View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15197_low_8 (Length: 299)
Name: NF15197_low_8
Description: NF15197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15197_low_8 |
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Alignment Details
Target: chr1 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 8158594 - 8158314
Alignment:
| Q |
1 |
actggtaaaacaaattggtgaatcttcaggcttgccttctgggcaatcatcagtggaacatagccctaaaagatcaaagaggtttgaattagatttgaat |
100 |
Q |
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| T |
8158594 |
actggtaaaacaaattggtgaatcttcaggcttgccttctgggcaatcatcagtggaacatagccctaaaagatcaaagaggtttgaattagatttgaat |
8158495 |
T |
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| Q |
101 |
agtattggtgatgatggtgatacccaaccttcagatcagaggatggaggggcagctcttctttggaagaaatggctattggagcccatcacctgcatcat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8158494 |
agtattggtgatgatggtgatacccaaccttcagatcagaggatggaggggcagctcttctttggaagaaatggctattggagcccatcacctgcatcat |
8158395 |
T |
|
| Q |
201 |
catcgtcgtcaatgcagccgtcagttcgaaacattgatttgaatgatagaccgtactttcaaactgatttactggaccaag |
281 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8158394 |
catcgtcgtcaatgcagccgtcagttcgaaacattgatttgaatgatagaccgtactttcaaactgatttactggaccaag |
8158314 |
T |
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