View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15195_low_40 (Length: 284)
Name: NF15195_low_40
Description: NF15195
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15195_low_40 |
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Alignment Details
Target: chr3 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 18 - 272
Target Start/End: Original strand, 49410854 - 49411108
Alignment:
| Q |
18 |
acgatcgtcgatgagagcccgtgcgactaatcgacgagccgctgaggtgagagtgggggagaatctagctgttggttttgaaggaatgatacggtttgag |
117 |
Q |
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| T |
49410854 |
acgatcgtcgatgagagcccgtgcgactaatcgacgcgccgctgaggtgagagtgggggagaatctagctgttggttttgaaggaatgatacggtttgag |
49410953 |
T |
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| Q |
118 |
aaaacaccagaaaaaggagggtcgtaagagaatgttgggtcagcatgaatgtagatattgtacaannnnnnngggatttggttgaagtaagattcccata |
217 |
Q |
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| T |
49410954 |
aaaacaccagaaaaaggagggtcgtaagagaatgttgggtcagcatgaatgtagatattgtacaatttttttgggatttggttgaagtaagattcccata |
49411053 |
T |
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| Q |
218 |
atgaagcaaatggaagaggagttgttgttaagaacatgaatgctaattttcttgg |
272 |
Q |
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| T |
49411054 |
atgaagcaaatggaagaggagttgttgttaagaacatgaatgctaattttcttgg |
49411108 |
T |
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