View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1519_low_35 (Length: 392)

Name: NF1519_low_35
Description: NF1519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1519_low_35
NF1519_low_35
[»] chr7 (5 HSPs)
chr7 (1-374)||(2372997-2373370)
chr7 (290-360)||(30022852-30022922)
chr7 (290-360)||(21386807-21386877)
chr7 (290-359)||(33696919-33696988)
chr7 (290-360)||(29644601-29644671)
[»] chr2 (9 HSPs)
chr2 (290-360)||(5607256-5607326)
chr2 (290-360)||(10316224-10316294)
chr2 (290-360)||(10316549-10316619)
chr2 (290-357)||(10315860-10315927)
chr2 (290-360)||(10315496-10315566)
chr2 (290-358)||(10316906-10316974)
chr2 (290-342)||(10317270-10317322)
chr2 (290-345)||(9758751-9758806)
chr2 (313-360)||(14252324-14252371)
[»] chr6 (3 HSPs)
chr6 (290-360)||(3377563-3377633)
chr6 (290-360)||(14608502-14608572)
chr6 (290-360)||(32154882-32154952)
[»] chr5 (5 HSPs)
chr5 (290-360)||(38424564-38424634)
chr5 (290-358)||(21362173-21362241)
chr5 (290-358)||(13545022-13545090)
chr5 (290-357)||(27341631-27341698)
chr5 (292-360)||(25455932-25456000)
[»] scaffold0140 (1 HSPs)
scaffold0140 (293-360)||(4805-4872)
[»] chr1 (5 HSPs)
chr1 (290-345)||(43214948-43215003)
chr1 (290-360)||(44209549-44209619)
chr1 (290-360)||(44209726-44209796)
chr1 (290-360)||(32814683-32814753)
chr1 (290-358)||(22388801-22388869)
[»] chr4 (5 HSPs)
chr4 (290-360)||(21858074-21858144)
chr4 (290-360)||(21913937-21914007)
chr4 (290-360)||(45764935-45765005)
chr4 (313-360)||(12594986-12595033)
chr4 (292-358)||(35194444-35194510)
[»] chr3 (1 HSPs)
chr3 (290-360)||(9665912-9665982)


Alignment Details
Target: chr7 (Bit Score: 318; Significance: 1e-179; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 1 - 374
Target Start/End: Complemental strand, 2373370 - 2372997
Alignment:
Q  1 tgaccctgaatgataaaactcaaaatttggtataaaccaatgctattagtacatctctgaaatcacaatgagtttgataaaatcacggtaacacattatg 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2373370 tgaccctgaatgataaaactcaaaatttggtataaaccagtgctattagtacatgtctgaaatcacaatgagtttgataaaatcacggtaacacattatg 2373271  T
Q  101 attctgacaaactcacagataatcgaaacatgtagtaaacatcacctggaagttgtaactagtagcagcacacggggcagcgaattagtccattttcatt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2373270 attctgacaaactcacagataatcgaaacatgtagtaaacatcacctggaagatgtaactagtagcagcacacggggcagcgaattagtccattttcatt 2373171  T
Q  201 acaatccggacaacgttggaatccaaactcgccttcttcatgaccatgatcgtcatatgattcttcgtcctcgtcaccatcttcattaaagattttacaa 300  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||  ||| ||||| || |||||||||||||   |||||||||||    
T  2373170 acaatccggacaacgttggaatccaaacttgccttcttcacgaccatgatcatcatattcttcctcgtcgtcatcaccatcttcatagtagattttacaa 2373071  T
Q  301 cttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatccaccacaactatcctcaat 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2373070 cttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatccaccacaactatcctcaat 2372997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 290 - 360
Target Start/End: Complemental strand, 30022922 - 30022852
Alignment:
Q  290 agattttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatccacca 360  Q
    ||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||  |||||||||||||    
T  30022922 agattttacaacttccataacatgtttcacaaggaacaaactttatatcaccacaagcctcacatccacca 30022852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 290 - 360
Target Start/End: Original strand, 21386807 - 21386877
Alignment:
Q  290 agattttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatccacca 360  Q
    ||||||||||||||||| |||| |||||||||| ||||||| | ||||||||||||  |||||||||||||    
T  21386807 agattttacaacttccataacatgtttcacaagaaacaaacttgatatcaccacaagcctcacatccacca 21386877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 290 - 359
Target Start/End: Original strand, 33696919 - 33696988
Alignment:
Q  290 agattttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatccacc 359  Q
    ||||||||||||||||| |||| |||| ||||||||||||| ||||||||||||||  ||||| ||||||    
T  33696919 agattttacaacttccataacatgtttaacaaggaacaaactttatatcaccacaagcctcacgtccacc 33696988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 360
Target Start/End: Complemental strand, 29644671 - 29644601
Alignment:
Q  290 agattttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatccacca 360  Q
    ||||||||||||||||| |||| |||||||||||||||||  |||| |||| ||||  |||| ||||||||    
T  29644671 agattttacaacttccataacatgtttcacaaggaacaaaatttatgtcacgacaagcctcaaatccacca 29644601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 4e-20; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 290 - 360
Target Start/End: Complemental strand, 5607326 - 5607256
Alignment:
Q  290 agattttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatccacca 360  Q
    |||||||||||||||||||||| |||||||||||||||| | |||||||||| ||| ||||||||||||||    
T  5607326 agattttacaacttccaaaacatgtttcacaaggaacaagctttatatcaccgcaagtctcacatccacca 5607256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 290 - 360
Target Start/End: Original strand, 10316224 - 10316294
Alignment:
Q  290 agattttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatccacca 360  Q
    ||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||  |||||||||||||    
T  10316224 agattttacaacttccataacatgtttcacaaggaacaaactttatatcaccacaagcctcacatccacca 10316294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 290 - 360
Target Start/End: Original strand, 10316549 - 10316619
Alignment:
Q  290 agattttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatccacca 360  Q
    ||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||  |||||||||||||    
T  10316549 agattttacaacttccataacatgtttcacaaggaacaaactttatatcaccacaagcctcacatccacca 10316619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 290 - 357
Target Start/End: Original strand, 10315860 - 10315927
Alignment:
Q  290 agattttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatcca 357  Q
    ||||||||||||||||| |||| |||||||||||||||||| ||||||||||| || |||||||||||    
T  10315860 agattttacaacttccataacatgtttcacaaggaacaaactttatatcaccataagtctcacatcca 10315927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 360
Target Start/End: Original strand, 10315496 - 10315566
Alignment:
Q  290 agattttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatccacca 360  Q
    ||||||||||||||||| |||| |||||||||||||||||| | ||||||||||||  |||||||||||||    
T  10315496 agattttacaacttccataacatgtttcacaaggaacaaacttaatatcaccacaagcctcacatccacca 10315566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 290 - 358
Target Start/End: Original strand, 10316906 - 10316974
Alignment:
Q  290 agattttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatccac 358  Q
    ||||||||||||||||| |||| ||||| |||||||||||| ||||||||||||||  |||||||||||    
T  10316906 agattttacaacttccataacatgtttcgcaaggaacaaactttatatcaccacaagcctcacatccac 10316974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 10317270 - 10317322
Alignment:
Q  290 agattttacaacttccaaaacaagtttcacaaggaacaaaccttatatcacca 342  Q
    ||||||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  10317270 agattttacaacttccataacatgtttcacaaggaacaaactttatatcacca 10317322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 345
Target Start/End: Complemental strand, 9758806 - 9758751
Alignment:
Q  290 agattttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaa 345  Q
    ||||||||||||||||| |||| |||||| ||||||||||| |||||||| |||||    
T  9758806 agattttacaacttccataacatgtttcataaggaacaaactttatatcagcacaa 9758751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 14252371 - 14252324
Alignment:
Q  313 gtttcacaaggaacaaaccttatatcaccacaattctcacatccacca 360  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||||    
T  14252371 gtttcacaaggaacaaactttatatcaccacaagcctcacatccacca 14252324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 360
Target Start/End: Complemental strand, 3377633 - 3377563
Alignment:
Q  290 agattttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatccacca 360  Q
    ||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||  |||||||||||||    
T  3377633 agattttacaacttccataacatttttcacaaggaacaaactttatatcaccacaagcctcacatccacca 3377563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 360
Target Start/End: Complemental strand, 14608572 - 14608502
Alignment:
Q  290 agattttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatccacca 360  Q
    ||||||||||||||||| |||| |||||||||||||||||  ||||||||||||||  |||||||||||||    
T  14608572 agattttacaacttccataacatgtttcacaaggaacaaattttatatcaccacaagcctcacatccacca 14608502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 290 - 360
Target Start/End: Original strand, 32154882 - 32154952
Alignment:
Q  290 agattttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatccacca 360  Q
    ||||||||||||||||| |||| |||||| ||||||| ||| ||||||||||||||  |||||||||||||    
T  32154882 agattttacaacttccataacatgtttcataaggaacgaactttatatcaccacaagcctcacatccacca 32154952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 360
Target Start/End: Complemental strand, 38424634 - 38424564
Alignment:
Q  290 agattttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatccacca 360  Q
    ||||||||||| ||||| |||| |||||||||||||||||| ||||||||||||||  |||||||||||||    
T  38424634 agattttacaatttccataacatgtttcacaaggaacaaactttatatcaccacaagcctcacatccacca 38424564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 290 - 358
Target Start/End: Complemental strand, 21362241 - 21362173
Alignment:
Q  290 agattttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatccac 358  Q
    ||||||||||||||||| |||| ||||||||| |||||||| ||||||||||||||  |||||||||||    
T  21362241 agattttacaacttccataacacgtttcacaacgaacaaactttatatcaccacaagcctcacatccac 21362173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 290 - 358
Target Start/End: Complemental strand, 13545090 - 13545022
Alignment:
Q  290 agattttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatccac 358  Q
    ||||||||||||||||| |||| | |||| ||||||||||| |||||||||| |||  |||||||||||    
T  13545090 agattttacaacttccataacatggttcagaaggaacaaactttatatcaccgcaagcctcacatccac 13545022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 357
Target Start/End: Complemental strand, 27341698 - 27341631
Alignment:
Q  290 agattttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatcca 357  Q
    ||||||||||||||||| |||| |||||| | ||||||||| |||||| |||||||  ||||||||||    
T  27341698 agattttacaacttccataacatgtttcatagggaacaaactttatattaccacaagcctcacatcca 27341631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 360
Target Start/End: Original strand, 25455932 - 25456000
Alignment:
Q  292 attttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatccacca 360  Q
    ||||||||||||||| |  | |||| ||||||||||||| |||||||||||||   |||||||||||||    
T  25455932 attttacaacttccatagaatgttttacaaggaacaaactttatatcaccacatccctcacatccacca 25456000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 293 - 360
Target Start/End: Original strand, 4805 - 4872
Alignment:
Q  293 ttttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatccacca 360  Q
    |||||||||||||| |||| |||| ||||||||||||| ||||||||||||||  |||||||||||||    
T  4805 ttttacaacttccataacatgttttacaaggaacaaactttatatcaccacaagcctcacatccacca 4872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 6e-16; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 290 - 345
Target Start/End: Complemental strand, 43215003 - 43214948
Alignment:
Q  290 agattttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaa 345  Q
    ||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||    
T  43215003 agattttacaacttccacaacatgtttcacaaggaacaaactttatatcaccacaa 43214948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 290 - 360
Target Start/End: Complemental strand, 44209619 - 44209549
Alignment:
Q  290 agattttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatccacca 360  Q
    ||||||||||||||||| |||| |||||| ||||||||||| ||||||||||||||  ||| |||||||||    
T  44209619 agattttacaacttccataacatgtttcataaggaacaaactttatatcaccacaagcctcgcatccacca 44209549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 290 - 360
Target Start/End: Complemental strand, 44209796 - 44209726
Alignment:
Q  290 agattttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatccacca 360  Q
    ||||||||||||||||| |||| |||||| ||||||||||| ||||||||||||||  ||| |||||||||    
T  44209796 agattttacaacttccataacatgtttcataaggaacaaactttatatcaccacaagcctcgcatccacca 44209726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 290 - 360
Target Start/End: Complemental strand, 32814753 - 32814683
Alignment:
Q  290 agattttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatccacca 360  Q
    |||||||||||||| || |||| |||| ||||||||||||| ||||||||||||||  |||||||| ||||    
T  32814753 agattttacaacttacataacatgtttaacaaggaacaaactttatatcaccacaagcctcacatcaacca 32814683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 290 - 358
Target Start/End: Complemental strand, 22388869 - 22388801
Alignment:
Q  290 agattttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatccac 358  Q
    |||||||||||||| || |||| |||||| ||||||||||| ||||||||||||||  | |||||||||    
T  22388869 agattttacaactttcataacatgtttcagaaggaacaaactttatatcaccacaaaccccacatccac 22388801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 290 - 360
Target Start/End: Complemental strand, 21858144 - 21858074
Alignment:
Q  290 agattttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatccacca 360  Q
    |||||||||||||| || |||| |||||||||||||||||  ||||||||||||||  |||||||||||||    
T  21858144 agattttacaacttacataacatgtttcacaaggaacaaattttatatcaccacaaccctcacatccacca 21858074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 290 - 360
Target Start/End: Complemental strand, 21914007 - 21913937
Alignment:
Q  290 agattttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatccacca 360  Q
    |||||||||||||| || |||| |||||||||||||||||  ||||||||||||||  |||||||||||||    
T  21914007 agattttacaacttacataacatgtttcacaaggaacaaattttatatcaccacaaccctcacatccacca 21913937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 290 - 360
Target Start/End: Original strand, 45764935 - 45765005
Alignment:
Q  290 agattttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatccacca 360  Q
    ||||||||||||||||| |||| |||||||||||||||||  |||||||||||||   |||||||||||||    
T  45764935 agattttacaacttccataacatgtttcacaaggaacaaattttatatcaccacaggcctcacatccacca 45765005  T

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Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 12594986 - 12595033
Alignment:
Q  313 gtttcacaaggaacaaaccttatatcaccacaattctcacatccacca 360  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||||    
T  12594986 gtttcacaaggaacaaactttatatcaccacaagcctcacatccacca 12595033  T

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Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 358
Target Start/End: Original strand, 35194444 - 35194510
Alignment:
Q  292 attttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatccac 358  Q
    ||||||||| || || |||| |||||||||| ||||||  ||||||||||||||  |||||||||||    
T  35194444 attttacaattttcataacatgtttcacaagcaacaaattttatatcaccacaagcctcacatccac 35194510  T

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Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 290 - 360
Target Start/End: Original strand, 9665912 - 9665982
Alignment:
Q  290 agattttacaacttccaaaacaagtttcacaaggaacaaaccttatatcaccacaattctcacatccacca 360  Q
    |||||||||||||||||  ||| |||||||||||||||||| ||||||||||||||   ||||||||||||    
T  9665912 agattttacaacttccatgacatgtttcacaaggaacaaactttatatcaccacaagcttcacatccacca 9665982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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