View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15195_low_39 (Length: 285)

Name: NF15195_low_39
Description: NF15195
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15195_low_39
NF15195_low_39
[»] chr1 (4 HSPs)
chr1 (9-270)||(28126645-28126906)
chr1 (9-270)||(28163346-28163607)
chr1 (41-267)||(267342-267568)
chr1 (114-267)||(26136842-26136995)
[»] scaffold0349 (1 HSPs)
scaffold0349 (18-267)||(2518-2767)
[»] chr6 (57 HSPs)
chr6 (18-267)||(27717478-27717727)
chr6 (15-267)||(27591997-27592249)
chr6 (15-257)||(25484023-25484265)
chr6 (15-257)||(26143832-26144074)
chr6 (15-267)||(27676596-27676848)
chr6 (15-267)||(26647433-26647685)
chr6 (15-267)||(26753401-26753653)
chr6 (15-257)||(25492295-25492537)
chr6 (15-257)||(25580686-25580928)
chr6 (18-267)||(27610099-27610348)
chr6 (43-257)||(26656929-26657143)
chr6 (43-257)||(26762900-26763114)
chr6 (9-267)||(27337065-27337323)
chr6 (9-267)||(27397805-27398063)
chr6 (18-267)||(31285513-31285762)
chr6 (15-254)||(25539510-25539749)
chr6 (15-257)||(25511856-25512097)
chr6 (41-267)||(27697588-27697814)
chr6 (45-268)||(27530307-27530530)
chr6 (18-257)||(27679914-27680153)
chr6 (15-257)||(27426588-27426830)
chr6 (15-267)||(28793313-28793565)
chr6 (15-257)||(26056886-26057128)
chr6 (15-257)||(26076856-26077098)
chr6 (15-257)||(26803410-26803652)
chr6 (41-267)||(26862534-26862760)
chr6 (15-256)||(26824784-26825025)
chr6 (15-267)||(28787192-28787444)
chr6 (41-267)||(26885024-26885250)
chr6 (15-267)||(26624225-26624477)
chr6 (15-267)||(26730202-26730454)
chr6 (108-254)||(27215419-27215565)
chr6 (23-247)||(27603688-27603912)
chr6 (100-267)||(28782055-28782222)
chr6 (15-184)||(27705230-27705399)
chr6 (135-268)||(28326431-28326564)
chr6 (135-268)||(28504067-28504200)
chr6 (108-268)||(28227905-28228065)
chr6 (136-246)||(28240329-28240439)
chr6 (150-255)||(29477176-29477281)
chr6 (135-177)||(25074911-25074953)
chr6 (108-238)||(28243778-28243908)
chr6 (113-182)||(26812567-26812636)
chr6 (135-268)||(28182071-28182204)
chr6 (108-268)||(28235518-28235678)
chr6 (114-198)||(29827009-29827093)
chr6 (139-182)||(27664305-27664348)
chr6 (114-175)||(26950789-26950850)
chr6 (135-175)||(26975997-26976037)
chr6 (135-175)||(31289315-31289355)
chr6 (108-175)||(26938075-26938142)
chr6 (137-175)||(26849758-26849796)
chr6 (216-270)||(27576142-27576196)
chr6 (137-254)||(28490654-28490771)
chr6 (137-254)||(29803064-29803181)
chr6 (135-175)||(26636692-26636732)
chr6 (135-175)||(26742658-26742698)
[»] chr8 (3 HSPs)
chr8 (15-257)||(29272814-29273056)
chr8 (135-246)||(35984274-35984385)
chr8 (135-246)||(31906029-31906140)
[»] scaffold0003 (1 HSPs)
scaffold0003 (15-257)||(60533-60775)
[»] chr4 (8 HSPs)
chr4 (15-257)||(18074725-18074967)
chr4 (15-267)||(18654449-18654701)
chr4 (15-267)||(18678532-18678784)
chr4 (15-267)||(18698372-18698624)
chr4 (15-267)||(18730476-18730728)
chr4 (15-267)||(18723057-18723309)
chr4 (114-267)||(5090025-5090178)
chr4 (15-122)||(18688598-18688705)
[»] scaffold0419 (1 HSPs)
scaffold0419 (15-267)||(8441-8693)
[»] scaffold0277 (2 HSPs)
scaffold0277 (15-267)||(12651-12903)
scaffold0277 (15-267)||(3688-3940)
[»] scaffold0038 (4 HSPs)
scaffold0038 (108-268)||(28403-28563)
scaffold0038 (136-246)||(40491-40601)
scaffold0038 (108-238)||(43940-44070)
scaffold0038 (108-268)||(35680-35840)
[»] chr5 (1 HSPs)
chr5 (117-185)||(16691903-16691971)
[»] chr2 (1 HSPs)
chr2 (114-254)||(17992290-17992430)
[»] scaffold0019 (1 HSPs)
scaffold0019 (108-200)||(57363-57455)
[»] chr3 (3 HSPs)
chr3 (210-266)||(5879638-5879694)
chr3 (210-266)||(5917003-5917059)
chr3 (209-265)||(5982798-5982854)


Alignment Details
Target: chr1 (Bit Score: 222; Significance: 1e-122; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 9 - 270
Target Start/End: Original strand, 28126645 - 28126906
Alignment:
Q  9 acatcatcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatac 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  28126645 acatcatcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttacatacaacccttttaccgcatgcgtac 28126744  T
Q  109 tttctatcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccag 208  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||    
T  28126745 tttctatcccatgacaggttagtaagtgtttctctcgagtggtaatgatgactttgcttccacgaccgaaccaatcaagtcctccagccaaagcctctag 28126844  T
Q  209 ctgctccagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagcctttgtt 270  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||   |||||||||||    
T  28126845 ctgctccagtttgtcgacatcatcaagaatcaaaagaatcttctttctgcatagcctttgtt 28126906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 9 - 270
Target Start/End: Original strand, 28163346 - 28163607
Alignment:
Q  9 acatcatcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatac 108  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||  || ||||||||||||| ||||| ||||||||    
T  28163346 acatcttcataacttgaaggaactttgttatttttaaaagccatccacgtcaacaattcaagcgcttccgtcccatacaacccttctaccgaatgcatac 28163445  T
Q  109 tttctatcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccag 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  28163446 tttctatcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgaccctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccag 28163545  T
Q  209 ctgctccagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagcctttgtt 270  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28163546 ctgctccagtttgtcgacatcatcaagaatcaaaagaattttatttctatgtagcctttgtt 28163607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 41 - 267
Target Start/End: Original strand, 267342 - 267568
Alignment:
Q  41 tttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttctatcccatgacaggttagtaagtgtttg 140  Q
    ||||||||||||||| |||||||||||||| ||||  || ||||||||||||| |||  ||||| |||||||||||||||||||||||||||| || |||    
T  267342 tttaaaagccatccaactcaacaattcaagagcttcggtcccatacaacccttctacttcatgcgtactttctatcccatgacaggttagtaattgcttg 267441  T
Q  141 tctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctccagtttgtcgacatcatcaagaatca 240  Q
    ||||||||||||| || |||||||||||||   ||||||||||| ||||||||||||||||| | ||  || |  |  | ||  |||||||| |||||||    
T  267442 tctcgagtggtaacgacgactctgcttccatagccgaaccaatcaagtcctccagccaaagcatgcaattgttttatatcgttaacatcatcgagaatca 267541  T
Q  241 aaagaattttctttctatgtagccttt 267  Q
    ||||||| |||||||||  ||||||||    
T  267542 aaagaatcttctttctacatagccttt 267568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 267
Target Start/End: Complemental strand, 26136995 - 26136842
Alignment:
Q  114 atcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtc-ctccagccaaagcctccagctgc 212  Q
    ||||||||||| | ||| || ||||||||||| ||||||||||||||||| || ||| |||| | |||| | || | ||||| ||||| ||| || ||||    
T  26136995 atcccatgacatgatagcaaatgtttgtctcgggtggtaatgatgactctactcccaggaccaagccaa-ctaggctctccaaccaaaacctgcaactgc 26136897  T
Q  213 tccagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagccttt 267  Q
    |  || ||||| || ||||| |||||||| | ||||||||||  |||||||||||    
T  26136896 tttagcttgtcaacgtcatcgagaatcaacaaaattttcttttgatgtagccttt 26136842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 146; Significance: 6e-77; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 2518 - 2767
Alignment:
Q  18 taacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttctatcc 117  Q
    |||| ||||||||| |||| |  |||||||||||||||||||||||||||||| |||| ||| ||||||||||||| |||  |||||||||||| |||||    
T  2518 taacctgaaggaacattgtcacttttaaaagccatccacctcaacaattcaagagcttctgtcccatacaacccttctacttcatgcatactttttatcc 2617  T
Q  118 catgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctccag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||  |||||||||||||||| |  || |||| ||     
T  2618 catgacaggttagtaagtgtttgtctcgagtggtaatgatgactttgcttccacggccgaaccaatcaggtcctccagccaaagcatgtagttgcttcat 2717  T
Q  218 tttgtcgacatcatcaagaatcaaaagaattttctttctatgtagccttt 267  Q
     ||||| ||||||||||||||||||||||  |||||||||||||||||||    
T  2718 attgtcaacatcatcaagaatcaaaagaaccttctttctatgtagccttt 2767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 146; Significance: 6e-77; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 27717478 - 27717727
Alignment:
Q  18 taacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttctatcc 117  Q
    |||| ||||||||| |||| |  |||||||||||||||||||||||||||||| |||| ||| ||||||||||||| |||  |||||||||||| |||||    
T  27717478 taacctgaaggaacattgtcacttttaaaagccatccacctcaacaattcaagagcttctgtcccatacaacccttctacttcatgcatactttttatcc 27717577  T
Q  118 catgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctccag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||  |||||||||||||||| |  || |||| ||     
T  27717578 catgacaggttagtaagtgtttgtctcgagtggtaatgatgactttgcttccacggccgaaccaatcaggtcctccagccaaagcatgtagttgcttcat 27717677  T
Q  218 tttgtcgacatcatcaagaatcaaaagaattttctttctatgtagccttt 267  Q
     ||||| ||||||||||||||||||||||  |||||||||||||||||||    
T  27717678 attgtcaacatcatcaagaatcaaaagaaccttctttctatgtagccttt 27717727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 15 - 267
Target Start/End: Original strand, 27591997 - 27592249
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    |||||||||||||||||||| | || |||||||||| ||||||||||||||||||| |||| ||| |||| |||| ||| ||| ||||   |  ||||||    
T  27591997 tcataacttgaaggaactttctcatttttaaaagccttccacctcaacaattcaagagcttctgtcccattcaactcttctactgcatatgttttttcta 27592096  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
    |||||||||||  |||||||||||| ||||| ||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||| || ||||| ||    
T  27592097 tcccatgacagtctagtaagtgtttatctcgggtggtgatgatgactctgcttccaggaccgaaccaatcaagtcctccagccaaagcatctagctgatc 27592196  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagccttt 267  Q
    ||||||||| ||||||||||||||||||||||| ||||||| |||||||||||    
T  27592197 cagtttgtcaacatcatcaagaatcaaaagaatcttctttccatgtagccttt 27592249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 15 - 257
Target Start/End: Complemental strand, 25484265 - 25484023
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    |||||||||||||||||||||| || |||||||||||| | ||||||||||||||| |||| |||  ||| |||  ||| ||| |||||  |||||   |    
T  25484265 tcataacttgaaggaactttgtcatttttaaaagccattcgcctcaacaattcaagagcttctgtctcattcaattcttctactgcatgtgtacttgtaa 25484166  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
    |||||||||||| |||||||||||| || ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||    
T  25484165 tcccatgacaggctagtaagtgtttatcacgagtggtaatgatgactctgcttccatgaccgaaccaatcaagtcctccagccaaagcctctagctgctc 25484066  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttctttcta 257  Q
    ||||||||| |||||||||| |||||||||||| |||||||||    
T  25484065 cagtttgtcaacatcatcaacaatcaaaagaatcttctttcta 25484023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 15 - 257
Target Start/End: Complemental strand, 26144074 - 26143832
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    |||||||||||||||||||||| || |||||||||||| | ||||||||||||||| |||| |||  ||| |||  ||| ||| |||||  |||||   |    
T  26144074 tcataacttgaaggaactttgtcatttttaaaagccattcgcctcaacaattcaagagcttctgtctcattcaattcttctactgcatgtgtacttgtaa 26143975  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
    |||||||||||| |||||||||||| || ||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||| ||||||||    
T  26143974 tcccatgacaggctagtaagtgtttatcacgagtggtaatgatgaccctgcttccatgaccgaaccaatcaagtcctccagccaaagcctctagctgctc 26143875  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttctttcta 257  Q
    ||||||||| ||||||||||||||||||||||| |||||||||    
T  26143874 cagtttgtcaacatcatcaagaatcaaaagaatcttctttcta 26143832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 15 - 267
Target Start/End: Original strand, 27676596 - 27676848
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    |||||||||||||||||||| | || |||||||||| ||||||||||||||||||| |||| |||  ||| |||| ||| ||| ||||   |  ||||||    
T  27676596 tcataacttgaaggaactttctcatttttaaaagccttccacctcaacaattcaagagcttctgtctcattcaactcttctactgcatatgttttttcta 27676695  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
    |||||||||||  |||||||||||| ||||| ||||| |||||||||||||||||| |||| ||||||||||||| ||||||||||||||| ||||| ||    
T  27676696 tcccatgacagtctagtaagtgtttatctcgggtggtgatgatgactctgcttccaggaccaaaccaatcgagtcttccagccaaagcctctagctgatc 27676795  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagccttt 267  Q
    ||||||||| ||||||||||||||||||||||| ||||||| |||||||||||    
T  27676796 cagtttgtcaacatcatcaagaatcaaaagaatcttctttccatgtagccttt 27676848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 15 - 267
Target Start/End: Complemental strand, 26647685 - 26647433
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    ||||||||||  || ||||||||||  ||||| ||||||||||||||||||||||| |||| ||| ||||| | |||| |||| ||||   | |||||||    
T  26647685 tcataacttggcggtactttgttattcttaaacgccatccacctcaacaattcaagagcttctgtcccatatagccctcttactgcatatgttctttcta 26647586  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
    ||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||| ||    
T  26647585 tcccatgacaggttagtaagtgtttatctcgggtggtgatgatgactctgcttccaggaccgaaccaatcaagtcctccagccaaagcctctagctgatc 26647486  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagccttt 267  Q
    ||||| ||  |||||||| |||||||||||||| |||||||||  ||||||||    
T  26647485 cagttggttaacatcatcgagaatcaaaagaatcttctttctacatagccttt 26647433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 15 - 267
Target Start/End: Complemental strand, 26753653 - 26753401
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    ||||||||||  || ||||||||||  ||||| ||||||||||||||||||||||| |||| ||| ||||| | |||| |||| ||||   | |||||||    
T  26753653 tcataacttggcggtactttgttattcttaaacgccatccacctcaacaattcaagagcttctgtcccatatagccctcttactgcatatgttctttcta 26753554  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
    ||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||| ||    
T  26753553 tcccatgacaggttagtaagtgtttatctcgggtggtgatgatgactctgcttccaggaccgaaccaatcaagtcctccagccaaagcctctagctgatc 26753454  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagccttt 267  Q
    ||||| ||  |||||||| |||||||||||||| |||||||||  ||||||||    
T  26753453 cagttggttaacatcatcgagaatcaaaagaatcttctttctacatagccttt 26753401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 15 - 257
Target Start/End: Original strand, 25492295 - 25492537
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    |||||| ||||||||||| ||| || |||||||||||||||| | | ||||||||| |||| |   |||| |||| ||| ||| ||||||||||||||||    
T  25492295 tcataaattgaaggaactctgtcatttttaaaagccatccacataagcaattcaagagcttcttccccatgcaactcttctactgcatgcatactttcta 25492394  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||| |||||||| |||| ||||||||    
T  25492395 tcccatgactggttagtatgtgtttgtctcgagtggtaatgataactccgcttccacgaccgaaccaatcaagtccttcagccaaatcctctagctgctc 25492494  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttctttcta 257  Q
    |||| |||| |||||||| |||||||||||||| |||| ||||    
T  25492495 cagtctgtcaacatcatcgagaatcaaaagaatcttctctcta 25492537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 15 - 257
Target Start/End: Complemental strand, 25580928 - 25580686
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    |||||| ||||||||||||||| || |||||||||||| | ||||||||||||||| |||| |||  ||| |||  ||| ||| |||||  |||||   |    
T  25580928 tcataaattgaaggaactttgtcatttttaaaagccattcgcctcaacaattcaagagcttctgtctcattcaattcttctactgcatgtgtacttgtaa 25580829  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
    |||||||||||| |||||||||||| || ||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||| ||||||||    
T  25580828 tcccatgacaggctagtaagtgtttatcacgagtggtaatgatgacactgcttccatgaccgaaccaatcaagtcctccagccaaagcctctagctgctc 25580729  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttctttcta 257  Q
    ||||||||| |||||||||| |||||||||||| |||||||||    
T  25580728 cagtttgtcaacatcatcaaaaatcaaaagaatcttctttcta 25580686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 27610099 - 27610348
Alignment:
Q  18 taacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttctatcc 117  Q
    |||| ||||||||| |||| |  |||||||||||||||||||||||||||||| |||| ||| ||||||| |||||  ||   ||||||||||| |||||    
T  27610099 taacctgaaggaacattgtcacttttaaaagccatccacctcaacaattcaagagcttctgtcccatacagcccttccactttatgcatactttttatcc 27610198  T
Q  118 catgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctccag 217  Q
    ||||||||||||| ||||||||||||||||||| |||||||||| |||||||||| |||||||||||  |||||||||||||||| |  || |||| ||     
T  27610199 catgacaggttagcaagtgtttgtctcgagtggcaatgatgactttgcttccacggccgaaccaatcaggtcctccagccaaagcatgtagttgcttcat 27610298  T
Q  218 tttgtcgacatcatcaagaatcaaaagaattttctttctatgtagccttt 267  Q
     ||||| ||||||||||||||||||||||  |||||||||||||||||||    
T  27610299 attgtcaacatcatcaagaatcaaaagaaccttctttctatgtagccttt 27610348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 43 - 257
Target Start/End: Complemental strand, 26657143 - 26656929
Alignment:
Q  43 taaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttctatcccatgacaggttagtaagtgtttgtc 142  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||| | ||||||||| ||||   |  |||||||||| |||||| |||| |||||||| ||    
T  26657143 taaaagccatccatctcaacaattcaagtgcttctgtcccatatagcccttttacggcatatgttatttctatcccgtgacagtttagcaagtgtttatc 26657044  T
Q  143 tcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctccagtttgtcgacatcatcaagaatcaaa 242  Q
    || |||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||||| |||||||||    
T  26657043 tctagtggtaatgatgactctgcttccacaaccgaaccaatcaagtcctcctgccaaagcctctagctgctccagtttgtcaacatcatcgagaatcaaa 26656944  T
Q  243 agaattttctttcta 257  Q
    ||||| |||||||||    
T  26656943 agaatcttctttcta 26656929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 43 - 257
Target Start/End: Complemental strand, 26763114 - 26762900
Alignment:
Q  43 taaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttctatcccatgacaggttagtaagtgtttgtc 142  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||| | ||||||||| ||||   |  |||||||||| |||||| |||| |||||||| ||    
T  26763114 taaaagccatccatctcaacaattcaagtgcttctgtcccatatagcccttttacggcatatgttatttctatcccgtgacagtttagcaagtgtttatc 26763015  T
Q  143 tcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctccagtttgtcgacatcatcaagaatcaaa 242  Q
    || |||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||||| |||||||||    
T  26763014 tctagtggtaatgatgactctgcttccacaaccgaaccaatcaagtcctcctgccaaagcctctagctgctccagtttgtcaacatcatcgagaatcaaa 26762915  T
Q  243 agaattttctttcta 257  Q
    ||||| |||||||||    
T  26762914 agaatcttctttcta 26762900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 9 - 267
Target Start/End: Original strand, 27337065 - 27337323
Alignment:
Q  9 acatcatcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatac 108  Q
    ||||| ||||||||||  || ||||||||||  ||||||||| ||||||||||||||||||| ||||   | ||||| | |||| |||| ||||   | |    
T  27337065 acatcttcataacttggcggtactttgttattcttaaaagccgtccacctcaacaattcaagagcttccttcccatatagccctcttactgcatatgttc 27337164  T
Q  109 tttctatcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccag 208  Q
    ||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||    
T  27337165 tttctatcccatgacaggttagtaagtgtttatctcgggtggtgatgatgactctgcttccaggaccgaaccaatcaagtcctccagccaaagcctctag 27337264  T
Q  209 ctgctccagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagccttt 267  Q
    ||| ||||||| ||| |||||||| |||||||||||||| ||||| |||  ||||||||    
T  27337265 ctgatccagttggtcaacatcatcgagaatcaaaagaatcttcttcctacatagccttt 27337323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 9 - 267
Target Start/End: Original strand, 27397805 - 27398063
Alignment:
Q  9 acatcatcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatac 108  Q
    ||||| ||||||||||  || ||||||||||  ||||||||| ||||||||||||||||||| ||||   | ||||| | |||| |||| ||||   | |    
T  27397805 acatcttcataacttggcggtactttgttattcttaaaagccgtccacctcaacaattcaagagcttccttcccatatagccctcttactgcatatgttc 27397904  T
Q  109 tttctatcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccag 208  Q
    ||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||    
T  27397905 tttctatcccatgacaggttagtaagtgtttatctcgggtggtgatgatgactctgcttccaggaccgaaccaatcaagtcctccagccaaagcctctag 27398004  T
Q  209 ctgctccagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagccttt 267  Q
    ||| ||||||| ||| |||||||| |||||||||||||| ||||| |||  ||||||||    
T  27398005 ctgatccagttggtcaacatcatcgagaatcaaaagaatcttcttcctacatagccttt 27398063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 18 - 267
Target Start/End: Complemental strand, 31285762 - 31285513
Alignment:
Q  18 taacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttctatcc 117  Q
    |||| |||||||||||||| |  |||||||||||||||||| ||||||||||| ||||  || |||| |||||||| ||| |||||  |||||| |||||    
T  31285762 taacctgaaggaactttgtcacttttaaaagccatccaccttaacaattcaagagcttcagtcccattcaacccttctactgcatgtgtactttttatcc 31285663  T
Q  118 catgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctccag 217  Q
    ||||||   |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| | ||| || | ||     
T  31285662 catgactacttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacggccgaaccaatcaagtcctccagccaaagcatgcagttgattcat 31285563  T
Q  218 tttgtcgacatcatcaagaatcaaaagaattttctttctatgtagccttt 267  Q
     ||||| |||||||| |||||||||||||| |||||||||  ||||||||    
T  31285562 attgtcaacatcatcgagaatcaaaagaatcttctttctacatagccttt 31285513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 15 - 254
Target Start/End: Complemental strand, 25539749 - 25539510
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    |||||||| ||||||||||||| || |||||| ||||| | ||||||||||||||| |||| |||  ||| ||||||||||||  ||||  |||||   |    
T  25539749 tcataactcgaaggaactttgtcatttttaaacgccattcgcctcaacaattcaagagcttctgtctcattcaacccttttactacatgtgtacttgtaa 25539650  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
    |||||||||||| || ||| ||| | || ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||    
T  25539649 tcccatgacaggctaataaatgtgtatcacgagtggtaatgatgactctgcttccaggaccgaaccaatcaagtcctccagccaaagcctctagctgctc 25539550  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttcttt 254  Q
     |||||||| ||||||||||||||||||||||| ||||||    
T  25539549 tagtttgtcaacatcatcaagaatcaaaagaatcttcttt 25539510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 15 - 257
Target Start/End: Complemental strand, 25512097 - 25511856
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    |||||||||||||||||||||| ||||||||||||||| | |||||||||   ||| |||| | |  ||| |||||||| ||| |||||  |||||   |    
T  25512097 tcataacttgaaggaactttgtcatgtttaaaagccattcgcctcaacaaaataagagcttctatctcattcaacccttctactgcatgtgtacttgtaa 25511998  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
    ||| |||||||| |||||||||||| || ||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||| ||||||||    
T  25511997 tcc-atgacaggctagtaagtgtttatcacgagtggtaatgatgactctgcttccaggaccgaaccagtcaagtcctccagccaaagcctctagctgctc 25511899  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttctttcta 257  Q
    ||||||||| ||||| ||||||||||||||||| |||||||||    
T  25511898 cagtttgtcaacatcgtcaagaatcaaaagaatcttctttcta 25511856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 41 - 267
Target Start/End: Original strand, 27697588 - 27697814
Alignment:
Q  41 tttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttctatcccatgacaggttagtaagtgtttg 140  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| |||||||||||| |||| | |  ||||||||||||||  |  ||||||||||||     
T  27697588 tttaaaagccatccacctcaacaattcaagagcttctgtcccattcaacccttttactgcatacgttttttctatcccatgatggtctagtaagtgttta 27697687  T
Q  141 tctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctccagtttgtcgacatcatcaagaatca 240  Q
    ||||| ||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||  ||||| ||||||||||| ||||| || |||||||    
T  27697688 tctcgggtggtgatgatgactctgcttccaggaccaaaccaatcgagtcctccagccaaagcctgtagctgatccagtttgtcaacatcgtcgagaatca 27697787  T
Q  241 aaagaattttctttctatgtagccttt 267  Q
    ||||||| |||||||||  ||||||||    
T  27697788 aaagaatcttctttctacatagccttt 27697814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 45 - 268
Target Start/End: Original strand, 27530307 - 27530530
Alignment:
Q  45 aaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttctatcccatgacaggttagtaagtgtttgtctc 144  Q
    ||||||||||||||||||||||| || |||| |||  ||| |||||||| ||| |||||  |||||||||||||||||    ||||||||||||||| ||    
T  27530307 aaagccatccacctcaacaattcgagagcttctgtcgcattcaacccttctactgcatgtgtactttctatcccatgaatctttagtaagtgtttgtttc 27530406  T
Q  145 gagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctccagtttgtcgacatcatcaagaatcaaaag 244  Q
    |||| |||||||||||||| || ||| ||||||||||||| |||||||||||||| ||||| ||||| ||||||||||| ||||||||||||||||||||    
T  27530407 gagtagtaatgatgactctactcccaggaccgaaccaatcaagtcctccagccaaggcctctagctgatccagtttgtcaacatcatcaagaatcaaaag 27530506  T
Q  245 aattttctttctatgtagcctttg 268  Q
    ||| |||||||||  |||||||||    
T  27530507 aatcttctttctacatagcctttg 27530530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 18 - 257
Target Start/End: Complemental strand, 27680153 - 27679914
Alignment:
Q  18 taacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttctatcc 117  Q
    |||| |||||||||||| | |  |||||||||||||||||||||||||||||| |||| |||  ||| |||||||| ||| |||||  |||||||||| |    
T  27680153 taacctgaaggaactttatcacttttaaaagccatccacctcaacaattcaagagcttctgtctcattcaacccttctactgcatgtgtactttctatgc 27680054  T
Q  118 catgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctccag 217  Q
    |||||| | ||||||||| ||||| |||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||| | ||| |||| ||     
T  27680053 catgactgcttagtaagtctttgtttcgagtggtaatgatgactctgcttccacatccgaaccaatcaagtcctccagccaaagcatgcagttgcttcaa 27679954  T
Q  218 tttgtcgacatcatcaagaatcaaaagaattttctttcta 257  Q
     ||||| |||||||| |||||||||||||| |||||||||    
T  27679953 attgtcaacatcatcgagaatcaaaagaatcttctttcta 27679914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 15 - 257
Target Start/End: Original strand, 27426588 - 27426830
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||| |||| |||  ||| |||||||||||| ||||   |  ||||||    
T  27426588 tcataacttgaaggaactttgtcatttttaaaagccatccacctcaacaattcaagagcttctgtcacattcaacccttttactgcatatgttttttcta 27426687  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
    || ||||||||| |||||||||||| ||||| ||||| |||||||||| ||||||| ||||||||||||| | ||||||||||||||| | ||| ||||     
T  27426688 tctcatgacaggctagtaagtgtttatctcgggtggtgatgatgactcggcttccaggaccgaaccaatcaactcctccagccaaagcattcagttgctt 27426787  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttctttcta 257  Q
    ||  ||||| || ||||| |||||||||||||| |||||||||    
T  27426788 catattgtcaacgtcatcgagaatcaaaagaatcttctttcta 27426830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 15 - 267
Target Start/End: Complemental strand, 28793565 - 28793313
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    |||||||||||||| ||||||||||  |||||||||||||| |||||||| ||||| |||| ||| ||||||| |||||| ||  ||||  |||||||||    
T  28793565 tcataacttgaaggtactttgttattcttaaaagccatccatctcaacaactcaagagcttctgtcccatacagccctttcacttcatgtgtactttcta 28793466  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
    |||||||||   |||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||  ||||||| |||||||| |  || ||||     
T  28793465 tcccatgacttcttagtaagtgtttgtctcgagtcgtaatgatgaccctgcttccacggccgaaccaatcaggtcctcctgccaaagcatgtagttgctt 28793366  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagccttt 267  Q
    ||  | ||| |||||||| |||||||||||||| |||||| ||||||||||||    
T  28793365 catatcgtcaacatcatcgagaatcaaaagaatcttctttgtatgtagccttt 28793313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 15 - 257
Target Start/End: Complemental strand, 26057128 - 26056886
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    |||||||||||||||||||||| || |||||||||  | |  ||||| |||||||| |||| |||  ||| |||||||| ||| |||||  |||||        
T  26057128 tcataacttgaaggaactttgtcatttttaaaagcatttcggctcaataattcaagagcttctgtctcattcaacccttctactgcatgtgtacttgtat 26057029  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
    || ||||| ||| ||||||| |||| || ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| || ||||||||    
T  26057028 tcacatgataggctagtaagcgtttatcacgagtggtaatgatgactctgcttccaagaccgaaccaatcaagtcctccagccaaagcgtctagctgctc 26056929  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttctttcta 257  Q
    ||||||||| ||||| ||||||||||||||||| |||||||||    
T  26056928 cagtttgtcaacatcgtcaagaatcaaaagaatcttctttcta 26056886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 15 - 257
Target Start/End: Complemental strand, 26077098 - 26076856
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    |||||||||||||||||||||| || |||||||||  | |  ||||| |||||||| |||| |||  ||| |||||||| ||| |||||  |||||        
T  26077098 tcataacttgaaggaactttgtcatttttaaaagcatttcggctcaataattcaagagcttctgtctcattcaacccttctactgcatgtgtacttgtat 26076999  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
    || ||||| ||| ||||||| |||| || ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| || ||||||||    
T  26076998 tcacatgataggctagtaagcgtttatcacgagtggtaatgatgactctgcttccaagaccgaaccaatcaagtcctccagccaaagcgtctagctgctc 26076899  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttctttcta 257  Q
    ||||||||| ||||| ||||||||||||||||| |||||||||    
T  26076898 cagtttgtcaacatcgtcaagaatcaaaagaatcttctttcta 26076856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 15 - 257
Target Start/End: Complemental strand, 26803652 - 26803410
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||| ||| ||||||||||| | ||| ||||   | |||||||    
T  26803652 tcataacttgaaggtactttgttatttttaaaagccatccacctcaacaattcaagagcttctgtcccatacaacccctctactgcatatgttctttcta 26803553  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
    |  |||||| ||| ||||| |||||||||||||||||||||||||| ||||||||| | || ||||||||  |||||||||||||||| |  || |||||    
T  26803552 tatcatgactggtcagtaaatgtttgtctcgagtggtaatgatgaccctgcttccatggccaaaccaatcaggtcctccagccaaagcatgtagttgctc 26803453  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttctttcta 257  Q
    ||  | ||| |||||||| |||||||||||||| || ||||||    
T  26803452 catatcgtcaacatcatcgagaatcaaaagaatcttatttcta 26803410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 41 - 267
Target Start/End: Complemental strand, 26862760 - 26862534
Alignment:
Q  41 tttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttctatcccatgacaggttagtaagtgtttg 140  Q
    |||||||||||||||||||||||||||||  |||| |||  |||  | ||| ||||||||||   | |||||||||||||| || ||||||||||||||     
T  26862760 tttaaaagccatccacctcaacaattcaaaagcttctgtctcatgtagcccgtttaccgcatatgttctttctatcccatggcatgttagtaagtgttta 26862661  T
Q  141 tctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctccagtttgtcgacatcatcaagaatca 240  Q
    ||||||||||||||||||||||| |||||| |||| |||||||| ||||||||||| || ||||| ||||| ||||||||||| |||||||| |||||||    
T  26862660 tctcgagtggtaatgatgactctacttccatgaccaaaccaatcaagtcctccagctaatgcctctagctgttccagtttgtcaacatcatcgagaatca 26862561  T
Q  241 aaagaattttctttctatgtagccttt 267  Q
    ||||||| ||| |||||| ||| ||||    
T  26862560 aaagaatcttcattctatttagtcttt 26862534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 15 - 256
Target Start/End: Complemental strand, 26825025 - 26824784
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    ||||||||||| || |||||||||| |||||||||||||||||| ||||||||||| |||| ||| ||||||||||||| |||  ||| |||   |||||    
T  26825025 tcataacttgacggtactttgttatttttaaaagccatccaccttaacaattcaagagcttctgtcccatacaacccttctacttcatacattaattcta 26824926  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
    || |||||  ||| ||||| |||||||||||||| ||||||||||||||||| |||  |||||||||||| | ||||||||||||||| || || |||||    
T  26824925 tctcatgattggtaagtaattgtttgtctcgagttgtaatgatgactctgctgccattaccgaaccaatcaaatcctccagccaaagcatctagttgctc 26824826  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttctttct 256  Q
    ||||||||| |  ||||| ||||||| ||||| |||||||||    
T  26824825 cagtttgtcaatgtcatcgagaatcagaagaactttctttct 26824784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 15 - 267
Target Start/End: Complemental strand, 28787444 - 28787192
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    |||||||||||||| ||||||||||  |||||||||||||| |||||||| ||||| |||| ||| ||||||| |||||| ||  ||||  |||||||||    
T  28787444 tcataacttgaaggtactttgttattcttaaaagccatccatctcaacaactcaagagcttctgtcccatacagccctttcacttcatgtgtactttcta 28787345  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
    |||||||||   |||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||  ||||||| |||||||| |  || ||||     
T  28787344 tcccatgacttcttagtaagtgtttgtctcgagtcgtaatgatgaccctgcttccacggccgaaccaatcaggtcctcctgccaaagcatgtagttgctt 28787245  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagccttt 267  Q
    ||  | ||| |||||||| |||||||||||| | |||||| |||| |||||||    
T  28787244 catatcgtcaacatcatcgagaatcaaaagagtcttctttgtatgcagccttt 28787192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 41 - 267
Target Start/End: Complemental strand, 26885250 - 26885024
Alignment:
Q  41 tttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttctatcccatgacaggttagtaagtgtttg 140  Q
    |||||| |||| |||||||||||||||||  |||| | | ||||| | ||||| |||  |||   | || |||| || ||| || ||||||||||||||     
T  26885250 tttaaaggccagccacctcaacaattcaaaagcttctttcccatatatcccttctacttcatatgttctatctaccctatggcacgttagtaagtgttta 26885151  T
Q  141 tctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctccagtttgtcgacatcatcaagaatca 240  Q
    || ||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||| |||||||||| |||||| ||||||||||||||||    
T  26885150 tcacgagtggtaatgatgaccctgcttccacgaccaaaccaatcaagtcctccagccaaagcctctagctgctccattttgtcaacatcatcaagaatca 26885051  T
Q  241 aaagaattttctttctatgtagccttt 267  Q
    ||||||| |||||||||||||| ||||    
T  26885050 aaagaatcttctttctatgtagtcttt 26885024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 15 - 267
Target Start/End: Complemental strand, 26624477 - 26624225
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    ||||||| |||||||||||||| |  |||||||||||||||||||||||||||| |  | | ||| ||||||||||||| ||| |||||  | |||| ||    
T  26624477 tcataacctgaaggaactttgtcacttttaaaagccatccacctcaacaattcatgaccgtctgtcccatacaacccttctactgcatgtgtgcttttta 26624378  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
    ||||||||  | |||||| |||||||| |||||||||||| ||||| ||||||||||| ||||||||||| || |||||||||||||| ||||| |||      
T  26624377 tcccatgagtgcttagtaggtgtttgtttcgagtggtaattatgaccctgcttccacgtccgaaccaatcaagccctccagccaaagcatccagttgcct 26624278  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagccttt 267  Q
     |   |||| |||||||| |||||||||||||| |||||||||  ||||||||    
T  26624277 tatactgtctacatcatcgagaatcaaaagaatcttctttctacatagccttt 26624225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 15 - 267
Target Start/End: Complemental strand, 26730454 - 26730202
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    ||||||| |||||||||||||| |  |||||||||||||||||||||||||||| |  | | ||| ||||||||||||| ||| |||||  | |||| ||    
T  26730454 tcataacctgaaggaactttgtcacttttaaaagccatccacctcaacaattcatgaccgtctgtcccatacaacccttctactgcatgtgtgcttttta 26730355  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
    ||||||||  | |||||| |||||||| |||||||||||| ||||| ||||||||||| ||||||||||| || |||||||||||||| ||||| |||      
T  26730354 tcccatgagtgcttagtaggtgtttgtttcgagtggtaattatgaccctgcttccacgtccgaaccaatcaagccctccagccaaagcatccagttgcct 26730255  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagccttt 267  Q
     |   |||| |||||||| |||||||||||||| |||||||||  ||||||||    
T  26730254 tatactgtctacatcatcgagaatcaaaagaatcttctttctacatagccttt 26730202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 108 - 254
Target Start/End: Complemental strand, 27215565 - 27215419
Alignment:
Q  108 ctttctatcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctcca 207  Q
    ||||||||||||||| |||||||||| ||| ||| |||||| |||||||||||||| ||||||| ||| |||||||| |||||||||||||||||||| |    
T  27215565 ctttctatcccatgataggttagtaactgtctgtttcgagtcgtaatgatgactctacttccaccaccaaaccaatcaagtcctccagccaaagcctcta 27215466  T
Q  208 gctgctccagtttgtcgacatcatcaagaatcaaaagaattttcttt 254  Q
    ||||||| |||||||| ||||||||||||||||||||||| ||||||    
T  27215465 gctgctctagtttgtcaacatcatcaagaatcaaaagaatcttcttt 27215419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 23 - 247
Target Start/End: Original strand, 27603688 - 27603912
Alignment:
Q  23 tgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttctatcccatga 122  Q
    |||||| ||||||||||  ||||||||||||||||||||||||||||| |||| ||| | | ||||||||| ||  |||| | | ||||||||  |||||    
T  27603688 tgaaggtactttgttattcttaaaagccatccacctcaacaattcaagagcttctgtcctacacaacccttctaatgcatactttctttctatatcatga 27603787  T
Q  123 caggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctccagtttgt 222  Q
    | ||||||||||||| |||||||||||||||||||||| ||||||||| | || ||||||||  || |||| ||||||||||  || ||| |||  | ||    
T  27603788 ctggttagtaagtgtctgtctcgagtggtaatgatgaccctgcttccaagcccaaaccaatcaggttctcctgccaaagcctgtagttgccccatatcgt 27603887  T
Q  223 cgacatcatcaagaatcaaaagaat 247  Q
    | |||||||| ||||||||||||||    
T  27603888 caacatcatcgagaatcaaaagaat 27603912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 100 - 267
Target Start/End: Complemental strand, 28782222 - 28782055
Alignment:
Q  100 catgcatactttctatcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaa 199  Q
    ||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||| |||||    
T  28782222 catgcgtactttctatcccatgacttcttagtaagtgtttgtctcgagtggtaatgatgaccctgcttccacggccgaaccaatcaggtcctcctgccaa 28782123  T
Q  200 agcctccagctgctccagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagccttt 267  Q
    ||| |  || |||||||  | ||| |||||||| |||||||||||| | |||||| |||| |||||||    
T  28782122 agcatgtagttgctccatatcgtcaacatcatcgagaatcaaaagagtcttctttgtatgcagccttt 28782055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 184
Target Start/End: Original strand, 27705230 - 27705399
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    ||||||| ||||||||| |||| || |||||||||||||||||||||||||||||| || | | | |||| |||||||| ||| | ||   |  ||||||    
T  27705230 tcataacctgaaggaacgttgtcatttttaaaagccatccacctcaacaattcaagagcatctatcccattcaacccttctactggatatgttttttcta 27705329  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatc 184  Q
    ||| |||| ||| |||||||||||| | ||||||||| ||||| |||||||||||| | || ||||||||    
T  27705330 tcctatgagaggctagtaagtgtttatttcgagtggtgatgataactctgcttccagggccaaaccaatc 27705399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 268
Target Start/End: Complemental strand, 28326564 - 28326431
Alignment:
Q  135 tgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctccagtttgtcgacatcatcaa 234  Q
    ||||||||||||||||||| ||| ||||| || ||| ||||||||||||| ||||||||||||||| ||| ||  |||| ||||| ||  |||||||| |    
T  28326564 tgtttgtctcgagtggtaacgatcactctactgccaggaccgaaccaatcaagtcctccagccaaaacctgcaattgcttcagttcgtgaacatcatcga 28326465  T
Q  235 gaatcaaaagaattttctttctatgtagcctttg 268  Q
    ||||||| ||||  |||||||  || ||||||||    
T  28326464 gaatcaacagaaccttctttcggtgaagcctttg 28326431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 268
Target Start/End: Complemental strand, 28504200 - 28504067
Alignment:
Q  135 tgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctccagtttgtcgacatcatcaa 234  Q
    ||||||||||||||||||| ||| ||||| || ||| ||||||||||||| ||||||||||||||| ||| ||  |||| ||||| ||  |||||||| |    
T  28504200 tgtttgtctcgagtggtaacgatcactctactgccaggaccgaaccaatcaagtcctccagccaaaacctgcaattgcttcagttcgtgaacatcatcga 28504101  T
Q  235 gaatcaaaagaattttctttctatgtagcctttg 268  Q
    ||||||| ||||  |||||||  || ||||||||    
T  28504100 gaatcaacagaaccttctttcggtgaagcctttg 28504067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 268
Target Start/End: Complemental strand, 28228065 - 28227905
Alignment:
Q  108 ctttctatcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctcca 207  Q
    ||||| ||||||||||  | ||| || ||||||| ||||||||||||||| ||| | |||||| |||| |||||||| ||||||||||||||| ||  ||    
T  28228065 ctttcaatcccatgacttgctagcaattgtttgtttcgagtggtaatgatcactttacttccaggaccaaaccaatcaagtcctccagccaaaacccgca 28227966  T
Q  208 gctgctccagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagcctttg 268  Q
      ||||  |||||||  |||||||| |||||||| |||| ||||||||  || ||||||||    
T  28227965 attgctttagtttgtgaacatcatcgagaatcaatagaactttctttcggtgaagcctttg 28227905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 136 - 246
Target Start/End: Complemental strand, 28240439 - 28240329
Alignment:
Q  136 gtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctccagtttgtcgacatcatcaag 235  Q
    |||||||||||||||||||||||||||||||  || ||| ||||||||| || |||||||||||| ||| ||| |||| |||||  || | || ||| ||    
T  28240439 gtttgtctcgagtggtaatgatgactctgctgtcaggactgaaccaatcaagccctccagccaaaccctgcagttgcttcagttcatccatattatctag 28240340  T
Q  236 aatcaaaagaa 246  Q
    |||||||||||    
T  28240339 aatcaaaagaa 28240329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 255
Target Start/End: Original strand, 29477176 - 29477281
Alignment:
Q  150 gtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctccagtttgtcgacatcatcaagaatcaaaagaattt 249  Q
    |||||||  |||||||| ||| |||| |||||||| ||||||||||||||||||||||  ||||| ||| |||| |||||||| || || | ||||| ||    
T  29477176 gtaatgacaactctgctaccaggaccaaaccaatcaagtcctccagccaaagcctccatttgctctagtctgtccacatcatctaggatgagaagaactt 29477275  T
Q  250 tctttc 255  Q
    ||||||    
T  29477276 tctttc 29477281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 25074953 - 25074911
Alignment:
Q  135 tgtttgtctcgagtggtaatgatgactctgcttccacgaccga 177  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  25074953 tgtttgtctcgagtggtaatgatgactctgctgccacgaccga 25074911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 238
Target Start/End: Complemental strand, 28243908 - 28243778
Alignment:
Q  108 ctttctatcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctcca 207  Q
    ||||| ||||||||||   |||| || ||| ||||||||||||||| ||| ||||| || ||| ||||||||||||| ||||||||||| ||| ||| ||    
T  28243908 ctttcaatcccatgactttttagcaaatgtctgtctcgagtggtaacgatcactctactaccaggaccgaaccaatcaagtcctccagctaaaacctgca 28243809  T
Q  208 gctgctccagtttgtcgacatcatcaagaat 238  Q
      |||| ||||| ||  |||||||| |||||    
T  28243808 attgcttcagttcgtgaacatcatcgagaat 28243778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 182
Target Start/End: Complemental strand, 26812636 - 26812567
Alignment:
Q  113 tatcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaa 182  Q
    |||||||||||| | ||| || ||| ||||||||||||||||||||||||| |||||| |||||| ||||    
T  26812636 tatcccatgacatgatagcaaatgtctgtctcgagtggtaatgatgactctacttccaggaccgagccaa 26812567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 268
Target Start/End: Complemental strand, 28182204 - 28182071
Alignment:
Q  135 tgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctccagtttgtcgacatcatcaa 234  Q
    |||| |||||||||||||||||| ||| | || ||| |||| |||||||| | ||||||||||||| ||| ||  |||| ||||| ||  |||||||| |    
T  28182204 tgttcgtctcgagtggtaatgatcactttactaccaggaccaaaccaatcaattcctccagccaaaacctgcaattgcttcagttcgtgaacatcatcta 28182105  T
Q  235 gaatcaaaagaattttctttctatgtagcctttg 268  Q
    ||||||| ||||  |||||||  || ||||||||    
T  28182104 gaatcaatagaaccttctttcggtgaagcctttg 28182071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 268
Target Start/End: Complemental strand, 28235678 - 28235518
Alignment:
Q  108 ctttctatcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctcca 207  Q
    ||||| ||||||||||  | ||| || ||||||||||||||||||||||| ||| | |||||| |||| |||||||| | | |||| |||||| ||| ||    
T  28235678 ctttcaatcccatgacttgctagcaattgtttgtctcgagtggtaatgatcactttacttccaggaccaaaccaatcaatttctcccgccaaaacctgca 28235579  T
Q  208 gctgctccagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagcctttg 268  Q
      ||||  |||| ||  |||||||| |||||||| ||||  |||||||  || ||||||||    
T  28235578 attgctttagttcgtgaacatcatctagaatcaacagaaccttctttcggtgaagcctttg 28235518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 29827093 - 29827009
Alignment:
Q  114 atcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagcca 198  Q
    ||||||||||  ||||| || |||| |||||||||||||||||| ||| |||| ||| |||| |||||||| |||||||| ||||    
T  29827093 atcccatgacttgttagcaaatgttggtctcgagtggtaatgatcactatgctgccaggaccaaaccaatcaagtcctcccgcca 29827009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 27664305 - 27664348
Alignment:
Q  139 tgtctcgagtggtaatgatgactctgcttccacgaccgaaccaa 182  Q
    |||||||||||||||||||||||||||||||  |||||||||||    
T  27664305 tgtctcgagtggtaatgatgactctgcttccttgaccgaaccaa 27664348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 175
Target Start/End: Complemental strand, 26950850 - 26950789
Alignment:
Q  114 atcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgacc 175  Q
    ||||||||||| | ||  || |||||||| ||||||||||||||||||||||| ||||||||    
T  26950850 atcccatgacatgataacaaatgtttgtcacgagtggtaatgatgactctgctgccacgacc 26950789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 26976037 - 26975997
Alignment:
Q  135 tgtttgtctcgagtggtaatgatgactctgcttccacgacc 175  Q
    |||||||||||||||||||||||||||||||| ||| ||||    
T  26976037 tgtttgtctcgagtggtaatgatgactctgctgccatgacc 26975997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 31289355 - 31289315
Alignment:
Q  135 tgtttgtctcgagtggtaatgatgactctgcttccacgacc 175  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  31289355 tgtttgtctcaagtggtaatgatgactctgcttccaggacc 31289315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 175
Target Start/End: Complemental strand, 26938142 - 26938075
Alignment:
Q  108 ctttctatcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgacc 175  Q
    ||||| ||||||||||| | ||| || |||||||||||||||||||  |||||| |||||||| ||||    
T  26938142 ctttcaatcccatgacatgatagcaaatgtttgtctcgagtggtaacaatgactttgcttccatgacc 26938075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 26849796 - 26849758
Alignment:
Q  137 tttgtctcgagtggtaatgatgactctgcttccacgacc 175  Q
    |||||||||||||||||||||||||||||| ||| ||||    
T  26849796 tttgtctcgagtggtaatgatgactctgctaccatgacc 26849758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 27576142 - 27576196
Alignment:
Q  216 agtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagcctttgtt 270  Q
    |||||||| |||||||| |||||||| | || ||||||| |||||||||||||||    
T  27576142 agtttgtcaacatcatcgagaatcaacaaaactttctttgtatgtagcctttgtt 27576196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 254
Target Start/End: Original strand, 28490654 - 28490771
Alignment:
Q  137 tttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctccagtttgtcgacatcatcaaga 236  Q
    |||||| ||||| |||||||||||||| |||||  |||| |||||| ||  || |||||| |  ||||| |  |||||||  ||||| |||||||| |||    
T  28490654 tttgtcccgagtcgtaatgatgactctacttcctggaccaaaccaaacggatcttccagcaatggcctctaattgctccaaattgtcaacatcatctaga 28490753  T
Q  237 atcaaaagaattttcttt 254  Q
    | ||||||||| ||||||    
T  28490754 agcaaaagaatcttcttt 28490771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 254
Target Start/End: Original strand, 29803064 - 29803181
Alignment:
Q  137 tttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctccagtttgtcgacatcatcaaga 236  Q
    |||||| ||||| |||||||||||||| |||||  |||| |||||| ||  || |||||| |  ||||| |  |||||||  ||||| |||||||| |||    
T  29803064 tttgtcccgagtcgtaatgatgactctacttcctggaccaaaccaaacggatcttccagcaatggcctctaattgctccaaattgtcaacatcatctaga 29803163  T
Q  237 atcaaaagaattttcttt 254  Q
    | ||||||||| ||||||    
T  29803164 agcaaaagaatcttcttt 29803181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 26636732 - 26636692
Alignment:
Q  135 tgtttgtctcgagtggtaatgatgactctgcttccacgacc 175  Q
    ||||||||||||||||| ||||| |||||||| ||||||||    
T  26636732 tgtttgtctcgagtggtgatgattactctgctgccacgacc 26636692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 26742698 - 26742658
Alignment:
Q  135 tgtttgtctcgagtggtaatgatgactctgcttccacgacc 175  Q
    ||||||||||||||||| ||||| |||||||| ||||||||    
T  26742698 tgtttgtctcgagtggtgatgattactctgctgccacgacc 26742658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 131; Significance: 5e-68; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 15 - 257
Target Start/End: Original strand, 29272814 - 29273056
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    |||||| ||||||| ||||||||||  ||||||||||||||||||||||||||||| |||||||| ||||||| ||||| |||  |||||||||||| ||    
T  29272814 tcataaattgaaggtactttgttattcttaaaagccatccacctcaacaattcaagagcttttgtcccatacagcccttctacttcatgcatacttttta 29272913  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
    |||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||| |||||||||||  |||||||||||||||| |  || ||||     
T  29272914 tcccatgacaagttagcaagtgtttgtctcgagtagtaatgatgactttgcttccacggccgaaccaatcatgtcctccagccaaagcatgtagttgctt 29273013  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttctttcta 257  Q
    ||  || || |||||||| ||||||||||||||||||||||||    
T  29273014 caaattatcaacatcatcgagaatcaaaagaattttctttcta 29273056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 246
Target Start/End: Complemental strand, 35984385 - 35984274
Alignment:
Q  135 tgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctccagtttgtcgacatcatcaa 234  Q
    |||||||| ||||| |||||||| |||||||| |||  ||| | |||||| |  |||||| |||| ||||| ||||| || | |||||| |||||||| |    
T  35984385 tgtttgtcccgagttgtaatgataactctgctgccagaaccaagccaatcaaaccctccaaccaaggcctctagctgttctattttgtcaacatcatcta 35984286  T
Q  235 gaatcaaaagaa 246  Q
    ||||||||||||    
T  35984285 gaatcaaaagaa 35984274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 246
Target Start/End: Complemental strand, 31906140 - 31906029
Alignment:
Q  135 tgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctccagtttgtcgacatcatcaa 234  Q
    |||||||| | ||| ||||| || ||||||||||||  ||| | ||||| || ||||||| |||| |||||||| || || | ||| || |||||||| |    
T  31906140 tgtttgtccctagttgtaataataactctgcttccagaaccaagccaatagaatcctccaaccaaggcctccagttgttctattttatcaacatcatcta 31906041  T
Q  235 gaatcaaaagaa 246  Q
    ||||||||||||    
T  31906040 gaatcaaaagaa 31906029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 15 - 257
Target Start/End: Complemental strand, 60775 - 60533
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||| |||| |||  ||| |||||||||||| ||||   |  ||||||    
T  60775 tcataacttgaaggaactttgtcatttttaaaagccatccacctcaacaattcaagagcttctgtcacattcaacccttttactgcatatgttttttcta 60676  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
    || ||||||||| |||||||||||| ||||| ||||| |||||||||| ||||||| ||||||||||||| | ||||||||||||||| | ||| ||||     
T  60675 tctcatgacaggctagtaagtgtttatctcgggtggtgatgatgactcggcttccaggaccgaaccaatcaactcctccagccaaagcattcagttgctt 60576  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttctttcta 257  Q
    ||  ||||| || ||||| |||||||||||||| |||||||||    
T  60575 catattgtcaacgtcatcgagaatcaaaagaatcttctttcta 60533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 2e-58; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 15 - 257
Target Start/End: Complemental strand, 18074967 - 18074725
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||| |||| |||  ||| |||||||||||| ||||   |  ||||||    
T  18074967 tcataacttgaaggaactttgtcatttttaaaagccatccacctcaacaattcaagagcttctgtcacattcaacccttttactgcatatgttttttcta 18074868  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
    || ||||||||| |||||||||||| ||||| ||||| |||||||||| ||||||| ||||||||||||| | ||||||||||||||| | ||| ||||     
T  18074867 tctcatgacaggctagtaagtgtttatctcgggtggtgatgatgactcggcttccaggaccgaaccaatcaactcctccagccaaagcattcagttgctt 18074768  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttctttcta 257  Q
    ||  ||||| || ||||| |||||||||||||| |||||||||    
T  18074767 catattgtcaacgtcatcgagaatcaaaagaatcttctttcta 18074725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 15 - 267
Target Start/End: Original strand, 18654449 - 18654701
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    |||||||||||||||||||||| |  |||||||||||||||||||||||||||||| || |||     | ||| |||||||||  |||||||| ||||||    
T  18654449 tcataacttgaaggaactttgtaaattttaaaagccatccacctcaacaattcaagagcattttccgtagacatcccttttacttcatgcataatttcta 18654548  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
    || |||||  | |||||||||||||||  |||||||||||||| ||||||||||||| ||||||||||||  |||||||||||||||| | |||  | ||    
T  18654549 tctcatgattgcttagtaagtgtttgttacgagtggtaatgataactctgcttccacaaccgaaccaatcacgtcctccagccaaagcatgcagtggttc 18654648  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagccttt 267  Q
    ||  ||||| |||||||| |||||||||||||| |||||| ||||||||||||    
T  18654649 caaattgtccacatcatcgagaatcaaaagaatcttctttgtatgtagccttt 18654701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 15 - 267
Target Start/End: Original strand, 18678532 - 18678784
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    |||||||||||||||||||||| |  |||||||||||||||||||||||||||||| || |||   | | ||| |||||||||  |||||||| ||||||    
T  18678532 tcataacttgaaggaactttgtaacttttaaaagccatccacctcaacaattcaagagcattttccctagacatcccttttacttcatgcataatttcta 18678631  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
    || |||||  | |||||||||||||||  |||||||||||||| ||||||||||||| ||||||||||||  ||||||| |||||||| | ||| || ||    
T  18678632 tctcatgattgcttagtaagtgtttgttacgagtggtaatgataactctgcttccacaaccgaaccaatcacgtcctccggccaaagcatgcagttgttc 18678731  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagccttt 267  Q
    ||  ||||  |||||||| |||||||||||||| |||||| ||||||||||||    
T  18678732 caaattgtgcacatcatcgagaatcaaaagaatcttctttgtatgtagccttt 18678784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 15 - 267
Target Start/End: Original strand, 18698372 - 18698624
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||| || |||     | ||| |||||||||  |||| ||| ||||||    
T  18698372 tcataacttgaaggaactttgtaatttttaaaagccatccacctcaacaattcaagagcattttccgtagacatcccttttacttcatggataatttcta 18698471  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
    || |||||  |||||||||||||||||  |||||||||||||| |||||||||||||  |||||||||||  |||||||||||||||| | ||| || ||    
T  18698472 tctcatgattggttagtaagtgtttgttacgagtggtaatgataactctgcttccacagccgaaccaatcacgtcctccagccaaagcatgcagttgttc 18698571  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagccttt 267  Q
    ||  ||||| |||||||| |||||||||||||| |||||| |||| |||||||    
T  18698572 caaattgtcaacatcatcgagaatcaaaagaatcttctttgtatgcagccttt 18698624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 15 - 267
Target Start/End: Original strand, 18730476 - 18730728
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||| || |||     | ||| |||||||||  |||| ||| ||||||    
T  18730476 tcataacttgaaggaactttgtaatttttaaaagccatccacctcaacaattcaagagcattttccgtagacatcccttttacttcatggataatttcta 18730575  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
    || |||||  |||||||||||||||||  |||||||||||||| ||| |||||||||  |||||||||||  |||||||||||||||| | ||| || ||    
T  18730576 tctcatgattggttagtaagtgtttgttacgagtggtaatgataactatgcttccacagccgaaccaatcacgtcctccagccaaagcatgcagttgttc 18730675  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagccttt 267  Q
    ||  ||||| |||||||| |||||||||||||| |||||| ||||||||||||    
T  18730676 caaattgtcaacatcatcgagaatcaaaagaatcttctttgtatgtagccttt 18730728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 15 - 267
Target Start/End: Original strand, 18723057 - 18723309
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    |||||||||||||||||||||| |  |||||||||||||||||||||||||||||| || |||     | ||| |||||||||  |||||||| ||||||    
T  18723057 tcataacttgaaggaactttgtaacttttaaaagccatccacctcaacaattcaagagcattttccgtagacatcccttttacttcatgcataatttcta 18723156  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
     | |||||  ||||||||| |||||||  |||||||||||||| ||||||||||||   |||||||||||  |||||||||||||||| | ||| || |     
T  18723157 cctcatgattggttagtaattgtttgttacgagtggtaatgataactctgcttccagagccgaaccaatcaggtcctccagccaaagcatgcagttgttt 18723256  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagccttt 267  Q
    ||  ||||| |||||||| |||||||||||||| |||||| ||||||||||||    
T  18723257 caaattgtcaacatcatcgagaatcaaaagaatcttctttgtatgtagccttt 18723309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 114 - 267
Target Start/End: Original strand, 5090025 - 5090178
Alignment:
Q  114 atcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgct 213  Q
    |||||||||||  |||| ||||||||||||||||||||||||||||||||||| ||| |||| ||||||||  || |||| |||||| |||  || || |    
T  5090025 atcccatgacattttagcaagtgtttgtctcgagtggtaatgatgactctgctgccaagaccaaaccaatcaggttctccggccaaaacctgtagttgtt 5090124  T
Q  214 ccagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagccttt 267  Q
     ||||||||| | |||||| ||||||||||||| ||||||||| ||||||||||    
T  5090125 tcagtttgtcaatatcatcgagaatcaaaagaactttctttctttgtagccttt 5090178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 122
Target Start/End: Original strand, 18688598 - 18688705
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    |||||||||||||||||||| | |  |||||||||||||||||||||||||||||| || |||   | | ||| |||||||||  |||||||| ||||||    
T  18688598 tcataacttgaaggaactttataacttttaaaagccatccacctcaacaattcaagagcattttccctagacatcccttttacttcatgcataatttcta 18688697  T
Q  115 tcccatga 122  Q
    || |||||    
T  18688698 tctcatga 18688705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 15 - 267
Target Start/End: Complemental strand, 8693 - 8441
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    |||||||||||||| ||||||||||  |||||||||||||| |||||||| ||||| |||| ||||||||||| |||||| ||  ||||| |||||| ||    
T  8693 tcataacttgaaggtactttgttattcttaaaagccatccatctcaacaactcaagagcttctgttccatacagccctttcacttcatgcgtacttttta 8594  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
    |||||||||   |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||| |||||||| |  || ||||     
T  8593 tcccatgacttcttagtaagtgtttgtctcgagtggtaatgatgaccctgcttccacggccgaaccaatcaggtcctcctgccaaagcatgtagttgctt 8494  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagccttt 267  Q
    ||  | ||| |||||||| |||||||||||| | |||||| |||| |||||||    
T  8493 catatcgtcaacatcatcgagaatcaaaagagtcttctttgtatgcagccttt 8441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 113; Significance: 3e-57; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 15 - 267
Target Start/End: Original strand, 12651 - 12903
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    |||||||||||||| ||||||||||  |||||||||||||| |||||||| ||||| |||| ||||||||||| |||||| ||  ||||| |||||| ||    
T  12651 tcataacttgaaggtactttgttattcttaaaagccatccatctcaacaactcaagagcttctgttccatacagccctttcacttcatgcgtacttttta 12750  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
    |||||||||   |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||| |||||||| |  || ||||     
T  12751 tcccatgacttcttagtaagtgtttgtctcgagtggtaatgatgaccctgcttccacggccgaaccaatcaggtcctcctgccaaagcatgtagttgctt 12850  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagccttt 267  Q
    ||  | ||| |||||||| |||||||||||| | |||||| |||| |||||||    
T  12851 catatcgtcaacatcatcgagaatcaaaagagtcttctttgtatgcagccttt 12903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 15 - 267
Target Start/End: Original strand, 3688 - 3940
Alignment:
Q  15 tcataacttgaaggaactttgttatgtttaaaagccatccacctcaacaattcaagtgcttttgttccatacaacccttttaccgcatgcatactttcta 114  Q
    |||||||||||||| ||||||||||  |||||||||||||| |||||||| ||||| |||| ||| ||||||| |||||| ||  ||||| |||||||||    
T  3688 tcataacttgaaggtactttgttattcttaaaagccatccatctcaacaactcaagagcttctgtcccatacagccctttcacttcatgcgtactttcta 3787  T
Q  115 tcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctc 214  Q
    |||||||||   |||| ||||||||||||||||||||||||||||| ||||||||| | || ||||||||  || |||| ||||||||||  || |||||    
T  3788 tcccatgacttcttagcaagtgtttgtctcgagtggtaatgatgaccctgcttccaaggccaaaccaatcaggttctcctgccaaagcctgtagttgctc 3887  T
Q  215 cagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagccttt 267  Q
    ||  | ||| |||||||| |||||||||||||| ||||||  ||| |||||||    
T  3888 catatcgtcaacatcatcgagaatcaaaagaatcttctttgaatgcagccttt 3940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 49; Significance: 4e-19; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 268
Target Start/End: Complemental strand, 28563 - 28403
Alignment:
Q  108 ctttctatcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctcca 207  Q
    ||||| ||||||||||  | ||| || ||||||| ||||||||||||||| ||| | |||||| |||| |||||||| ||||||||||||||| ||  ||    
T  28563 ctttcaatcccatgacttgctagcaattgtttgtttcgagtggtaatgatcactttacttccaggaccaaaccaatcaagtcctccagccaaaacccgca 28464  T
Q  208 gctgctccagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagcctttg 268  Q
      ||||  |||||||  |||||||| |||||||| |||| ||||||||  || ||||||||    
T  28463 attgctttagtttgtgaacatcatcgagaatcaatagaactttctttcggtgaagcctttg 28403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 136 - 246
Target Start/End: Complemental strand, 40601 - 40491
Alignment:
Q  136 gtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgctccagtttgtcgacatcatcaag 235  Q
    |||||||||||||||||||||||||||||||  || ||| ||||||||| || |||||||||||| ||| ||| |||| |||||  || | || ||| ||    
T  40601 gtttgtctcgagtggtaatgatgactctgctgtcaggactgaaccaatcaagccctccagccaaaccctgcagttgcttcagttcatccatattatctag 40502  T
Q  236 aatcaaaagaa 246  Q
    |||||||||||    
T  40501 aatcaaaagaa 40491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 238
Target Start/End: Complemental strand, 44070 - 43940
Alignment:
Q  108 ctttctatcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctcca 207  Q
    ||||| ||||||||||   |||| || ||| ||||||||||||||| ||| ||||| || ||| ||||||||||||| ||||||||||| ||| ||| ||    
T  44070 ctttcaatcccatgactttttagcaaatgtctgtctcgagtggtaacgatcactctactaccaggaccgaaccaatcaagtcctccagctaaaacctgca 43971  T
Q  208 gctgctccagtttgtcgacatcatcaagaat 238  Q
      |||| ||||| ||  |||||||| |||||    
T  43970 attgcttcagttcgtgaacatcatcgagaat 43940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 268
Target Start/End: Complemental strand, 35840 - 35680
Alignment:
Q  108 ctttctatcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctcca 207  Q
    ||||| ||||||||||  | ||| || ||||||||||||||||||||||| ||| | |||||| |||| |||||||| | | |||| |||||| ||| ||    
T  35840 ctttcaatcccatgacttgctagcaattgtttgtctcgagtggtaatgatcactttacttccaggaccaaaccaatcaatttctcccgccaaaacctgca 35741  T
Q  208 gctgctccagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagcctttg 268  Q
      ||||  |||| ||  |||||||| |||||||| ||||  |||||||  || ||||||||    
T  35740 attgctttagttcgtgaacatcatctagaatcaacagaaccttctttcggtgaagcctttg 35680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 16691971 - 16691903
Alignment:
Q  117 ccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcg 185  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||    
T  16691971 ccatgacttgttagtaagtgtttgtctcgagtggtaatgatgactctacttccaggaccaaaccaatcg 16691903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 114 - 254
Target Start/End: Original strand, 17992290 - 17992430
Alignment:
Q  114 atcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaagcctccagctgct 213  Q
    ||||||||||| ||||  || |||||||||||||||||||||||||||||||| |||||||| | |||| |  |  ||||| ||||| ||| ||  ||||    
T  17992290 atcccatgacatgttaacaaatgtttgtctcgagtggtaatgatgactctgctgccacgaccaagccaaccaggctctccaaccaaaacctgcaattgct 17992389  T
Q  214 ccagtttgtcgacatcatcaagaatcaaaagaattttcttt 254  Q
      ||||||||||  ||||| |||||||| |||| |||||||    
T  17992390 ttagtttgtcgatgtcatcgagaatcaagagaactttcttt 17992430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 200
Target Start/End: Original strand, 57363 - 57455
Alignment:
Q  108 ctttctatcccatgacaggttagtaagtgtttgtctcgagtggtaatgatgactctgcttccacgaccgaaccaatcgagtcctccagccaaa 200  Q
    ||||| ||||||||||  | ||| || |||| |||||||||||||||||| ||| | || ||| |||| |||||||| |||||||||||||||    
T  57363 ctttcaatcccatgacctgctagcaattgttcgtctcgagtggtaatgatcactttactaccaggaccaaaccaatcaagtcctccagccaaa 57455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 266
Target Start/End: Original strand, 5879638 - 5879694
Alignment:
Q  210 tgctccagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagcctt 266  Q
    ||||||| |||||| |||||||||||||||||||| | ||||||||| || ||||||    
T  5879638 tgctccactttgtccacatcatcaagaatcaaaaggactttctttctttgaagcctt 5879694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 266
Target Start/End: Original strand, 5917003 - 5917059
Alignment:
Q  210 tgctccagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagcctt 266  Q
    ||||||| |||||| |||||||||||||||||||| | ||||||||| || ||||||    
T  5917003 tgctccactttgtccacatcatcaagaatcaaaaggactttctttctttgaagcctt 5917059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 265
Target Start/End: Original strand, 5982798 - 5982854
Alignment:
Q  209 ctgctccagtttgtcgacatcatcaagaatcaaaagaattttctttctatgtagcct 265  Q
    ||||| || ||||||||||| ||||||||||||||| | ||||||||| || |||||    
T  5982798 ctgctgcactttgtcgacattatcaagaatcaaaaggactttctttctttgaagcct 5982854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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