View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1519_high_71 (Length: 291)
Name: NF1519_high_71
Description: NF1519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1519_high_71 |
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Alignment Details
Target: chr7 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 13 - 273
Target Start/End: Complemental strand, 35511069 - 35510809
Alignment:
| Q |
13 |
aaaataatcagttctacggcttttctgcacatcatgcaaaacctaccaggcagaatttcagtcaaagcatatgtaacaagcatatcattcatagcaagta |
112 |
Q |
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| T |
35511069 |
aaaataatcagttatacggcttttctgcacatcatgcaaaacctaccaggcagaatttcagtcaaagcatatgtaacaagcatatcattcatagcaagta |
35510970 |
T |
|
| Q |
113 |
ctctagttttcacaatttagaatcagaaggtttgaaattttaataatgcttgtaagtaaaatacaattctcctccatctccatgcccctcgtgttcaaac |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35510969 |
ctctagttttcacaatttagaatcagaaggtttgaaattttaataatgcttgtaagtaaaatacaattctcctccatctccatgcccctcgtgttcaaac |
35510870 |
T |
|
| Q |
213 |
tagttgaaaaatatttagtggctactccataaactgcatatttcttggttaatcactcaat |
273 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35510869 |
tagttgaaaaatatttagtggctactccataaactgcatatttcttggttaatcactcaat |
35510809 |
T |
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