View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15195_low_12 (Length: 514)

Name: NF15195_low_12
Description: NF15195
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15195_low_12
NF15195_low_12
[»] chr6 (4 HSPs)
chr6 (24-404)||(8270110-8270492)
chr6 (24-404)||(799335-799717)
chr6 (309-404)||(8274826-8274919)
chr6 (309-404)||(794869-794962)
[»] chr7 (5 HSPs)
chr7 (24-398)||(6689115-6689491)
chr7 (284-404)||(6693859-6693977)
chr7 (309-404)||(33756651-33756744)
chr7 (328-395)||(27222203-27222270)
chr7 (310-388)||(31760751-31760829)
[»] chr5 (4 HSPs)
chr5 (24-404)||(19941055-19941436)
chr5 (309-400)||(42839350-42839439)
chr5 (309-404)||(19945809-19945902)
chr5 (308-352)||(7739903-7739947)
[»] chr2 (3 HSPs)
chr2 (19-199)||(37569086-37569269)
chr2 (295-414)||(37568939-37569058)
chr2 (309-389)||(31582832-31582910)
[»] chr4 (5 HSPs)
chr4 (24-230)||(11891128-11891338)
chr4 (64-222)||(11906143-11906305)
chr4 (309-390)||(11906397-11906473)
chr4 (283-404)||(11891393-11891512)
chr4 (310-398)||(42176962-42177048)
[»] chr1 (1 HSPs)
chr1 (328-404)||(31178300-31178377)
[»] chr8 (1 HSPs)
chr8 (309-370)||(26199849-26199908)


Alignment Details
Target: chr6 (Bit Score: 130; Significance: 4e-67; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 24 - 404
Target Start/End: Complemental strand, 8270492 - 8270110
Alignment:
Q  24 tgcatcttccaaaatccaaa--ccgcaccatcaaannnnnnnattttctcctttccatcgtctgtagccatgactcccacttgaatctaacttcctctag 121  Q
    |||||||||||||| |||||  |||||||||| ||       |||||| ||||||| ||||||| |||||||||| |||||||||||||||||||| | |    
T  8270492 tgcatcttccaaaagccaaagtccgcaccatcgaacttttcaattttcacctttccttcgtctgcagccatgacttccacttgaatctaacttcctttgg 8270393  T
Q  122 atcttctttgacaatttttgtgaac---agtgctttagaacacctctgtgaacaaattggtaacgctaaccaatattttcactattcacgaaaattacta 218  Q
    |||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  8270392 atcttctttgacaatttttgtgaactaatgtgctttagaacacctctgtgaacaaattggtaacgctgaccaata-tttcactattcacgaaaattacta 8270294  T
Q  219 ttcacatgaataatacttttgctnnnnnnnnnnnnngatatcgagccaagcgccctgaaagcaattgttaggaaattatgcaaacaattt--ccatagtc 316  Q
    ||||| |||||| |||||||||              |||| ||| ||| | || |||| | || ||||||||||| || ||  |||||||  ||||||||    
T  8270293 ttcacgtgaatagtacttttgccaaaaattaacaaggataccgaaccaggtgctctgataccagttgttaggaaactaggc--acaatttccccatagtc 8270196  T
Q  317 aaattaaatgaaagtgaaataaatgcggaataatagcacacacaaaattgttaatgaaattctgccaataatgcttactctctggact 404  Q
    | ||||| || ||||||||||||||| ||||||||  | ||||||||||||||| ||| ||| ||||||||||| ||||||| |||||    
T  8270195 agattaagtggaagtgaaataaatgcagaataata--agacacaaaattgttaacgaagttcggccaataatgcctactctccggact 8270110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 24 - 404
Target Start/End: Original strand, 799335 - 799717
Alignment:
Q  24 tgcatcttccaaaatccaaa--ccgcaccatcaaannnnnnnattttctcctttccatcgtctgtagccatgactcccacttgaatctaacttcctctag 121  Q
    |||||||||||||| |||||  |||||||||| ||       |||||| ||| ||| ||||| | |||||||||| |||||||||||||||||||| | |    
T  799335 tgcatcttccaaaagccaaagtccgcaccatcgaacttttcaattttcacctctccttcgtcagcagccatgacttccacttgaatctaacttcctttgg 799434  T
Q  122 atcttctttgacaatttttgtgaac---agtgctttagaacacctctgtgaacaaattggtaacgctaaccaatattttcactattcacgaaaattacta 218  Q
    |||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  799435 atcttctttgacaatttttgtgaactaatgtgctttagaacacctctgtgaacaaattggtaacgctgaccaata-tttcactattcacgaaaattacta 799533  T
Q  219 ttcacatgaataatacttttgctnnnnnnnnnnnnngatatcgagccaagcgccctgaaagcaattgttaggaaattatgcaaacaattt--ccatagtc 316  Q
    ||||| |||||| |||||||||              |||| ||| ||| | || |||| | || ||||||||||| || ||  |||||||  ||||||||    
T  799534 ttcacgtgaatagtacttttgccaaaaattaacaaggataccgaaccaggtgctctgataccagttgttaggaaactaggc--acaatttccccatagtc 799631  T
Q  317 aaattaaatgaaagtgaaataaatgcggaataatagcacacacaaaattgttaatgaaattctgccaataatgcttactctctggact 404  Q
    | ||||| || ||||||||||||||||||||||||  | ||||||||||||||| ||| ||| ||||||||||| ||||||| |||||    
T  799632 agattaagtggaagtgaaataaatgcggaataata--agacacaaaattgttaacgaagttcggccaataatgcctactctccggact 799717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 309 - 404
Target Start/End: Complemental strand, 8274919 - 8274826
Alignment:
Q  309 ccatagtcaaattaaatgaaagtgaaataaatgcggaataatagcacacacaaaattgttaatgaaattctgccaataatgcttactctctggact 404  Q
    ||||||||| ||||| || ||||||||||||||||||||||||  | ||||||||||||||| ||| ||| ||||||||||| ||||||| |||||    
T  8274919 ccatagtcagattaagtggaagtgaaataaatgcggaataata--agacacaaaattgttaacgaagttcggccaataatgcctactctccggact 8274826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 309 - 404
Target Start/End: Original strand, 794869 - 794962
Alignment:
Q  309 ccatagtcaaattaaatgaaagtgaaataaatgcggaataatagcacacacaaaattgttaatgaaattctgccaataatgcttactctctggact 404  Q
    ||||| ||| ||||| || |||||||||||||| |||||||||  | ||||||||||||||| ||| ||| ||||||||||| ||||||| |||||    
T  794869 ccataatcagattaagtggaagtgaaataaatgtggaataata--agacacaaaattgttaacgaagttcggccaataatgcctactctccggact 794962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 128; Significance: 6e-66; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 24 - 398
Target Start/End: Complemental strand, 6689491 - 6689115
Alignment:
Q  24 tgcatcttccaaaatccaaa--ccgcaccatcaaannnnnnnattttctcctttccatcgtctgtagccatgactcccacttgaatctaacttcctctag 121  Q
    |||||||||||||| |||||  |||||||||| ||       |||||| ||||||| ||||||| | |||||||| |||||||||||||||||||| | |    
T  6689491 tgcatcttccaaaagccaaagtccgcaccatcgaacttttcaattttcacctttccttcgtctgcaaccatgacttccacttgaatctaacttcctttgg 6689392  T
Q  122 atcttctttgacaatttttgtgaac---agtgctttagaacacctctgtgaacaaattggtaacgctaaccaatattttcactattcacgaaaattacta 218  Q
    |||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  6689391 atcttctttgacaatttttgtgaactaatgtgctttagaacacctctgtgaacaaattggtaacgctgaccaata-tttcactattcacgaaaattacta 6689293  T
Q  219 ttcacatgaataatacttttgctnnnnnnnnnnnnngatatcgagccaagcgccctgaaagcaattgttaggaaattatgcaaacaatttccatagtcaa 318  Q
    ||||  |||||| |||||||||              |||| ||| ||| | || |||| | || ||||||||||| |||||| |  ||| |||||||||     
T  6689292 ttcatgtgaatagtacttttgccaaaaattaacaaggataccgaaccaggtgctctgataccagttgttaggaaactatgcacaatattcccatagtcag 6689193  T
Q  319 attaaatgaaagtgaaataaatgcggaataatagcacacacaaaattgttaatgaaattctgccaataatgcttactctc 398  Q
    ||||| || ||| ||||||||||||||||||||  | ||||||||||||||| ||| ||| ||||||||||| |||||||    
T  6689192 attaagtggaagagaaataaatgcggaataata--agacacaaaattgttaacgaagttcggccaataatgcctactctc 6689115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 284 - 404
Target Start/End: Complemental strand, 6693977 - 6693859
Alignment:
Q  284 tgttaggaaattatgcaaacaatttccatagtcaaattaaatgaaagtgaaataaatgcggaataatagcacacacaaaattgttaatgaaattctgcca 383  Q
    |||||||||| || ||| |  ||||||||||||| ||||| || ||||||||||||||||||||||||  | ||||||||||||||| ||| ||| ||||    
T  6693977 tgttaggaaactaggcacaatatttccatagtcagattaagtggaagtgaaataaatgcggaataata--agacacaaaattgttaacgaagttcggcca 6693880  T
Q  384 ataatgcttactctctggact 404  Q
    ||||||| ||||||| |||||    
T  6693879 ataatgcctactctccggact 6693859  T

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Target: chr7; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 309 - 404
Target Start/End: Complemental strand, 33756744 - 33756651
Alignment:
Q  309 ccatagtcaaattaaatgaaagtgaaataaatgcggaataatagcacacacaaaattgttaatgaaattctgccaataatgcttactctctggact 404  Q
    ||||||||| |||||||| |||||||||||||||| |||||||  |||||||||||| |||| ||| ||| ||||||||| | |||||||||||||    
T  33756744 ccatagtcagattaaatggaagtgaaataaatgcgaaataata--acacacaaaattcttaacgaagttcggccaataatacctactctctggact 33756651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 395
Target Start/End: Complemental strand, 27222270 - 27222203
Alignment:
Q  328 aagtgaaataaatgcggaataatagcacacacaaaattgttaatgaaattctgccaataatgcttact 395  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||| |||  ||||| |||| ||||    
T  27222270 aagtgaaataaatgcggaataatagcacacacaaaattgataacgaagttcgaccaattatgcctact 27222203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 310 - 388
Target Start/End: Complemental strand, 31760829 - 31760751
Alignment:
Q  310 catagtcaaattaaatgaaagtgaaataaatgcggaataatagcacacacaaaattgttaatgaaattctgccaataat 388  Q
    |||||| ||||||| || |||| ||||||||||||||||| |  | ||||||| ||||||| ||| ||| |||||||||    
T  31760829 catagttaaattaagtggaagtaaaataaatgcggaataacataagacacaaatttgttaacgaagttcagccaataat 31760751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 6e-66; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 24 - 404
Target Start/End: Complemental strand, 19941436 - 19941055
Alignment:
Q  24 tgcatcttccaaaatccaaa--ccgcaccatcaaannnnnnnattttctcctttccatcgtctgtagccatgactcccacttgaatctaacttcctctag 121  Q
    |||||||||||||| |||||  |||||||||| ||       |||||| ||||||| ||||||| |||||||||| |||||||||||||||||||| | |    
T  19941436 tgcatcttccaaaagccaaagtccgcaccatcgaacttttcaattttcacctttccttcgtctgcagccatgacttccacttgaatctaacttcctttgg 19941337  T
Q  122 atcttctttgacaatttttgtgaac---agtgctttagaacacctctgtgaacaaattggtaacgctaaccaatattttcactattcacgaaaattacta 218  Q
    |||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  19941336 atcttctttgacaatttttgtgaactaatgtgctttagaacacctctgtgaacaaattggtaacgctgaccaata-tttcactattcacgaaaattacta 19941238  T
Q  219 ttcacatgaataatacttttgctnnnnnnnnnnnnngatatcgagccaagcgccctgaaagcaattgttaggaaattatgcaaacaattt-ccatagtca 317  Q
    ||||| |||||| |||||||||              |||| |||  || | || |||| | || ||||||||||| || ||  ||||||| |||||||||    
T  19941237 ttcacgtgaatagtacttttgccaaaaattaacaaggataccgaatcaggtgctctgataccagttgttaggaaactaggc--acaatttcccatagtca 19941140  T
Q  318 aattaaatgaaagtgaaataaatgcggaataatagcacacacaaaattgttaatgaaattctgccaataatgcttactctctggact 404  Q
     ||||| || ||||||||||||||||||||||||  | ||||||||||||||| ||| ||  ||||||||||| ||||||| |||||    
T  19941139 gattaagtggaagtgaaataaatgcggaataata--agacacaaaattgttaacgaagtttggccaataatgcctactctccggact 19941055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 309 - 400
Target Start/End: Complemental strand, 42839439 - 42839350
Alignment:
Q  309 ccatagtcaaattaaatgaaagtgaaataaatgcggaataatagcacacacaaaattgttaatgaaattctgccaataatgcttactctctg 400  Q
    ||||||||||||||| || ||||||||||||||||||||||||  ||||||||| ||||||| ||| ||| ||||||||| | |||||||||    
T  42839439 ccatagtcaaattaagtggaagtgaaataaatgcggaataata--acacacaaagttgttaacgaagttcggccaataatacctactctctg 42839350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 404
Target Start/End: Complemental strand, 19945902 - 19945809
Alignment:
Q  309 ccatagtcaaattaaatgaaagtgaaataaatgcggaataatagcacacacaaaattgttaatgaaattctgccaataatgcttactctctggact 404  Q
    ||||||||| ||||| || ||||||||||||||||||||||||  | ||||||||||||||| ||| ||  ||||||||||| ||||||| |||||    
T  19945902 ccatagtcagattaagtggaagtgaaataaatgcggaataata--agacacaaaattgttaacgaagtttggccaataatgcctactctccggact 19945809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 352
Target Start/End: Complemental strand, 7739947 - 7739903
Alignment:
Q  308 tccatagtcaaattaaatgaaagtgaaataaatgcggaataatag 352  Q
    ||||||||||||||||||| |||| ||||||||||||||| ||||    
T  7739947 tccatagtcaaattaaatggaagttaaataaatgcggaatgatag 7739903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 9e-62; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 19 - 199
Target Start/End: Complemental strand, 37569269 - 37569086
Alignment:
Q  19 tgatatgcatcttccaaaatccaaaccgcaccatcaaannnnnnnattttctcctttccatcgtctgtagccatgactcccacttgaatctaacttcctc 118  Q
    ||||||||||||||||||||||||||||||||||| ||       |||||| ||||||| |||||||||||||||||||| |||||||||||||||||||    
T  37569269 tgatatgcatcttccaaaatccaaaccgcaccatcgaaaatttttattttcacctttccgtcgtctgtagccatgactccaacttgaatctaacttcctc 37569170  T
Q  119 tagatcttctttgacaatttttgtga---acagtgctttagaacacctctgtgaacaaattggtaacgctaaccaatattttca 199  Q
     |||||||||||||||||||||||||   || |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  37569169 cagatcttctttgacaatttttgtgaaccactgtgctttagaacacctctgtgaacaaattggtaacgctgaccaatattttca 37569086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 295 - 414
Target Start/End: Complemental strand, 37569058 - 37568939
Alignment:
Q  295 tatgcaaacaatttccatagtcaaattaaatgaaagtgaaataaatgcggaataatagcacacacaaaattgttaatgaaattctgccaataatgcttac 394  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  37569058 tatgcaaacaatttccatagtcaaattaaatggaagtgaaataaatgcggaataatagcacacacaaaattgttaatgaaattcggccaataatgcctac 37568959  T
Q  395 tctctggactaatgcaaatc 414  Q
    ||| ||||||||||||||||    
T  37568958 tctatggactaatgcaaatc 37568939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 309 - 389
Target Start/End: Original strand, 31582832 - 31582910
Alignment:
Q  309 ccatagtcaaattaaatgaaagtgaaataaatgcggaataatagcacacacaaaattgttaatgaaattctgccaataatg 389  Q
    ||||||||| ||||| || |||||||||||||  |||||||||  ||||||||||||||||||||| ||| | ||||||||    
T  31582832 ccatagtcagattaagtggaagtgaaataaatatggaataata--acacacaaaattgttaatgaagttcggtcaataatg 31582910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 7e-41; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 24 - 230
Target Start/End: Original strand, 11891128 - 11891338
Alignment:
Q  24 tgcatcttccaaaatccaaa--ccgcaccatcaaannnnnnnattttctcctttccatcgtctgtagccatgactcccacttgaatctaacttcctctag 121  Q
    |||||||||||||| |||||  |||||||||||||       |||||| | |||||  |||||| ||||||||||| ||||||||||||||| | ||| |    
T  11891128 tgcatcttccaaaagccaaagtccgcaccatcaaactttttgattttcacgtttcctgcgtctgcagccatgactctcacttgaatctaact-cttctgg 11891226  T
Q  122 atcttctttgacaatttttgtgaaca---gtgctttagaacacctctgtgaacaaattggtaacgctaaccaatattttcactattcacgaaaattacta 218  Q
    |||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||| || |||||| ||  ||| |||||||||||||| ||    
T  11891227 atcttctttgacaatttttgtgaactaatgtgctttagaacacctctgtgaacaaattggtaacactgaccaattttcgcaccattcacgaaaattatta 11891326  T
Q  219 ttcacatgaata 230  Q
    ||||| ||||||    
T  11891327 ttcacgtgaata 11891338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 64 - 222
Target Start/End: Original strand, 11906143 - 11906305
Alignment:
Q  64 attttctcctttccatcgtctgtagccatgactcccacttgaatctaacttcctctagatcttctttgacaattttt-gtgaacag---tgctttagaac 159  Q
    |||||| ||||||| |||||||  || ||||||||||||||||||||||| ||||| ||| |||||||||||||||| ||||||     |||||||||||    
T  11906143 attttcacctttccttcgtctgcggcgatgactcccacttgaatctaactacctcttgatattctttgacaattttttgtgaaccactatgctttagaac 11906242  T
Q  160 acctctgtgaacaaattggtaacgctaaccaatattttcactattcacgaaaattactattca 222  Q
    ||||| ||||||||||||||||| || ||||||  || |||| ||||| ||||||||||||||    
T  11906243 acctccgtgaacaaattggtaacactgaccaattattgcactcttcacaaaaattactattca 11906305  T

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Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 309 - 390
Target Start/End: Original strand, 11906397 - 11906473
Alignment:
Q  309 ccatagtcaaattaaatgaaagtgaaataaatgcggaataatagcacacacaaaattgttaatgaaattctgccaataatgc 390  Q
    ||||||||| ||||| || ||||||||   |||||||||||||  ||||||||||||||||||||| ||| |||||||||||    
T  11906397 ccatagtcagattaagtggaagtgaaa---atgcggaataata--acacacaaaattgttaatgaagttcggccaataatgc 11906473  T

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Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 404
Target Start/End: Original strand, 11891393 - 11891512
Alignment:
Q  283 ttgttaggaaattatgcaaacaatttcc--atagtcaaattaaatgaaagtgaaataaatgcggaataatagcacacacaaaattgttaatgaaattctg 380  Q
    ||||||||||| || |||||  ||||||  ||||||| ||||| || ||||||||||||||| ||||||||  ||||| ||||||||||  ||| |||      
T  11891393 ttgttaggaaactacgcaaa--atttcctcatagtcagattaagtggaagtgaaataaatgcagaataata--acacaaaaaattgttagcgaagttcgt 11891488  T
Q  381 ccaataatgcttactctctggact 404  Q
    |||||||| | |||||||||||||    
T  11891489 ccaataatacctactctctggact 11891512  T

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Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 398
Target Start/End: Complemental strand, 42177048 - 42176962
Alignment:
Q  310 catagtcaaattaaatgaaagtgaaataaatgcggaataatagcacacacaaaattgttaatgaaattctgccaataatgcttactctc 398  Q
    |||||||| ||||| || |||||||||||||  | |||||||  | |||||||||| |||| ||| ||| ||||||||||| |||||||    
T  42177048 catagtcagattaagtggaagtgaaataaatatgaaataata--agacacaaaattattaacgaagttcggccaataatgcctactctc 42176962  T

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Target: chr1 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 404
Target Start/End: Original strand, 31178300 - 31178377
Alignment:
Q  328 aagtgaaataaatgcggaataatagca-cacacaaaattgttaatgaaattctgccaataatgcttactctctggact 404  Q
    |||| |||||||||||||||||||  | |||||||||||||||| ||| ||| ||||||||||| ||||||| |||||    
T  31178300 aagtaaaataaatgcggaataataataacacacaaaattgttaacgaagttcggccaataatgcctactctccggact 31178377  T

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Target: chr8 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 26199908 - 26199849
Alignment:
Q  309 ccatagtcaaattaaatgaaagtgaaataaatgcggaataatagcacacacaaaattgttaa 370  Q
    ||||||||| ||||| || ||||||||||||||||||||||||  | |||||||||||||||    
T  26199908 ccatagtcagattaagtggaagtgaaataaatgcggaataata--agacacaaaattgttaa 26199849  T

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