View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15198_low_10 (Length: 237)

Name: NF15198_low_10
Description: NF15198
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15198_low_10
NF15198_low_10
[»] chr2 (22 HSPs)
chr2 (1-222)||(492663-492889)
chr2 (148-195)||(13162737-13162784)
chr2 (65-132)||(8687774-8687842)
chr2 (1-37)||(492870-492906)
chr2 (70-132)||(5784625-5784688)
chr2 (86-133)||(9787206-9787253)
chr2 (148-202)||(17784694-17784749)
chr2 (70-132)||(29223713-29223776)
chr2 (70-132)||(29337012-29337075)
chr2 (70-132)||(36040363-36040426)
chr2 (148-195)||(37439738-37439785)
chr2 (70-132)||(42702307-42702370)
chr2 (91-133)||(21159985-21160027)
chr2 (144-195)||(21160714-21160770)
chr2 (70-133)||(24663231-24663295)
chr2 (92-132)||(36557623-36557663)
chr2 (92-132)||(43991552-43991592)
chr2 (70-132)||(23925132-23925195)
chr2 (70-132)||(32522927-32522990)
chr2 (161-195)||(41978350-41978384)
chr2 (65-133)||(13230441-13230510)
chr2 (70-133)||(31758272-31758336)
[»] chr1 (23 HSPs)
chr1 (1-137)||(36080144-36080285)
chr1 (57-133)||(15161088-15161164)
chr1 (144-195)||(15162161-15162212)
chr1 (149-195)||(36084497-36084543)
chr1 (144-187)||(3365608-3365651)
chr1 (147-202)||(9293152-9293207)
chr1 (70-132)||(16129657-16129720)
chr1 (72-132)||(8996363-8996423)
chr1 (70-132)||(13218146-13218209)
chr1 (70-132)||(33492299-33492362)
chr1 (70-132)||(38122033-38122096)
chr1 (70-132)||(39001282-39001345)
chr1 (70-132)||(41000204-41000267)
chr1 (144-195)||(8995633-8995687)
chr1 (92-132)||(9667796-9667836)
chr1 (92-132)||(16832883-16832923)
chr1 (92-132)||(49249093-49249133)
chr1 (70-132)||(12168317-12168380)
chr1 (70-132)||(44505371-44505434)
chr1 (92-133)||(432440-432481)
chr1 (61-133)||(7612389-7612464)
chr1 (69-132)||(11738898-11738962)
chr1 (92-132)||(16130234-16130274)
[»] chr3 (28 HSPs)
chr3 (57-135)||(2357146-2357224)
chr3 (64-137)||(49434089-49434162)
chr3 (144-195)||(24899305-24899356)
chr3 (144-195)||(24905771-24905822)
chr3 (57-133)||(1232591-1232672)
chr3 (70-133)||(33247986-33248050)
chr3 (69-132)||(45527644-45527708)
chr3 (70-132)||(3588398-3588461)
chr3 (70-132)||(7653323-7653386)
chr3 (70-132)||(8615501-8615564)
chr3 (70-132)||(9989394-9989457)
chr3 (70-132)||(10386171-10386234)
chr3 (70-132)||(20963754-20963817)
chr3 (70-132)||(23385394-23385457)
chr3 (70-132)||(27030784-27030847)
chr3 (144-195)||(1231863-1231918)
chr3 (92-132)||(20837115-20837155)
chr3 (92-132)||(22097688-22097728)
chr3 (144-195)||(23194654-23194710)
chr3 (59-135)||(26335102-26335181)
chr3 (92-132)||(27850651-27850691)
chr3 (92-132)||(36469536-36469576)
chr3 (70-132)||(52308186-52308249)
chr3 (161-195)||(3589156-3589190)
chr3 (92-130)||(48168296-48168334)
chr3 (57-133)||(23193908-23193985)
chr3 (155-195)||(545792-545832)
chr3 (161-197)||(2785633-2785669)
[»] scaffold0160 (2 HSPs)
scaffold0160 (54-135)||(35381-35461)
scaffold0160 (144-195)||(34693-34749)
[»] chr6 (31 HSPs)
chr6 (62-135)||(1454786-1454859)
chr6 (62-135)||(1466478-1466551)
chr6 (57-131)||(14270657-14270731)
chr6 (145-195)||(9517821-9517871)
chr6 (57-140)||(9518537-9518620)
chr6 (62-135)||(13173914-13173987)
chr6 (62-135)||(13182447-13182520)
chr6 (91-133)||(15642436-15642478)
chr6 (72-132)||(34006502-34006563)
chr6 (70-133)||(14479558-14479622)
chr6 (72-128)||(34913449-34913505)
chr6 (70-132)||(3539045-3539108)
chr6 (70-132)||(5989103-5989166)
chr6 (70-132)||(26510413-26510476)
chr6 (70-132)||(26515529-26515592)
chr6 (70-132)||(32806863-32806926)
chr6 (60-133)||(25976940-25977011)
chr6 (138-195)||(34007185-34007247)
chr6 (161-202)||(21631942-21631983)
chr6 (161-202)||(25977706-25977747)
chr6 (144-195)||(14271407-14271463)
chr6 (70-133)||(26604337-26604401)
chr6 (144-195)||(34914424-34914480)
chr6 (70-132)||(9932906-9932969)
chr6 (92-131)||(21596633-21596672)
chr6 (70-132)||(24161356-24161419)
chr6 (161-195)||(1455548-1455582)
chr6 (161-195)||(1467240-1467274)
chr6 (161-195)||(13181727-13181761)
chr6 (62-132)||(21631170-21631241)
chr6 (70-133)||(24878863-24878927)
[»] scaffold0505 (2 HSPs)
scaffold0505 (63-135)||(1082-1154)
scaffold0505 (161-196)||(353-388)
[»] chr7 (28 HSPs)
chr7 (57-135)||(29032882-29032960)
chr7 (144-191)||(22909852-22909899)
chr7 (60-132)||(22909108-22909178)
chr7 (70-132)||(2477656-2477719)
chr7 (70-132)||(2631394-2631457)
chr7 (70-132)||(8107989-8108052)
chr7 (70-132)||(10346406-10346469)
chr7 (70-132)||(12190841-12190904)
chr7 (70-132)||(19472364-19472427)
chr7 (70-132)||(31158377-31158440)
chr7 (70-132)||(31664595-31664658)
chr7 (70-132)||(33160180-33160243)
chr7 (70-131)||(6172525-6172587)
chr7 (70-131)||(12183864-12183926)
chr7 (92-132)||(3544981-3545021)
chr7 (159-195)||(7413186-7413222)
chr7 (92-132)||(22321901-22321941)
chr7 (92-132)||(22818433-22818473)
chr7 (92-132)||(23795115-23795155)
chr7 (70-132)||(12090561-12090624)
chr7 (161-195)||(29032163-29032197)
chr7 (70-131)||(45500812-45500874)
chr7 (57-132)||(1274575-1274648)
chr7 (69-133)||(2797663-2797728)
chr7 (61-133)||(27951484-27951557)
chr7 (92-132)||(1953978-1954018)
chr7 (72-132)||(19063514-19063574)
chr7 (70-133)||(31878599-31878663)
[»] chr5 (21 HSPs)
chr5 (22-133)||(39656138-39656255)
chr5 (147-195)||(39655484-39655532)
chr5 (70-132)||(7314963-7315026)
chr5 (70-132)||(9404422-9404485)
chr5 (70-132)||(11723377-11723440)
chr5 (70-132)||(11766753-11766816)
chr5 (70-132)||(31845978-31846041)
chr5 (70-132)||(33434601-33434664)
chr5 (70-132)||(34456295-34456358)
chr5 (61-132)||(34869847-34869921)
chr5 (92-132)||(14344490-14344530)
chr5 (148-192)||(19853731-19853775)
chr5 (72-132)||(32226833-32226893)
chr5 (70-132)||(16904710-16904773)
chr5 (70-132)||(24835733-24835796)
chr5 (70-132)||(27167198-27167261)
chr5 (70-132)||(30607177-30607240)
chr5 (145-195)||(37251275-37251330)
chr5 (72-135)||(37252002-37252065)
chr5 (161-195)||(3663998-3664032)
chr5 (148-195)||(34738124-34738172)
[»] chr4 (16 HSPs)
chr4 (145-195)||(33110070-33110120)
chr4 (70-132)||(323436-323499)
chr4 (70-132)||(40995650-40995713)
chr4 (57-133)||(33110803-33110880)
chr4 (70-132)||(4839237-4839300)
chr4 (70-132)||(5273652-5273715)
chr4 (70-132)||(35416784-35416847)
chr4 (92-133)||(46692136-46692177)
chr4 (70-133)||(19247927-19247991)
chr4 (70-132)||(26069723-26069786)
chr4 (72-133)||(1187965-1188027)
chr4 (70-135)||(30218489-30218555)
chr4 (61-133)||(8894920-8894993)
chr4 (92-132)||(44432154-44432194)
chr4 (70-133)||(52618512-52618576)
chr4 (145-181)||(53896115-53896151)
[»] chr8 (31 HSPs)
chr8 (72-133)||(22222767-22222828)
chr8 (72-133)||(22229109-22229170)
chr8 (72-133)||(22233951-22234012)
chr8 (138-195)||(12538892-12538949)
chr8 (65-132)||(11309088-11309156)
chr8 (60-132)||(13509954-13510024)
chr8 (60-132)||(13599484-13599554)
chr8 (70-132)||(3298800-3298863)
chr8 (70-132)||(8743384-8743447)
chr8 (70-132)||(9068268-9068331)
chr8 (70-132)||(16580083-16580146)
chr8 (70-132)||(22180599-22180662)
chr8 (144-202)||(22226872-22226933)
chr8 (144-202)||(22233214-22233275)
chr8 (70-132)||(27348024-27348087)
chr8 (70-132)||(28370091-28370154)
chr8 (70-132)||(28926244-28926307)
chr8 (70-132)||(41577432-41577495)
chr8 (70-135)||(16958548-16958614)
chr8 (138-195)||(17993595-17993657)
chr8 (57-133)||(17992879-17992956)
chr8 (144-195)||(22222048-22222102)
chr8 (144-195)||(22228390-22228444)
chr8 (145-195)||(13510699-13510754)
chr8 (145-195)||(22242614-22242667)
chr8 (70-132)||(24040714-24040777)
chr8 (70-132)||(34006861-34006924)
chr8 (161-195)||(4861322-4861356)
chr8 (72-132)||(22243345-22243406)
chr8 (70-133)||(12538155-12538219)
chr8 (70-133)||(21692165-21692229)
[»] scaffold0091 (1 HSPs)
scaffold0091 (54-137)||(14169-14250)
[»] scaffold0859 (1 HSPs)
scaffold0859 (144-195)||(4720-4771)
[»] scaffold0298 (2 HSPs)
scaffold0298 (60-133)||(12302-12373)
scaffold0298 (60-133)||(16072-16143)
[»] scaffold0124 (1 HSPs)
scaffold0124 (60-133)||(12185-12256)
[»] scaffold1494 (1 HSPs)
scaffold1494 (70-132)||(1562-1625)
[»] scaffold0159 (1 HSPs)
scaffold0159 (70-132)||(29000-29063)
[»] scaffold0076 (1 HSPs)
scaffold0076 (70-132)||(25751-25814)
[»] scaffold0019 (1 HSPs)
scaffold0019 (70-132)||(116668-116731)
[»] scaffold0014 (1 HSPs)
scaffold0014 (70-132)||(76552-76615)
[»] scaffold0059 (1 HSPs)
scaffold0059 (92-133)||(16573-16614)
[»] scaffold0336 (1 HSPs)
scaffold0336 (92-132)||(8763-8803)
[»] scaffold0147 (1 HSPs)
scaffold0147 (92-132)||(6753-6793)
[»] scaffold0515 (1 HSPs)
scaffold0515 (161-195)||(7513-7547)
[»] scaffold0426 (1 HSPs)
scaffold0426 (161-195)||(2541-2575)
[»] scaffold0306 (1 HSPs)
scaffold0306 (161-195)||(7523-7557)
[»] scaffold0152 (1 HSPs)
scaffold0152 (161-195)||(25134-25168)


Alignment Details
Target: chr2 (Bit Score: 167; Significance: 1e-89; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 492663 - 492889
Alignment:
Q  1 aatacgttttggaaccaaagaacaggtagcacacttttggagatttttgggtt-----gaaagatggcatttctagagagaaacagaaatcaagatgtta 95  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||||     ||||||||||||||||||||||||||| |||||||| |||||    
T  492663 aatacgttttggaaccaaagaacaggtagcacacttttgaagatttctgggttttagagaaagatggcatttctagagagaaacacaaatcaaggtgtta 492762  T
Q  96 ggagtagattctaaccaagatttgttgagacatcatgagttttagtttctgtggagacgatatacaatatttacttttgattgatagaaaaatactacat 195  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  492763 ggagtagattctacccaagatttgttgagacatcatgagttttagtctctatggagacgatatacaatacttacttttgattgatagaaaaatactacat 492862  T
Q  196 taaaatgaatgtgtgctacctgttctt 222  Q
     |||||||| |||||||||||||||||    
T  492863 caaaatgaaagtgtgctacctgttctt 492889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 195
Target Start/End: Complemental strand, 13162784 - 13162737
Alignment:
Q  148 ggagacgatatacaatatttacttttgattgatagaaaaatactacat 195  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13162784 ggagacgatatacaatacttacttttgattgatagaaaaatactacat 13162737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 8687842 - 8687774
Alignment:
Q  65 tttctagagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    |||||||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  8687842 tttctagagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 8687774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 492906 - 492870
Alignment:
Q  1 aatacgttttggaaccaaagaacaggtagcacacttt 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  492906 aatacgttttggaaccaaagaacaggtagcacacttt 492870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 5784688 - 5784625
Alignment:
Q  70 agagagaaacagaaatcaag-atgttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  5784688 agagagaaacacaaagcaaggaagttaggagtagattcaagccaagatttgttgagacatcatg 5784625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 9787253 - 9787206
Alignment:
Q  86 caagatgttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    |||||||||||||||||||||| | ||||||||||||||| |||||||    
T  9787253 caagatgttaggagtagattcttatcaagatttgttgagatatcatga 9787206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 17784694 - 17784749
Alignment:
Q  148 ggagacgatatacaa-tatttacttttgattgatagaaaaatactacattaaaatg 202  Q
    |||||||||||| || || |||||||||||||||||||||||||||||| ||||||    
T  17784694 ggagacgatatataaatacttacttttgattgatagaaaaatactacatcaaaatg 17784749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 29223713 - 29223776
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  29223713 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 29223776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 29337012 - 29337075
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  29337012 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 29337075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 36040426 - 36040363
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  36040426 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 36040363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 195
Target Start/End: Original strand, 37439738 - 37439785
Alignment:
Q  148 ggagacgatatacaatatttacttttgattgatagaaaaatactacat 195  Q
    |||||||||||| || | ||||||||||||||||||||||||||||||    
T  37439738 ggagacgatataaaacacttacttttgattgatagaaaaatactacat 37439785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 42702370 - 42702307
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  42702370 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 42702307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 21159985 - 21160027
Alignment:
Q  91 tgttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  21159985 tgttaggagtagattcttatcaagatttgttgagacatcatga 21160027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 21160714 - 21160770
Alignment:
Q  144 ctgtggagacgatataca-----atatttacttttgattgatagaaaaatactacat 195  Q
    ||||||||||||||||||     ||| ||||||||||||||||||||||||||||||    
T  21160714 ctgtggagacgatatacacaaaaatacttacttttgattgatagaaaaatactacat 21160770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 133
Target Start/End: Complemental strand, 24663295 - 24663231
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    ||||||||||| ||| |||| | ||||||||||| |||  |||||||||||||||||||||||||    
T  24663295 agagagaaacacaaagcaaggttgttaggagtagtttcataccaagatttgttgagacatcatga 24663231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 36557663 - 36557623
Alignment:
Q  92 gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  36557663 gttaggagtagattcaacccaagatttgttgagacatcatg 36557623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 43991552 - 43991592
Alignment:
Q  92 gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  43991552 gttaggagtagattcaagccaagatttgttgagacatcatg 43991592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 23925195 - 23925132
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | | |||||||||||||||||||||    
T  23925195 agagagaaacacaaagcaaggtagttaggagtagattcaagcgaagatttgttgagacatcatg 23925132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 32522927 - 32522990
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | ||||||||| |||||||||||||    
T  32522927 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttattgagacatcatg 32522990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 195
Target Start/End: Original strand, 41978350 - 41978384
Alignment:
Q  161 aatatttacttttgattgatagaaaaatactacat 195  Q
    |||| ||||||||||||||||||||||||||||||    
T  41978350 aatacttacttttgattgatagaaaaatactacat 41978384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 13230510 - 13230441
Alignment:
Q  65 tttctagagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    |||||||||||||||| ||| |||| | |||| |||||||||| | ||||||||  ||||||||||||||    
T  13230510 tttctagagagaaacacaaagcaaggtagttatgagtagattcaacccaagattcattgagacatcatga 13230441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 31758272 - 31758336
Alignment:
Q  70 agagagaaacagaaatcaaga-tgttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    |||||||||||  || ||||| |||||| ||| ||||||  ||||||||||||||||||||||||    
T  31758272 agagagaaacatgaagcaagagtgttagaagtggattctttccaagatttgttgagacatcatga 31758336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 9e-51; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 36080144 - 36080285
Alignment:
Q  1 aatacgttttggaaccaaagaacaggtagcacacttttggagatttttgggtt-----gaaagatggcatttctagagagaaacagaaatcaagatgtta 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||| ||| |||| |||||    
T  36080144 aatacgttttggaaccaaagaacaggtagcacacttttggagatttttgggttttagagaaagatggcatttctagagagaaacacaaagcaaggtgtta 36080243  T
Q  96 ggagtagattctaaccaagatttgttgagacatcatgagttt 137  Q
    ||||||||||||| |||||| |||||||||||||||||||||    
T  36080244 ggagtagattctatccaagacttgttgagacatcatgagttt 36080285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 15161088 - 15161164
Alignment:
Q  57 agatggcatttctagagagaaacagaaatcaagatgttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    |||||||||||||||||||||||| ||| |||||| |||||||||||||||  ||||||||||||||||||||||||    
T  15161088 agatggcatttctagagagaaacacaaagcaagatattaggagtagattcttcccaagatttgttgagacatcatga 15161164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 15162161 - 15162212
Alignment:
Q  144 ctgtggagacgatatacaatatttacttttgattgatagaaaaatactacat 195  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  15162161 ctgtggagacgatatacaatacttactttcgattgatagaaaaatactacat 15162212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 195
Target Start/End: Original strand, 36084497 - 36084543
Alignment:
Q  149 gagacgatatacaatatttacttttgattgatagaaaaatactacat 195  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  36084497 gagacgatatacaatacttacttttgattgatagaaaaatactacat 36084543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 3365651 - 3365608
Alignment:
Q  144 ctgtggagacgatatacaatatttacttttgattgatagaaaaa 187  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  3365651 ctgtggagacgatatacaatacttacttttgattgatagaaaaa 3365608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 9293152 - 9293207
Alignment:
Q  147 tggagacgatatacaatatttacttttgattgatagaaaaatactacattaaaatg 202  Q
    |||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||    
T  9293152 tggagacgatatacaatacttacttttgattgaaagaaaaatattacatcaaaatg 9293207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 16129657 - 16129720
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||||| ||||||||||||||| | |||||||||||||||||||||||    
T  16129657 agagagaaacacaaagcaagatagttaggagtagattcaagccaagatttgttgagacatcatg 16129720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 8996423 - 8996363
Alignment:
Q  72 agagaaacagaaatcaagatgttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||| ||| |||| |||||||||||||||| | ||||||||||||| |||||||||    
T  8996423 agagaaacacaaagcaaggtgttaggagtagattcaacccaagatttgttgcgacatcatg 8996363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 13218209 - 13218146
Alignment:
Q  70 agagagaaacagaaatcaagatg-ttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| || |||||||||||||| | |||||||||||||||||||||||    
T  13218209 agagagaaacacaaagcaaggtggttaggagtagattcaagccaagatttgttgagacatcatg 13218146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 33492362 - 33492299
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  33492362 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 33492299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 38122096 - 38122033
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  38122096 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 38122033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 39001345 - 39001282
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  39001345 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 39001282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 41000267 - 41000204
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  41000267 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 41000204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 8995687 - 8995633
Alignment:
Q  144 ctgtggagacgatatacaa---tatttacttttgattgatagaaaaatactacat 195  Q
    |||||||||||||| ||||   || ||||||||||||||||||||||||||||||    
T  8995687 ctgtggagacgatacacaaaaatacttacttttgattgatagaaaaatactacat 8995633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 9667836 - 9667796
Alignment:
Q  92 gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  9667836 gttaggagtagattcaagccaagatttgttgagacatcatg 9667796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 16832923 - 16832883
Alignment:
Q  92 gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  16832923 gttaggagtagattcaagccaagatttgttgagacatcatg 16832883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 49249093 - 49249133
Alignment:
Q  92 gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  49249093 gttaggagtagattcaagccaagatttgttgagacatcatg 49249133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 12168380 - 12168317
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | |||||| |||||||| | |||||||||||||||||||||||    
T  12168380 agagagaaacacaaagcaaggtagttaggtgtagattcaagccaagatttgttgagacatcatg 12168317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 44505434 - 44505371
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||| ||||||||||||||||||    
T  44505434 agagagaaacacaaagcaaggtagttaggagtagattcaagccaaaatttgttgagacatcatg 44505371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 133
Target Start/End: Complemental strand, 432481 - 432440
Alignment:
Q  92 gttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    |||||||||||| || | ||||||||||||||||||||||||    
T  432481 gttaggagtagactcaagccaagatttgttgagacatcatga 432440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 7612464 - 7612389
Alignment:
Q  61 ggcatttctaga--gagaaacagaaatcaaga-tgttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    ||||||||||||  ||||||||  || ||||| |||||| ||| ||||||  ||||||||||||||||||||||||    
T  7612464 ggcatttctagagagagaaacatgaagcaagagtgttagaagtggattctttccaagatttgttgagacatcatga 7612389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 11738962 - 11738898
Alignment:
Q  69 tagagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    |||||||||||| ||| |||| | |||||||||| |||| | |||||||||||||| ||||||||    
T  11738962 tagagagaaacacaaagcaaggtagttaggagtaaattcaagccaagatttgttgacacatcatg 11738898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 16130234 - 16130274
Alignment:
Q  92 gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||||||| |  ||||||||||||||||||||||    
T  16130234 gttaggagtagattcaagtcaagatttgttgagacatcatg 16130274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 2357146 - 2357224
Alignment:
Q  57 agatggcatttctagagagaaacagaaatcaagatgttaggagtagattctaaccaagatttgttgagacatcatgagt 135  Q
    ||||| |||||||| ||||||||| ||| ||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  2357146 agatgacatttctatagagaaacacaaagcaagatgttaggagtagattcaacccaagatttgttgagacatcatgagt 2357224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 64 - 137
Target Start/End: Original strand, 49434089 - 49434162
Alignment:
Q  64 atttctagagagaaacagaaatcaagatgttaggagtagattctaaccaagatttgttgagacatcatgagttt 137  Q
    ||||||||||||||||| ||| |||| |||||||||||||||||| |||||||||||||||| || ||||||||    
T  49434089 atttctagagagaaacacaaagcaaggtgttaggagtagattctacccaagatttgttgagatattatgagttt 49434162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 24899356 - 24899305
Alignment:
Q  144 ctgtggagacgatatacaatatttacttttgattgatagaaaaatactacat 195  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24899356 ctgtggagacgatatacaatacttacttttgattgatagaaaaatactacat 24899305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 24905822 - 24905771
Alignment:
Q  144 ctgtggagacgatatacaatatttacttttgattgatagaaaaatactacat 195  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24905822 ctgtggagacgatatacaatacttacttttgattgatagaaaaatactacat 24905771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 1232672 - 1232591
Alignment:
Q  57 agatggcatttctagagagaaacagaaatcaagat-----gttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    ||||| |||||||||||||||||| ||| ||| ||     |||||||||||||||| | |||||||||||||||||||||||    
T  1232672 agatgacatttctagagagaaacacaaagcaaaataaggtgttaggagtagattcttatcaagatttgttgagacatcatga 1232591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 33247986 - 33248050
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    ||||||||||| ||| |||| | ||||||||||||||| | ||||||||||||||||||||||||    
T  33247986 agagagaaacacaaagcaaggtagttaggagtagattcaacccaagatttgttgagacatcatga 33248050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 45527644 - 45527708
Alignment:
Q  69 tagagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    |||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  45527644 tagagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 45527708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 3588398 - 3588461
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  3588398 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 3588461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 7653386 - 7653323
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  7653386 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 7653323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 8615501 - 8615564
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  8615501 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 8615564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 9989394 - 9989457
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  9989394 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 9989457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 10386234 - 10386171
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  10386234 agagagaaacacaaagcaaggtagttaggagtagattcgagccaagatttgttgagacatcatg 10386171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 20963817 - 20963754
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  20963817 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 20963754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 23385394 - 23385457
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  23385394 agagagaaacaaaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 23385457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 27030847 - 27030784
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  27030847 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 27030784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 1231918 - 1231863
Alignment:
Q  144 ctgtggagacgatataca----atatttacttttgattgatagaaaaatactacat 195  Q
    ||||||||||||||||||    ||| ||||||||||||||||||||||||||||||    
T  1231918 ctgtggagacgatatacacaaaatacttacttttgattgatagaaaaatactacat 1231863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 20837115 - 20837155
Alignment:
Q  92 gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  20837115 gttaggagtagattcaagccaagatttgttgagacatcatg 20837155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 22097688 - 22097728
Alignment:
Q  92 gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  22097688 gttaggagtagattcaagccaagatttgttgagacatcatg 22097728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 23194654 - 23194710
Alignment:
Q  144 ctgtggagacgatataca-----atatttacttttgattgatagaaaaatactacat 195  Q
    ||||||||||||||||||     ||| ||||||||||||||||||||||||||||||    
T  23194654 ctgtggagacgatatacacaaaaatacttacttttgattgatagaaaaatactacat 23194710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 26335102 - 26335181
Alignment:
Q  59 atggcatttctagagagaaa--cagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatgagt 135  Q
    ||||| ||||||||||||||  || ||| |||| | |||| |||||||||| | ||||||||||||||||||||||||||    
T  26335102 atggcttttctagagagaaaaacacaaagcaaggtagttaagagtagattcaacccaagatttgttgagacatcatgagt 26335181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 27850691 - 27850651
Alignment:
Q  92 gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  27850691 gttaggagtagattcaagccaagatttgttgagacatcatg 27850651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 36469576 - 36469536
Alignment:
Q  92 gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  36469576 gttaggagtagattcaagccaagatttgttgagacatcatg 36469536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 52308249 - 52308186
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||||| |||| ||||||| ||||||||||    
T  52308249 agagagaaacacaaagcaaggtagttaggagtagattctagccaatatttgtttagacatcatg 52308186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 195
Target Start/End: Original strand, 3589156 - 3589190
Alignment:
Q  161 aatatttacttttgattgatagaaaaatactacat 195  Q
    |||| ||||||||||||||||||||||||||||||    
T  3589156 aatacttacttttgattgatagaaaaatactacat 3589190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 48168334 - 48168296
Alignment:
Q  92 gttaggagtagattctaaccaagatttgttgagacatca 130  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  48168334 gttaggagtagattcaagccaagatttgttgagacatca 48168296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 23193908 - 23193985
Alignment:
Q  57 agatggcatttctagagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    ||||||||||| |||||||||||| ||  |||| | |||| |||||||||| | ||||||||  ||||||||||||||    
T  23193908 agatggcatttttagagagaaacacaaggcaaggtagttaagagtagattcaacccaagattcattgagacatcatga 23193985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 545832 - 545792
Alignment:
Q  155 atatacaatatttacttttgattgatagaaaaatactacat 195  Q
    |||||||||| |||||||  |||||||||||||||||||||    
T  545832 atatacaatacttactttatattgatagaaaaatactacat 545792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 2785669 - 2785633
Alignment:
Q  161 aatatttacttttgattgatagaaaaatactacatta 197  Q
    |||| |||||||| |||||||||||||||||||||||    
T  2785669 aatacttactttttattgatagaaaaatactacatta 2785633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 35461 - 35381
Alignment:
Q  54 gaaagatggcatttctagagagaaacagaaatcaagatgttaggagtagattctaaccaagatttgttgagacatcatgagt 135  Q
    |||||||||||||||||| |||||||| ||| |||| |||||||||||||||||| ||||||||||||||||||| ||||||    
T  35461 gaaagatggcatttctag-gagaaacacaaagcaaggtgttaggagtagattctacccaagatttgttgagacattatgagt 35381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 34749 - 34693
Alignment:
Q  144 ctgtggagacgatataca-----atatttacttttgattgatagaaaaatactacat 195  Q
    ||||||||||||||||||     ||| ||||||||||||||||||||||||||||||    
T  34749 ctgtggagacgatatacacaaaaatacttacttttgattgatagaaaaatactacat 34693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 4e-22; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 135
Target Start/End: Original strand, 1454786 - 1454859
Alignment:
Q  62 gcatttctagagagaaacagaaatcaagatgttaggagtagattctaaccaagatttgttgagacatcatgagt 135  Q
    ||||||||| ||||||||| ||| |||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  1454786 gcatttctatagagaaacacaaagcaaggtgttaggagtagattctacccaagatttgttgagacatcatgagt 1454859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 135
Target Start/End: Original strand, 1466478 - 1466551
Alignment:
Q  62 gcatttctagagagaaacagaaatcaagatgttaggagtagattctaaccaagatttgttgagacatcatgagt 135  Q
    ||||||||| ||||||||| ||| |||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  1466478 gcatttctatagagaaacacaaagcaaggtgttaggagtagattctacccaagatttgttgagacatcatgagt 1466551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 57 - 131
Target Start/End: Original strand, 14270657 - 14270731
Alignment:
Q  57 agatggcatttctagagagaaacagaaatcaagatgttaggagtagattctaaccaagatttgttgagacatcat 131  Q
    ||||| |||||||||||||||||| ||| |||| |||||||||||||||| | ||||||||||||||||||||||    
T  14270657 agatgacatttctagagagaaacacaaagcaaggtgttaggagtagattcaacccaagatttgttgagacatcat 14270731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 9517871 - 9517821
Alignment:
Q  145 tgtggagacgatatacaatatttacttttgattgatagaaaaatactacat 195  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9517871 tgtggagacgatatacaatacttacttttgattgatagaaaaatactacat 9517821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 57 - 140
Target Start/End: Complemental strand, 9518620 - 9518537
Alignment:
Q  57 agatggcatttctagagagaaacagaaatcaagatgttaggagtagattctaaccaagatttgttgagacatcatgagttttag 140  Q
    ||||| |||||||||||||||||| |||   ||||||||| |||||||||| |  |||||||||||||||||||||| ||||||    
T  9518620 agatgacatttctagagagaaacacaaaatgagatgttagaagtagattcttatgaagatttgttgagacatcatgaattttag 9518537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 135
Target Start/End: Complemental strand, 13173987 - 13173914
Alignment:
Q  62 gcatttctagagagaaacagaaatcaagatgttaggagtagattctaaccaagatttgttgagacatcatgagt 135  Q
    ||||||||| ||| ||||| |||  ||| |||||||||||||||||| |||||||||||||||| |||||||||    
T  13173987 gcatttctatagaaaaacacaaagtaaggtgttaggagtagattctacccaagatttgttgagatatcatgagt 13173914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 135
Target Start/End: Complemental strand, 13182520 - 13182447
Alignment:
Q  62 gcatttctagagagaaacagaaatcaagatgttaggagtagattctaaccaagatttgttgagacatcatgagt 135  Q
    ||||||||| ||| ||||| |||  ||| |||||||||||||||||| |||||||||||||||| |||||||||    
T  13182520 gcatttctatagaaaaacacaaagtaaggtgttaggagtagattctacccaagatttgttgagatatcatgagt 13182447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 15642436 - 15642478
Alignment:
Q  91 tgttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  15642436 tgttaggagtagattcttaccaagatttgttgagacatcatga 15642478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 34006502 - 34006563
Alignment:
Q  72 agagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||| ||| |||| | ||||||||||||||| |||||||||||||||||||||||||    
T  34006502 agagaaacacaaagcaaggtagttaggagtagattcaaaccaagatttgttgagacatcatg 34006563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 14479558 - 14479622
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    ||||||||||| ||| |||| | ||||||||||||||| | ||||||||||||||||||||||||    
T  14479558 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatga 14479622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 34913449 - 34913505
Alignment:
Q  72 agagaaacagaaatcaagatgttaggagtagattctaaccaagatttgttgagacat 128  Q
    ||||||||| ||| |||| |||||||||||||||| | |||||||||||||||||||    
T  34913449 agagaaacacaaagcaaggtgttaggagtagattcaacccaagatttgttgagacat 34913505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 3539045 - 3539108
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  3539045 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 3539108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 5989166 - 5989103
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  5989166 agagagaaacacaaagcaaggtagttaggagtagattcaacccaagatttgttgagacatcatg 5989103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 26510476 - 26510413
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  26510476 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 26510413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 26515592 - 26515529
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  26515592 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 26515529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 32806926 - 32806863
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  32806926 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 32806863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 25976940 - 25977011
Alignment:
Q  60 tggcatttctagagagaaacagaaatcaagatgttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    |||||||||||||||  |||| ||| |||| |||||||||||||||| | ||||||||  ||||||||||||||    
T  25976940 tggcatttctagaga--aacacaaagcaaggtgttaggagtagattcaacccaagattcattgagacatcatga 25977011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 34007185 - 34007247
Alignment:
Q  138 tagtttctgtggagacgatataca-----atatttacttttgattgatagaaaaatactacat 195  Q
    |||| |||||||||||||||||||     ||| ||||||||||||||||||||||||||||||    
T  34007185 tagtctctgtggagacgatatacacaaaaatacttacttttgattgatagaaaaatactacat 34007247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 21631942 - 21631983
Alignment:
Q  161 aatatttacttttgattgatagaaaaatactacattaaaatg 202  Q
    |||| |||||||||||||||||||||||||||||| ||||||    
T  21631942 aatacttacttttgattgatagaaaaatactacatcaaaatg 21631983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 25977706 - 25977747
Alignment:
Q  161 aatatttacttttgattgatagaaaaatactacattaaaatg 202  Q
    |||| |||||||||||||||||||||||||||||| ||||||    
T  25977706 aatacttacttttgattgatagaaaaatactacatcaaaatg 25977747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 14271407 - 14271463
Alignment:
Q  144 ctgtggagacgatataca-----atatttacttttgattgatagaaaaatactacat 195  Q
    ||||||||||||||||||     ||| ||||||||||||||||||||||||||||||    
T  14271407 ctgtggagacgatatacacaaaaatacttacttttgattgatagaaaaatactacat 14271463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 26604337 - 26604401
Alignment:
Q  70 agagagaaacagaaatcaaga-tgttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    ||||||||||| ||| ||||  |||||| ||||||||||  ||||||||||||||||||||||||    
T  26604337 agagagaaacacaaagcaagggtgttagaagtagattcttcccaagatttgttgagacatcatga 26604401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 34914424 - 34914480
Alignment:
Q  144 ctgtggagacgatataca-----atatttacttttgattgatagaaaaatactacat 195  Q
    ||||||||||||||||||     ||| ||||||||||||||||||||||||||||||    
T  34914424 ctgtggagacgatatacacaaaaatacttacttttgattgatagaaaaatactacat 34914480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 9932969 - 9932906
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| |  ||||||||||||||||||||||    
T  9932969 agagagaaacacaaaacaaggtagttaggagtagattcaaggcaagatttgttgagacatcatg 9932906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 21596672 - 21596633
Alignment:
Q  92 gttaggagtagattctaaccaagatttgttgagacatcat 131  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  21596672 gttaggagtagattcaagccaagatttgttgagacatcat 21596633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 24161419 - 24161356
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | | |||||||||||||||||||||    
T  24161419 agagagaaacacaaagcaaggtagttaggagtagattcaagcaaagatttgttgagacatcatg 24161356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 195
Target Start/End: Original strand, 1455548 - 1455582
Alignment:
Q  161 aatatttacttttgattgatagaaaaatactacat 195  Q
    |||| ||||||||||||||||||||||||||||||    
T  1455548 aatacttacttttgattgatagaaaaatactacat 1455582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 195
Target Start/End: Original strand, 1467240 - 1467274
Alignment:
Q  161 aatatttacttttgattgatagaaaaatactacat 195  Q
    |||| ||||||||||||||||||||||||||||||    
T  1467240 aatacttacttttgattgatagaaaaatactacat 1467274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 195
Target Start/End: Complemental strand, 13181761 - 13181727
Alignment:
Q  161 aatatttacttttgattgatagaaaaatactacat 195  Q
    |||| ||||||||||||||||||||||||||||||    
T  13181761 aatacttacttttgattgatagaaaaatactacat 13181727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 21631170 - 21631241
Alignment:
Q  62 gcatttctagagagaaacagaaatcaagat-gttaggagtagattctaac-caagatttgttgagacatcatg 132  Q
    |||||| |||||||||||| ||| |||| | |||| ||||||||| |||| ||||||||||||||||||||||    
T  21631170 gcatttttagagagaaacataaagcaaggtagttaagagtagatt-taacacaagatttgttgagacatcatg 21631241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 24878863 - 24878927
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    ||||||||||| ||| |||| | ||||||||||||||| | ||||||||  ||||||||||||||    
T  24878863 agagagaaacacaaaacaaggtagttaggagtagattcaacccaagattcattgagacatcatga 24878927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 135
Target Start/End: Complemental strand, 1154 - 1082
Alignment:
Q  63 catttctagagagaaacagaaatcaagatgttaggagtagattctaaccaagatttgttgagacatcatgagt 135  Q
    |||||||||||||||||| |||  ||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  1154 catttctagagagaaacacaaagtaaggtgttaggagtagattctatccaagatttgttgagacatcatgagt 1082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 196
Target Start/End: Complemental strand, 388 - 353
Alignment:
Q  161 aatatttacttttgattgatagaaaaatactacatt 196  Q
    |||| |||||||||||||||||||||||||||||||    
T  388 aatacttacttttgattgatagaaaaatactacatt 353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 29032960 - 29032882
Alignment:
Q  57 agatggcatttctagagagaaacagaaatcaagatgttaggagtagattctaaccaagatttgttgagacatcatgagt 135  Q
    |||||||||||||| ||||||||| |||  ||| ||||||||||||||||||  |||||||||||||||||||||||||    
T  29032960 agatggcatttctatagagaaacacaaagtaaggtgttaggagtagattctattcaagatttgttgagacatcatgagt 29032882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 191
Target Start/End: Original strand, 22909852 - 22909899
Alignment:
Q  144 ctgtggagacgatatacaatatttacttttgattgatagaaaaatact 191  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  22909852 ctgtggagatgatatacaatacttacttttgattgatagaaaaatact 22909899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 22909108 - 22909178
Alignment:
Q  60 tggcatttctagagagaaacagaaatcaagatgttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    |||||||||||||||  |||| ||| |||| |||||||||||||||| | | |||||||||||||||||||||    
T  22909108 tggcatttctagaga--aacacaaagcaaggtgttaggagtagattcaatctaagatttgttgagacatcatg 22909178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 2477656 - 2477719
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  2477656 agagagaaacacaaagcaaggtagttaggagtagattcaacccaagatttgttgagacatcatg 2477719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 2631394 - 2631457
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  2631394 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 2631457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 8108052 - 8107989
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  8108052 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 8107989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 10346469 - 10346406
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  10346469 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 10346406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 12190841 - 12190904
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  12190841 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 12190904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 19472427 - 19472364
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  19472427 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 19472364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 31158440 - 31158377
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  31158440 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 31158377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 31664658 - 31664595
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  31664658 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 31664595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 33160180 - 33160243
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  33160180 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 33160243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 70 - 131
Target Start/End: Original strand, 6172525 - 6172587
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcat 131  Q
    ||||||||||| ||| |||| | ||||||||||||||| | ||||||||||||||||||||||    
T  6172525 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcat 6172587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 70 - 131
Target Start/End: Original strand, 12183864 - 12183926
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcat 131  Q
    ||||||||||| ||| |||| | ||||||||||||||| | ||||||||||||||||||||||    
T  12183864 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcat 12183926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 3545021 - 3544981
Alignment:
Q  92 gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  3545021 gttaggagtagattcaacccaagatttgttgagacatcatg 3544981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 195
Target Start/End: Original strand, 7413186 - 7413222
Alignment:
Q  159 acaatatttacttttgattgatagaaaaatactacat 195  Q
    |||||| ||||||||||||||||||||||||||||||    
T  7413186 acaatacttacttttgattgatagaaaaatactacat 7413222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 22321941 - 22321901
Alignment:
Q  92 gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  22321941 gttaggagtagattcaagccaagatttgttgagacatcatg 22321901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 22818433 - 22818473
Alignment:
Q  92 gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  22818433 gttaggagtagattcaagccaagatttgttgagacatcatg 22818473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 23795115 - 23795155
Alignment:
Q  92 gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  23795115 gttaggagtagattcaagccaagatttgttgagacatcatg 23795155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 12090624 - 12090561
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | |||||||||| |||| | |||||||||||||||||||||||    
T  12090624 agagagaaacacaaagcaaggtagttaggagtaaattcaagccaagatttgttgagacatcatg 12090561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 195
Target Start/End: Complemental strand, 29032197 - 29032163
Alignment:
Q  161 aatatttacttttgattgatagaaaaatactacat 195  Q
    |||| ||||||||||||||||||||||||||||||    
T  29032197 aatacttacttttgattgatagaaaaatactacat 29032163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 131
Target Start/End: Complemental strand, 45500874 - 45500812
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcat 131  Q
    ||||||||||| ||| |||| | |||| |||||||||| | ||||||||||||||||||||||    
T  45500874 agagagaaacacaaagcaaggtagttatgagtagattcaagccaagatttgttgagacatcat 45500812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 132
Target Start/End: Original strand, 1274575 - 1274648
Alignment:
Q  57 agatggcatttctagagagaaacagaaatcaagatgttaggagtagattctaac-caagatttgttgagacatcatg 132  Q
    ||||||||||||||||||  |||| |||  ||| ||||| ||||||||| |||| ||||||||||||||||||||||    
T  1274575 agatggcatttctagaga--aacacaaagtaaggtgttatgagtagatt-taactcaagatttgttgagacatcatg 1274648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 2797728 - 2797663
Alignment:
Q  69 tagagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    |||||||||||| ||| |||| | ||||||||||||||| | ||||||||  ||||||||||||||    
T  2797728 tagagagaaacacaaaacaaggtagttaggagtagattcaacccaagattcattgagacatcatga 2797663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 27951557 - 27951484
Alignment:
Q  61 ggcatttctagagagaaacagaaatcaaga-tgttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    ||||||||||||||||||||  || ||||| |||||| ||| ||||||  |||||||||||| | |||||||||    
T  27951557 ggcatttctagagagaaacatgaagcaagagtgttagaagtggattctttccaagatttgtttaaacatcatga 27951484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 1953978 - 1954018
Alignment:
Q  92 gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||||||| | |||||||||||| ||||||||||    
T  1953978 gttaggagtagattcaagccaagatttgttaagacatcatg 1954018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 19063514 - 19063574
Alignment:
Q  72 agagaaacagaaatcaagatgttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||| |||  ||| |||||||||||||||| | | || ||||||||||||||||||    
T  19063514 agagaaacacaaagtaaggtgttaggagtagattcaacctaaaatttgttgagacatcatg 19063574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 31878599 - 31878663
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    ||||||||||| ||| |||| | ||||||||||||||| | ||||||||  ||||||||||||||    
T  31878599 agagagaaacacaaagcaaggtagttaggagtagattcaacccaagattcattgagacatcatga 31878663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 6e-18; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 39656255 - 39656138
Alignment:
Q  22 acaggtagcacacttttggagatttttgggtt------gaaagatggcatttctagagagaaacagaaatcaagatgttaggagtagattctaaccaaga 115  Q
    ||||||| |||| |||||||||||||||| ||      |||||||| |||||||||||||||||| ||   ||| ||||||||||||||||||   ||||    
T  39656255 acaggtatcacatttttggagatttttggtttcttggagaaagatgacatttctagagagaaacacaacgtaaggtgttaggagtagattctacaaaaga 39656156  T
Q  116 tttgttgagacatcatga 133  Q
    ||||||||||||||||||    
T  39656155 tttgttgagacatcatga 39656138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 39655532 - 39655484
Alignment:
Q  147 tggagacgatatacaatatttacttttgattgatagaaaaatactacat 195  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  39655532 tggagacgatatacaatacttacttttgattgatagaaaaatactacat 39655484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 7314963 - 7315026
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  7314963 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 7315026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 9404422 - 9404485
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  9404422 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 9404485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 11723440 - 11723377
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  11723440 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 11723377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 11766753 - 11766816
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  11766753 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 11766816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 31845978 - 31846041
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  31845978 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 31846041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 33434601 - 33434664
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  33434601 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 33434664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 34456295 - 34456358
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  34456295 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 34456358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 132
Target Start/End: Complemental strand, 34869921 - 34869847
Alignment:
Q  61 ggcatttctaga--gagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||||  |||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  34869921 ggcatttctagagagagaaacacaaaacaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 34869847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 14344490 - 14344530
Alignment:
Q  92 gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  14344490 gttaggagtagattcaagccaagatttgttgagacatcatg 14344530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 19853731 - 19853775
Alignment:
Q  148 ggagacgatatacaatatttacttttgattgatagaaaaatacta 192  Q
    |||||| |||||||||| |||||||| ||||||||||||||||||    
T  19853731 ggagacaatatacaatacttacttttaattgatagaaaaatacta 19853775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 32226833 - 32226893
Alignment:
Q  72 agagaaacagaaatcaagatgttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||| ||| |||| |||||||||||||||| | | || ||||||||||||||||||    
T  32226833 agagaaacacaaagcaaggtgttaggagtagattcaacctaaaatttgttgagacatcatg 32226893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 16904773 - 16904710
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | |||||| |||||||| | |||||||||||||||||||||||    
T  16904773 agagagaaacacaaagcaaggtagttaggggtagattcaagccaagatttgttgagacatcatg 16904710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 24835733 - 24835796
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| |||||||| | ||||||||||||||| |  || |||||||||||||||||||    
T  24835733 agagagaaacacaaatcaaggtagttaggagtagattcaagtcaggatttgttgagacatcatg 24835796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 27167261 - 27167198
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | ||||||||||||| |||||||||    
T  27167261 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgggacatcatg 27167198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 30607240 - 30607177
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||| ||||||||||||||||||    
T  30607240 agagagaaacacaaagcaaggtagttaggagtagattcaagccaatatttgttgagacatcatg 30607177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 37251330 - 37251275
Alignment:
Q  145 tgtggagacgatataca-----atatttacttttgattgatagaaaaatactacat 195  Q
    |||||||||||||||||     ||| ||||||||||||||||||||||||||||||    
T  37251330 tgtggagacgatatacacaaaaatacttacttttgattgatagaaaaatactacat 37251275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 135
Target Start/End: Complemental strand, 37252065 - 37252002
Alignment:
Q  72 agagaaacagaaatcaagatgttaggagtagattctaaccaagatttgttgagacatcatgagt 135  Q
    ||||| ||| ||| |||| ||||||| |||||||| | ||||||||| ||||||||||||||||    
T  37252065 agagagacacaaaacaaggtgttaggtgtagattcaacccaagatttattgagacatcatgagt 37252002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 195
Target Start/End: Complemental strand, 3664032 - 3663998
Alignment:
Q  161 aatatttacttttgattgatagaaaaatactacat 195  Q
    |||| ||||||||||||||||||||||||||||||    
T  3664032 aatacttacttttgattgatagaaaaatactacat 3663998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 195
Target Start/End: Complemental strand, 34738172 - 34738124
Alignment:
Q  148 ggagacgatatacaa-tatttacttttgattgatagaaaaatactacat 195  Q
    |||||||||||| || || |||||| |||||||||||||||||||||||    
T  34738172 ggagacgatatataaatacttacttctgattgatagaaaaatactacat 34738124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 6e-18; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 33110120 - 33110070
Alignment:
Q  145 tgtggagacgatatacaatatttacttttgattgatagaaaaatactacat 195  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33110120 tgtggagacgatatacaatacttacttttgattgatagaaaaatactacat 33110070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 323436 - 323499
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||||| ||||||||||||||| | |||||||||||||||||||||||    
T  323436 agagagaaacacaaagcaagatagttaggagtagattcaagccaagatttgttgagacatcatg 323499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 40995713 - 40995650
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| |||||||| | ||||||||||||||| | |||||||||||||||||||||||    
T  40995713 agagagaaacacaaatcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 40995650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 33110880 - 33110803
Alignment:
Q  57 agatggcatttctagagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    ||||| |||||||||||||||||| ||  |||| | |||| |||||||||| | ||||||||||||||||||||||||    
T  33110880 agatgacatttctagagagaaacacaaggcaaggtagttaagagtagattcaacccaagatttgttgagacatcatga 33110803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 4839300 - 4839237
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  4839300 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 4839237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 5273715 - 5273652
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  5273715 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 5273652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 35416847 - 35416784
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| |||  ||||| ||||||||||||||| | |||||||||||||||||||||||    
T  35416847 agagagaaacacaaagaaagatagttaggagtagattcaagccaagatttgttgagacatcatg 35416784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 133
Target Start/End: Complemental strand, 46692177 - 46692136
Alignment:
Q  92 gttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    ||||||||||||||| | ||||||||||||||||||||||||    
T  46692177 gttaggagtagattcaagccaagatttgttgagacatcatga 46692136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 133
Target Start/End: Complemental strand, 19247991 - 19247927
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    ||||||||||| ||| |||| | ||| ||||||||||| |||||| |||||||||||||||||||    
T  19247991 agagagaaacacaaagcaaggtagttgggagtagattcaaaccaatatttgttgagacatcatga 19247927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 26069723 - 26069786
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||| ||||||||| | |||||||||||||||||||||||    
T  26069723 agagagaaacacaaagcaaggtagttagaagtagattcaagccaagatttgttgagacatcatg 26069786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 133
Target Start/End: Original strand, 1187965 - 1188027
Alignment:
Q  72 agagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    ||||||||| ||| |||| | ||||||||||||||| |  |||||||||||||||||||||||    
T  1187965 agagaaacacaaagcaaggtagttaggagtagattcaagtcaagatttgttgagacatcatga 1188027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 30218555 - 30218489
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatgagt 135  Q
    ||||||||||| ||| |||| | |||| |||||||||| | ||||||||||||||||| ||||||||    
T  30218555 agagagaaacacaaagcaaggtagttaagagtagattcaacccaagatttgttgagacgtcatgagt 30218489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 8894920 - 8894993
Alignment:
Q  61 ggcatttctagagagaaacagaaatcaaga-tgttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    |||||||||||||||||||| ||  ||||  |||||| ||||||||||  ||||||||||| |||| |||||||    
T  8894920 ggcatttctagagagaaacacaatgcaagggtgttagaagtagattcttcccaagatttgtagagaaatcatga 8894993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 44432194 - 44432154
Alignment:
Q  92 gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||||||| | ||||||||| |||||||||||||    
T  44432194 gttaggagtagattcaagccaagatttcttgagacatcatg 44432154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 52618512 - 52618576
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    ||||||||||| ||| |||| | ||||||||||||||| | ||||||||  ||||||||||||||    
T  52618512 agagagaaacacaaagcaaggtagttaggagtagattcaacccaagattcattgagacatcatga 52618576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 53896115 - 53896151
Alignment:
Q  145 tgtggagacgatatacaatatttacttttgattgata 181  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  53896115 tgtggaaacgatatacaatacttacttttgattgata 53896151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 133
Target Start/End: Complemental strand, 22222828 - 22222767
Alignment:
Q  72 agagaaacagaaatcaagatgttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    ||||||||| ||| |||| |||||||||||||||||| ||||||||||||||||||||||||    
T  22222828 agagaaacacaaagcaaggtgttaggagtagattctacccaagatttgttgagacatcatga 22222767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 133
Target Start/End: Complemental strand, 22229170 - 22229109
Alignment:
Q  72 agagaaacagaaatcaagatgttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    ||||||||| ||| |||| |||||||||||||||||| ||||||||||||||||||||||||    
T  22229170 agagaaacacaaagcaaggtgttaggagtagattctacccaagatttgttgagacatcatga 22229109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 133
Target Start/End: Complemental strand, 22234012 - 22233951
Alignment:
Q  72 agagaaacagaaatcaagatgttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    ||||||||| ||| |||| |||||||||||||||||| ||||||||||||||||||||||||    
T  22234012 agagaaacacaaagcaaggtgttaggagtagattctacccaagatttgttgagacatcatga 22233951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 12538892 - 12538949
Alignment:
Q  138 tagtttctgtggagacgatatacaatatttacttttgattgatagaaaaatactacat 195  Q
    |||| |||| ||||||||||||||||| |||||||||||||||||||||||| |||||    
T  12538892 tagtctctggggagacgatatacaatacttacttttgattgatagaaaaatattacat 12538949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 11309156 - 11309088
Alignment:
Q  65 tttctagagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    |||||||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  11309156 tttctagagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 11309088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 13509954 - 13510024
Alignment:
Q  60 tggcatttctagagagaaacagaaatcaagatgttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    |||||||||||||||  |||| ||| ||||||||||| ||||||||| | | |||||||||||||||||||||    
T  13509954 tggcatttctagaga--aacacaaagcaagatgttagaagtagattcaacctaagatttgttgagacatcatg 13510024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 13599484 - 13599554
Alignment:
Q  60 tggcatttctagagagaaacagaaatcaagatgttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    |||||||||||||||  |||| ||| ||||||||||| ||||||||| | | |||||||||||||||||||||    
T  13599484 tggcatttctagaga--aacacaaagcaagatgttagaagtagattcaacctaagatttgttgagacatcatg 13599554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 3298800 - 3298863
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  3298800 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 3298863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 8743447 - 8743384
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  8743447 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 8743384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 9068331 - 9068268
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  9068331 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 9068268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 16580083 - 16580146
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  16580083 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 16580146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 22180599 - 22180662
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  22180599 agagagaaacaaaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 22180662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 22226933 - 22226872
Alignment:
Q  144 ctgtggagacgatatacaa---tatttacttttgattgatagaaaaatactacattaaaatg 202  Q
    |||||||||||||| ||||   || |||||||||||||||||||||||||||||| ||||||    
T  22226933 ctgtggagacgatacacaaaaatacttacttttgattgatagaaaaatactacatcaaaatg 22226872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 22233275 - 22233214
Alignment:
Q  144 ctgtggagacgatatacaa---tatttacttttgattgatagaaaaatactacattaaaatg 202  Q
    |||||||||||||| ||||   || |||||||||||||||||||||||||||||| ||||||    
T  22233275 ctgtggagacgatacacaaaaatacttacttttgattgatagaaaaatactacatcaaaatg 22233214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 27348024 - 27348087
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  27348024 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 27348087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 28370091 - 28370154
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  28370091 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 28370154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 28926307 - 28926244
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  28926307 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 28926244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 41577495 - 41577432
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  41577495 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 41577432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 16958548 - 16958614
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatgagt 135  Q
    ||||||||||| ||| |||| | |||| |||||||||| | ||||||||||||||||||||||||||    
T  16958548 agagagaaacacaaagcaaggtagttaagagtagattcaacccaagatttgttgagacatcatgagt 16958614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 195
Target Start/End: Original strand, 17993595 - 17993657
Alignment:
Q  138 tagtttctgtggagacgatataca-----atatttacttttgattgatagaaaaatactacat 195  Q
    ||||| ||||||||||||||||||     ||| ||||||||||||||||||||||||||||||    
T  17993595 tagttcctgtggagacgatatacacaaaaatacttacttttgattgatagaaaaatactacat 17993657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 17992879 - 17992956
Alignment:
Q  57 agatggcatttctagagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    |||||||||||||||||||||||| ||  |||| | |||| |||||||||| | ||||||||  ||||||||||||||    
T  17992879 agatggcatttctagagagaaacacaaggcaaggtagttaagagtagattcaatccaagattcattgagacatcatga 17992956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 22222102 - 22222048
Alignment:
Q  144 ctgtggagacgatatacaa---tatttacttttgattgatagaaaaatactacat 195  Q
    |||||||||||||| ||||   || ||||||||||||||||||||||||||||||    
T  22222102 ctgtggagacgatacacaaaaatacttacttttgattgatagaaaaatactacat 22222048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 22228444 - 22228390
Alignment:
Q  144 ctgtggagacgatatacaa---tatttacttttgattgatagaaaaatactacat 195  Q
    |||||||||||||| ||||   || ||||||||||||||||||||||||||||||    
T  22228444 ctgtggagacgatacacaaaaatacttacttttgattgatagaaaaatactacat 22228390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 13510699 - 13510754
Alignment:
Q  145 tgtggagacgatataca-----atatttacttttgattgatagaaaaatactacat 195  Q
    |||||||||||||||||     ||| ||||||||||||||||||||||||||||||    
T  13510699 tgtggagacgatatacacaaaaatacttacttttgattgatagaaaaatactacat 13510754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 22242667 - 22242614
Alignment:
Q  145 tgtggagacgatatacaa---tatttacttttgattgatagaaaaatactacat 195  Q
    ||||||||||||| ||||   || ||||||||||||||||||||||||||||||    
T  22242667 tgtggagacgatacacaaaaatacttacttttgattgatagaaaaatactacat 22242614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 24040714 - 24040777
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| |||||||  | ||||| ||||||||| | |||||||||||||||||||||||    
T  24040714 agagagaaacataaatcaatgtagttagaagtagattcaagccaagatttgttgagacatcatg 24040777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 34006924 - 34006861
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||  | |||||||||||||||||||||||    
T  34006924 agagagaaacacaaagcaaggtagttaggagtagattaaagccaagatttgttgagacatcatg 34006861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 195
Target Start/End: Complemental strand, 4861356 - 4861322
Alignment:
Q  161 aatatttacttttgattgatagaaaaatactacat 195  Q
    |||| ||||||||||||||||||||||||||||||    
T  4861356 aatacttacttttgattgatagaaaaatactacat 4861322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 22243406 - 22243345
Alignment:
Q  72 agagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||| ||| |||| | ||||| ||||||||| | |||||||||||||||||||||||    
T  22243406 agagaaacacaaaacaaggtagttagaagtagattcaacccaagatttgttgagacatcatg 22243345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 12538155 - 12538219
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    ||||||||||| |||||||| | ||||||| ||||||| | | | ||||||||||||||||||||    
T  12538155 agagagaaacacaaatcaaggtagttaggattagattcaagctatgatttgttgagacatcatga 12538219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 21692165 - 21692229
Alignment:
Q  70 agagagaaacagaaatcaaga-tgttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    |||||||||||  || ||||| |||||| ||| ||||||  ||||||||||||||||||||||||    
T  21692165 agagagaaacatgaagcaagagtgttagaagtggattctttccaagatttgttgagacatcatga 21692229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 14169 - 14250
Alignment:
Q  54 gaaagatggcatttctagagagaaacagaaatcaagatgttaggagtagattctaaccaagatttgttgagacatcatgagttt 137  Q
    |||||| |||||||||||||||| |||  || |||| |||||||||||||||| |  |||||||||||||||||||||||||||    
T  14169 gaaagagggcatttctagagagacaca--aagcaaggtgttaggagtagattcaactcaagatttgttgagacatcatgagttt 14250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 4771 - 4720
Alignment:
Q  144 ctgtggagacgatatacaatatttacttttgattgatagaaaaatactacat 195  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  4771 ctgtggagacaatatacaatacttacttttgattgatagaaaaatactacat 4720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 12373 - 12302
Alignment:
Q  60 tggcatttctagagagaaacagaaatcaagatgttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    |||||||||||||||  |||| ||| |||| |||||||||||||||| | ||||||||| ||||||||||||||    
T  12373 tggcatttctagaga--aacacaaagcaaggtgttaggagtagattcaacccaagatttattgagacatcatga 12302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 16143 - 16072
Alignment:
Q  60 tggcatttctagagagaaacagaaatcaagatgttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    |||||||||||||||  |||| ||| |||| |||||||||||||||| | ||||||||| ||||||||||||||    
T  16143 tggcatttctagaga--aacacaaagcaaggtgttaggagtagattcaacccaagatttattgagacatcatga 16072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 12185 - 12256
Alignment:
Q  60 tggcatttctagagagaaacagaaatcaagatgttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    |||||||||||||||  |||| ||| |||| |||||||||||||||| | ||||||||| ||||||||||||||    
T  12185 tggcatttctagaga--aacacaaagcaaggtgttaggagtagattcaacccaagatttattgagacatcatga 12256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1494 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1494
Description:

Target: scaffold1494; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 1562 - 1625
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  1562 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 1625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 29063 - 29000
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  29063 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 29000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 25814 - 25751
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  25814 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 25751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 116731 - 116668
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  116731 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 116668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 76615 - 76552
Alignment:
Q  70 agagagaaacagaaatcaagat-gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||| ||| |||| | ||||||||||||||| | |||||||||||||||||||||||    
T  76615 agagagaaacacaaagcaaggtagttaggagtagattcaagccaagatttgttgagacatcatg 76552  T

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Target: scaffold0059 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 133
Target Start/End: Complemental strand, 16614 - 16573
Alignment:
Q  92 gttaggagtagattctaaccaagatttgttgagacatcatga 133  Q
    |||| |||||||||||| ||||||||||||||||||||||||    
T  16614 gttaagagtagattctacccaagatttgttgagacatcatga 16573  T

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Target: scaffold0336 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 8763 - 8803
Alignment:
Q  92 gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  8763 gttaggagtagattcaagccaagatttgttgagacatcatg 8803  T

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Target: scaffold0147 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 6753 - 6793
Alignment:
Q  92 gttaggagtagattctaaccaagatttgttgagacatcatg 132  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  6753 gttaggagtagattcaagccaagatttgttgagacatcatg 6793  T

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Target: scaffold0515 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 195
Target Start/End: Original strand, 7513 - 7547
Alignment:
Q  161 aatatttacttttgattgatagaaaaatactacat 195  Q
    |||| ||||||||||||||||||||||||||||||    
T  7513 aatacttacttttgattgatagaaaaatactacat 7547  T

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Target: scaffold0426 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 195
Target Start/End: Original strand, 2541 - 2575
Alignment:
Q  161 aatatttacttttgattgatagaaaaatactacat 195  Q
    |||| ||||||||||||||||||||||||||||||    
T  2541 aatacttacttttgattgatagaaaaatactacat 2575  T

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Target: scaffold0306 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 195
Target Start/End: Original strand, 7523 - 7557
Alignment:
Q  161 aatatttacttttgattgatagaaaaatactacat 195  Q
    |||| ||||||||||||||||||||||||||||||    
T  7523 aatacttacttttgattgatagaaaaatactacat 7557  T

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Target: scaffold0152 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 195
Target Start/End: Original strand, 25134 - 25168
Alignment:
Q  161 aatatttacttttgattgatagaaaaatactacat 195  Q
    |||| ||||||||||||||||||||||||||||||    
T  25134 aatacttacttttgattgatagaaaaatactacat 25168  T

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