View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15197_low_2 (Length: 617)
Name: NF15197_low_2
Description: NF15197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15197_low_2 |
 |  |
|
| [»] scaffold0294 (1 HSPs) |
 |  |  |
|
| [»] scaffold0591 (1 HSPs) |
 |  |  |
|
| [»] scaffold0027 (1 HSPs) |
 |  |  |
|
| [»] scaffold0121 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr7 (Bit Score: 493; Significance: 0; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 493; E-Value: 0
Query Start/End: Original strand, 13 - 600
Target Start/End: Original strand, 13304221 - 13304810
Alignment:
| Q |
13 |
aaaataatgatacaacataatactacctaaacatcttcatctggccgaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatct |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| | |
|
|
| T |
13304221 |
aaaataatgatacaacataatactacctaaacatcttcatctggccgaatcaaactcttgataatatcttcaggcgatctcatcaacgaagcatccattt |
13304320 |
T |
 |
| Q |
113 |
cgatc-tcgggaacattctgtgctgaccaaatatcgagaacatgttccacacgtcgtcattttatctcagtggacaagtgtcattgagatacagagatgt |
211 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13304321 |
cgatcgtcgggaacattctgtgctgaccaaatatcgagaacatgttccccacatcgtcattttatctcagtggacaagtgtcattgagatacagagatgt |
13304420 |
T |
 |
| Q |
212 |
ctcaactttctctaagtaaactattttctaaaagactannnnnnnnnnnnnnnnnnn-caccgtacatgagtaattttaaccatgaaatctcttgttaaa |
310 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13304421 |
ctcaactttctctaagtaaactattttctaaaagactattttttttcatttcttttttcaccgtacatgagtaattttaaccatgaaatctcttgttaaa |
13304520 |
T |
 |
| Q |
311 |
aatattatctcaatggacacaagtgacatcgaacatgtacacacttatgctatctggtagcagaccagatttcgacaattaaacagttgcgagagtgaat |
410 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13304521 |
aatattatctcaatggacacaagtgacatcgaacatgtacacacttatgctatctggtagcagaccagatttcgacaattaaacagttgcgagagtgaat |
13304620 |
T |
 |
| Q |
411 |
cgtttttgcgcaggccaacctgcatttgactctaaaaagatcaaatctgacttcgataccactcgatctttagcactgacaagaggatggaaaccacttt |
510 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
13304621 |
cgtttttgcgcaggccaacctgcatttgactctaaaaagatcaaatctgacttcgataccactcgatctttagcactgacaagaggatgggaaccacttt |
13304720 |
T |
 |
| Q |
511 |
gataagaaatagtgtttcaattctagaatcagcataaagaagccataacatggaatatgcattaatgccatcaccaagtacctacagttc |
600 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13304721 |
gataagaaatagtgtttcaattctagaatcagcataaagaagccataacatggaatatgcattaatgccatcaccaagtacctacagttc |
13304810 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 28009006 - 28008844
Alignment:
| Q |
13 |
aaaataatgatacaacat---aatactacctaaacatcttcatctggccgaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatcca |
109 |
Q |
| |
|
|||||||||| ||||||| ||||| |||||||||||||||||||||| || ||||||||||||| ||||| ||| ||||||| |||| || |||| | |
|
|
| T |
28009006 |
aaaataatgacacaacattttaatacaacctaaacatcttcatctggccaaagcaaactcttgagagtatcttcagaagatctcagcaacaaaacatcaa |
28008907 |
T |
 |
| Q |
110 |
tctcgatc-tcgggaacattctgtgctgaccaaatatcgagaacatgttccacacgtcgtcat |
171 |
Q |
| |
|
||||||| ||| |||||| |||||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
28008906 |
actcgatcgtcgagaacatgatgtgctgaccaaatatcgagaacatgatcctcacgtcgtcat |
28008844 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 163
Target Start/End: Complemental strand, 7066869 - 7066740
Alignment:
| Q |
35 |
ctacctaaacatcttcatctggccgaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatctcgat-ctcgggaacattctgtg |
133 |
Q |
| |
|
|||||||||||| || | |||| ||||||| ||||| ||||||| | |||||||||||| ||||| ||| |||||||| || ||| ||||||| | ||| |
|
|
| T |
7066869 |
ctacctaaacataatcttgtggcagaatcaagctcttaagaatatattcaggcgatctcagcaacgtagcttccatctcaatcctcaggaacatgcggtg |
7066770 |
T |
 |
| Q |
134 |
ctgaccaaatatcgagaacatgttccacac |
163 |
Q |
| |
|
||||| | |||| ||||||||| ||||||| |
|
|
| T |
7066769 |
ctgacgatatatggagaacatgctccacac |
7066740 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 113
Target Start/End: Complemental strand, 26926694 - 26926635
Alignment:
| Q |
54 |
tggccgaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatctc |
113 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||||||||||||| | ||| |||||||| |
|
|
| T |
26926694 |
tggcagaatcaaactcttgagaatatcttcaggcgatctcatcaatgcagcttccatctc |
26926635 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 35 - 155
Target Start/End: Original strand, 12309600 - 12309721
Alignment:
| Q |
35 |
ctacctaaacatcttcatctggccgaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatctcgat-ctcgggaacattctgtg |
133 |
Q |
| |
|
|||||||||||| || | |||| ||||||||||||||||||||||| || ||||||||| |||| || |||||||| || ||||||||||| | ||| |
|
|
| T |
12309600 |
ctacctaaacataatcttgtggcagaatcaaactcttgagaatatcttcatgcgatctcagcaacctggcttccatctcaatcctcgggaacatgcggtg |
12309699 |
T |
 |
| Q |
134 |
ctgaccaaatatcgagaacatg |
155 |
Q |
| |
|
||||| | ||| ||||||||| |
|
|
| T |
12309700 |
ctgacgatatacggagaacatg |
12309721 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 5282264 - 5282328
Alignment:
| Q |
34 |
actacctaaacatcttcatctggccgaatcaaactcttgagaatatctacaggcgatctcatcaa |
98 |
Q |
| |
|
||||||||||||| | |||||| ||||||||| |||||||||||| |||||||||||||||| |
|
|
| T |
5282264 |
actacctaaacataattttctggcagaatcaaaccgttgagaatatcttcaggcgatctcatcaa |
5282328 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 52 - 100
Target Start/End: Complemental strand, 28066450 - 28066402
Alignment:
| Q |
52 |
tctggccgaatcaaactcttgagaatatctacaggcgatctcatcaacg |
100 |
Q |
| |
|
|||||| |||||||||| |||||||||||| ||| |||||||| ||||| |
|
|
| T |
28066450 |
tctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacg |
28066402 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 85; Significance: 3e-40; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 22843284 - 22843443
Alignment:
| Q |
13 |
aaaataatgatacaacata--atactacctaaacatcttcatctggccgaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccat |
110 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||| ||| |||||||||| |
|
|
| T |
22843284 |
aaaataatgacacaacatataatactacctaaacatcttcgtctggccgaatcaaactcttgagaataacttcaggcgatctcaaaaacaaagcatccat |
22843383 |
T |
 |
| Q |
111 |
ctcgatc-tcgggaacattctgtgctgaccaaatatcgagaacatgttccacacgtcgtc |
169 |
Q |
| |
|
||||||| |||| ||||| ||||||||||||| |||||||||||| ||| || |||||| |
|
|
| T |
22843384 |
ctcgatcgtcggaaacatgttgtgctgaccaaacatcgagaacatgctcctcaagtcgtc |
22843443 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 32108890 - 32109030
Alignment:
| Q |
30 |
taatactacctaaacatcttcatctggccgaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatctcgatc-tcgggaacatt |
128 |
Q |
| |
|
|||||| |||||||||| |||||||| |||||||||||||||| |||||||| ||| ||||||| ||||||| |||||| ||||||| ||| |||||| |
|
|
| T |
32108890 |
taatacaacctaaacattttcatctgtccgaatcaaactcttgcgaatatcttcagaagatctcagcaacgaaacatccaactcgatcgtcgagaacatg |
32108989 |
T |
 |
| Q |
129 |
ctgtgctgaccaaatatcgagaacatgttccacacgtcgtc |
169 |
Q |
| |
|
| ||||||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
32108990 |
ccgtgctgaccaaatatcgagaacatgctcctcacgtcgtc |
32109030 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 12785166 - 12785315
Alignment:
| Q |
29 |
ataatactacctaaacatcttcatctggccgaatcaaactcttgagaatatctacaggcgatctcatcaa--------cgaagcatccatctcgatc-tc |
119 |
Q |
| |
|
|||||| ||||||||||||||||||| | ||||||||||||||| ||||||| |||| ||||| | ||| |||||||| || ||||||| || |
|
|
| T |
12785166 |
ataatattacctaaacatcttcatctagtcgaatcaaactcttgttaatatcttcaggtgatctaagcaatgaacagacgaagcattcacctcgatcatc |
12785265 |
T |
 |
| Q |
120 |
gggaacattctgtgctgaccaaatatcgagaacatgttccacacgtcgtc |
169 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||| ||| ||||||||| |
|
|
| T |
12785266 |
gggaacatgttgtgctgaccaaaaatcgagaacatgctcctcacgtcgtc |
12785315 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 35 - 127
Target Start/End: Original strand, 24629922 - 24630015
Alignment:
| Q |
35 |
ctacctaaacatcttcatctggccgaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatctcgat-ctcgggaacat |
127 |
Q |
| |
|
|||||||||||| || | |||| ||||||||||||||||||||||| |||||||||||| |||| ||| ||| |||| || ||||||||||| |
|
|
| T |
24629922 |
ctacctaaacataatcttgtggcagaatcaaactcttgagaatatcttcaggcgatctcagcaacatagcttccgtctcaatcctcgggaacat |
24630015 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 26140340 - 26140282
Alignment:
| Q |
59 |
gaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatctcgatc |
117 |
Q |
| |
|
||||||||||||| ||||||||| |||||||||||| ||||| | ||| ||| |||||| |
|
|
| T |
26140340 |
gaatcaaactcttaagaatatcttcaggcgatctcaacaacgtaacatacatatcgatc |
26140282 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 84; Significance: 1e-39; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 29 - 155
Target Start/End: Complemental strand, 37396928 - 37396801
Alignment:
| Q |
29 |
ataatactacctaaacatcttcatctggccgaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatctcgatc-tcgggaacat |
127 |
Q |
| |
|
||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||| ||||||| ||||| |||||||||||||||| | |||||||| |
|
|
| T |
37396928 |
ataatactacctaaacatctttatctagccgaatcaaactcttgagaatatcttcaggtgatctcagcaacgtagcatccatctcgatcgttgggaacat |
37396829 |
T |
 |
| Q |
128 |
tctgtgctgaccaaatatcgagaacatg |
155 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
37396828 |
gttgtgctgaccaaatatcgagaacatg |
37396801 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 29 - 165
Target Start/End: Original strand, 7576087 - 7576224
Alignment:
| Q |
29 |
ataatactacctaaacatcttcatctggccgaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatctcgatc-tcgggaacat |
127 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||| ||||| | ||||||| || |||||||||| ||| |||||| |
|
|
| T |
7576087 |
ataatactacctaaacatcttcatatggccgaattaaactcttgagaatatctttaggtgatctaagtaacgaagtatacatctcgatcgtcgagaacat |
7576186 |
T |
 |
| Q |
128 |
tctgtgctgaccaaatatcgagaacatgttccacacgt |
165 |
Q |
| |
|
| |||| ||||||||||||||||||| ||| ||||| |
|
|
| T |
7576187 |
gttatgctaaccaaatatcgagaacatgctcctcacgt |
7576224 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 38 - 136
Target Start/End: Original strand, 16418101 - 16418200
Alignment:
| Q |
38 |
cctaaacatcttcatctggccgaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatctcgat-ctcgggaacattctgtgctg |
136 |
Q |
| |
|
||||||||| || |||||| || |||||||||||||||||||| |||| ||||||| ||| | | |||||||||| || ||||||||||| ||||||| |
|
|
| T |
16418101 |
cctaaacataatcttctggcagagtcaaactcttgagaatatcttcaggtgatctcagcaatgtaacatccatctcaatcctcgggaacatgttgtgctg |
16418200 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 155
Target Start/End: Complemental strand, 10976000 - 10975898
Alignment:
| Q |
54 |
tggccgaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatctcgat-ctcgggaacattctgtgctgaccaaatatcgagaac |
152 |
Q |
| |
|
|||| ||||||||||||||||||||| | ||| |||||||| |||| ||| |||||||| || ||||||||||| | |||||||| | ||| |||||| |
|
|
| T |
10976000 |
tggcagaatcaaactcttgagaatatattcagacgatctcagcaacatagcttccatctcaatcctcgggaacatgcggtgctgacgatatacagagaac |
10975901 |
T |
 |
| Q |
153 |
atg |
155 |
Q |
| |
|
||| |
|
|
| T |
10975900 |
atg |
10975898 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 15798097 - 15798143
Alignment:
| Q |
54 |
tggccgaatcaaactcttgagaatatctacaggcgatctcatcaacg |
100 |
Q |
| |
|
|||| |||||||||| |||||||||||| ||||| |||||||||||| |
|
|
| T |
15798097 |
tggcggaatcaaactgttgagaatatcttcaggcaatctcatcaacg |
15798143 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 26604613 - 26604651
Alignment:
| Q |
43 |
acatcttcatctggccgaatcaaactcttgagaatatct |
81 |
Q |
| |
|
|||||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
26604613 |
acatcttcatctggacgaatcaaactcttgaaaatatct |
26604651 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 73; Significance: 5e-33; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 13 - 155
Target Start/End: Complemental strand, 26793551 - 26793405
Alignment:
| Q |
13 |
aaaataatgatacaacataata---ctacctaaacatcttcatctggccgaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatcca |
109 |
Q |
| |
|
|||||||||| ||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||| | |||||||||| ||| | || ||||| |
|
|
| T |
26793551 |
aaaataatgacacaacataataatactacataaacatcttcatttggccgaatcaaactcttgagaatatcttctggcgatctcagcaatgtagaatcca |
26793452 |
T |
 |
| Q |
110 |
tctcgat-ctcgggaacattctgtgctgaccaaatatcgagaacatg |
155 |
Q |
| |
|
||||||| ||||||||||| |||| |||||||||||||||| |||| |
|
|
| T |
26793451 |
tctcgatcctcgggaacatgttgtgttgaccaaatatcgagagcatg |
26793405 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 29 - 155
Target Start/End: Complemental strand, 27799882 - 27799755
Alignment:
| Q |
29 |
ataatactacctaaacatcttcatctggccgaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatctcgat-ctcgggaacat |
127 |
Q |
| |
|
||||||||||| |||| ||||||||| ||||||||||||||||||||||||| |||| ||| || ||||| ||||||||||||||| | ||| ||||| |
|
|
| T |
27799882 |
ataatactacccaaacttcttcatctaaccgaatcaaactcttgagaatatcttcaggagattccagcaacgtagcatccatctcgatccacggaaacat |
27799783 |
T |
 |
| Q |
128 |
tctgtgctgaccaaatatcgagaacatg |
155 |
Q |
| |
|
||||||| |||||||| ||||||||| |
|
|
| T |
27799782 |
gttgtgctggccaaatattgagaacatg |
27799755 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 39899880 - 39899924
Alignment:
| Q |
37 |
acctaaacatcttcatctggccgaatcaaactcttgagaatatct |
81 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| |||||||||||| |
|
|
| T |
39899880 |
acctaaacatcttcatctagccgaatcaaacttttgagaatatct |
39899924 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 15471712 - 15471672
Alignment:
| Q |
60 |
aatcaaactcttgagaatatctacaggcgatctcatcaacg |
100 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| ||||| |
|
|
| T |
15471712 |
aatcaaactcttgagaatatcttcaggcgatctcagcaacg |
15471672 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 48706929 - 48706987
Alignment:
| Q |
59 |
gaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatctcgatc |
117 |
Q |
| |
|
||||||||||||||||||||||| ||| |||||||| ||||| | ||| ||| |||||| |
|
|
| T |
48706929 |
gaatcaaactcttgagaatatcttcagacgatctcagcaacgtaacatacatatcgatc |
48706987 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 100
Target Start/End: Original strand, 21760408 - 21760449
Alignment:
| Q |
59 |
gaatcaaactcttgagaatatctacaggcgatctcatcaacg |
100 |
Q |
| |
|
|||||||||| |||||||||||| ||| |||||||||||||| |
|
|
| T |
21760408 |
gaatcaaactgttgagaatatcttcagacgatctcatcaacg |
21760449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 11789163 - 11789211
Alignment:
| Q |
52 |
tctggccgaatcaaactcttgagaatatctacaggcgatctcatcaacg |
100 |
Q |
| |
|
|||||| |||||||||| || ||||||||| |||||||||||| ||||| |
|
|
| T |
11789163 |
tctggcagaatcaaactgtttagaatatcttcaggcgatctcaacaacg |
11789211 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 70; Significance: 3e-31; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 29788228 - 29788369
Alignment:
| Q |
29 |
ataatactacctaaacatcttcatctggccgaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatctcgatc-tcgggaacat |
127 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||| ||| || | ||||||| |||||||| ||||||||||||| || ||||| |
|
|
| T |
29788228 |
ataatactacctaaacatcttcatctgaccgaatcaaactcttgagaatttcttcaagtgatctcagcaacgaagtatccatctcgatcgtcacaaacat |
29788327 |
T |
 |
| Q |
128 |
tctgtgctgaccaaatatcgagaacatgttccacacgtcgtc |
169 |
Q |
| |
|
||||||||||||||||| |||||||| ||| || |||||| |
|
|
| T |
29788328 |
gttgtgctgaccaaatatcaagaacatgctcctcatgtcgtc |
29788369 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 29 - 155
Target Start/End: Original strand, 29634898 - 29635025
Alignment:
| Q |
29 |
ataatactacctaaacatcttcatctggccgaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatctcga-tctcgggaacat |
127 |
Q |
| |
|
||||||||||||| ||| ||||||||| |||| |||||||||||||||||||| |||||||||||| ||||| |||||| ||||||| | ||||||||| |
|
|
| T |
29634898 |
ataatactacctacacaccttcatctgaccgattcaaactcttgagaatatcttcaggcgatctcagcaacggagcatctatctcgattgtcgggaacaa |
29634997 |
T |
 |
| Q |
128 |
tctgtgctgaccaaatatcgagaacatg |
155 |
Q |
| |
|
|||||| | |||||||| |||||||| |
|
|
| T |
29634998 |
gttgtgctaatcaaatatcaagaacatg |
29635025 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 20409755 - 20409896
Alignment:
| Q |
29 |
ataatactacctaaacatcttcatctggccgaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatctcgat-ctcgggaacat |
127 |
Q |
| |
|
|||||||||||||||| | ||||||||| |||||||||||||| ||||||| ||||||||||| ||| | |||||| ||||| || ||||||||||| |
|
|
| T |
20409755 |
ataatactacctaaacttaatcatctggcataatcaaactcttgaaaatatcttaaggcgatctcaacaatgtagcatcgatctcaatcctcgggaacat |
20409854 |
T |
 |
| Q |
128 |
tctgtgctgaccaaatatcgagaacatgttccacacgtcgtc |
169 |
Q |
| |
|
|||| ||||||||||||||||||||| ||| ||| ||||| |
|
|
| T |
20409855 |
gttgtgttgaccaaatatcgagaacatgctcctcacatcgtc |
20409896 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 49 - 172
Target Start/End: Complemental strand, 4812355 - 4812233
Alignment:
| Q |
49 |
tcatctggccgaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatctcgatc-tcgggaacattctgtgctgaccaaatatcg |
147 |
Q |
| |
|
|||||||||||||||||| || ||||||||||| ||| ||||||| |||| || |||||| || |||| ||| |||||| ||||||||||||||||| |
|
|
| T |
4812355 |
tcatctggccgaatcaaagtcatgagaatatcttcagaagatctcaccaacaaaacatccaacttgatcgtcgagaacatgttgtgctgaccaaatatc- |
4812257 |
T |
 |
| Q |
148 |
agaacatgttccacacgtcgtcatt |
172 |
Q |
| |
|
||||||| ||| |||||||||||| |
|
|
| T |
4812256 |
-gaacatgctcctcacgtcgtcatt |
4812233 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 17370994 - 17370908
Alignment:
| Q |
59 |
gaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatctcgatc-tcgggaacattctgtgctgaccaaata |
144 |
Q |
| |
|
||||||||||||||||||||||| ||||||| |||| ||||| ||| ||||||| ||| |||||||||| | |||||||| ||||| |
|
|
| T |
17370994 |
gaatcaaactcttgagaatatcttcaggcgacctcaacaacgttgcaaccatctcaatcatcgggaacatgcggtgctgacgaaata |
17370908 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 169
Target Start/End: Original strand, 17267307 - 17267425
Alignment:
| Q |
52 |
tctggccgaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatctcgat-ctcgggaacattctgtgctgaccaaatatcgaga |
150 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |||| |||||| ||||| | | | ||| ||||| | ||||||||| ||||||| | ||| ||||||| |
|
|
| T |
17267307 |
tctggcagaatcaaactcttgagaatatctttaggcaatctcagcaacgtaacttacatatcgatccacgggaacatgatgtgctgccaaaaaatcgaga |
17267406 |
T |
 |
| Q |
151 |
acatgttccacacgtcgtc |
169 |
Q |
| |
|
||||| ||| ||| ||||| |
|
|
| T |
17267407 |
acatgctcctcacatcgtc |
17267425 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 3162575 - 3162639
Alignment:
| Q |
16 |
ataatgatacaacataatactacctaaacatcttcatctggccgaatcaaactcttgagaatatct |
81 |
Q |
| |
|
||||| |||||| |||||| |||||| |||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
3162575 |
ataataatacaatttaatacaacctaa-catcttcatctgagcgaatcaaactcttcagaatatct |
3162639 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 60 - 155
Target Start/End: Original strand, 55390799 - 55390895
Alignment:
| Q |
60 |
aatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatctcgat-ctcgggaacattctgtgctgaccaaatatcgagaacatg |
155 |
Q |
| |
|
||||||||| |||||||||||| |||| ||| ||| ||| | |||||||||||| || |||| |||||| | ||| |||| ||||| ||||||||| |
|
|
| T |
55390799 |
aatcaaacttttgagaatatcttcaggtgatatcaacaatgtagcatccatctcaatcctcgcgaacatacggtgttgacgaaatactgagaacatg |
55390895 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 69; Significance: 1e-30; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 13 - 155
Target Start/End: Original strand, 5306437 - 5306583
Alignment:
| Q |
13 |
aaaataatgatacaacataa---tactacctaaacatcttcatctggccgaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatcca |
109 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||| |||| | ||||| ||| | |||||||| |
|
|
| T |
5306437 |
aaaataatgacacaacataataatactacctaaacatcttcgtctggccgagtcaaactcttgagaatatcttcaggaggtctcaacaatgtagcatcca |
5306536 |
T |
 |
| Q |
110 |
tctcgatc-tcgggaacattctgtgctgaccaaatatcgagaacatg |
155 |
Q |
| |
|
|||||||| ||||||| || | | |||||||||||||||||||||| |
|
|
| T |
5306537 |
tctcgatcgtcgggaagatgatatcctgaccaaatatcgagaacatg |
5306583 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 52 - 113
Target Start/End: Original strand, 28746973 - 28747034
Alignment:
| Q |
52 |
tctggccgaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatctc |
113 |
Q |
| |
|
|||||| |||||||||| |||||||||| | |||||||||||| ||||| ||| |||||||| |
|
|
| T |
28746973 |
tctggcagaatcaaactgttgagaatattttcaggcgatctcagcaacgtagcttccatctc |
28747034 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 37059093 - 37059057
Alignment:
| Q |
45 |
atcttcatctggccgaatcaaactcttgagaatatct |
81 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
37059093 |
atctttatctggccgaatcaaactcttgagaatatct |
37059057 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 18332770 - 18332692
Alignment:
| Q |
35 |
ctacctaaacatcttcatctggccgaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatctc |
113 |
Q |
| |
|
|||| ||||||| |||| |||| |||||||||||| | ||||||| |||||||||||| ||||| ||| |||||||| |
|
|
| T |
18332770 |
ctacataaacataatcatgtggcataatcaaactcttcataatatcttcaggcgatctcaacaacgtagcttccatctc |
18332692 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 100
Target Start/End: Original strand, 26617493 - 26617534
Alignment:
| Q |
59 |
gaatcaaactcttgagaatatctacaggcgatctcatcaacg |
100 |
Q |
| |
|
||||||||||||| ||||||||| |||||||||||| ||||| |
|
|
| T |
26617493 |
gaatcaaactcttaagaatatcttcaggcgatctcagcaacg |
26617534 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 66; Significance: 7e-29; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 29 - 169
Target Start/End: Complemental strand, 44100707 - 44100566
Alignment:
| Q |
29 |
ataatactacctaaacatcttcatctggccgaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatctcgat-ctcgggaacat |
127 |
Q |
| |
|
|||||| ||||||||||||||| |||| |||||||||| |||||||||||||| |||| ||||||| ||| | ||||||||||||||| ||||| ||||| |
|
|
| T |
44100707 |
ataataatacctaaacatcttcctctgaccgaatcaaattcttgagaatatcttcaggtgatctcagcaatgtagcatccatctcgatcctcggaaacat |
44100608 |
T |
 |
| Q |
128 |
tctgtgctgaccaaatatcgagaacatgttccacacgtcgtc |
169 |
Q |
| |
|
|||||||||||||| |||| |||||| ||| ||| ||||| |
|
|
| T |
44100607 |
gttgtgctgaccaaatgtcgataacatgctcctcacatcgtc |
44100566 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 12227470 - 12227611
Alignment:
| Q |
29 |
ataatactacctaaacatcttcatctggccgaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatctcgat-ctcgggaacat |
127 |
Q |
| |
|
|||||| ||||||||||| |||||| || |||||||||| ||| ||||| || || |||||| |||| ||||||||||||||| |||| |||||| |
|
|
| T |
12227470 |
ataatattacctaaacataatcatctagcataatcaaactcatgaaaatatactcaagcaatctcagcaacatagcatccatctcgatcctcgagaacat |
12227569 |
T |
 |
| Q |
128 |
tctgtgctgaccaaatatcgagaacatgttccacacgtcgtc |
169 |
Q |
| |
|
||||| ||||||||||||||||||| ||| ||||||||| |
|
|
| T |
12227570 |
gttgtgcaaaccaaatatcgagaacatgctcctcacgtcgtc |
12227611 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 127
Target Start/End: Complemental strand, 31931778 - 31931690
Alignment:
| Q |
40 |
taaacatcttcatctggccgaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatctcgat-ctcgggaacat |
127 |
Q |
| |
|
||||||| |||| |||| |||||||| |||| ||||||||| |||||||||||| ||||| | | |||||||| || ||||||||||| |
|
|
| T |
31931778 |
taaacataatcatgtggcagaatcaaattcttcagaatatcttcaggcgatctcagcaacgtaacttccatctcaatcctcgggaacat |
31931690 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 63; Significance: 4e-27; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 23607938 - 23608080
Alignment:
| Q |
29 |
ataatactacctaaacatcttcatctggccgaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatctcga-tctcgggaacat |
127 |
Q |
| |
|
||||||||| |||||| |||||||||||| |||||||||||||||||||||| |||| |||||| ||||||||||||||||| || | || ||||||| |
|
|
| T |
23607938 |
ataatactatctaaacttcttcatctggctaaatcaaactcttgagaatatcttcaggtgatctctgcaacgaagcatccatctagattgtcaggaacat |
23608037 |
T |
 |
| Q |
128 |
-tctgtgctgaccaaatatcgagaacatgttccacacgtcgtc |
169 |
Q |
| |
|
| ||| ||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
23608038 |
gtttgttttgaccaaatgtcgagaacatgttcctcacgtcgtc |
23608080 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 35 - 155
Target Start/End: Complemental strand, 14095850 - 14095729
Alignment:
| Q |
35 |
ctacctaaacatcttcatctggccgaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatctcgat-ctcgggaacattctgtg |
133 |
Q |
| |
|
|||||||||||| || | |||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||| || ||||||||||| ||| |
|
|
| T |
14095850 |
ctacctaaacataatcttgtggcataatcaaactcttgagaatatctacaggcgatctcagcaacgaagcttccatctcaatcctcgggaacatgtggtg |
14095751 |
T |
 |
| Q |
134 |
ctgaccaaatatcgagaacatg |
155 |
Q |
| |
|
||||| | |||| ||||||||| |
|
|
| T |
14095750 |
ctgacgatatatggagaacatg |
14095729 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 22962421 - 22962483
Alignment:
| Q |
16 |
ataatgatacaacataatactacctaaacatcttcatctggccgaatcaaactcttgagaata |
78 |
Q |
| |
|
||||| |||||| |||||| |||||||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
22962421 |
ataataatacaatttaatacaacctaaacatcttcatctagccgaatcaaaatcttgagaata |
22962483 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 23825972 - 23825910
Alignment:
| Q |
16 |
ataatgatacaacataatactacctaaacatcttcatctggccgaatcaaactcttgagaata |
78 |
Q |
| |
|
||||| |||||| |||||| |||||||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
23825972 |
ataataatacaatttaatacaacctaaacatcttcatctagccgaatcaaaatcttgagaata |
23825910 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 5973050 - 5973119
Alignment:
| Q |
59 |
gaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatctcgat-ctcgggaacat |
127 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| ||| | ||| |||||||| || ||||||||||| |
|
|
| T |
5973050 |
gaatcaaactcttgagaatatcttcaggcgatctcagcaatgtagcttccatctcaatcctcgggaacat |
5973119 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 8711072 - 8711003
Alignment:
| Q |
59 |
gaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatctcgat-ctcgggaacat |
127 |
Q |
| |
|
||||||||||||||||||||||| |||| |||||| ||| | ||| |||||||| || ||||||||||| |
|
|
| T |
8711072 |
gaatcaaactcttgagaatatctttaggcaatctcagcaatgtagcttccatctcaatcctcgggaacat |
8711003 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 59 - 99
Target Start/End: Original strand, 3097533 - 3097573
Alignment:
| Q |
59 |
gaatcaaactcttgagaatatctacaggcgatctcatcaac |
99 |
Q |
| |
|
|||||||||| |||||||||||| |||||||||||| |||| |
|
|
| T |
3097533 |
gaatcaaactgttgagaatatcttcaggcgatctcagcaac |
3097573 |
T |
 |
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Target: scaffold0294 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 1263 - 1102
Alignment:
| Q |
13 |
aaaataatgatacaacataatactac---ctaaacatcttcatctggcc-gaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatcc |
108 |
Q |
| |
|
|||||||||| ||||||||||| ||| |||||||||||||||| ||| ||||||||||||||||||||||| ||| ||||||| | || || ||||| |
|
|
| T |
1263 |
aaaataatgacacaacataataatactttctaaacatcttcatctagcccgaatcaaactcttgagaatatcttcagaagatctcagctacaaaacatcc |
1164 |
T |
 |
| Q |
109 |
atctcgatc-tcgggaacattctgtgctgaccaaatatcgagaacatgttccacacgtcgtc |
169 |
Q |
| |
|
| ||||||| ||| |||||| ||||| ||||||||||| |||||||| ||| ||||||||| |
|
|
| T |
1163 |
aactcgatcgtcgagaacatgatgtgccgaccaaatatcaagaacatgatcctcacgtcgtc |
1102 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0591 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0591
Description:
Target: scaffold0591; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 171
Target Start/End: Complemental strand, 2821 - 2694
Alignment:
| Q |
45 |
atcttcatctggccgaatcaaactcttgagaatatctacaggcgatctcatcaacgaagcatccatctcgatctcgg-gaacattctgtgctgaccaaat |
143 |
Q |
| |
|
|||||||||||| |||||||| ||||||| ||||| ||| ||||||| ||| ||| |||| | ||||||| | | ||||| | |||||| ||||||| |
|
|
| T |
2821 |
atcttcatctggttaaatcaaacccttgagattatcttcagaagatctcagcaatgaaacatcaaactcgatcgccgagaacactttgtgctaaccaaat |
2722 |
T |
 |
| Q |
144 |
atcgagaacatgttccacacgtcgtcat |
171 |
Q |
| |
|
|||| || |||||||| |||||| |||| |
|
|
| T |
2721 |
atcgtgagcatgttcctcacgtcatcat |
2694 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0027 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0027
Description:
Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 100
Target Start/End: Complemental strand, 36852 - 36811
Alignment:
| Q |
59 |
gaatcaaactcttgagaatatctacaggcgatctcatcaacg |
100 |
Q |
| |
|
|||| |||||||||||||||||| |||||||||||| ||||| |
|
|
| T |
36852 |
gaattaaactcttgagaatatcttcaggcgatctcaacaacg |
36811 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0121 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0121
Description:
Target: scaffold0121; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 5536 - 5496
Alignment:
| Q |
60 |
aatcaaactcttgagaatatctacaggcgatctcatcaacg |
100 |
Q |
| |
|
||||||||| |||||||||||| |||||||||||| ||||| |
|
|
| T |
5536 |
aatcaaactgttgagaatatcttcaggcgatctcaacaacg |
5496 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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