |||||||| | |||| | |||||||| ||||||||    
T  28588715 agaaaatcacataattcagtgtaattataggtgtcggtgtcggacacgacacatatctgacaccaggacacgcttaatccgaagagtgtccatgcttcat 28588616  T
Q  233 a 233  Q
    |    
T  28588615 a 28588615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 231
Target Start/End: Complemental strand, 19453125 - 19452998
Alignment:
Q  115 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-----------gacacgacacgtgtctgacacggggacac 203  Q
    ||||||| |||||||||||||||||||||||||  |  ||||||||||||||||||||||           |||||||||| ||||| |||||| || ||    
T  19453125 gacacagttaaattttttagaaaatcacaaaatataccgtaattatatgtgtcggtgtcgtgtcaatgtcggacacgacacatgtctcacacggagatac 19453026  T
Q  204 gccttatccaaggagtgtccgtgcttca 231  Q
    ||||||||||||||| ||||||||||||    
T  19453025 gccttatccaaggagcgtccgtgcttca 19452998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 39268613 - 39268541
Alignment:
Q  159 atatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 231  Q
    |||||||||||||| |||||||||| ||||| ||||| ||||||||||| |||| ||||||||||||||||||    
T  39268613 atatgtgtcggtgttggacacgacatgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 170
Target Start/End: Original strand, 39758272 - 39758327
Alignment:
Q  115 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggt 170  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  39758272 gacacagctaaattttttagaaaatcacataattcagtgtaattatatgtgtcggt 39758327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 21522809 - 21522879
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||| |||||| |||||||||||| |||||    
T  21522809 gtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcata 21522879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 21533375 - 21533445
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||| |||||| |||||||||||| |||||    
T  21533375 gtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcata 21533445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 21542089 - 21542159
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||  ||||||||| ||||||||| |||||    
T  21542089 gtgtcggtgtcggacacgacacgtgtccgacaccgggacacgccgaatccaaggaatgtccgtgcatcata 21542159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 133 - 238
Target Start/End: Original strand, 17123066 - 17123170
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||||| |||  |||  |||||||| ||||||||| |||||||| || |||| |||||||| |||||||| |||| |||||||||||||||||||    
T  17123066 agaaaatcacataatcaagtacaattatatatgtcggtgttggacacgaaacatgtccgacacggg-acacgcctaatccgaggagtgtccgtgcttcat 17123164  T
Q  233 attttc 238  Q
    | ||||    
T  17123165 agtttc 17123170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 229
Target Start/End: Complemental strand, 21194164 - 21194068
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 229  Q
    |||||||||||  || ||||||||||||| || | ||||| ||||||||||| |||| ||||| ||| ||||||| |||| ||||||||||||||||    
T  21194164 agaaaatcacatcattcagtgtaattataggtattggtgttggacacgacacatgtcagacaccggggcacgcctaatccgaggagtgtccgtgctt 21194068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 26312803 - 26312875
Alignment:
Q  149 cagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgt 221  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||  |||||| ||| |||| ||||||||    
T  26312803 cagtgtaattatatgtatcggtgtcggacacgatacgtgtctgacaccaggacacacctaatccgaggagtgt 26312875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 105 - 233
Target Start/End: Original strand, 42893350 - 42893478
Alignment:
Q  105 cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacg 204  Q
    ||||||| | |||||||||||   ||| | ||||||||| ||| ||||||||||| | ||||||||||| ||||| ||||||||| |||||  |||||||    
T  42893350 cggacacaccgacacagctaataatttgaaaaaatcacataatccagtgtaattacaagtgtcggtgtcagacacaacacgtgtccgacaccaggacacg 42893449  T
Q  205 ccttatccaaggagtgtccgtgcttcata 233  Q
    ||| ||   |||||||||| |||||||||    
T  42893450 cctaatatgaggagtgtccatgcttcata 42893478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 107 - 233
Target Start/End: Original strand, 31084315 - 31084446
Alignment:
Q  107 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcg-----gtgtcggacacgacacgtgtctgacacggggac 201  Q
    ||||||| |||||||||||   ||| | ||||||||| ||| || |||||||| | ||||||     ||||||||||||||||||||| ||||| |||||    
T  31084315 gacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcgtgtcggacacgacacgtgtccgacactgggac 31084414  T
Q  202 acgccttatccaaggagtgtccgtgcttcata 233  Q
    | |||| |||| ||||||||||||| ||||||    
T  31084415 atgcctaatccgaggagtgtccgtggttcata 31084446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 232
Target Start/End: Complemental strand, 18421882 - 18421779
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggg----gacacgccttatccaaggagtgtccgtgct 228  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||||||| |||| | ||| ||    |||||| || |||| ||||||||| |||||    
T  18421882 agaaaatcacataatccagtgtaattatatgtgtcggcgtcggacacgacacatgtccggcaccgggactgacacgtctaatccgaggagtgtctgtgct 18421783  T
Q  229 tcat 232  Q
    ||||    
T  18421782 tcat 18421779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 39698600 - 39698670
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||||||| || || ||||| | ||||||||| |||| ||||||||||||||||||||    
T  39698600 gtgtcggtgtcggacacgacatgtatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcata 39698670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 133 - 233
Target Start/End: Original strand, 14873535 - 14873640
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtc-----ggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgc 227  Q
    |||||| |||| |||  ||||||||||||||||||||||||     |||| | |||||||||  |||| ||||||||||| |||| ||||||||||||||    
T  14873535 agaaaagcacataatttagtgtaattatatgtgtcggtgtcatgtcggacgcaacacgtgtccaacaccgggacacgcctaatccgaggagtgtccgtgc 14873634  T
Q  228 ttcata 233  Q
    ||||||    
T  14873635 ttcata 14873640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 232
Target Start/End: Complemental strand, 23016030 - 23015926
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcg-----gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgc 227  Q
    ||||||||||| ||| ||||||||||||| ||||||     || |||||||||||| ||||| ||||  ||||||||||| |||| ||||||||||| ||    
T  23016030 agaaaatcacataattcagtgtaattataggtgtcgatgttgtatcggacacgacatgtgtccgacattgggacacgcctaatccgaggagtgtccgagc 23015931  T
Q  228 ttcat 232  Q
    |||||    
T  23015930 ttcat 23015926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 232
Target Start/End: Original strand, 43001859 - 43001922
Alignment:
Q  169 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    |||||||||||||||||||||  ||||  |||||||||| |||| |||||||||||||||||||    
T  43001859 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 43001922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 23012430 - 23012380
Alignment:
Q  152 tgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggaca 202  Q
    ||||||||||||||||||||| ||||||||||| |||||||||| ||||||    
T  23012430 tgtaattatatgtgtcggtgttggacacgacacatgtctgacaccgggaca 23012380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 138 - 230
Target Start/End: Original strand, 4105282 - 4105374
Alignment:
Q  138 atcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttc 230  Q
    |||||| ||| ||||||||||| | |||| ||| || ||| ||| | |||||||| || ||||||||||| |||| |||||||||||||||||    
T  4105282 atcacataattcagtgtaattacaagtgtaggtatcagactcgatatgtgtctgatactgggacacgcctaatccgaggagtgtccgtgcttc 4105374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 18592132 - 18592200
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 231  Q
    ||||||||||||||||| ||||||||||||||  |||||||| || || | | ||||||||||||||||    
T  18592132 gtgtcggtgtcggacacaacacgtgtctgacatcgggacacggctaattcgatgagtgtccgtgcttca 18592200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 233
Target Start/End: Original strand, 27932253 - 27932353
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||| ||| ||| ||||||||||| |  | | |||||||||||||||||||||| |||||  |||||||||| || | ||||||||  |||||||||    
T  27932253 agaaaattacataattcagtgtaattacaaatcttggtgtcggacacgacacgtgtcggacaccaggacacgcctaattcgaggagtgtttgtgcttcat 27932352  T
Q  233 a 233  Q
    |    
T  27932353 a 27932353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 30098391 - 30098455
Alignment:
Q  169 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||||||| |||||  |||||| ||| |||| |||| |||||||||||||||    
T  30098391 gtgtcggacacgacacgtgtcagacaccaggacacacctaatccgaggaatgtccgtgcttcata 30098455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 222
Target Start/End: Original strand, 15382533 - 15382592
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtc 222  Q
    |||||||||| ||||||||||| |||| ||||| ||||||||||| |||| |||||||||    
T  15382533 gtgtcggtgttggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtc 15382592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 7677764 - 7677834
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||| |||||| ||| |||| ||||| ||||||||||| |||| ||||| ||| ||||||||||    
T  7677764 gtgtcggtgtctgacacgtcacatgtccgacaccgggacacgcctaatccgaggagagtcggtgcttcata 7677834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 32630802 - 32630676
Alignment:
Q  107 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 206  Q
    ||||||||||||| | |||   ||| ||||||| | | ||| || |||||||||||||||| |||||||| |||||||||||| ||||  | ||||| ||    
T  32630802 gacacgctgacaccgataataatttgagaaaattatataattcaatgtaattatatgtgtcagtgtcggatacgacacgtgtccgacattgagacacacc 32630703  T
Q  207 ttatccaaggagtgtccgtgcttcata 233  Q
    | || | |||||||||  |||||||||    
T  32630702 taattcgaggagtgtctatgcttcata 32630676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 3966521 - 3966562
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  3966521 agaaaatcacacaattcagtgtaattatatgtgtcggtgtcg 3966562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 15884008 - 15884057
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacac 184  Q
    ||||||||| ||| ||||||||||| | ||||||||||||||||||||||    
T  15884008 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacac 15884057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 19579760 - 19579829
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||| |||||||||||||||  ||||| |||| ||||||||||| |||| |||||||| |||| |||||    
T  19579760 gtgtcagtgtcggacacgacatatgtctaacaccgggacacgcctaatccgaggagtgtacgtgtttcat 19579829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 233
Target Start/End: Original strand, 6770523 - 6770654
Alignment:
Q  94 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgac 193  Q
    ||||||||||| | |||| |||||||| ||||   ||| ||||||||||| ||| ||||||| ||||  ||||| |||||||||||||||| ||||        
T  6770523 gacacggacactg-acacactgacacaactaataatttaagaaaatcacataattcagtgtacttat--gtgtcagtgtcggacacgacacatgtc---- 6770615  T
Q  194 acggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
     | || |||||||| |||| | ||||||||||||||||||    
T  6770616 -ctggtacacgcctaatccgaagagtgtccgtgcttcata 6770654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 16203836 - 16203785
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacac 184  Q
    |||||||| || |||  ||||||||||||||||||||||||||||| |||||    
T  16203836 agaaaatctcataatttagtgtaattatatgtgtcggtgtcggacaagacac 16203785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 162 - 233
Target Start/End: Complemental strand, 16304438 - 16304367
Alignment:
Q  162 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||| || |||||||||||||||| | ||||| | |||||| || |||| |||| |||||||||||||||    
T  16304438 tgtgtcagtatcggacacgacacgtgcccgacaccgagacacgtctaatccgaggaatgtccgtgcttcata 16304367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 34879340 - 34879415
Alignment:
Q  105 cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 180  Q
    ||||||||| | ||| ||||||  ||| ||||||||| | ||| ||||||||| |||||||||| |||||||||||    
T  34879340 cggacacgccggcaccgctaaaaatttgagaaaatcatataattcagtgtaataatatgtgtcgatgtcggacacg 34879415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 174
Target Start/End: Complemental strand, 37328883 - 37328844
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    ||||||||||||| ||||||||||| ||||||||||||||    
T  37328883 aaaatcacaaaattcagtgtaattacatgtgtcggtgtcg 37328844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 41995534 - 41995581
Alignment:
Q  185 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||| |||||| |||||||||| |||| |||||||||||||||||||    
T  41995534 gtgtcggacacgaggacacgcctaatcctaggagtgtccgtgcttcat 41995581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 3966562 - 3966632
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||| ||||||||||| ||| |||||  |||  |||||||| || |||| ||||||||||||||||||||    
T  3966562 gtgtcagtgtcggacacaacatgtgtccaacagagggacacgtctaatccgaggagtgtccgtgcttcata 3966632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 185
Target Start/End: Original strand, 6247642 - 6247692
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacg 185  Q
    ||||||||| ||| ||||||||||| | |||||||||||||||||| ||||    
T  6247642 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacggcacg 6247692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 112
Target Start/End: Original strand, 15382423 - 15382457
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacacg 112  Q
    ||||||||| |||||||||||||||||||||||||    
T  15382423 atgaagcacggatacggacacggacaccggacacg 15382457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 23290049 - 23289999
Alignment:
Q  183 acgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||| |||||||| || ||||||| | |||||||||||||||    
T  23290049 acgtgtctgacaccgggacacgtctaatccaagcaatgtccgtgcttcata 23289999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 24238661 - 24238603
Alignment:
Q  174 ggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||||||||||  |||| |||||| || | |||| |||||||||||||||||||    
T  24238661 ggacacgacacgtgtccaacactgggacatgcataatcctaggagtgtccgtgcttcat 24238603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 32766943 - 32766873
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||| | |||||||||||| |||||  ||| ||| || |||  ||||||||||||||||||||    
T  32766943 gtgtcggtgtcgaaaacgacacgtgtccgacaccaggatacgtctaatctgaggagtgtccgtgcttcata 32766873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 230
Target Start/End: Complemental strand, 36642757 - 36642696
Alignment:
Q  168 ggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttc 230  Q
    |||||||||||||||||||||| ||||| ||||||||||| ||   ||||||||| |||||||    
T  36642757 ggtgtcggacacgacacgtgtccgacac-gggacacgcctaattggaggagtgtcggtgcttc 36642696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 6471930 - 6471889
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    ||||||||||| ||| |||||||||||||||||| |||||||    
T  6471930 agaaaatcacataattcagtgtaattatatgtgtgggtgtcg 6471889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 19820389 - 19820329
Alignment:
Q  170 tgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||||   |||| ||||| ||||||||||| |||  ||||||||||||||||||||    
T  19820389 tgtcggacacgac---tgtccgacaccgggacacgcctaatcagaggagtgtccgtgcttcata 19820329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 41091298 - 41091257
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    ||||||||||| ||| |||||||||||||||||||| |||||    
T  41091298 agaaaatcacataattcagtgtaattatatgtgtcgatgtcg 41091257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 17088358 - 17088402
Alignment:
Q  182 cacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 226  Q
    |||||||| ||||| ||||||||||| |||| |||||||||||||    
T  17088358 cacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtg 17088402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 233
Target Start/End: Original strand, 35017125 - 35017161
Alignment:
Q  197 gggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  35017125 gggacacgcctaatccgaggagtgtccgtgcttcata 35017161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 40000558 - 40000494
Alignment:
Q  169 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||| || ||||| ||| ||||||| | |||||| ||||||  ||||||||||||||||||||    
T  40000558 gtgtcgtacgcgacatgtgcctgacaccgagacacgtcttatctgaggagtgtccgtgcttcata 40000494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 2e-40; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 94 - 233
Target Start/End: Complemental strand, 5414251 - 5414102
Alignment:
Q  94 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatat-----------gtgtcggtgtcggacacgac 182  Q
    ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||           ||||| ||||||||||||||    
T  5414251 gacacggacac-ggacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtatcggtgtcgtgtcagtgtcggacacgac 5414153  T
Q  183 acgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  5414152 acgtgtctgacacagggacacaccttatccaaggagtgtccgtgcttcata 5414102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 23293053 - 23292927
Alignment:
Q  107 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 206  Q
    ||||||| |||||||||||   ||| | ||||||||| ||| |||| |||||| | ||||||||||||||||||||||||||| ||||| ||||||||||    
T  23293053 gacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcc 23292954  T
Q  207 ttatccaaggagtgtccgtgcttcata 233  Q
    | |||| ||||||||||||||||||||    
T  23292953 taatccgaggagtgtccgtgcttcata 23292927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 127 - 233
Target Start/End: Complemental strand, 19097941 - 19097836
Alignment:
Q  127 ttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 226  Q
    ||||||||||||||||  ||| |||| ||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| |||| ||||||| |||    
T  19097941 ttttttagaaaatcacgtaattcagtataattatatttgtcggtgtcgaacatgacacgtgtctgacacggggacacgcctta-ccaaagagtgtctgtg 19097843  T
Q  227 cttcata 233  Q
    |||||||    
T  19097842 cttcata 19097836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 49431017 - 49431140
Alignment:
Q  107 gacacgctgacacagctaa-attttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgc 205  Q
    ||||||| ||||||||||| | |||  | ||||||||| ||| ||||||||||| | |||||||||||||||||||||||||||  |||| |||||||||    
T  49431017 gacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcggtgtcggacacgacacgtgtccaacaccgggacacgc 49431116  T
Q  206 cttatccaaggagtgtccgtgctt 229  Q
    ||||||| |||||||||| |||||    
T  49431117 cttatccgaggagtgtccatgctt 49431140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 30982878 - 30982807
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatat 234  Q
    ||||||||||| ||||||||||||||| ||||| ||||||||||| |||||| |||||||||||||||||||    
T  30982878 gtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgcttcatat 30982807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 135 - 233
Target Start/End: Complemental strand, 28964287 - 28964189
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||| ||| ||||||||||| | ||||| |||||||||||||||| | || ||||| ||||||||||| |||| |||||||||| |||||||||    
T  28964287 aaaatcacataattcagtgtaattacaagtgtctgtgtcggacacgacacatatccgacactgggacacgcctaatccgaggagtgtccatgcttcata 28964189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 133 - 233
Target Start/End: Complemental strand, 8423759 - 8423659
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||||| ||| |||||||||||||  ||||||||||||||||||||  |||| ||||| ||||||||||| |||  || ||||||||||| ||||    
T  8423759 agaaaatcacataattcagtgtaattataaatgtcggtgtcggacacgacagctgtccgacaccgggacacgcctaatcggagaagtgtccgtgcgtcat 8423660  T
Q  233 a 233  Q
    |    
T  8423659 a 8423659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 233
Target Start/End: Complemental strand, 46084050 - 46083921
Alignment:
Q  115 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-----------gacacgacacgtgtctgacacggggacac 203  Q
    ||||||||||| | |||||| |||||||| |||  |||||||||||||||||||||||||           ||||||||||||||||||| |||||||||    
T  46084050 gacacagctaattgttttagtaaatcacataatctagtgtaattatatgtgtcggtgtcgtgtcagtatcggacacgacacgtgtctgacgcggggacac 46083951  T
Q  204 gccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||   |||||||||| |||||||||    
T  46083950 gccttataagaggagtgtccatgcttcata 46083921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 12323968 - 12324038
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||||||| ||||||||| || |||||| |||| |||||||| ||||||||||||||||||||    
T  12323968 gtgtcggtgtcggacatgacacgtgtgtggcacgggaacacaccttatccgaggagtgtccgtgcttcata 12324038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 12895297 - 12895215
Alignment:
Q  151 gtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||| ||||||||||||||||||||| || || ||||  ||||||||||| |||| |||||||| |||||||||||    
T  12895297 gtgtaattataagtgtcggtgtcggacacgacatgtatccgacatcgggacacgcctaatccgaggagtgttcgtgcttcata 12895215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 135 - 233
Target Start/End: Complemental strand, 34306843 - 34306745
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||| | |||| |||||||||| | ||||||||||||||||||||||||||| ||||| | ||||||||| |||  |||| ||| |||||||||||    
T  34306843 aaaatcagataatgtagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcata 34306745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 233
Target Start/End: Complemental strand, 715646 - 715546
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtc--ggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||| ||| ||||||||||| | |||| ||||||  | ||||||||| |||| ||||| ||||||||||| |||| |||||||||||||||||||    
T  715646 aaaatcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 715547  T
Q  233 a 233  Q
    |    
T  715546 a 715546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 233
Target Start/End: Complemental strand, 752972 - 752872
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtc--ggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||| ||| ||||||||||| | |||| ||||||  | ||||||||| |||| ||||| ||||||||||| |||| |||||||||||||||||||    
T  752972 aaaatcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 752873  T
Q  233 a 233  Q
    |    
T  752872 a 752872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 24613700 - 24613631
Alignment:
Q  164 tgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||| |||||||||||||||||||||  ||||||| || |||| ||||||||||||||||||||    
T  24613700 tgtcggtgtcagacacgacacgtgtctgacaccaggacacgtctaatcctaggagtgtccgtgcttcata 24613631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 233
Target Start/End: Original strand, 35161054 - 35161154
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||||| ||| ||||||||||||| || || | ||||||||||||||||||| ||||| || |||| ||| |||| |  ||||||||||||||||    
T  35161054 agaaaatcacataattcagtgtaattataagtatcagagtcggacacgacacgtgtccgacaccggaacacacctaatccgaaaagtgtccgtgcttcat 35161153  T
Q  233 a 233  Q
    |    
T  35161154 a 35161154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 150 - 233
Target Start/End: Complemental strand, 2361999 - 2361916
Alignment:
Q  150 agtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||| | |||||||||||||||||||| |||||||||||| | ||||| ||| |||  | ||||||||||||||||||    
T  2361999 agtgtaattaaaagtgtcggtgtcggacacgactcgtgtctgacaccgagacacacctaatctgacgagtgtccgtgcttcata 2361916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 135 - 230
Target Start/End: Complemental strand, 12797377 - 12797282
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttc 230  Q
    ||||||||| ||| ||||||||||| | ||||||||||||||||||| || |||||||||| |||||| | || |||| |||| ||| ||||||||    
T  12797377 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgatacatgtctgacaccgggacaagtctaatccgaggaatgttcgtgcttc 12797282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 54580087 - 54580008
Alignment:
Q  110 acgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtc 189  Q
    ||||||||||| ||||   ||| | ||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||    
T  54580087 acgctgacacaactaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcggacacgacacgtgtc 54580008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 16073414 - 16073512
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||| || ||| ||||||||||| | ||||||||||||||||||| || |||| |||||   ||||||||| |||| |||||||||| |||||||||    
T  16073414 aaaatcgcataattcagtgtaattacaagtgtcggtgtcggacacgatacatgtccgacactaagacacgcctaatccgaggagtgtccatgcttcata 16073512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 233
Target Start/End: Complemental strand, 35158024 - 35157926
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||| |||  |||||||||||| ||||||||||| |||||||||| ||||  |||| || |||||| | |||| || |||||||||||||||||    
T  35158024 aaaatcacataatttagtgtaattataagtgtcggtgtctgacacgacacatgtccaacaccggaacacgcttaatccgagaagtgtccgtgcttcata 35157926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 233
Target Start/End: Original strand, 36635342 - 36635448
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgt-cg-----gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 226  Q
    ||||||||||| ||| |||||||||||||||||| ||     ||||| ||||||||||| ||| ||||| ||||||||||| |||| | |||||||||||    
T  36635342 agaaaatcacataattcagtgtaattatatgtgttcgtgtgagtgtcagacacgacacgcgtcagacaccgggacacgcctaatccgaagagtgtccgtg 36635441  T
Q  227 cttcata 233  Q
    |||||||    
T  36635442 cttcata 36635448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 3947766 - 3947702
Alignment:
Q  169 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||||||| |||||  |||||| ||| |||| ||||||||||||||||||||    
T  3947766 gtgtcggacacgacacgtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttcata 3947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 168 - 234
Target Start/End: Original strand, 848015 - 848081
Alignment:
Q  168 ggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatat 234  Q
    |||||||||||||| |||||||  |||| ||||||| ||| |||||||||||||||||| |||||||    
T  848015 ggtgtcggacacgaaacgtgtcgaacaccgggacacacctaatccaaggagtgtccgtgtttcatat 848081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 19482727 - 19482797
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||| | |||||||||||||||| ||||| ||||||| ||| |||| |||||||| |||||||||||    
T  19482727 gtgtcggtattggacacgacacgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcata 19482797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 19500858 - 19500788
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||||||||||||||  ||||| || | | ||||||| ||||||||||| |||||||||||||    
T  19500858 gtgtcggtgtcggacacgacacgcctctgataccgaggcacgcctaatccaaggagtatccgtgcttcata 19500788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 204
Target Start/End: Original strand, 29205464 - 29205533
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacg 204  Q
    ||||||||| ||| ||||||||||| | |||||||||| ||||||||||| |||| ||||| ||||||||    
T  29205464 aaaatcacataattcagtgtaattacaagtgtcggtgttggacacgacacatgtccgacaccgggacacg 29205533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 192
Target Start/End: Complemental strand, 36509131 - 36509074
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctga 192  Q
    ||||||||| |||  |||||||||||||||||||| ||||||| ||||||||||||||    
T  36509131 aaaatcacataatcaagtgtaattatatgtgtcggcgtcggacgcgacacgtgtctga 36509074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 40179675 - 40179626
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacac 184  Q
    ||||||||| ||| ||||||||||||||| ||||||||||||||||||||    
T  40179675 aaaatcacataattcagtgtaattatatgcgtcggtgtcggacacgacac 40179626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 20950458 - 20950362
Alignment:
Q  143 aaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatattttca 239  Q
    ||||| ||||||||||||||||||||||||| ||||||| || |||   |||| |  |||||| | |||||||||||| |||| |||||||| ||||    
T  20950458 aaaattcagtgtaattatatgtgtcggtgtcagacacgatacatgttcaacacagaaacacgcataatccaaggagtgcccgtacttcatatattca 20950362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 233
Target Start/End: Complemental strand, 4672125 - 4672026
Alignment:
Q  134 gaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||| ||| ||| |||||||  ||||||||||||||||||| || | ||||||  ||||| || ||| | || |||||||||||||| ||||||||||    
T  4672125 gaaaattacataattcagtgtagctatatgtgtcggtgtcggatacaaaacgtgttcgacactggaacatgtctaatccaaggagtgtctgtgcttcata 4672026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 222
Target Start/End: Original strand, 21945503 - 21945610
Alignment:
Q  115 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaa 214  Q
    |||||||||||   ||| | ||||| ||| ||| ||||||||||| | |||||||||||||||| ||||| |||| ||||| |  |||||||| |||| |    
T  21945503 gacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggacatgacacatgtccgacaccgcaacacgcctaatccga 21945602  T
Q  215 ggagtgtc 222  Q
    ||||||||    
T  21945603 ggagtgtc 21945610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 28084589 - 28084640
Alignment:
Q  180 gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 231  Q
    |||||||||| ||||| ||||||||||| |||| ||||||||||||||||||    
T  28084589 gacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 233
Target Start/End: Original strand, 29205527 - 29205586
Alignment:
Q  174 ggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||| |||| ||||| ||||||||||| |||| |||||||| |||||||||||    
T  29205527 ggacacgacacatgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcata 29205586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 53381602 - 53381531
Alignment:
Q  163 gtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||| ||| ||| || ||||| ||||||| ||| |||| ||||||||||||||||||||    
T  53381602 gtgtcggtgtcggacactgacgcgtatccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 53381531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 233
Target Start/End: Complemental strand, 32273524 - 32273462
Alignment:
Q  171 gtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||||||| || || ||||||||||| |  |||||||||||||| ||||||||||    
T  32273524 gtcggacacgacacgtatccgatacggggacacgacaaatccaaggagtgtcggtgcttcata 32273462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 40613442 - 40613504
Alignment:
Q  107 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcgg 169  Q
    ||||||| ||||| |||||  |||| ||||||||||| ||| |||||||||||||||||||||    
T  40613442 gacacgccgacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtgtcgg 40613504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 42640549 - 42640642
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||| ||| ||||||||||| | ||||||||||||||||||     |||| | |||  |||||||||| |||| |||||| |||||||||||||    
T  42640549 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg-----tgtccggcaccaggacacgcctaatccgaggagtttccgtgcttcata 42640642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 4157169 - 4157266
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||| |||  |||| ||||| | |||||||||||||||||||||| |||| ||||| | || || ||| || | ||||||||| |||||||||    
T  4157169 aaaatcacataatttagtgcaattacaagtgtcggtgtcggacacgacacatgtccgacaccgagaaacacctaattcgaggagtgtctgtgcttcat 4157266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 4157456 - 4157553
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||| |||  |||| ||||| | |||||||||||||||||||||| |||| ||||| | || |||||| || | |||||||||  ||||||||    
T  4157456 aaaatcacataatttagtgcaattacaagtgtcggtgtcggacacgacacatgtccgacaccgagaaacgcctaattcgaggagtgtctatgcttcat 4157553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 14465070 - 14465005
Alignment:
Q  169 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatat 234  Q
    ||||| ||||||||||||||  ||||| |||||||| || |||  |||||||||||||||||||||    
T  14465070 gtgtcagacacgacacgtgttcgacactgggacacgtctaatctgaggagtgtccgtgcttcatat 14465005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 78 - 174
Target Start/End: Original strand, 30298910 - 30299006
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacacgctgacacagctaa-attttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    ||||||||| |||||||||||||||| | ||||||| ||||||||||| | |||  | ||||| ||| ||| ||||||||||| | ||||||||||||    
T  30298910 atgaagcacagatacggacacggaca-ctgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcg 30299006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 78 - 174
Target Start/End: Original strand, 30327778 - 30327874
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacacgctgacacagctaa-attttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    ||||||||| |||||||||||||||| | ||||||| ||||||||||| | |||  | ||||| ||| ||| ||||||||||| | ||||||||||||    
T  30327778 atgaagcacagatacggacacggaca-ctgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcg 30327874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 174
Target Start/End: Original strand, 13783261 - 13783340
Alignment:
Q  94 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    ||||||||||| | |||| | ||||| ||||| | ||| |||| |||||||||| ||||||||||||||||| ||||||||    
T  13783261 gacacggacactg-acacaccgacaccgctaattatttgagaagatcacaaaattcagtgtaattatatgtgccggtgtcg 13783340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 18966567 - 18966627
Alignment:
Q  173 cggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||| ||||||||| ||||  |||| |||||| ||| |||||||||||||||||||||    
T  18966567 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtccgtgcttcata 18966627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 237
Target Start/End: Original strand, 4383449 - 4383488
Alignment:
Q  198 ggacacgccttatccaaggagtgtccgtgcttcatatttt 237  Q
    |||||||||| |||| ||||||||||||||||||||||||    
T  4383449 ggacacgcctaatccgaggagtgtccgtgcttcatatttt 4383488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 10499311 - 10499260
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacac 184  Q
    ||||||||||| |||  |||||||||||||||||| ||||||||| ||||||    
T  10499311 agaaaatcacataatttagtgtaattatatgtgtcagtgtcggacccgacac 10499260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 16189710 - 16189773
Alignment:
Q  116 acacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac 179  Q
    |||| ||||||  ||| ||||||||||| ||| |||||||||||| |||||||||| |||||||    
T  16189710 acaccgctaaaaatttgagaaaatcacataattcagtgtaattatgtgtgtcggtgacggacac 16189773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 23861445 - 23861370
Alignment:
Q  158 tatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||||||| || ||||||| |||||| |||   ||||||||| || ||| |||||| |||||||||||    
T  23861445 tatatgtgtcggtgtcagatacgacacatgtctgtcaccaagacacgcctaattcaaagagtgttcgtgcttcata 23861370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 24343560 - 24343631
Alignment:
Q  163 gtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||| ||||| ||| |||||| ||||| |||||||||||  ||  ||||||||||||||||||||    
T  24343560 gtgtcggtgtccgacaccgacgcgtgtccgacaccgggacacgcctattctgaggagtgtccgtgcttcata 24343631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 174
Target Start/End: Complemental strand, 44132691 - 44132644
Alignment:
Q  127 ttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    ||||||||||||||||  ||| |||| |||||||||||||||||||||    
T  44132691 ttttttagaaaatcacgtaattcagtataattatatgtgtcggtgtcg 44132644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 8402783 - 8402721
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacac 195  Q
    ||||||||| | ||| |||||||||||||||| || ||||| |||||||||| |||| |||||    
T  8402783 agaaaatcatataattcagtgtaattatatgtctcagtgtcagacacgacacttgtccgacac 8402721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 9996858 - 9996920
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacac 195  Q
    ||||||||||| ||| |||| ||||||||||| |||||||| ||||  ||||||||| |||||    
T  9996858 agaaaatcacataattcagtataattatatgtctcggtgtcagacataacacgtgtccgacac 9996920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 22234890 - 22234820
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||| ||||||||||||||| |||||  ||||||  || |||| || ||||| |||||||||||    
T  22234890 gtgtcggtgtctgacacgacacgtgtccgacaccaggacacagctaatccgagaagtgttcgtgcttcata 22234820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 112
Target Start/End: Complemental strand, 23293099 - 23293065
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacacg 112  Q
    ||||||||| |||||||||||||||||||||||||    
T  23293099 atgaagcacagatacggacacggacaccggacacg 23293065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 30838269 - 30838335
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 229  Q
    ||||| ||||||||| ||||||||||| |||||   ||||||||| | || ||||||||||||||||    
T  30838269 gtgtcagtgtcggacgcgacacgtgtccgacaccaagacacgcctaacccgaggagtgtccgtgctt 30838335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 3064926 - 3064869
Alignment:
Q  176 acacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||| |||| ||| | | ||||||||| |||| ||||||||||||||||||||    
T  3064926 acacgacacatgtccgactctgagacacgcctaatccgaggagtgtccgtgcttcata 3064869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 180
Target Start/End: Complemental strand, 6879532 - 6879459
Alignment:
Q  107 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 180  Q
    ||||||| |||| ||| ||||||||   ||||||||| |||  |||||||||| | ||||||||||||||||||    
T  6879532 gacacgccgacatagcaaaatttttggaaaaatcacataattaagtgtaattacaagtgtcggtgtcggacacg 6879459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 174
Target Start/End: Complemental strand, 12895210 - 12895116
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    ||||||||| |||||||||||||||||  ||||||| || ||||||||   ||| | ||||||||| ||| ||  ||||||| | ||||||||||||    
T  12895210 atgaagcacagatacggacacggacac--gacacgccgaaacagctaataatttgaaaaaatcacataattcaaagtaattacaagtgtcggtgtcg 12895116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 22440608 - 22440559
Alignment:
Q  183 acgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||| |||||  |||||||||| |||| |||||||||||||||||||    
T  22440608 acgtgtccgacactaggacacgcctaatccgaggagtgtccgtgcttcat 22440559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 42014965 - 42015022
Alignment:
Q  122 ctaaattttttagaaaatcaca-aaatgcagtgtaattatatgtgtcggtgtcggaca 178  Q
    ||||| |||| ||| ||||||| |||| |||||||||||||||||| |||||||||||    
T  42014965 ctaaaattttgagataatcacataaattcagtgtaattatatgtgttggtgtcggaca 42015022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 5775341 - 5775305
Alignment:
Q  197 gggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  5775341 gggacacgcctaatccgaggagtgtccgtgcttcata 5775305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 5775399 - 5775359
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtc 173  Q
    ||||||||||| |||  ||||||||||||||||||||||||    
T  5775399 agaaaatcacataattaagtgtaattatatgtgtcggtgtc 5775359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 195
Target Start/End: Original strand, 13307885 - 13307957
Alignment:
Q  123 taaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacac 195  Q
    |||| |||| ||||||| ||| ||| || |||||| | | |||| |||||||||||||||||||||| |||||    
T  13307885 taaaattttgagaaaatgacataattcaatgtaatcacaagtgttggtgtcggacacgacacgtgtcagacac 13307957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 174
Target Start/End: Complemental strand, 22234973 - 22234890
Alignment:
Q  91 acggacacggacaccggacacgctgacacagctaaattttttagaaaa-tcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    ||||| |||||||| |||||||| ||||| ||||||  ||| | |||| ||||| ||| |||||||||| |||||||||||||||    
T  22234973 acggatacggacac-ggacacgccgacaccgctaaaaatttgaaaaaaatcacataattcagtgtaattctatgtgtcggtgtcg 22234890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 233
Target Start/End: Complemental strand, 30103397 - 30103298
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||||| |||  |||||||| |||||||||||||||  ||||||||  |||||||||   ||||||  || |||| |||||||||  ||||||||    
T  30103397 agaaaatcacataatt-agtgtaatcatatgtgtcggtgtcaaacacgacatatgtctgacatcaggacacatctaatccgaggagtgtctctgcttcat 30103299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 7e-40; HSPs: 67)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 107 - 233
Target Start/End: Original strand, 18367828 - 18367965
Alignment:
Q  107 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgt-----------cggtgtcggacacgacacgtgtctgacac 195  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||           ||||||| |||||||||| ||||||||||    
T  18367828 gacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcagacacgacacatgtctgacac 18367927  T
Q  196 ggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18367928 ggggacacgccttatccaaggagtgtccgtgcttcata 18367965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 106 - 233
Target Start/End: Complemental strand, 16488658 - 16488520
Alignment:
Q  106 ggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggt-----------gtcggacacgacacgtgtctgaca 194  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||| ||    
T  16488658 ggacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtctggca 16488559  T
Q  195 cggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  16488558 cggggacacgccttatccaaggaatgttcgtgcttcata 16488520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 94 - 233
Target Start/End: Original strand, 13789134 - 13789272
Alignment:
Q  94 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgac 193  Q
    |||||||||| || |||||  ||||||||||||||||| | ||||||| |||||||||||||||||||||| ||  ||||||||| ||||||||||||||    
T  13789134 gacacggacatcg-acacgtcgacacagctaaatttttaaaaaaatcataaaatgcagtgtaattatatgtatcaatgtcggacatgacacgtgtctgac 13789232  T
Q  194 acggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    | ||||| ||||||||| |||||||||| |||||||||||    
T  13789233 atggggatacgccttattcaaggagtgttcgtgcttcata 13789272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 94 - 233
Target Start/End: Original strand, 13797753 - 13797891
Alignment:
Q  94 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgac 193  Q
    |||||||||| || |||||  ||||||||||||||||| | ||||||| |||||||||||||||||||||| ||  ||||||||| ||||||||||||||    
T  13797753 gacacggacatcg-acacgtcgacacagctaaatttttaaaaaaatcataaaatgcagtgtaattatatgtatcaatgtcggacatgacacgtgtctgac 13797851  T
Q  194 acggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    | ||||| ||||||||| |||||||||| |||||||||||    
T  13797852 atggggatacgccttattcaaggagtgttcgtgcttcata 13797891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 78 - 233
Target Start/End: Complemental strand, 17841684 - 17841530
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 177  Q
    ||||||||||||||||||||||||||| | |||||| |||||||||||   ||| | ||||||||| |||  |||||||||| | ||| |||||||||||    
T  17841684 atgaagcactgatacggacacggacactg-acacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgacggtgtcggac 17841586  T
Q  178 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||| ||||| ||||| | ||||||||| |||| ||||||||||||||||||||    
T  17841585 acgacatgtgtccgacactgagacacgcctaatccgaggagtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 34595154 - 34595252
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||| ||| ||||||||||| | ||||||||||||||||||||||||||||||||| ||||||| ||| |||| ||||||||||||||||||||    
T  34595154 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcata 34595252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 94 - 234
Target Start/End: Original strand, 9658859 - 9658999
Alignment:
Q  94 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgac 193  Q
    ||||||||||| | |||||| ||||| |||||   ||| ||||||||||| ||| |||||||||||||| |||||||||  |||||||||||||||||||    
T  9658859 gacacggacactg-acacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcggtgttagacacgacacgtgtctgac 9658957  T
Q  194 acggggacacgcctta-tccaaggagtgtccgtgcttcatat 234  Q
    || || |||||||| | |||||||||||||||||||||||||    
T  9658958 accggaacacgcctaattccaaggagtgtccgtgcttcatat 9658999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 78 - 233
Target Start/End: Original strand, 28152063 - 28152216
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 177  Q
    ||||||||| |||| |||||||||||| | |||||| |||| ||||||   ||| | ||||||||| ||| ||||||||||| | |||||||||||||||    
T  28152063 atgaagcacggatatggacacggacactg-acacgccgacaaagctaataatttga-aaaatcacataattcagtgtaattacaagtgtcggtgtcggac 28152160  T
Q  178 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||| ||||| |||||| |||| |||| |||||||| |||||||||||    
T  28152161 acgacacgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcata 28152216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 110 - 233
Target Start/End: Complemental strand, 17327719 - 17327591
Alignment:
Q  110 acgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtc-----ggtgtcggacacgacacgtgtctgacacggggacacg 204  Q
    |||| |||||| ||||  |||| ||||||||||| |||  ||||||| ||||||||||      ||||||||||||||||||||||||||| ||||||||    
T  17327719 acgccgacacaactaagattttgagaaaatcacataatttagtgtaactatatgtgtcagtgtcgtgtcggacacgacacgtgtctgacacagggacacg 17327620  T
Q  205 ccttatccaaggagtgtccgtgcttcata 233  Q
    ||| |||| ||||||||||||||||||||    
T  17327619 cctaatccgaggagtgtccgtgcttcata 17327591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 105 - 231
Target Start/End: Complemental strand, 32978969 - 32978842
Alignment:
Q  105 cggacacgctgacacagctaa-attttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacac 203  Q
    ||||||||| ||||||||||| | |||  | |||| |||| |||  |||||||||| | |||||||||||||||||||||| |||| ||||| |||||||    
T  32978969 cggacacgccgacacagctaataatttgaaaaaaaacacataattaagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccgggacac 32978870  T
Q  204 gccttatccaaggagtgtccgtgcttca 231  Q
    | || |||||||||||||||||||||||    
T  32978869 gtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 133 - 231
Target Start/End: Complemental strand, 7996419 - 7996325
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 231  Q
    ||||||||| | ||| ||||||||||||||| ||||||||||    |||||||||||| |||||||||||||||| ||||||||||| |||||||||||    
T  7996419 agaaaatcatataattcagtgtaattatatgcgtcggtgtcg----cgacacgtgtctaacacggggacacgcctaatccaaggagtctccgtgcttca 7996325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 133 - 231
Target Start/End: Original strand, 8022382 - 8022476
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 231  Q
    ||||||||| | ||| ||||||||||||||| ||||||||||    |||||||||||| |||||||||||||||| ||||||||||| |||||||||||    
T  8022382 agaaaatcatataattcagtgtaattatatgcgtcggtgtcg----cgacacgtgtctaacacggggacacgcctaatccaaggagtctccgtgcttca 8022476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 169 - 232
Target Start/End: Original strand, 12696383 - 12696446
Alignment:
Q  169 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  12696383 gtgtcggacacgacacgtgtctgacaccgggacacaccttatccaaggagtgtctgtgcttcat 12696446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 82 - 234
Target Start/End: Complemental strand, 5626792 - 5626640
Alignment:
Q  82 agcactgatacggacacggacac----cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 177  Q
    ||||| |||||||||||||||||    | ||||||| |||||| |||| ||||||||||||||||  | | |||||||| ||||||||||||||||||||    
T  5626792 agcacggatacggacacggacacgacactgacacgccgacacaactaatttttttagaaaatcacttagttcagtgtaaatatatgtgtcggtgtcggac 5626693  T
Q  178 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatat 234  Q
    |||||||    |||  | ||| ||| ||||||||| ||||||||  |||||||||||    
T  5626692 acgacac----ctgtaatgggaacatgccttatccgaggagtgtttgtgcttcatat 5626640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 115 - 233
Target Start/End: Original strand, 7377979 - 7378097
Alignment:
Q  115 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaa 214  Q
    ||||| ||||||  ||| ||||||||||| ||| || |||||||||||||||||||||||||||||||| |  || ||||| |||||||| || |||  |    
T  7377979 gacaccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggacacgacatgcatccgacaccgggacacggctaatctga 7378078  T
Q  215 ggagtgtccgtgcttcata 233  Q
    | |||||||||||||||||    
T  7378079 gaagtgtccgtgcttcata 7378097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 135 - 233
Target Start/End: Complemental strand, 33001328 - 33001230
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||| |||  | |||||||||||||||||||||||||||||||||||||||||||| |  | |||||| |||||| ||||||  ||||||||||    
T  33001328 aaaatcacataattaaatgtaattatatgtgtcggtgtcggacacgacacgtgtctgacaccgaaatacgcctaatccaaagagtgtttgtgcttcata 33001230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 232
Target Start/End: Complemental strand, 7265634 - 7265535
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| | || |||| ||||| || | | |||| |||| ||||| |||||||||||||    
T  7265634 agaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacaatacatgtccgacaccggaatatgcctaatccgaggagcgtccgtgcttcat 7265535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 8365519 - 8365449
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||| |||||||||||||||||| ||||| ||||||||||| |||| |||||| |||||||||||||    
T  8365519 gtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtctccgtgcttcata 8365449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 10339125 - 10339055
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||||||||||||| |||| ||||| ||||||||||| |||  ||||||||||||||||||||    
T  10339125 gtgtcggtgtcggacacgacacatgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcata 10339055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 28715315 - 28715413
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||| ||| ||| ||||||||||| | ||||||||||||||||||||||||||  ||||| ||||||||||| || | || ||||| |||||||||||    
T  28715315 aaaatgacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgttcgacaccgggacacgcctaattcgagaagtgtacgtgcttcata 28715413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 233
Target Start/End: Complemental strand, 8777052 - 8776909
Alignment:
Q  94 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacg-----tgt 188  Q
    ||||||||||| | |||||| |||||| ||||   ||| | ||||||||||||| ||||||||||| | |||| ||||||||||||||||||     |||    
T  8777052 gacacggacactg-acacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaattacaagtgttggtgtcggacacgacacgacacgtgt 8776954  T
Q  189 ctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    | ||||| | ||||| ||| |||| ||||||||||||||||||||    
T  8776953 ccgacaccgagacacacctaatccgaggagtgtccgtgcttcata 8776909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 233
Target Start/End: Complemental strand, 13360413 - 13360314
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||||| ||| |||||||||||||||| |||||||| ||||| |||  |||| ||||| | ||||||||| |||| | |||||||||||||||||    
T  13360413 agaaaatcacataattcagtgtaattatatgtttcggtgtcagacacaaca-atgtccgacactgagacacgcctaatccgaagagtgtccgtgcttcat 13360315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 31384984 - 31385048
Alignment:
Q  169 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||| ||||||||||||||||  |||| ||||||||||| |||||||||||||||||||||||||    
T  31384984 gtgttggacacgacacgtgtcctacaccgggacacgcctaatccaaggagtgtccgtgcttcata 31385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 233
Target Start/End: Complemental strand, 32511707 - 32511607
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||||| ||| ||||||||||||| |||| ||||||||| ||||||  |||||||||  ||  ||||||| |||  |||||||||||||||||||    
T  32511707 agaaaatcacataattcagtgtaattataagtgttggtgtcggatacgacatatgtctgacatcggagcacgcctaatcggaggagtgtccgtgcttcat 32511608  T
Q  233 a 233  Q
    |    
T  32511607 a 32511607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 154 - 233
Target Start/End: Original strand, 4877982 - 4878060
Alignment:
Q  154 taattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||| | |||||||||||||||||||||| |||| ||||| || |||||||| |||| ||||||||||||||||||||    
T  4877982 taattacaagtgtcggtgtcggacacgacacatgtccgacacagg-acacgcctaatccgaggagtgtccgtgcttcata 4878060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 16766756 - 16766826
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||| ||||||||| ||||| ||||||||||| |||| | || |||||||||||||||    
T  16766756 gtgtcggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttcata 16766826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 19040344 - 19040421
Alignment:
Q  107 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacac 184  Q
    ||||||| ||||| |||||   ||| ||||||||||| ||| ||||||||||||||||||| ||||||||||||||||    
T  19040344 gacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgtcggacacgacac 19040421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 7740660 - 7740712
Alignment:
Q  134 gaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgt 186  Q
    ||||||||||||||  |||||||||||||||||| ||||||||||||||||||    
T  7740660 gaaaatcacaaaattgagtgtaattatatgtgtcagtgtcggacacgacacgt 7740712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 233
Target Start/End: Complemental strand, 13364746 - 13364646
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||| | ||| ||||||||| |||||||||||||| |||||||| || ||||||||||  ||||||| ||  ||| | ||||||| |||||||||    
T  13364746 agaaaatcatataattcagtgtaatcatatgtgtcggtgttggacacgatacatgtctgacaccaggacacgtctattccgacgagtgtctgtgcttcat 13364647  T
Q  233 a 233  Q
    |    
T  13364646 a 13364646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 191
Target Start/End: Original strand, 30851637 - 30851676
Alignment:
Q  152 tgtaattatatgtgtcggtgtcggacacgacacgtgtctg 191  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  30851637 tgtaattatatgtgtcggtgtcggacacgacacgtgtctg 30851676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 233
Target Start/End: Original strand, 4388088 - 4388198
Alignment:
Q  118 acagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaagga 217  Q
    ||||| || ||||||||||||||||| ||| ||| ||||||||||||||| ||||||     | |  |||||||||||| ||||||||||||||| || |    
T  4388088 acagccaatttttttagaaaatcacataatccagggtaattatatgtgtcagtgtcg----tggc-ggtgtctgacacgaggacacgccttatccgagaa 4388182  T
Q  218 gtgtccgtgcttcata 233  Q
    ||||| ||||||||||    
T  4388183 gtgtctgtgcttcata 4388198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 7977897 - 7977771
Alignment:
Q  107 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 206  Q
    ||||||| |||||||||||   ||| | ||||| ||| ||| ||||||||||| | ||||||||||||||||| |||  |||| ||||  |  |||||||    
T  7977897 gacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcggacacaacatatgtccgacaacgaaacacgcc 7977798  T
Q  207 ttatccaaggagtgtccgtgcttcata 233  Q
    | ||| ||||||||| |||||||||||    
T  7977797 taatctaaggagtgttcgtgcttcata 7977771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 26562679 - 26562748
Alignment:
Q  105 cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    ||||||||| ||||| ||||||  ||| ||||||||||| ||| |||||||||||||||||||| |||||    
T  26562679 cggacacgccgacactgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcg 26562748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 34446618 - 34446689
Alignment:
Q  163 gtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||  |||| ||| ||| |||||||| ||||||| ||| |||||||||||||||||||||||||    
T  34446618 gtgtcggtgtccaacaccgacgcgtatctgacactgggacacacctaatccaaggagtgtccgtgcttcata 34446689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 7248417 - 7248487
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||| |||||| ||| ||||| ||||| |||||||| |  |||| ||||||||||||||||||||    
T  7248417 gtgtcggtgttggacacaacatgtgtccgacaccgggacacgtcaaatccgaggagtgtccgtgcttcata 7248487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 9107370 - 9107300
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||| ||  ||||| ||||| ||||||| ||| |||| ||||||| ||||||||||||    
T  9107370 gtgtcggtgtcggacacaacgtgtgtccgacaccgggacacacctaatccgaggagtgcccgtgcttcata 9107300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 24645501 - 24645599
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||| ||| |||| || ||| | ||||||||||| ||||||||||||||| |||||   |||||| || |||| | ||||||| ||||||||||    
T  24645501 aaaatcacataattcagtatagttacaagtgtcggtgtcagacacgacacgtgtccgacaccaagacacgtctaatccgaagagtgtctgtgcttcata 24645599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 9025535 - 9025494
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  9025535 agaaaatcacataattcagtgtaattatatgtgtcggtgtcg 9025494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 31579266 - 31579212
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtc 189  Q
    ||||||||||| ||| ||||||||||||  |||||||||||||||||||||| ||||    
T  31579266 agaaaatcacataattcagtgtaattat--gtgtcggtgtcggacacgacacatgtc 31579212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 4118444 - 4118412
Alignment:
Q  80 gaagcactgatacggacacggacaccggacacg 112  Q
    |||||||||||||||||||||||||||||||||    
T  4118444 gaagcactgatacggacacggacaccggacacg 4118412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 233
Target Start/End: Original strand, 16833267 - 16833426
Alignment:
Q  78 atgaagcactgatacggacacggacaccg-----gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt 172  Q
    |||||||||||||||||||||| |||| |     ||||||| |||||| ||||   ||| | ||||||||| | | ||||||||||| | ||||||||||    
T  16833267 atgaagcactgatacggacacg-acacagacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcggtgt 16833365  T
Q  173 cggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
      ||||||||||| ||| |||||  |||||| ||  |||| ||||||||| || |||||||    
T  16833366 tagacacgacacgcgtccgacaccaggacacaccgaatccgaggagtgtctgtacttcata 16833426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 222
Target Start/End: Complemental strand, 853898 - 853811
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtc 222  Q
    ||||||||| |||  |||| ||||| | |||||||||||||| |||||| ||||| ||||  | ||||||||| |||||| |||||||    
T  853898 aaaatcacataattaagtgcaattacaagtgtcggtgtcggatacgacatgtgtccgacatagagacacgcctaatccaatgagtgtc 853811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 5732551 - 5732504
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 180  Q
    ||||||||||| | |  |||||||||||||||||||||||||||||||    
T  5732551 agaaaatcacatattttagtgtaattatatgtgtcggtgtcggacacg 5732504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 233
Target Start/End: Complemental strand, 6898305 - 6898222
Alignment:
Q  150 agtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||| | |||||||||||||||||||  ||||||  |||| |  |||||||| |||| | |||||| |||||||||||    
T  6898305 agtgtaattacaagtgtcggtgtcggacacgaagcgtgtccaacaccgaaacacgcctaatccgatgagtgttcgtgcttcata 6898222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 174
Target Start/End: Original strand, 7027262 - 7027301
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    ||||||||| ||| ||||||||||||||||||||||||||    
T  7027262 aaaatcacataattcagtgtaattatatgtgtcggtgtcg 7027301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 233
Target Start/End: Original strand, 10649371 - 10649406
Alignment:
Q  198 ggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||| |||||||||||||||||||||||||    
T  10649371 ggacacgcctaatccaaggagtgtccgtgcttcata 10649406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 112
Target Start/End: Original strand, 7938062 - 7938096
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacacg 112  Q
    ||||||||| |||||||||||||||||||||||||    
T  7938062 atgaagcacggatacggacacggacaccggacacg 7938096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 8714039 - 8714109
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||||||||||||| | || ||||  ||||||||||  |||| |||||||||  |||||||||    
T  8714039 gtgtcggtgtcggacacgacacatttccgacatcgggacacgcccaatccgaggagtgtctttgcttcata 8714109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 8931668 - 8931602
Alignment:
Q  108 acacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    |||||| ||||||||||||  ||| ||||||| ||| ||| |||| ||||||||||||||| |||||    
T  8931668 acacgccgacacagctaaaaatttgagaaaataacataattcagtataattatatgtgtcgatgtcg 8931602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 9107436 - 9107370
Alignment:
Q  108 acacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    |||||| |||||||||||   ||| | ||||||||||||| ||||||||||| | ||||||||||||    
T  9107436 acacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcg 9107370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 175
Target Start/End: Original strand, 9629401 - 9629443
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgg 175  Q
    ||||||||||| ||| || ||||||||||||||||||||||||    
T  9629401 agaaaatcacataattcaatgtaattatatgtgtcggtgtcgg 9629443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 179
Target Start/End: Complemental strand, 21924960 - 21924930
Alignment:
Q  149 cagtgtaattatatgtgtcggtgtcggacac 179  Q
    |||||||||||||||||||||||||||||||    
T  21924960 cagtgtaattatatgtgtcggtgtcggacac 21924930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 31959214 - 31959268
Alignment:
Q  179 cgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||| ||||| ||||| ||||||| ||| |||| ||||||||||||||||||||    
T  31959214 cgacatgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 31959268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 7029850 - 7029891
Alignment:
Q  36 ccccaaaaacaaaaccctatcccccaaactcgtcaatttcac 77  Q
    |||||| ||||||||||||||||| ||||||||||| |||||    
T  7029850 ccccaagaacaaaaccctatccccgaaactcgtcaacttcac 7029891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 231
Target Start/End: Complemental strand, 8389513 - 8389411
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattata-tg---tgtcggtgtcggacacgacac-gtgtctgacacggggacacgccttatccaaggagtgtccgtgc 227  Q
    ||||||||| | ||| ||||||||||||| ||   |||||||||||||| | |||| ||||| ||||| ||||||| ||| |||| ||||||||||||||    
T  8389513 agaaaatcatataattcagtgtaattatagtgtcatgtcggtgtcggac-caacacggtgtccgacaccgggacacacctaatccgaggagtgtccgtgc 8389415  T
Q  228 ttca 231  Q
    ||||    
T  8389414 ttca 8389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 9159574 - 9159533
Alignment:
Q  36 ccccaaaaacaaaaccctatcccccaaactcgtcaatttcac 77  Q
    |||||| ||||||||||||||||| |||||||| ||||||||    
T  9159574 ccccaagaacaaaaccctatcccctaaactcgttaatttcac 9159533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 9170854 - 9170895
Alignment:
Q  36 ccccaaaaacaaaaccctatcccccaaactcgtcaatttcac 77  Q
    |||||| ||||||||||||||||| |||||||| ||||||||    
T  9170854 ccccaagaacaaaaccctatcccctaaactcgttaatttcac 9170895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 9617452 - 9617493
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    ||||||||||| ||| || |||||||||||||||||||||||    
T  9617452 agaaaatcacataattcaatgtaattatatgtgtcggtgtcg 9617493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 29020932 - 29020985
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgt 188  Q
    |||||| || ||| ||||||||||||| ||||  ||||||||||||||||||||    
T  29020932 aaaatcgcataattcagtgtaattataggtgtttgtgtcggacacgacacgtgt 29020985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 1191759 - 1191679
Alignment:
Q  115 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacac 195  Q
    |||||||||||   ||| | ||| ||||||||| ||||||||||| | |||||| ||| ||||||||| |||||| |||||    
T  1191759 gacacagctaataatttgaaaaattcacaaaattcagtgtaattacaagtgtcgatgttggacacgacgcgtgtccgacac 1191679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 1700372 - 1700416
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac 179  Q
    ||||||||| | | ||||||||||||| |||||||||||||||||    
T  1700372 aaaatcacatatttcagtgtaattataagtgtcggtgtcggacac 1700416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 110
Target Start/End: Complemental strand, 5970215 - 5970183
Alignment:
Q  78 atgaagcactgatacggacacggacaccggaca 110  Q
    ||||||||| |||||||||||||||||||||||    
T  5970215 atgaagcacagatacggacacggacaccggaca 5970183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 7938170 - 7938218
Alignment:
Q  185 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||| ||||| | ||||||||| |||| ||||||||||||||||||||    
T  7938170 gtgtccgacaccgagacacgcctgatccgaggagtgtccgtgcttcata 7938218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 174
Target Start/End: Original strand, 9027158 - 9027237
Alignment:
Q  94 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    ||||||||||| | |||||| ||||| |||||   ||| ||| ||||||| ||| | ||||||||||||||||||||||||    
T  9027158 gacacggacactg-acacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcg 9027237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 9522949 - 9523001
Alignment:
Q  162 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaa 214  Q
    |||||||||||||||  ||||||||||| ||||| | ||||||||| ||||||    
T  9522949 tgtgtcggtgtcggatccgacacgtgtccgacaccgagacacgcctaatccaa 9523001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 9629448 - 9629512
Alignment:
Q  169 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||| ||| ||||| ||||| | |||||| || |||| |||||||||| |||||||||    
T  9629448 gtgtcggacacaacatgtgtccgacactgagacacgtctaatccgaggagtgtccatgcttcata 9629512  T

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Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 24138485 - 24138545
Alignment:
Q  169 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 229  Q
    |||| ||||| |||||||||||||||| | |||| |||| |||| | ||||||||||||||    
T  24138485 gtgttggacatgacacgtgtctgacacagagacatgcctaatccgaagagtgtccgtgctt 24138545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 127 - 233
Target Start/End: Complemental strand, 18213080 - 18212974
Alignment:
Q  127 ttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 226  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||| ||||||||| |||    
T  18213080 ttttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcggacacgacccctttctgacacggggacacgccttatccgaggagtgtctgtg 18212981  T
Q  227 cttcata 233  Q
    |||||||    
T  18212980 cttcata 18212974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 39138451 - 39138560
Alignment:
Q  122 ctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgt 221  Q
    |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||| || ||||| ||||||||||||||||||||| | |||| |    
T  39138451 ctaaattttttagaaaatcacataattcagtgtaattatatatgtcggtgtcggacacgatacatgtctaacacggggacacgccttatcccaagagtat 39138550  T
Q  222 ccgtgcttca 231  Q
    | ||||||||    
T  39138551 ctgtgcttca 39138560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 78 - 233
Target Start/End: Original strand, 15680773 - 15680927
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 177  Q
    ||||||||| |||||||||| |||||| | |||||| |||| ||||||   ||  | ||||||||| |||  |||||||||||| |||||||||||||||    
T  15680773 atgaagcacggatacggacatggacactg-acacgccgacatagctaataattaaaaaaaatcacataatttagtgtaattataagtgtcggtgtcggac 15680871  T
Q  178 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||| ||||| | |||||| || || | ||||||||||||||||||||    
T  15680872 acgacacgtgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttcata 15680927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 133 - 233
Target Start/End: Complemental strand, 32287504 - 32287404
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||||| ||| ||||| || ||||||||||||||||||||| |||| ||||| ||||| ||||||| ||| |||| |||||||||||||||||||    
T  32287504 agaaaatcacataattcagtgcaagtatatgtgtcggtgtcggacatgacaagtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcat 32287405  T
Q  233 a 233  Q
    |    
T  32287404 a 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 78 - 233
Target Start/End: Original strand, 9778454 - 9778623
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacacg---------ctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcg 168  Q
    ||||||||| |||||||||||||||||||||||||         ||||||||||| |   ||| | ||||||||| ||| |||| |||||| | ||||||    
T  9778454 atgaagcacggatacggacacggacaccggacacgacacggacactgacacagctgataatttgaaaaaatcacataattcagtataattacaagtgtcg 9778553  T
Q  169 gtgt-----cggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||     ||||||| ||||||||| ||||| ||||||||||| |||||||||||||||||||||||||    
T  9778554 gtgtcgtgtcggacacaacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcata 9778623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 133 - 233
Target Start/End: Original strand, 20549809 - 20549909
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||||  ||| ||||||||||||||||||||||||||||||| |||| |||| ||||  | ||||||||| |||| ||||||| |||||||||||    
T  20549809 agaaaatcacgtaattcagtgtaattatatgtgtcggtgtcggacacaacacatgtccgacaatgagacacgcctaatccgaggagtgcccgtgcttcat 20549908  T
Q  233 a 233  Q
    |    
T  20549909 a 20549909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 133 - 233
Target Start/End: Original strand, 21880170 - 21880270
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||| ||| ||| ||||||||||| | |||||||||||||||||||||| |||| |||||  |||||||||| |||| || ||||||||||||||||    
T  21880170 agaaaattacataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcat 21880269  T
Q  233 a 233  Q
    |    
T  21880270 a 21880270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 5409903 - 5409772
Alignment:
Q  107 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-----gacacgacacgtgtctgacacggggac 201  Q
    |||||||||| ||||||||   ||| | ||||||||| ||| ||||| ||||| | ||||||||||||     ||||||||||||||| ||||| |||||    
T  5409903 gacacgctgatacagctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccgggac 5409804  T
Q  202 acgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||| |||| ||||||||||||||||||||    
T  5409803 acgcctaatccgaggagtgtccgtgcttcata 5409772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 598245 - 598326
Alignment:
Q  152 tgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||| || ||||||||||| ||||||||||||||| ||||| ||||||||||| |||| || |||||||||||||||||    
T  598245 tgtaattgtaagtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcata 598326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 233
Target Start/End: Complemental strand, 43027508 - 43027405
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-----gacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 229  Q
    ||||||||| |||||||||||| || | ||||||||||||     ||||||||||||||| ||||| ||||||||||| |||| | ||||||||||||||    
T  43027508 aaaatcacataatgcagtgtaaatacaagtgtcggtgtcgtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgctt 43027409  T
Q  230 cata 233  Q
    ||||    
T  43027408 cata 43027405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 24339701 - 24339771
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||||||||||||||| || ||||| ||||||||||| |||| ||||||| ||||||||||||    
T  24339701 gtgtcggtgtcggacacgacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttcata 24339771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 150 - 233
Target Start/End: Original strand, 21864843 - 21864926
Alignment:
Q  150 agtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||| | |||||| |||||||||||||||||||| ||||| |||||||| || || | ||||||||| ||||||||||    
T  21864843 agtgtaattacaagtgtcgctgtcggacacgacacgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgcttcata 21864926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 32094020 - 32093955
Alignment:
Q  169 gtgtcggacacgacacgtgtctgacac-ggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||    
T  32094020 gtgtcggacacgacacgtgtccgacaccggggacacgcctaatccgaggagtgttcgtgcttcata 32093955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 205
Target Start/End: Original strand, 5835265 - 5835337
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgc 205  Q
    ||||||| ||| ||| ||||||||||||||||||||||||| |||| |||| |||||||| || |||||||||    
T  5835265 agaaaataacataattcagtgtaattatatgtgtcggtgtcagacatgacatgtgtctgataccgggacacgc 5835337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 9482952 - 9483003
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacac 184  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| ||||||    
T  9482952 agaaaatcacacaattcagtgtaattatatgtgtcggtgtcggacgcgacac 9483003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 223
Target Start/End: Original strand, 12278853 - 12278943
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggaca-cgacacgtgtctgacacggggacacgccttatccaaggagtgtcc 223  Q
    ||||||| ||| ||| ||||||||||||||||||| |||||||||| | || |||||||||||| ||||||| ||| |||| ||||||||||    
T  12278853 agaaaatgacataattcagtgtaattatatgtgtc-gtgtcggacaccaacgcgtgtctgacaccgggacacacctaatcctaggagtgtcc 12278943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 233
Target Start/End: Original strand, 25822717 - 25822784
Alignment:
Q  166 tcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||| |||||||||||||||||||||||  |||||| |||| ||| |||||||||||||| ||||||    
T  25822717 tcggtatcggacacgacacgtgtctgacatcgggacatgcctaatctaaggagtgtccgtgtttcata 25822784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 222
Target Start/End: Original strand, 26733324 - 26733411
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtc 222  Q
    ||||||||| ||| |||| |||||| |||||||||||||||||||||| | |||| || ||||| |||||||| |||| ||| |||||    
T  26733324 aaaatcacataattcagtctaattaaatgtgtcggtgtcggacacgacgcatgtccgatacgggaacacgcctaatccgaggggtgtc 26733411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 107 - 233
Target Start/End: Original strand, 22484017 - 22484143
Alignment:
Q  107 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 206  Q
    ||||||| ||||| |||||   |||||||||||  || ||| |||| |||||||||||||||||||| |||| ||||| |||| ||||  | |||| | |    
T  22484017 gacacgccgacaccgctaataattttagaaaattgcataattcagtataattatatgtgtcggtgtcagacatgacacatgtccgacatcgagacatgtc 22484116  T
Q  207 ttatccaaggagtgtccgtgcttcata 233  Q
    | |||| || |||||||||||||||||    
T  22484117 tgatccgagaagtgtccgtgcttcata 22484143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 139 - 233
Target Start/End: Original strand, 33994236 - 33994330
Alignment:
Q  139 tcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||| ||| ||||| ||||| | ||||||||||| |||||||||| ||||  |||| | ||||||||| ||||||||||||| |||| ||||||    
T  33994236 tcacataattcagtgcaattacaagtgtcggtgtcagacacgacacatgtccaacaccgagacacgcctaatccaaggagtgttcgtgtttcata 33994330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 129 - 233
Target Start/End: Complemental strand, 18035909 - 18035806
Alignment:
Q  129 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgct 228  Q
    |||||| |||||||| ||| ||| ||||||| ||||||| ||||  || | ||||| |||||||||| || ||||| || |||| |||||||||||||||    
T  18035909 ttttaggaaatcacataattcagcgtaattacatgtgtcagtgtgagataggacacatgtctgacac-ggaacacgtctaatccgaggagtgtccgtgct 18035811  T
Q  229 tcata 233  Q
    |||||    
T  18035810 tcata 18035806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 233
Target Start/End: Original strand, 1433490 - 1433577
Alignment:
Q  151 gtgtaattatatgtgtcggtgtcg-----gacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||||||||||     |||| |||| ||||| |||||  ||||||| || |||| ||||||||||||||||||||    
T  1433490 gtgtaattatatgtgtcggtgtcgtgtcggacaagacatgtgtccgacaccaggacacgtctaatccgaggagtgtccgtgcttcata 1433577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 41020516 - 41020607
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 226  Q
    ||||||||| |||  |||||||||||||| |||||||| | ||||||||| | ||| |||| |||||||| || |||||| || ||||||||    
T  41020516 aaaatcacataatttagtgtaattatatgcgtcggtgttgaacacgacacatatctaacaccgggacacgtctaatccaaagaatgtccgtg 41020607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 233
Target Start/End: Complemental strand, 21568692 - 21568562
Alignment:
Q  104 ccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggaca-cgacacgtgtctgacacggggaca 202  Q
    |||||||||||||||| |||||   ||| |||||||| || |||  |||||||| ||||| |||||||||||| | | || |||||| ||||| ||||||    
T  21568692 ccggacacgctgacacggctaataatttaagaaaatctcataattaagtgtaatcatatgagtcggtgtcggataccaacgcgtgtcggacaccgggaca 21568593  T
Q  203 cgccttatccaaggagtgtccgtgcttcata 233  Q
     || | |||  ||||||||| ||||||||||    
T  21568592 tgcttaatctgaggagtgtctgtgcttcata 21568562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 233
Target Start/End: Original strand, 25481894 - 25482020
Alignment:
Q  107 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 206  Q
    ||||||| |||||||||||   ||| | ||||||||| ||| ||||||||||| | |||| |||||||||||||| | ||||| ||||  |  ||||||     
T  25481894 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgtcggacacgatatgtgtccgacattgaaacacgct 25481993  T
Q  207 ttatccaaggagtgtccgtgcttcata 233  Q
    | || ||| |||| |||||||||||||    
T  25481994 taattcaaagagtatccgtgcttcata 25482020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 223
Target Start/End: Complemental strand, 27093454 - 27093364
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtcc 223  Q
    ||||||||||| |||  |||||||||||||| ||||||||  ||||||||| ||||| |||||  |||||| ||| |||| | ||||||||    
T  27093454 agaaaatcacataatttagtgtaattatatgcgtcggtgttagacacgacatgtgtccgacactaggacacacctaatccgatgagtgtcc 27093364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 223
Target Start/End: Original strand, 27184847 - 27184937
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtcc 223  Q
    ||||||||||| |||  |||||||||||||| ||||||||  ||||||||| ||||| |||||  |||||| ||| |||| | ||||||||    
T  27184847 agaaaatcacataatttagtgtaattatatgcgtcggtgttagacacgacatgtgtccgacactaggacacacctaatccgatgagtgtcc 27184937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 233
Target Start/End: Original strand, 1401043 - 1401141
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||| ||||| ||| ||||||||||||| || |||||||| |||||||||  |||| ||||  ||||||| ||| |||  |||||||||| ||||||||    
T  1401043 agaaactcacataattcagtgtaattataagtatcggtgtccgacacgaca--tgtccgacatcgggacacacctaatctgaggagtgtccatgcttcat 1401140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 7438766 - 7438835
Alignment:
Q  164 tgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||  ||||||||| |||  |||||  |||||||||| || ||||||||||||||||||||||    
T  7438766 tgtcggtgtcaaacacgacacatgtgcgacactaggacacgcctaattcaaggagtgtccgtgcttcata 7438835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 19213817 - 19213870
Alignment:
Q  129 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgac 182  Q
    ||||| ||||||||| |||||||||||| || | ||||||||||||||||||||    
T  19213817 ttttaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcggacacgac 19213870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 22602751 - 22602710
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  22602751 agaaaatcacataattcagtgtaattatatgtgtcggtgtcg 22602710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 29763187 - 29763130
Alignment:
Q  176 acacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||||| ||||   |||||||||| |||| ||||||||||||||||||||    
T  29763187 acacgacacgtgtccgacatcaggacacgcctaatccgaggagtgtccgtgcttcata 29763130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 640134 - 640182
Alignment:
Q  136 aaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacac 184  Q
    |||||||| ||| ||||||||||||||||||||||||| || |||||||    
T  640134 aaatcacataattcagtgtaattatatgtgtcggtgtcagatacgacac 640182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 233
Target Start/End: Complemental strand, 7133285 - 7133213
Alignment:
Q  162 tgtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||||||||| ||| |||||| ||||| ||||||| ||| |||  ||||| ||||||||||||||    
T  7133285 tgtgtcggtgtcggacaccgacgcgtgtccgacactgggacacacctaatctgaggagcgtccgtgcttcata 7133213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 231
Target Start/End: Complemental strand, 8842322 - 8842282
Alignment:
Q  191 gacacggggacacgccttatccaaggagtgtccgtgcttca 231  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  8842322 gacaccgggacacgcctaatccaaggagtgtccgtgcttca 8842282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 13770750 - 13770810
Alignment:
Q  169 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 229  Q
    ||||||||||| ||||||||| ||||| || |||||||| |||| | ||||||||||||||    
T  13770750 gtgtcggacacaacacgtgtccgacaccggaacacgcctaatccgaagagtgtccgtgctt 13770810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 233
Target Start/End: Original strand, 24105712 - 24105796
Alignment:
Q  149 cagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||| | ||||||| ||||| ||| ||| ||||| ||||| ||||||||||| | || ||||||||  ||||||||||    
T  24105712 cagtgtaattacaagtgtcggagtcgggcacaacatgtgtccgacaccgggacacgcctaacccgaggagtgtttgtgcttcata 24105796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 174
Target Start/End: Original strand, 25791617 - 25791711
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    ||||||||| ||||||||||| |||| | ||||||| ||||| ||||| | ||| ||||| ||||| ||| || |||| ||||||||||||||||||    
T  25791617 atgaagcacggatacggacacagaca-ctgacacgccgacaccgctaattatttgagaaattcacataat-caatgtagttatatgtgtcggtgtcg 25791711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 3721111 - 3721158
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 180  Q
    ||||||||||| |||  ||| |||||||||||||||||||||||||||    
T  3721111 agaaaatcacataatttagtataattatatgtgtcggtgtcggacacg 3721158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 166 - 233
Target Start/End: Original strand, 4794951 - 4795018
Alignment:
Q  166 tcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||||||| ||||||||    ||||| || ||||||| |||||| ||||||||||    
T  4794951 tcggtgtcggacacgacacgtatctgacacctaaacacgtctaatccaagaagtgtctgtgcttcata 4795018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 135 - 214
Target Start/End: Original strand, 8234166 - 8234245
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaa 214  Q
    ||||| ||| ||| ||||||| ||| | ||| |||||||||||||||||| |||| ||||| | ||||||||| ||||||    
T  8234166 aaaataacataattcagtgtagttacaagtgccggtgtcggacacgacacatgtccgacaccgagacacgcctaatccaa 8234245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 172
Target Start/End: Original strand, 17851445 - 17851488
Alignment:
Q  129 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt 172  Q
    ||||||||||||||| ||| ||||||||||||||||||| ||||    
T  17851445 ttttagaaaatcacataattcagtgtaattatatgtgtctgtgt 17851488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 233
Target Start/End: Original strand, 17852056 - 17852118
Alignment:
Q  171 gtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||| |||||||||| ||||| | ||||| ||| || | ||||||||||||||||||||    
T  17852056 gtcggacatgacacgtgtccgacaccgagacacacctaattcgaggagtgtccgtgcttcata 17852118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 35862027 - 35862069
Alignment:
Q  191 gacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||| |||||||||| |||| ||||||||||||||||||||    
T  35862027 gacacgaggacacgcctaatccgaggagtgtccgtgcttcata 35862069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 160
Target Start/End: Original strand, 1656676 - 1656721
Alignment:
Q  115 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattat 160  Q
    |||||| |||||||||||| ||||||||| ||| ||||||||||||    
T  1656676 gacacaactaaattttttaaaaaatcacataattcagtgtaattat 1656721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 233
Target Start/End: Complemental strand, 3554528 - 3554447
Alignment:
Q  152 tgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||  ||||||||||||||||||||| | ||| |||| | |||||| || || | | ||||||| ||||||||||    
T  3554528 tgtaattatagatgtcggtgtcggacacgacacatatctaacactgagacacgtctaattcgaagagtgtctgtgcttcata 3554447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 20545249 - 20545184
Alignment:
Q  169 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatat 234  Q
    |||||| ||||||||| |||| ||||||||||||||  | || | ||||||||| |||||||||||    
T  20545249 gtgtcgtacacgacacatgtccgacacggggacacgtttaattcgaggagtgtctgtgcttcatat 20545184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 178
Target Start/End: Original strand, 24146830 - 24146879
Alignment:
Q  129 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggaca 178  Q
    ||||||||||||||| ||| || | |||||||||||||||||||| ||||    
T  24146830 ttttagaaaatcacataattcaatataattatatgtgtcggtgtctgaca 24146879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 26033461 - 26033392
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||||| |||| |||||||||| || || | ||||| ||| |||| ||||||||||||| |||||    
T  26033461 gtgtcggtgtcagacatgacacgtgtccgataccgcgacacacctaatccgaggagtgtccgtgtttcat 26033392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 41918906 - 41918975
Alignment:
Q  156 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgt 225  Q
    ||||||| ||||| ||||| ||||| || |||||||||||||  || ||| |||||| ||||||||||||    
T  41918906 attatatatgtcgttgtcgaacacggcaagtgtctgacacggaaacccgcattatccgaggagtgtccgt 41918975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 2334314 - 2334378
Alignment:
Q  169 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||||||| |||| ||||| |  ||||| || |||| ||||||||||||| ||||||    
T  2334314 gtgtcggacacgacacatgtccgacactgaaacacgtctaatccgaggagtgtccgtgtttcata 2334378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 6490786 - 6490834
Alignment:
Q  185 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||| ||||| ||||||||| | |||| ||||||||||||||||||||    
T  6490786 gtgtccgacaccgggacacgcttaatccgaggagtgtccgtgcttcata 6490834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 234
Target Start/End: Complemental strand, 7197392 - 7197237
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 177  Q
    ||||||||| |||||| |||| ||||  | |||||| |||||||||||   ||| | |||||||   ||| || |||||||| | |||||||||||||||    
T  7197392 atgaagcacggatacgaacacagacattg-acacgccgacacagctaataatttaaaaaaatcatttaattcaatgtaattacaagtgtcggtgtcggac 7197294  T
Q  178 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatat 234  Q
    || |||| |||| ||||| |||| || | |  ||| || | ||||||||||||||||    
T  7197293 acaacacatgtccgacaccgggatactcttattccgagaaatgtccgtgcttcatat 7197237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 9933332 - 9933364
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacac 195  Q
    |||||||||||||||||||||| ||||||||||    
T  9933332 gtgtcggtgtcggacacgacacatgtctgacac 9933364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 233
Target Start/End: Original strand, 10359633 - 10359717
Alignment:
Q  149 cagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||| |||||| ||||||| |||||  ||||| ||||| | |||||| || |||| |   ||||||||||||||||    
T  10359633 cagtgtaattataggtgtcgatgtcggatacgacttgtgtccgacaccgagacacgtctaatccgaaaggtgtccgtgcttcata 10359717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 233
Target Start/End: Complemental strand, 11738236 - 11738152
Alignment:
Q  149 cagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||| |||||| ||||||| | || ||||||   |||| | ||||||||| |||  ||||||||||||| ||||||    
T  11738236 cagtgtaattatacgtgtcgctgtcggaaatgagacgtgttccacactgagacacgcctaatcagaggagtgtccgtgtttcata 11738152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 28155624 - 28155672
Alignment:
Q  185 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||| |||||  |||||||||| ||||||||| |||||||||||||||    
T  28155624 gtgtcggacaccaggacacgcctaatccaaggaatgtccgtgcttcata 28155672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 174
Target Start/End: Original strand, 32308084 - 32308179
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    |||||||||  ||||| ||| |||||| | |||||| ||||| |||||   ||| ||||||||||| ||| |||||||||| |||||||| ||||||    
T  32308084 atgaagcacaaatacgaacatggacactg-acacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcg 32308179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 6063 - 5926
Alignment:
Q  107 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgga-----------cacgacacgtgtctgacac 195  Q
    ||||||| || ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |           |||||||||||||||||||    
T  6063 gacacgccgatacatctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtatcggtgtcgaacacgacacgtgtctgacac 5964  T
Q  196 ggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
     | ||||||||||||||||||||||||||||| |||||    
T  5963 agagacacgccttatccaaggagtgtccgtgcctcata 5926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 135 - 233
Target Start/End: Complemental strand, 501 - 403
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||| ||||||||||| | |||||||||||||||||||| |||||| ||||| ||||||| ||| |||| ||||||||||||||||||||    
T  501 aaaatcacaaaattcagtgtaattacaagtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 91 - 233
Target Start/End: Original strand, 14506 - 14645
Alignment:
Q  91 acggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtct 190  Q
    ||||| ||||||||||||||||| |||||| ||||   ||| | ||||||||| ||| ||||||||||| | |||   |||||||||||||||||||||     
T  14506 acggatacggacaccggacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtg---gtgtcggacacgacacgtgtcc 14602  T
Q  191 gacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||| | ||||||||| ||| ||||||||| |||||||||||    
T  14603 gacaccgagacacgcctaatcgaaggagtgtacgtgcttcata 14645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 94 - 174
Target Start/End: Original strand, 9878 - 9957
Alignment:
Q  94 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    |||| |||||||| |||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9878 gacatggacaccg-acacgccgacacagctaatttttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcg 9957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 13454 - 13523
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||||||||||||||||| |||||||||  |||||| ||| ||||||||||||||||||||||||    
T  13454 gtgtcggtgtcggacacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcat 13523  T

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Target: scaffold0152 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 21873 - 21804
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||||||||||||||||| |||||||||  |||||| ||| ||||||||||||||||||||||||    
T  21873 gtgtcggtgtcggacacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcat 21804  T

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Target: scaffold0083 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 149 - 233
Target Start/End: Complemental strand, 45555 - 45471
Alignment:
Q  149 cagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||| | |||| |||| |||||| || ||| |||||||||||    
T  45555 cagtgtaattacaagtgtcggtgtcggacacgacacgtgtctgacaccgcgacatgcctaatccaaagattgtacgtgcttcata 45471  T

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Target: scaffold0050 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 70298 - 70394
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 231  Q
    ||||| ||| ||| ||||||||||||| ||||||||||||||||||||||||||| |||||  ||||| |||| |||| | |||||| |||||||||    
T  70298 aaaataacataattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaccaggacatgcctaatccgatgagtgttcgtgcttca 70394  T

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Target: scaffold0053 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 233
Target Start/End: Original strand, 8833 - 8916
Alignment:
Q  150 agtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||| | ||||||||| |||  |||||| |||||||||||||    
T  8833 agtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggagtctccgtgcttcata 8916  T

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Target: scaffold0003 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 241653 - 241723
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||| |||||||||||||||||||||| ||||| ||||||||||| |||| || |||||||||||||||||    
T  241653 gtgttggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcata 241723  T

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Target: scaffold0793 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 233
Target Start/End: Complemental strand, 4922 - 4822
Alignment:
Q  135 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtc--ggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||| ||| ||||||||||| | |||| ||||||  | ||||||||| |||| ||||| ||||||||||| |||| |||||||||||||||||||    
T  4922 aaaatcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 4823  T
Q  233 a 233  Q
    |    
T  4822 a 4822  T

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Target: scaffold0475 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 150 - 233
Target Start/End: Original strand, 3343 - 3426
Alignment:
Q  150 agtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||| | ||||| |||||||||| ||||||||   ||||| ||||||||||| |||| ||||||||||||||||||||    
T  3343 agtgtaattacaagtgtcagtgtcggacaagacacgtggtggacactgggacacgcctaatccgaggagtgtccgtgcttcata 3426  T

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Target: scaffold0380 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 8649 - 8719
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||| |||| | |||||||||||||| ||||| |||| |||||| |||||||||||||||||||||||||    
T  8649 gtgtctgtgttgaacacgacacgtgtccgacactgggatacgcctaatccaaggagtgtccgtgcttcata 8719  T

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Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 71784 - 71854
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||| ||||||||| ||||| |||||||| || |||| ||||||||| ||||||||||    
T  71784 gtgtcggtgtcggacacaacacgtgtccgacaccgggacacgactaatccgaggagtgtcggtgcttcata 71854  T

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Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 234
Target Start/End: Original strand, 92875 - 92941
Alignment:
Q  168 ggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatat 234  Q
    ||||||||||||||||| |||| |||||  |||||||||| |||| |||||||||||||||||||||    
T  92875 ggtgtcggacacgacacatgtcggacacctggacacgcctaatccgaggagtgtccgtgcttcatat 92941  T

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Target: scaffold0512 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 152 - 233
Target Start/End: Complemental strand, 5058 - 4977
Alignment:
Q  152 tgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||| | ||||||||||||||||||||||||||| ||||  | |||| |||| |||| ||||||||| ||||||||||    
T  5058 tgtaattacaagtgtcggtgtcggacacgacacgtgtccgacattgagacatgcctaatccgaggagtgtctgtgcttcata 4977  T

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Target: scaffold0450 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 8635 - 8565
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||| |||||||||| ||||||| ||||| || |||||||| || | ||||||||||||||||||||    
T  8635 gtgtcggtatcggacacgatacgtgtccgacactggtacacgcctaattcgaggagtgtccgtgcttcata 8565  T

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Target: scaffold0123 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 44593 - 44529
Alignment:
Q  106 ggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggt 170  Q
    ||||| |||||||| ||||||  ||| ||||||||||| ||| ||||||||||||||||||||||    
T  44593 ggacaagctgacaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcggt 44529  T

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Target: scaffold0044 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 53239 - 53303
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgc 227  Q
    |||||||||||||||| |||||||||| ||||| ||||||||  | ||||||| |||||||||||    
T  53239 gtgtcggtgtcggacatgacacgtgtccgacaccgggacacgtttaatccaagaagtgtccgtgc 53303  T

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Target: scaffold0022 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 233
Target Start/End: Original strand, 90861 - 90961
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||| | ||| |||||||||||||| ||||| |||| ||||| ||||||||| |||||    |||||||| |||||| ||||||  |||||||||    
T  90861 agaaaatcatataattcagtgtaattatatatgtcgatgtcagacacaacacgtgtccgacaccaaaacacgcctaatccaatgagtgtatgtgcttcat 90960  T
Q  233 a 233  Q
    |    
T  90961 a 90961  T

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Target: scaffold0136 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 3849 - 3779
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||| ||||||||||||||||| |||| ||||  | ||||||||| |||| |||||||||| |||||||||    
T  3849 gtgttggtgtcggacacgacacatgtccgacatcgagacacgcctaatccgaggagtgtccttgcttcata 3779  T

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Target: scaffold0086 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 2987 - 3057
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||| || ||||||||||||||  ||||| || |||||||| |||| ||||||||||||||| ||||    
T  2987 gtgtcggtatcagacacgacacgtgttcgacaccggaacacgcctaatccgaggagtgtccgtgctccata 3057  T

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Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 9747 - 9678
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    |||| |||||| |||||||||| |||||||||  ||||||||  | |||| |||||||||||||||||||    
T  9747 gtgttggtgtcagacacgacacttgtctgacatcgggacacgtataatccgaggagtgtccgtgcttcat 9678  T

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Target: scaffold0036; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 9788 - 9747
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    ||||||||||  ||| ||||||||||||||||||||||||||    
T  9788 agaaaatcacttaattcagtgtaattatatgtgtcggtgtcg 9747  T

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Target: scaffold0279 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 189
Target Start/End: Original strand, 17737 - 17844
Alignment:
Q  78 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 177  Q
    ||||||||| |||||||||||| |||| ||||||   |||||| |||  ||||| ||||||||||| ||  | |||||||| |||||||||||||| |||    
T  17737 atgaagcacagatacggacacg-acac-ggacacc--gacacaactagttttttaagaaaatcacacaactcggtgtaattgtatgtgtcggtgtcagac 17832  T
Q  178 acgacacgtgtc 189  Q
    |||||| |||||    
T  17833 acgacatgtgtc 17844  T

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Target: scaffold0227 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 15045 - 15089
Alignment:
Q  189 ctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||    
T  15045 ctgacacggggacacgccttatccgaggagtgtttgtgcttcata 15089  T

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Target: scaffold0697 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 1683 - 1733
Alignment:
Q  154 taattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacg 204  Q
    |||||||| |||||||||||||||||||||| |||| |||||  |||||||    
T  1683 taattataagtgtcggtgtcggacacgacacatgtccgacactaggacacg 1733  T

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Target: scaffold0154 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 13472 - 13542
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    |||||||||||||||||||||||| |  ||||  |||| || ||| |||| |||||||||||| |||||||    
T  13472 gtgtcggtgtcggacacgacacgtatacgacatcgggatacacctaatccgaggagtgtccgtacttcata 13542  T

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Target: scaffold0103 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 189
Target Start/End: Original strand, 51785 - 51888
Alignment:
Q  88 gatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatg---tgtcggtgtcggacacgacac 184  Q
    ||||||||||||||||| | |||||| |||||||||||   ||| | ||||||||| ||| ||||||||||| | |   |||||||||| ||||||| ||    
T  51785 gatacggacacggacactg-acacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttgtcggtgtcagacacgatac 51883  T
Q  185 gtgtc 189  Q
    |||||    
T  51884 gtgtc 51888  T

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Target: scaffold0057 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 24083 - 24154
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtct--gacacggggacacgccttatccaaggagtgtccgtgcttcata 233  Q
    ||||||||||||||||| |||||||| |  ||||| || |||||||| |||| | ||||||||||||||||||    
T  24083 gtgtcggtgtcggacacaacacgtgtgtccgacactgg-acacgcctaatccgatgagtgtccgtgcttcata 24154  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 135353 - 135312
Alignment:
Q  133 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 174  Q
    ||||||||||| ||| | ||||||||||||||||||||||||    
T  135353 agaaaatcacataattctgtgtaattatatgtgtcggtgtcg 135312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 263372 - 263303
Alignment:
Q  163 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 232  Q
    ||||||||||| ||||||||||||||  || ||   ||||||||| |||| ||||||||||||| |||||    
T  263372 gtgtcggtgtcagacacgacacgtgttcgataccaagacacgcctaatccgaggagtgtccgtggttcat 263303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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