View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1519_low_52 (Length: 348)

Name: NF1519_low_52
Description: NF1519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1519_low_52
NF1519_low_52
[»] chr2 (89 HSPs)
chr2 (99-333)||(7640138-7640371)
chr2 (99-333)||(25771544-25771777)
chr2 (99-333)||(43566973-43567205)
chr2 (109-333)||(43929082-43929305)
chr2 (99-333)||(36508029-36508261)
chr2 (99-333)||(25516592-25516824)
chr2 (99-333)||(27023921-27024154)
chr2 (99-329)||(38822172-38822400)
chr2 (99-333)||(44167493-44167725)
chr2 (99-333)||(5930522-5930755)
chr2 (99-333)||(27191115-27191351)
chr2 (99-333)||(27840929-27841165)
chr2 (111-333)||(41176970-41177190)
chr2 (99-333)||(3603084-3603317)
chr2 (99-333)||(3390531-3390755)
chr2 (99-333)||(6089990-6090221)
chr2 (132-333)||(3465061-3465261)
chr2 (104-333)||(10589199-10589427)
chr2 (103-241)||(44951522-44951659)
chr2 (104-333)||(16720630-16720858)
chr2 (99-333)||(7443348-7443581)
chr2 (99-229)||(16879851-16879980)
chr2 (99-229)||(16991984-16992113)
chr2 (99-333)||(25622826-25623060)
chr2 (99-333)||(19580784-19581017)
chr2 (99-332)||(26491401-26491632)
chr2 (109-333)||(4878518-4878741)
chr2 (133-333)||(15673750-15673949)
chr2 (110-333)||(37883763-37883985)
chr2 (99-333)||(35353742-35353972)
chr2 (99-333)||(2251129-2251360)
chr2 (99-333)||(5071152-5071385)
chr2 (109-335)||(13268681-13268906)
chr2 (116-333)||(28228338-28228554)
chr2 (197-333)||(18141263-18141406)
chr2 (99-332)||(29734289-29734523)
chr2 (99-241)||(24500586-24500727)
chr2 (121-273)||(11550437-11550589)
chr2 (100-333)||(25237113-25237340)
chr2 (153-333)||(20036534-20036714)
chr2 (177-335)||(31125159-31125317)
chr2 (99-333)||(9715326-9715559)
chr2 (99-273)||(29812457-29812629)
chr2 (99-333)||(3397761-3397994)
chr2 (109-333)||(17068698-17068920)
chr2 (102-244)||(19953672-19953812)
chr2 (110-333)||(17118596-17118817)
chr2 (218-333)||(15920091-15920206)
chr2 (210-332)||(34480173-34480296)
chr2 (99-162)||(43929308-43929371)
chr2 (196-333)||(17056251-17056388)
chr2 (109-329)||(17074699-17074917)
chr2 (193-333)||(12366060-12366200)
chr2 (111-330)||(40125500-40125716)
chr2 (99-171)||(41842047-41842118)
chr2 (161-305)||(42105576-42105719)
chr2 (232-303)||(35333742-35333813)
chr2 (109-333)||(17095268-17095490)
chr2 (104-161)||(43929281-43929338)
chr2 (256-331)||(38384242-38384317)
chr2 (256-333)||(6431191-6431268)
chr2 (104-161)||(16720829-16720886)
chr2 (232-333)||(25068087-25068188)
chr2 (223-303)||(8064599-8064679)
chr2 (275-333)||(9207138-9207196)
chr2 (291-333)||(11931162-11931204)
chr2 (232-313)||(10286810-10286891)
chr2 (108-153)||(10589175-10589220)
chr2 (100-161)||(16720857-16720918)
chr2 (182-242)||(802961-803021)
chr2 (1-37)||(29812692-29812728)
chr2 (190-234)||(32347563-32347607)
chr2 (232-335)||(9978450-9978553)
chr2 (232-303)||(17267939-17268010)
chr2 (232-303)||(34416576-34416647)
chr2 (232-303)||(43696105-43696176)
chr2 (188-242)||(31262826-31262880)
chr2 (99-149)||(31269060-31269110)
chr2 (213-279)||(40039151-40039217)
chr2 (256-313)||(4732331-4732388)
chr2 (1-38)||(7640432-7640469)
chr2 (291-332)||(13740429-13740470)
chr2 (196-273)||(17084294-17084371)
chr2 (99-148)||(31262920-31262969)
chr2 (132-281)||(38105355-38105503)
chr2 (2-38)||(19581079-19581115)
chr2 (258-302)||(20570230-20570274)
chr2 (231-303)||(32015489-32015561)
chr2 (190-234)||(32341774-32341818)
[»] chr8 (68 HSPs)
chr8 (99-332)||(44295415-44295647)
chr8 (99-333)||(8054590-8054822)
chr8 (99-333)||(37129457-37129688)
chr8 (99-333)||(41996644-41996875)
chr8 (99-333)||(5457170-5457403)
chr8 (99-333)||(9270120-9270353)
chr8 (99-331)||(32412889-32413120)
chr8 (99-333)||(32104619-32104853)
chr8 (99-333)||(9992766-9992998)
chr8 (99-333)||(16996671-16996903)
chr8 (99-305)||(14115638-14115843)
chr8 (99-333)||(36545563-36545796)
chr8 (99-333)||(31874183-31874412)
chr8 (141-332)||(5328095-5328280)
chr8 (99-333)||(32256503-32256736)
chr8 (99-333)||(3925472-3925705)
chr8 (109-333)||(31712858-31713081)
chr8 (99-333)||(16937121-16937354)
chr8 (100-333)||(10042872-10043103)
chr8 (99-333)||(12248493-12248729)
chr8 (99-243)||(37659065-37659208)
chr8 (99-333)||(32061893-32062126)
chr8 (99-333)||(12243998-12244231)
chr8 (100-241)||(26937625-26937765)
chr8 (153-328)||(13977560-13977735)
chr8 (128-333)||(23766867-23767071)
chr8 (99-332)||(2629011-2629241)
chr8 (103-333)||(27534194-27534423)
chr8 (154-333)||(37719993-37720172)
chr8 (100-273)||(15665639-15665811)
chr8 (99-241)||(5989729-5989870)
chr8 (99-242)||(5917622-5917757)
chr8 (99-303)||(7280941-7281142)
chr8 (116-288)||(11298587-11298758)
chr8 (222-333)||(14530698-14530809)
chr8 (99-252)||(17019217-17019369)
chr8 (99-252)||(17549654-17549806)
chr8 (191-333)||(18190633-18190770)
chr8 (99-335)||(7269246-7269479)
chr8 (99-333)||(1215123-1215354)
chr8 (99-227)||(14327578-14327705)
chr8 (210-333)||(18196928-18197051)
chr8 (99-280)||(26582727-26582903)
chr8 (232-333)||(10338613-10338714)
chr8 (116-242)||(13864475-13864600)
chr8 (100-333)||(16938054-16938285)
chr8 (99-208)||(3681022-3681130)
chr8 (228-333)||(16809090-16809195)
chr8 (166-333)||(31147609-31147780)
chr8 (256-333)||(10148206-10148283)
chr8 (187-263)||(18994075-18994151)
chr8 (200-268)||(32920843-32920911)
chr8 (256-303)||(2025045-2025092)
chr8 (218-313)||(7256613-7256706)
chr8 (223-282)||(10334398-10334457)
chr8 (232-303)||(30026703-30026774)
chr8 (191-305)||(14919200-14919313)
chr8 (191-303)||(12356985-12357097)
chr8 (190-238)||(45311088-45311136)
chr8 (232-303)||(19720246-19720317)
chr8 (218-333)||(32778754-32778869)
chr8 (127-242)||(36555902-36556015)
chr8 (232-274)||(5526039-5526081)
chr8 (291-333)||(5989903-5989945)
chr8 (99-153)||(18890779-18890832)
chr8 (1-38)||(9992666-9992703)
chr8 (1-38)||(31874085-31874122)
chr8 (1-34)||(37658967-37659000)
[»] chr7 (71 HSPs)
chr7 (99-333)||(40775366-40775599)
chr7 (99-333)||(47749833-47750066)
chr7 (99-333)||(26017440-26017673)
chr7 (99-333)||(30992605-30992838)
chr7 (99-333)||(49167025-49167257)
chr7 (99-333)||(7985991-7986224)
chr7 (99-333)||(8611406-8611638)
chr7 (99-333)||(40476807-40477039)
chr7 (99-319)||(134941-135160)
chr7 (99-333)||(11001943-11002175)
chr7 (99-333)||(42490802-42491035)
chr7 (99-332)||(43806933-43807165)
chr7 (99-333)||(24475441-24475684)
chr7 (115-333)||(24470509-24470736)
chr7 (99-333)||(8319414-8319647)
chr7 (153-333)||(19895466-19895646)
chr7 (99-332)||(772542-772774)
chr7 (132-333)||(37399730-37399930)
chr7 (99-333)||(23732175-23732408)
chr7 (99-333)||(28015456-28015689)
chr7 (99-270)||(25855065-25855235)
chr7 (99-333)||(29804461-29804690)
chr7 (99-333)||(47156491-47156717)
chr7 (99-273)||(9933946-9934115)
chr7 (103-331)||(44681563-44681790)
chr7 (132-335)||(39090220-39090422)
chr7 (99-329)||(5024842-5025071)
chr7 (99-333)||(46918499-46918731)
chr7 (99-333)||(43483699-43483920)
chr7 (182-333)||(21552237-21552388)
chr7 (99-333)||(33530257-33530483)
chr7 (99-332)||(14707682-14707913)
chr7 (196-333)||(45949461-45949598)
chr7 (99-217)||(13008571-13008688)
chr7 (192-333)||(2532132-2532273)
chr7 (132-333)||(41748309-41748509)
chr7 (99-242)||(10250356-10250496)
chr7 (99-263)||(23177435-23177598)
chr7 (191-333)||(21329080-21329222)
chr7 (121-229)||(22751559-22751666)
chr7 (153-333)||(37890272-37890451)
chr7 (99-330)||(38649143-38649372)
chr7 (116-235)||(24045160-24045279)
chr7 (223-333)||(22379491-22379601)
chr7 (218-330)||(39707501-39707613)
chr7 (218-333)||(14733847-14733962)
chr7 (99-333)||(34594304-34594537)
chr7 (110-333)||(34893221-34893439)
chr7 (232-333)||(44482656-44482757)
chr7 (231-333)||(5684600-5684702)
chr7 (231-333)||(5709650-5709752)
chr7 (99-164)||(14734000-14734064)
chr7 (132-333)||(36350300-36350499)
chr7 (218-322)||(29352443-29352547)
chr7 (207-322)||(16273588-16273703)
chr7 (218-333)||(4621154-4621271)
chr7 (99-333)||(32312666-32312899)
chr7 (120-266)||(35135033-35135177)
chr7 (204-330)||(35362892-35363018)
chr7 (232-333)||(36719335-36719436)
chr7 (232-332)||(17473536-17473636)
chr7 (232-332)||(17579578-17579678)
chr7 (231-332)||(40657840-40657945)
chr7 (99-211)||(16263486-16263589)
chr7 (290-333)||(18753984-18754027)
chr7 (234-333)||(37375829-37375928)
chr7 (232-303)||(40761825-40761896)
chr7 (259-333)||(3266650-3266724)
chr7 (291-333)||(22751692-22751734)
chr7 (256-333)||(45482325-45482402)
chr7 (225-313)||(21954627-21954715)
[»] chr4 (82 HSPs)
chr4 (99-333)||(46716676-46716909)
chr4 (99-333)||(4634382-4634615)
chr4 (99-333)||(14542294-14542527)
chr4 (99-333)||(23067630-23067863)
chr4 (103-330)||(42972141-42972367)
chr4 (99-333)||(9474321-9474554)
chr4 (99-333)||(9661952-9662185)
chr4 (99-335)||(32189079-32189313)
chr4 (104-333)||(30469905-30470132)
chr4 (99-333)||(34115438-34115666)
chr4 (99-333)||(20961548-20961780)
chr4 (99-333)||(37869199-37869432)
chr4 (99-333)||(31601138-31601373)
chr4 (99-329)||(41486674-41486903)
chr4 (99-333)||(50002958-50003191)
chr4 (132-333)||(54420522-54420723)
chr4 (99-332)||(46728703-46728935)
chr4 (132-332)||(53903713-53903910)
chr4 (140-319)||(52555536-52555714)
chr4 (99-333)||(43156875-43157109)
chr4 (132-333)||(9549571-9549771)
chr4 (116-333)||(14346547-14346763)
chr4 (128-333)||(29474110-29474314)
chr4 (99-329)||(15729767-15729996)
chr4 (99-333)||(38434698-38434930)
chr4 (99-333)||(44375057-44375279)
chr4 (121-333)||(26576285-26576495)
chr4 (99-333)||(51646192-51646429)
chr4 (99-286)||(12519755-12519941)
chr4 (102-333)||(29589143-29589373)
chr4 (109-332)||(29576904-29577127)
chr4 (99-333)||(46775640-46775871)
chr4 (99-332)||(1125040-1125272)
chr4 (103-333)||(16991975-16992204)
chr4 (104-271)||(30416437-30416603)
chr4 (99-333)||(4959356-4959588)
chr4 (116-273)||(28990414-28990570)
chr4 (110-221)||(40859784-40859894)
chr4 (175-329)||(23926215-23926369)
chr4 (191-333)||(33020709-33020851)
chr4 (117-262)||(3169543-3169687)
chr4 (109-270)||(7242614-7242774)
chr4 (99-262)||(6789729-6789891)
chr4 (99-333)||(6408542-6408777)
chr4 (200-332)||(11817255-11817387)
chr4 (99-333)||(1657348-1657581)
chr4 (99-272)||(2945236-2945408)
chr4 (180-333)||(31311647-31311802)
chr4 (123-262)||(1645408-1645546)
chr4 (187-274)||(44021422-44021509)
chr4 (109-242)||(46386647-46386779)
chr4 (99-311)||(38169964-38170174)
chr4 (117-303)||(35658343-35658527)
chr4 (192-274)||(5388706-5388788)
chr4 (99-272)||(4622552-4622724)
chr4 (117-303)||(29257342-29257527)
chr4 (231-333)||(6082213-6082315)
chr4 (99-153)||(30416582-30416636)
chr4 (232-333)||(7083595-7083696)
chr4 (232-333)||(51152361-51152462)
chr4 (99-151)||(40859745-40859797)
chr4 (290-333)||(23002714-23002757)
chr4 (195-282)||(38545918-38546005)
chr4 (175-243)||(9781679-9781748)
chr4 (232-303)||(31522183-31522254)
chr4 (232-303)||(32616672-32616743)
chr4 (224-335)||(50981494-50981605)
chr4 (256-333)||(477795-477872)
chr4 (256-333)||(626333-626410)
chr4 (191-236)||(17219943-17219988)
chr4 (232-333)||(22757331-22757432)
chr4 (230-313)||(5814575-5814658)
chr4 (232-303)||(30202275-30202346)
chr4 (109-264)||(47466014-47466167)
chr4 (232-274)||(50801454-50801496)
chr4 (232-333)||(7060560-7060661)
chr4 (191-236)||(10665748-10665793)
chr4 (191-236)||(10879893-10879938)
chr4 (232-281)||(20887592-20887641)
chr4 (1-38)||(28588562-28588599)
chr4 (100-157)||(38546015-38546072)
chr4 (295-335)||(20887529-20887569)
[»] chr3 (67 HSPs)
chr3 (99-333)||(43029782-43030015)
chr3 (99-333)||(1165178-1165411)
chr3 (99-333)||(28995091-28995323)
chr3 (99-332)||(54240185-54240417)
chr3 (99-333)||(3088446-3088678)
chr3 (99-333)||(22286533-22286765)
chr3 (120-333)||(50519904-50520115)
chr3 (100-332)||(20200841-20201072)
chr3 (99-333)||(29182392-29182623)
chr3 (100-332)||(20203023-20203254)
chr3 (99-333)||(45664320-45664553)
chr3 (99-335)||(43839297-43839533)
chr3 (99-333)||(33977707-33977939)
chr3 (99-323)||(21803629-21803853)
chr3 (99-315)||(41882210-41882424)
chr3 (99-332)||(20251756-20251988)
chr3 (102-333)||(7656302-7656527)
chr3 (167-333)||(33076451-33076617)
chr3 (99-333)||(913098-913331)
chr3 (135-332)||(11846684-11846879)
chr3 (99-333)||(47914375-47914608)
chr3 (99-333)||(4019694-4019930)
chr3 (100-333)||(40797133-40797365)
chr3 (99-335)||(35501539-35501774)
chr3 (111-333)||(32237778-32237999)
chr3 (99-333)||(22844151-22844384)
chr3 (99-323)||(53426897-53427120)
chr3 (99-333)||(21585998-21586231)
chr3 (99-333)||(39340298-39340531)
chr3 (175-333)||(37051768-37051926)
chr3 (99-332)||(32089714-32089945)
chr3 (99-206)||(14741234-14741340)
chr3 (153-333)||(50460342-50460522)
chr3 (99-333)||(40461777-40462010)
chr3 (111-331)||(29776474-29776693)
chr3 (99-333)||(34767084-34767318)
chr3 (109-242)||(42106249-42106379)
chr3 (99-242)||(25939352-25939494)
chr3 (231-333)||(10977473-10977575)
chr3 (99-242)||(22893588-22893730)
chr3 (99-239)||(36540550-36540688)
chr3 (155-310)||(26412442-26412599)
chr3 (131-333)||(2598210-2598410)
chr3 (191-281)||(25373916-25374006)
chr3 (191-271)||(27831289-27831369)
chr3 (175-241)||(48060963-48061029)
chr3 (232-332)||(31462538-31462638)
chr3 (157-273)||(33793922-33794038)
chr3 (258-332)||(14741165-14741239)
chr3 (100-153)||(42106212-42106265)
chr3 (232-333)||(49627886-49627987)
chr3 (256-333)||(55455132-55455209)
chr3 (99-211)||(1220151-1220262)
chr3 (182-333)||(1806241-1806395)
chr3 (152-244)||(43242959-43243051)
chr3 (266-333)||(2148020-2148087)
chr3 (99-172)||(25374013-25374085)
chr3 (232-280)||(19861123-19861171)
chr3 (233-333)||(48652231-48652331)
chr3 (232-282)||(40013114-40013164)
chr3 (1-38)||(20201134-20201171)
chr3 (1-38)||(20203316-20203353)
chr3 (182-243)||(35670594-35670655)
chr3 (232-333)||(41868114-41868215)
chr3 (1-38)||(50519791-50519828)
chr3 (256-333)||(55446318-55446395)
chr3 (233-333)||(33637641-33637741)
[»] chr1 (68 HSPs)
chr1 (99-333)||(22344694-22344927)
chr1 (101-333)||(21326574-21326805)
chr1 (99-333)||(44562531-44562764)
chr1 (99-317)||(5832333-5832550)
chr1 (99-333)||(15276228-15276465)
chr1 (99-333)||(38646683-38646916)
chr1 (114-333)||(12967515-12967732)
chr1 (99-330)||(23257187-23257417)
chr1 (99-333)||(36621451-36621683)
chr1 (99-320)||(4564616-4564835)
chr1 (99-325)||(630574-630799)
chr1 (99-333)||(38644579-38644812)
chr1 (132-333)||(6212696-6212896)
chr1 (132-332)||(45659146-45659345)
chr1 (132-333)||(14717055-14717252)
chr1 (99-333)||(15698299-15698530)
chr1 (99-305)||(28213147-28213351)
chr1 (99-239)||(23320539-23320678)
chr1 (141-333)||(44513784-44513975)
chr1 (99-332)||(11121075-11121307)
chr1 (100-333)||(13969422-13969657)
chr1 (99-333)||(33703292-33703525)
chr1 (99-333)||(49651943-49652167)
chr1 (99-333)||(52839629-52839862)
chr1 (99-333)||(8893392-8893624)
chr1 (99-333)||(27469490-27469723)
chr1 (110-333)||(33177380-33177601)
chr1 (100-333)||(26199680-26199912)
chr1 (132-332)||(40992440-40992629)
chr1 (99-333)||(2350721-2350954)
chr1 (116-263)||(10264825-10264971)
chr1 (99-333)||(12147830-12148063)
chr1 (99-331)||(47392237-47392466)
chr1 (118-323)||(48654833-48655037)
chr1 (110-242)||(22031964-22032095)
chr1 (99-242)||(32539062-32539205)
chr1 (214-333)||(1768140-1768259)
chr1 (182-333)||(34659423-34659574)
chr1 (132-273)||(900226-900365)
chr1 (175-333)||(13691545-13691703)
chr1 (99-333)||(10877445-10877679)
chr1 (132-333)||(46589279-46589480)
chr1 (99-271)||(37684934-37685105)
chr1 (99-271)||(37700412-37700583)
chr1 (214-333)||(26771319-26771438)
chr1 (111-333)||(29067160-29067379)
chr1 (99-333)||(34566787-34567013)
chr1 (99-171)||(1768065-1768135)
chr1 (230-333)||(12871850-12871953)
chr1 (218-333)||(47551312-47551427)
chr1 (99-163)||(52752122-52752185)
chr1 (182-333)||(8224355-8224506)
chr1 (218-333)||(32878925-32879040)
chr1 (218-332)||(9298206-9298320)
chr1 (99-153)||(40488358-40488412)
chr1 (219-333)||(40862608-40862722)
chr1 (232-333)||(18343849-18343950)
chr1 (232-303)||(45750715-45750786)
chr1 (218-303)||(10304795-10304880)
chr1 (220-284)||(30678474-30678538)
chr1 (194-242)||(37662403-37662451)
chr1 (218-333)||(13152657-13152772)
chr1 (213-280)||(29938449-29938516)
chr1 (99-153)||(48750142-48750195)
chr1 (266-335)||(22031882-22031951)
chr1 (232-277)||(29205522-29205567)
chr1 (1-38)||(44562825-44562862)
chr1 (218-274)||(2486129-2486185)
[»] scaffold0722 (1 HSPs)
scaffold0722 (99-333)||(5308-5541)
[»] scaffold0316 (1 HSPs)
scaffold0316 (99-333)||(11985-12218)
[»] chr6 (39 HSPs)
chr6 (111-333)||(7049356-7049577)
chr6 (99-333)||(23843206-23843439)
chr6 (99-333)||(13233890-13234123)
chr6 (99-333)||(12576263-12576495)
chr6 (99-333)||(19759887-19760120)
chr6 (111-333)||(20845119-20845340)
chr6 (99-333)||(16913427-16913657)
chr6 (99-333)||(11426041-11426277)
chr6 (99-299)||(548682-548881)
chr6 (99-323)||(8632988-8633206)
chr6 (99-333)||(31748056-31748289)
chr6 (99-333)||(32457745-32457973)
chr6 (99-333)||(10744682-10744914)
chr6 (103-333)||(34020708-34020935)
chr6 (139-333)||(20496332-20496525)
chr6 (99-333)||(32804394-32804627)
chr6 (99-242)||(4663693-4663835)
chr6 (121-298)||(1944217-1944393)
chr6 (127-333)||(15127912-15128116)
chr6 (116-242)||(5544823-5544948)
chr6 (218-333)||(12654092-12654207)
chr6 (207-333)||(5417006-5417132)
chr6 (132-242)||(31804352-31804461)
chr6 (99-172)||(5417141-5417213)
chr6 (130-242)||(8644375-8644486)
chr6 (99-154)||(15128113-15128168)
chr6 (99-329)||(33541317-33541544)
chr6 (199-305)||(892482-892588)
chr6 (118-232)||(904386-904499)
chr6 (99-242)||(22530379-22530520)
chr6 (99-208)||(33194704-33194812)
chr6 (233-333)||(12481153-12481253)
chr6 (189-272)||(17874530-17874613)
chr6 (232-303)||(23637933-23638004)
chr6 (291-333)||(8644518-8644560)
chr6 (123-333)||(12651983-12652188)
chr6 (230-303)||(13871439-13871512)
chr6 (1-38)||(19759789-19759826)
chr6 (100-164)||(32574536-32574599)
[»] chr5 (59 HSPs)
chr5 (99-333)||(29310136-29310369)
chr5 (99-333)||(6886960-6887193)
chr5 (99-333)||(31645928-31646161)
chr5 (99-333)||(4070651-4070882)
chr5 (99-333)||(28618702-28618934)
chr5 (99-305)||(4726738-4726943)
chr5 (99-333)||(10923916-10924148)
chr5 (99-333)||(41554586-41554819)
chr5 (99-333)||(2415499-2415734)
chr5 (99-318)||(41063193-41063411)
chr5 (99-333)||(5378401-5378634)
chr5 (99-333)||(9034724-9034957)
chr5 (132-333)||(35906401-35906601)
chr5 (99-333)||(20270813-20271046)
chr5 (99-333)||(40774859-40775093)
chr5 (99-333)||(33486351-33486584)
chr5 (99-333)||(8811934-8812166)
chr5 (99-331)||(6647697-6647928)
chr5 (99-333)||(18472508-18472740)
chr5 (109-308)||(19645849-19646046)
chr5 (99-242)||(22397421-22397563)
chr5 (99-332)||(34844015-34844247)
chr5 (99-333)||(40564939-40565170)
chr5 (182-301)||(6074550-6074669)
chr5 (99-333)||(14910458-14910691)
chr5 (123-333)||(32387588-32387796)
chr5 (153-330)||(28500841-28501018)
chr5 (121-333)||(8957327-8957538)
chr5 (136-333)||(29154356-29154552)
chr5 (109-306)||(37425133-37425324)
chr5 (99-333)||(20146001-20146231)
chr5 (111-333)||(15710653-15710876)
chr5 (99-323)||(13007791-13008013)
chr5 (99-274)||(34873960-34874134)
chr5 (99-329)||(41358138-41358357)
chr5 (99-330)||(34866526-34866760)
chr5 (135-237)||(34893822-34893923)
chr5 (99-270)||(13079244-13079413)
chr5 (99-242)||(32390520-32390662)
chr5 (175-333)||(17325444-17325602)
chr5 (120-333)||(28388890-28389103)
chr5 (194-333)||(12524446-12524585)
chr5 (99-323)||(13080252-13080476)
chr5 (99-237)||(41988251-41988388)
chr5 (232-303)||(2555163-2555234)
chr5 (202-313)||(42512792-42512903)
chr5 (230-333)||(7151040-7151143)
chr5 (99-162)||(37425095-37425158)
chr5 (208-332)||(14535105-14535229)
chr5 (232-333)||(23428489-23428590)
chr5 (256-333)||(32347497-32347574)
chr5 (175-264)||(35455266-35455355)
chr5 (294-333)||(3495139-3495178)
chr5 (232-303)||(6635485-6635556)
chr5 (225-280)||(17687429-17687484)
chr5 (291-333)||(11734619-11734661)
chr5 (256-333)||(29098050-29098127)
chr5 (190-242)||(25770795-25770847)
chr5 (252-320)||(39416053-39416121)
[»] scaffold0024 (1 HSPs)
scaffold0024 (99-333)||(36628-36856)
[»] scaffold0012 (1 HSPs)
scaffold0012 (99-333)||(244735-244966)
[»] scaffold0045 (1 HSPs)
scaffold0045 (99-333)||(9440-9672)
[»] scaffold0011 (1 HSPs)
scaffold0011 (113-333)||(11127-11344)
[»] scaffold0665 (1 HSPs)
scaffold0665 (99-272)||(970-1142)
[»] scaffold0157 (1 HSPs)
scaffold0157 (99-286)||(970-1156)
[»] scaffold0627 (1 HSPs)
scaffold0627 (110-272)||(6630-6789)
[»] scaffold0112 (1 HSPs)
scaffold0112 (191-333)||(25294-25436)
[»] scaffold1294 (1 HSPs)
scaffold1294 (189-333)||(962-1107)
[»] scaffold0150 (1 HSPs)
scaffold0150 (110-247)||(10179-10315)
[»] scaffold0340 (1 HSPs)
scaffold0340 (99-333)||(11558-11793)
[»] scaffold0018 (1 HSPs)
scaffold0018 (99-304)||(136885-137073)
[»] scaffold0023 (1 HSPs)
scaffold0023 (180-328)||(91191-91338)
[»] scaffold0155 (1 HSPs)
scaffold0155 (232-333)||(35321-35422)
[»] scaffold0056 (1 HSPs)
scaffold0056 (232-303)||(74401-74472)
[»] scaffold0388 (1 HSPs)
scaffold0388 (199-267)||(10147-10215)
[»] scaffold0009 (1 HSPs)
scaffold0009 (225-333)||(105264-105372)
[»] scaffold0999 (1 HSPs)
scaffold0999 (218-333)||(1921-2036)
[»] scaffold0121 (1 HSPs)
scaffold0121 (232-303)||(13058-13129)
[»] scaffold0432 (1 HSPs)
scaffold0432 (218-303)||(2255-2340)


Alignment Details
Target: chr2 (Bit Score: 175; Significance: 4e-94; HSPs: 89)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 7640371 - 7640138
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||    
T  7640371 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtctttcttgtttctctcaggtatttgatcggttcagatt 7640273  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| |||||||||||||||||||| | ||||||||| ||||||||||||||||||  ||||||| ||||| |||||||||    
T  7640272 gtcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggagacatggctattccggagatttaaatatagt 7640173  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||||||||||| |||||||||||||    
T  7640172 catatgtgtaggcatttgtaccttgccgttttatg 7640138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 25771544 - 25771777
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  25771544 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgatcagttcagatt 25771642  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    || |||||||||||||||||||||||||||||||||||| |||| | ||||||||| |||||||| ||| ||||| |||||||| ||||| |||||||||    
T  25771643 gttagatcagcttcgatccagtgtagatccaatcaatgattttggcgtcatccacgttgcagatctggatacatggttattccggagatttaaatatagt 25771742  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||| || ||||||||||||||||||||    
T  25771743 catatgtgtagacaattgtactttgccgttttatg 25771777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 43566973 - 43567205
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||| ||||||||    
T  43566973 gtgatttcgtcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttaatcgcttcagatt 43567070  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| ||||||||||||||||||||   ||||||||| |||||||||||| ||||| |||||||| ||||| |||||||||    
T  43567071 gtcagatcagcttcgatccagtgcagatccaatcaatgactttggtgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagt 43567170  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||||||||||||||||||||||||||    
T  43567171 catatgtgtaggcatttgtactttgccgttttatg 43567205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 109 - 333
Target Start/End: Complemental strand, 43929305 - 43929082
Alignment:
Q  109 cgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcag 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  43929305 cgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtctttcttgtttctatcaggtatttgatcggttcagattgttagatcag 43929207  T
Q  209 cttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtata 308  Q
     ||||||| |||| |||| ||||||||||||||| | ||||||||| ||||||||||||||||||| ||||||| ||||| |||||||||||||||| ||    
T  43929206 tttcgatcaagtgcagattcaatcaatgactttggcgtcatccacgttgcagatccggagacatgactattccggagatttaaatatagtcatatgtgta 43929107  T
Q  309 ggcatttgtactttgccgttttatg 333  Q
    ||||||||||| |||||||||||||    
T  43929106 ggcatttgtaccttgccgttttatg 43929082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 36508029 - 36508261
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||  ||||||||    
T  36508029 gtgatttcgtcgtcttcgtgcgacgttggtt-gttcgttgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgatcacttcagatt 36508126  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| |||||||||||||||||||| | ||||||||| |||||||||||| ||||| |||||||  ||||| |||||||||    
T  36508127 gtcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggaaacatggttattccagagatttaaatatagt 36508226  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||||||||||||||||||||||||||    
T  36508227 catatgtgtaggcatttgtactttgccgttttatg 36508261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 25516592 - 25516824
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||  ||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| ||||||||    
T  25516592 gtgatttcttcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacatt-gtttgtttttcttgtttctctcaggtatttgatcgcttcagatt 25516689  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||||||||||| |||||||| |||||||||||||||||||| | ||||||||| |||||||||||| |||||  ||||||| ||||| |||||||||    
T  25516690 gtcagatcagcttcaatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggaaacatggctattccggagatttaaatatagt 25516789  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||||||||||||||||||||||||||    
T  25516790 catatgtgtaggcatttgtactttgccgttttatg 25516824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 27024154 - 27023921
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||  ||||||||    
T  27024154 gtgatttcgtcgtcttcgtgcgacattggtttgttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgatcaattcagatt 27024056  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| ||||||||||||||||||||   ||||||||| |||||||||||| ||||| |||||||| ||||| |||||||||    
T  27024055 gtcagatcagcttcgatccagtgcagatccaatcaatgactttggagtcatccacgttgcagatccggatacatggttattccggagatttaaatatagt 27023956  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| | |||| |||||||||||| |||||||    
T  27023955 catatgtgtgggcaattgtactttgccattttatg 27023921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 99 - 329
Target Start/End: Original strand, 38822172 - 38822400
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||    
T  38822172 gtgatttcgtcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgatcgcttcagatt 38822269  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    | |||||  |||||||||||||| |||||||||||||||||||||| ||||||| | |||||||||||| ||||| |||||||| ||||| |||||||||    
T  38822270 gccagatttgcttcgatccagtgcagatccaatcaatgactttgacgtcatccatgttgcagatccggaaacatggttattccggagatttaaatatagt 38822369  T
Q  299 catatgtataggcatttgtactttgccgttt 329  Q
    ||||||| |||||||||||||||||||||||    
T  38822370 catatgtgtaggcatttgtactttgccgttt 38822400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 44167725 - 44167493
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||  |||| |||||||||| |||| |||    
T  44167725 gtgatttcgtcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttcgctcagctatttgatcgcttcaaatt 44167628  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||| |||||||||||| ||||| |||||||  ||||| |||||||||    
T  44167627 gtcagatcagcttcaatccagtgcagatccaatcaatgactttgacgtcatccacgttgcagatccggaaacatggttattccagagatttaaatatagt 44167528  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||||||||||||||||||||||||||    
T  44167527 catatgtgtaggcatttgtactttgccgttttatg 44167493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 5930522 - 5930755
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  5930522 gtgatttcgtcgtcttcgtgcgatgttggtttgttcgtcgtttttgtgcgacgtt-gtttgtttttcttgtttctatcatgtatttgatcggttcagatt 5930620  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    || |||||||||||||||||||| ||||||||||||||| ||||   | ||||||| |||||||||||||||||| |||||||| ||||| |||||| ||    
T  5930621 gtgagatcagcttcgatccagtgcagatccaatcaatgattttggtgttatccacgttgcagatccggagacatggttattccggagatttaaatatggt 5930720  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||||||||||| |||| |||||||||    
T  5930721 catatgtgtaggcatttgtattttgtcgttttatg 5930755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 27191351 - 27191115
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||    
T  27191351 gtgatttcgtcgtcttcgtacgacgttggtt-gttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgatcgcttcagatt 27191254  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatga----ttattccgaagattgaaata 294  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||| ||| |||||     |||||||| ||||| |||||    
T  27191253 gtcagatcagcttcgatccagtgtagatccaatcaatgactttggcgtcatccacgttgcagatctggaaacatgcatggttattccggagatttaaata 27191154  T
Q  295 tagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  27191153 tagtcatatgtgtaggcatttgtactttaccgttttatg 27191115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 27841165 - 27840929
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||    
T  27841165 gtgatttcgtcgtcttcgtacgacgttggtt-gttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgatcgcttcagatt 27841068  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatga----ttattccgaagattgaaata 294  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||| ||| |||||     |||||||| ||||| |||||    
T  27841067 gtcagatcagcttcgatccagtgtagatccaatcaatgactttggcgtcatccacgttgcagatctggaaacatgcatggttattccggagatttaaata 27840968  T
Q  295 tagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  27840967 tagtcatatgtgtaggcatttgtactttaccgttttatg 27840929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 111 - 333
Target Start/End: Original strand, 41176970 - 41177190
Alignment:
Q  111 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagct 210  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||| |||| |||||||||||||||    
T  41176970 tcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaagtatttgatcgcttcaaattgtcagatcagct 41177067  T
Q  211 tcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtatagg 310  Q
    ||||||||||| |||||||||||||||||||| | ||||||||| ||||||| || | ||||| |||||||| ||||| ||||||| |||||||| ||||    
T  41177068 tcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagattcgaaaacatggttattccggagatttaaatatattcatatgtgtagg 41177167  T
Q  311 catttgtactttgccgttttatg 333  Q
    |||||||||||||||||||||||    
T  41177168 catttgtactttgccgttttatg 41177190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 3603084 - 3603317
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||   |||||||| |||| ||||||||| ||||| |||    
T  3603084 gtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtttggtttgtttctctcagatatttgatccgttcaaatt 3603182  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |  | |||| ||||||||||||| |||||||||||||||||||||| ||||||| | |||||||||| ||||||| |||||||| ||||| |||||||||    
T  3603183 gctatatcaacttcgatccagtgcagatccaatcaatgactttgacgtcatccatgttgcagatccgaagacatggttattccggagatttaaatatagt 3603282  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||||||||||||||||||||||||||    
T  3603283 catatgtgtaggcatttgtactttgccgttttatg 3603317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 3390531 - 3390755
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||     ||||     |||||| |||||||||||||| |||||||||    
T  3390531 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-----gttt-----gtttctctcaggtatttgatcagttcagatt 3390620  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||| ||||||||||||||| |||||||||||||||||||| | ||||||||| |||||||||||| ||||| |||||||| ||||| ||||||||     
T  3390621 gtcagataagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggatacatggttattccggagatttaaatatagc 3390720  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
     |||||| |||||| ||||||||||||||||||||    
T  3390721 tatatgtgtaggcaattgtactttgccgttttatg 3390755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 6089990 - 6090221
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||| ||||||| |||| || ||||||||||||||| ||||||||||||||||||| |||| |||||||||| ||||||||    
T  6089990 gtgatttcgtcgtcttcgtgcgatgttggtt-gttcatcttctttgtgcgacgtt-gtttgtttttcttgtttctctcagatatttgatcgcttcagatt 6090087  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| | |||||||||||||||||    ||||||||| |||||||||||| ||||| |||||||  ||||| |||||||||    
T  6090088 gtcagatcagcttcgatccagtgcatatccaatcaatgactttagtgtcatccacgttgcagatccggaaacatggttattccagagatttaaatatagt 6090187  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||| ||| || ||||||||||||||||||||||||    
T  6090188 cat-tgtgtatgcatttgtactttgccgttttatg 6090221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 132 - 333
Target Start/End: Original strand, 3465061 - 3465261
Alignment:
Q  132 ttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaat 231  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  3465061 ttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaagtatttgatcgcttcagattgtcagatcagcttcgatccagtgcagatccaat 3465159  T
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    |||||| |||| | ||||||||| ||||||||| || ||||| ||||| || ||||| |||||||||||||||| ||| ||||||||||||| |||||||    
T  3465160 caatgattttggcgtcatccacgttgcagatccagaaacatggttatttcggagatttaaatatagtcatatgtgtagacatttgtactttgtcgtttta 3465259  T
Q  332 tg 333  Q
    ||    
T  3465260 tg 3465261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 104 - 333
Target Start/End: Original strand, 10589199 - 10589427
Alignment:
Q  104 ttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcag 203  Q
    |||| |||||| ||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||   || |||||||| |||||||||| ||||||    
T  10589199 ttcgtcgtctttgtgcgacgttgttttgttcgtcgtctttgtgcgacgtt-gtttgtctttcttgttttgttcgggtatttgttcggttcagagtgtcag 10589297  T
Q  204 atcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatat 303  Q
    |||||||| ||||||||| ||||| ||||||||||||||   ||||| ||| |||||||||||||||| |  ||||||||||| | ||||||||||||||    
T  10589298 atcagctttgatccagtgcagatcaaatcaatgactttggagtcatcaacgttgcagatccggagacaagggtattccgaagacttaaatatagtcatat 10589397  T
Q  304 gtataggcatttgtactttgccgttttatg 333  Q
    |||||||| ||  |||||||||||||||||    
T  10589398 gtataggctttaatactttgccgttttatg 10589427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 103 - 241
Target Start/End: Original strand, 44951522 - 44951659
Alignment:
Q  103 tttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtca 202  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  44951522 tttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtacgacgtt-gtttgtttttcttgtttctctcaggtatttgatcggttcagattgtca 44951620  T
Q  203 gatcagcttcgatccagtgtagatccaatcaatgacttt 241  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  44951621 gatcagcttcgatccagtgcagatccaatcaatgacttt 44951659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 104 - 333
Target Start/End: Complemental strand, 16720858 - 16720630
Alignment:
Q  104 ttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcag 203  Q
    |||| |||||| |||||||||| |||||||||||||||||||| |||||| |||||||||||||||| || ||||||||||| |||||||||||| |||     
T  16720858 ttcgtcgtctttgtgcgacgttagtttgttcgtcgtctttgtgtgacgtt-gtttgtttttcttgttactttcaggtatttgttcggttcagattatcaa 16720760  T
Q  204 atcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatat 303  Q
    |||||||| ||||  ||| |||||||||||| || |||| | ||||||||| ||||||||| || |||||||||||| | ||| | ||||||||||||||    
T  16720759 atcagctttgatctcgtgcagatccaatcaacgattttggcttcatccacgttgcagatccagatacatgattattctggagacttaaatatagtcatat 16720660  T
Q  304 gtataggcatttgtactttgccgttttatg 333  Q
    || ||||||||||||||||| | |||||||    
T  16720659 gtgtaggcatttgtactttgtcattttatg 16720630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 7443581 - 7443348
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||   || |||||||| ||||||||||||    
T  7443581 gtgatttcgccgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgtt-gtttgtctttcttgttttgttcgggtatttgttcggttcagatt 7443483  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    || ||||||||||| |||||||| ||||| ||||||||||||||   ||||| ||| |||||||||||||| | |  ||||||| | | | ||||||| |    
T  7443482 gtaagatcagcttcaatccagtgcagatcaaatcaatgactttggagtcatcaacgttgcagatccggagataagggtattccggaaacttaaatataat 7443383  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||| || ||||||| | ||||||||    
T  7443382 catatgtgtaggctttagtactttacagttttatg 7443348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 99 - 229
Target Start/End: Complemental strand, 16879980 - 16879851
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  16879980 gtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgatcggttcagatt 16879882  T
Q  199 gtcagatcagcttcgatccagtgtagatcca 229  Q
    ||||||||| ||||||||||||| |||||||    
T  16879881 gtcagatcaacttcgatccagtgcagatcca 16879851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 99 - 229
Target Start/End: Complemental strand, 16992113 - 16991984
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  16992113 gtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgatcggttcagatt 16992015  T
Q  199 gtcagatcagcttcgatccagtgtagatcca 229  Q
    ||||||||| ||||||||||||| |||||||    
T  16992014 gtcagatcaacttcgatccagtgcagatcca 16991984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 25623060 - 25622826
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttc-ttgtttctatcaggtatttgatcggttcagat 197  Q
    ||||||||| |||||| ||||||| ||| ||||||||||||||||||||| |||| |||||| |||| ||||||   ||||||||||  |||||||||||    
T  25623060 gtgatttcgtcgtcttagtgcgacattgttttgttcgtcgtctttgtgcggcgtt-gtttgtctttccttgttttactcaggtattttttcggttcagat 25622962  T
Q  198 tgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatag 297  Q
    ||||| |||||||| ||| ||||| |||| ||||||||||||||||| || || ||| | ||||| || |||||||| ||||||| ||| |  |||||||    
T  25622961 tgtcatatcagcttagattcagtgcagattcaatcaatgactttgacgtcgtcaacgttacagattcgaagacatgagtattccggagactttaatatag 25622862  T
Q  298 tcatatgtataggcatttgtactttgccgttttatg 333  Q
    |||||||| ||||| ||||||||||| |||||||||    
T  25622861 tcatatgtgtaggcttttgtactttgacgttttatg 25622826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 19581017 - 19580784
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | |||||| ||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||||   ||||||||||| ||| ||||||||    
T  19581017 gtgattttgtcgtcttagtgcgacattgttttgttcgtcgtctttgtgcgacgtt-gtttgttttttttgttttgttcaggtatttgttcgattcagatt 19580919  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||   |  || ||| ||||||||||||||||||  ||||||| ||| | ||||||| |    
T  19580918 gtcagatcagcttcgatccagtgcatatcaaatcaatgactttggagttgtcaacgttgcagatccggagacatggatattccggagacttaaatataat 19580819  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||| | ||| | || ||||||||| ||||||||    
T  19580818 catatctgtagactttagtactttgcagttttatg 19580784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 99 - 332
Target Start/End: Original strand, 26491401 - 26491632
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| ||||||||||| ||||||  ||||||||||| |||||| |||||| |||||||||||  |||| |||||| ||| ||||||||    
T  26491401 gtgatttcgtcgtcttagtgcgacgttgttttgtttttcgtctttgtgtgacgtt-gtttgtgtttcttgtttcgttcag-tatttgttcgattcagatt 26491498  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||||||||||||||| |||| ||||| ||||||||||||||   || || ||| ||||||||||||||||||   |||||| ||| | |||||||||    
T  26491499 gtcagatcagcttcgatctagtgcagatcaaatcaatgactttggagtcgtcaacgttgcagatccggagacatgggcattccggagacttaaatatagt 26491598  T
Q  299 catatgtataggcatttgtactttgccgttttat 332  Q
    ||||||| ||||| || |||||||| ||| ||||    
T  26491599 catatgtgtaggctttagtactttgtcgtgttat 26491632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 109 - 333
Target Start/End: Complemental strand, 4878741 - 4878518
Alignment:
Q  109 cgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcag 208  Q
    |||||| |||||| |||| |||||||||||||||||||||||||| |||||| ||||||| |||  | ||||||||| |||||||||||||||| |||||    
T  4878741 cgtctttgtgcgatgttgttttgttcgtcgtctttgtgcgacgtt-gtttgtctttcttgcttcgtttaggtatttgttcggttcagattgtcatatcag 4878643  T
Q  209 cttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtata 308  Q
    ||||||||||||| ||||| ||||||||||||||   ||||| | | |||||||  |||||||| | |||||||  || | |||||||||||||||| ||    
T  4878642 cttcgatccagtgcagatcaaatcaatgactttggactcatcaatgttgcagatatggagacatcagtattccggtgacttaaatatagtcatatgtgta 4878543  T
Q  309 ggcatttgtactttgccgttttatg 333  Q
    ||| || ||||||  ||||||||||    
T  4878542 ggctttagtacttgaccgttttatg 4878518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 133 - 333
Target Start/End: Complemental strand, 15673949 - 15673750
Alignment:
Q  133 tcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatc 232  Q
    ||||||||||||||||||||| |||||| |||||||||||  |||||| |||| ||| |||||||||||| ||||||||||||||||| |||||| ||||    
T  15673949 tcgtcgtctttgtgcgacgtt-gtttgtctttcttgtttcgttcaggtttttgttcgattcagattgtcatatcagcttcgatccagtatagatcaaatc 15673851  T
Q  233 aatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttat 332  Q
    ||||||||||   || || | | |||||||| |||||||||  ||||||| ||| | |||||||||||||||| ||||| || ||| |||||||||||||    
T  15673850 aatgactttggagtcgtcaatgttgcagatctggagacatggatattccggagacttaaatatagtcatatgtgtaggctttagtattttgccgttttat 15673751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 110 - 333
Target Start/End: Original strand, 37883763 - 37883985
Alignment:
Q  110 gtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagc 209  Q
    ||||| ||||||||||| |||||||||||||||||||||| ||| |||||| |||||||||||  | | ||||||| ||| |||||||||||| ||||||    
T  37883763 gtcttagtgcgacgttgttttgttcgtcgtctttgtgcgatgtt-gtttgtctttcttgtttcgttgacgtatttgttcgattcagattgtcatatcagc 37883861  T
Q  210 ttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtatag 309  Q
    || |||||| || ||||| ||||||||||||||   || || ||| ||||||| ||||||||||| |||||   | | | |||||||||||||||| |||    
T  37883862 tttgatccaatgcagatcaaatcaatgactttggagtcgtcaacgttgcagatacggagacatgagtattctagatacttaaatatagtcatatgtgtag 37883961  T
Q  310 gcatttgtactttgccgttttatg 333  Q
    || || ||||||||||||||||||    
T  37883962 gctttagtactttgccgttttatg 37883985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 35353742 - 35353972
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttt-tcttgtttctatcaggtatttgatcggttcagat 197  Q
    ||||||||| |||||| ||||||||||| |||||| |||||||||||||||||||||| | ||   |||||||     ||||| |||| || | | ||||    
T  35353742 gtgatttcgtcgtcttagtgcgacgttgttttgtttgtcgtctttgtgcgacgtttgtcttttccctcttgtt-----caggtgtttgttcagattagat 35353836  T
Q  198 tgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatag 297  Q
    |||||||||| ||||||||||||| |||||||| ||||||||||| | ||||| ||| ||||||||||||| ||||| |||| || |||||  |||||||    
T  35353837 tgtcagatcatcttcgatccagtgcagatccaaccaatgactttggcgtcatcaacgttgcagatccggaggcatgactatttcggagattttaatatag 35353936  T
Q  298 tcatatgtataggcatttgtactttgccgttttatg 333  Q
    |||||| ||||||| | |||||||||  ||||||||    
T  35353937 tcatatttataggcttatgtactttgttgttttatg 35353972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 2251360 - 2251129
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgttttt---cttgtttctatcaggtatttgatcggttcag 195  Q
    ||||||||| |||||| |||||||| || |||||| ||||||||||||||||||| |||||| |||   ||||||      |||| |||| ||  |||||    
T  2251360 gtgatttcgtcgtcttagtgcgacgctgttttgtttgtcgtctttgtgcgacgtt-gtttgtcttttcccttgttg-----aggtgtttgttcaattcag 2251267  T
Q  196 attgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatat 295  Q
    |||||||||||||||||||||||||| | |||||| ||||||||||| | ||||| ||| |||||||||| || |||| |||||||| |||||  |||||    
T  2251266 attgtcagatcagcttcgatccagtgcaaatccaaccaatgactttggcgtcatcaacgttgcagatccgaaggcatggttattccggagattttaatat 2251167  T
Q  296 agtcatatgtataggcatttgtactttgccgttttatg 333  Q
    |||||||| | ||||| | |||||||||| ||||||||    
T  2251166 agtcatatttgtaggcttatgtactttgcagttttatg 2251129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 5071385 - 5071152
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgt-ttttcttgtttctatcaggtatttgatcggttcagat 197  Q
    ||||||||| | |||| |||| |||||| |||||| |||||||||||||||| ||||||||| ||||||   || | |||||| |||| |||||||||||    
T  5071385 gtgatttcgtcatcttagtgcaacgttgttttgtttgtcgtctttgtgcgac-tttgtttgtcttttctctcttgt-tcaggtgtttgttcggttcagat 5071288  T
Q  198 tgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatag 297  Q
    |||||||||| |||||||| ||||||||||||| | ||||||||| | ||||| ||| ||||||||||||| ||||  ||||||| | |||  |||||||    
T  5071287 tgtcagatcaacttcgatctagtgtagatccaaccgatgactttggcgtcatcaacgttgcagatccggaggcatggctattccggatattttaatatag 5071188  T
Q  298 tcatatgtataggcatttgtactttgccgttttatg 333  Q
    |||||| | ||||| | |||| | ||||||||||||    
T  5071187 tcatatttgtaggcttatgtattatgccgttttatg 5071152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 109 - 335
Target Start/End: Original strand, 13268681 - 13268906
Alignment:
Q  109 cgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcag 208  Q
    |||||| ||||||||||| |||||||||||||||||||||||||| |||||| ||| | |||||    ||||||||  ||| |||||||||||||||||     
T  13268681 cgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgtt-gtttgtctttttcgtttcgtctaggtatttattcgattcagattgtcagatcaa 13268779  T
Q  209 cttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtata 308  Q
    ||| |||||| || | |||||||||| ||||||| | || || ||| || |||||||| ||||||| ||||||  ||| |  |||||||||| |||| ||    
T  13268780 ctttgatccaatgcatatccaatcaacgactttggcgtcttcaacgttgaagatccggggacatgagtattccagagacttgaatatagtcacatgtgta 13268879  T
Q  309 ggcatttgtactttgccgttttatgat 335  Q
     || |||||||||||| ||||||||||    
T  13268880 agcttttgtactttgctgttttatgat 13268906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 116 - 333
Target Start/End: Original strand, 28228338 - 28228554
Alignment:
Q  116 gtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgat 215  Q
    |||||| ||||||||||||||  ||||||||||   ||||||||| |||||||||||  ||| ||||||| |||||||||||||||| |||||||| |||    
T  28228338 gtgcgatgttggtttgttcgttatctttgtgcggt-tttgtttgtctttcttgtttcgttcaagtatttgttcggttcagattgtcatatcagctttgat 28228436  T
Q  216 ccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgatta-ttccgaagattgaaatatagtcatatgtataggcatt 314  Q
    ||| || |||||||||||||||||||| | ||  ||||| || ||||||| |||||||| || ||| || | ||| ||||||||||||||| ||||| ||    
T  28228437 ccaatgcagatccaatcaatgactttggcgtcgcccacgttgtagatccgaagacatgagtatttcagaggcttg-aatatagtcatatgtgtaggcttt 28228535  T
Q  315 tgtactttgccgttttatg 333  Q
    | ||||||| ||| |||||    
T  28228536 tttactttgtcgtattatg 28228554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 197 - 333
Target Start/End: Complemental strand, 18141406 - 18141263
Alignment:
Q  197 ttgtcagatcagcttcgatccagtgtagatcc-------aatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattg 289  Q
    |||| |||| ||||||||||||||| ||||||       |||||||||||||| | || |||||| |||||||||||||||||| |||||||| |||||     
T  18141406 ttgttagatgagcttcgatccagtgcagatccggagattaatcaatgactttggcgtcctccacgttgcagatccggagacatggttattccggagattt 18141307  T
Q  290 aaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  18141306 aaatatagtcatatgtgtaggcatttgtactttgccgttttatg 18141263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 99 - 332
Target Start/End: Original strand, 29734289 - 29734523
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | |||||| ||| ||||||| |||||| |||||| |||| ||||||| ||||||  |||| |||||  ||| | ||||| ||| ||||||||    
T  29734289 gtgattttgtcgtcttagtgtgacgttgttttgtttgtcgtcgttgtacgacgtt-gtttgtccttctggtttcgttcaaggatttgttcgattcagatt 29734387  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaa--atata 296  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||||   || || ||| || |||||||||||||||| ||||||| ||| | ||  |||||    
T  29734388 gtcagatcaacttcgatccagtgcagatcaaatcaatgactttggagtcgtcaacgttgaagatccggagacatgagtattccggagacttaaatatata 29734487  T
Q  297 gtcatatgtataggcatttgtactttgccgttttat 332  Q
    ||||||||  ||| | || |||||||||||||||||    
T  29734488 gtcatatggctagactttagtactttgccgttttat 29734523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 99 - 241
Target Start/End: Original strand, 24500586 - 24500727
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | |||||| ||||||| ||  |||||||||||||||||||||||||| |||||| ||||||||||   ||| ||||||| ||||||||||||    
T  24500586 gtgatttggtcgtcttagtgcgaccttattttgttcgtcgtctttgtgcgacgtt-gtttgtctttcttgttttgttcatgtatttgttcggttcagatt 24500684  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgacttt 241  Q
     |||||||||||||||||||||| ||||| ||| |||||||||    
T  24500685 atcagatcagcttcgatccagtgcagatcaaatgaatgacttt 24500727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 121 - 273
Target Start/End: Complemental strand, 11550589 - 11550437
Alignment:
Q  121 acgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagt 220  Q
    |||||| |||||| |||||||||||||| ||||| ||||| |||||||||||  ||| ||||||| |||||||||||||||||| || ||| ||||||||    
T  11550589 acgttgttttgtttgtcgtctttgtgcggcgttt-tttgtctttcttgtttcgttcaagtatttgttcggttcagattgtcagaacaacttagatccagt 11550491  T
Q  221 gtagatcc-aatcaatgactttgacatcatccacgctgcagatccggagacatg 273  Q
    |||||||| |||||||||||||| | || || ||| |||||||||| |||||||    
T  11550490 gtagatccaaatcaatgactttggcgtcgtcaacgttgcagatccgaagacatg 11550437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 100 - 333
Target Start/End: Complemental strand, 25237340 - 25237113
Alignment:
Q  100 tgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattg 199  Q
    |||||||| |||||| ||||||||||| ||||||||||||||||||||||| || |||||||||| | |||     | |||||||| ||| ||||| |||    
T  25237340 tgatttcgtcgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacatt-gtttgtttttttcgtt-----cgggtatttgttcgattcaggttg 25237247  T
Q  200 tcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtc 299  Q
     |||||||||||| |||||||| |||| ||||||||||||||    || || ||| |||| || ||||||||||| ||||| |  || | ||||||| ||    
T  25237246 ccagatcagcttcaatccagtgcagattcaatcaatgacttttgagtcgtcaacgttgcaaattcggagacatgagtattcgggggacttaaatataatc 25237147  T
Q  300 atatgtataggcatttgtactttgccgttttatg 333  Q
    |||||| ||||| ||| || ||||||||||||||    
T  25237146 atatgtgtaggcttttctattttgccgttttatg 25237113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 153 - 333
Target Start/End: Original strand, 20036534 - 20036714
Alignment:
Q  153 ttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatcca 252  Q
    |||||||| |||||||||||  ||||||||||| || ||||||||||||||||  |||||||||||||| |||||||||||||||||||| |  | || |    
T  20036534 ttgtttgtctttcttgtttcgttcaggtatttgttcagttcagattgtcagattggcttcgatccagtgcagatccaatcaatgactttggcgccgtcaa 20036633  T
Q  253 cgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    || |||||||||| |||||||  ||||||| ||| |   ||||||||  |||| ||||| | |||||||| ||||||||||    
T  20036634 cgttgcagatccgaagacatgggtattccgtagacttggatatagtctaatgtgtaggcttctgtactttaccgttttatg 20036714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 177 - 335
Target Start/End: Complemental strand, 31125317 - 31125159
Alignment:
Q  177 aggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgatt 276  Q
    |||| |||| ||| |||||||||||| |||| |||||||  ||||||||||||||||||||||||| | ||||| | | ||||||| ||||| ||||| |    
T  31125317 aggtgtttgttcgattcagattgtcatatcaacttcgatttagtgtagatccaatcaatgactttggcgtcatcaatgttgcagattcggaggcatgact 31125218  T
Q  277 attccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatgat 335  Q
    |||||| |||||  |||||||| |||| | ||||| | |||||||||||||||||||||    
T  31125217 attccggagattttaatatagttatatttgtaggcttatgtactttgccgttttatgat 31125159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 9715559 - 9715326
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| || | |||||| |||||| ||| |||||||||| | || |||||| |||||||||||  ||||||||||| | |||||| |||    
T  9715559 gtgatttcgtcgtcttagtacaacgttgatttgtttgtcatctttgtgcggcatt-gtttgtctttcttgtttcgttcaggtatttgtttggttcaaatt 9715461  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||| ||||| ||| |||||||| | |||||||||||||||||| | |  |||||| || | |||| |||||||   ||||||| ||| |  ||||||||    
T  9715460 gtcatatcagattcaatccagtgcatatccaatcaatgactttggcgttctccacgttgtaaatccagagacatagatattccgcagacttgaatatagt 9715361  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    || | || ||||| ||||||||||| |||| ||||    
T  9715360 caaacgtgtaggcttttgtactttgtcgttatatg 9715326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 273
Target Start/End: Complemental strand, 29812629 - 29812457
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| ||||||||| | |||||||||||||||||||||  ||| |||| | |||||||||||  |||||||| || ||||||| ||||    
T  29812629 gtgatttcgtcgtcttagtgcgacgt-gttttgttcgtcgtctttgtgcggtgtt-gtttttctttcttgtttcattcaggtatgtgttcggttcggatt 29812532  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatg 273  Q
    || | ||||| || ||||||||| ||||||||||||||| ||||  ||| || ||| |||||||||| |||||||    
T  29812531 gttatatcagtttagatccagtgcagatccaatcaatgattttggaatcgtcaacgttgcagatccgaagacatg 29812457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 3397994 - 3397761
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgt-ttttcttgtttctatcaggtatttgatcggttcagat 197  Q
    ||||||||| |||||| ||||||| ||| |||||  ||| |||||||||||| ||||||| | |||||    || | |||||| |||| ||  |||||||    
T  3397994 gtgatttcgtcgtctttgtgcgacattgttttgtctgtcatctttgtgcgac-tttgtttatcttttccctcttgt-tcaggtgtttgttcaattcagat 3397897  T
Q  198 tgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatag 297  Q
    |||||||||| ||||||||||||| |||| ||| ||||||||||| | ||||| ||  ||||||||||||||||||  |||| || |||||  |||||||    
T  3397896 tgtcagatcatcttcgatccagtgcagattcaaccaatgactttggcgtcatcaacattgcagatccggagacatggctatttcggagattttaatatag 3397797  T
Q  298 tcatatgtataggcatttgtactttgccgttttatg 333  Q
    |||||| | || || | ||||||||| |||||||||    
T  3397796 tcatatttgtatgcttatgtactttgtcgttttatg 3397761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 109 - 333
Target Start/End: Complemental strand, 17068920 - 17068698
Alignment:
Q  109 cgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcag 208  Q
    |||||| ||||||||||| |||||||||||||||||||||  ||| |||||| ||| |||||||  |  |||||||  ||  || | ||||| |||||||    
T  17068920 cgtcttagtgcgacgttgttttgttcgtcgtctttgtgcggtgtt-gtttgtcttttttgtttcgtttgggtatttattcctttaa-attgttagatcag 17068823  T
Q  209 cttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattcc-gaagattgaaatatagtcatatgtat 307  Q
    |||| |||||||| ||||| || |||||| |||||| || || ||| |||| ||||| |||||||  |||| | |||| ||||| ||||||||||||| |    
T  17068822 cttcaatccagtgcagatcaaaacaatgattttgacgtcgtcgacgttgcatatccgtagacatgggtatttcagaagcttgaa-tatagtcatatgtgt 17068724  T
Q  308 aggcatttgtactttgccgttttatg 333  Q
    || | |||||||||||||||||||||    
T  17068723 agacttttgtactttgccgttttatg 17068698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 244
Target Start/End: Original strand, 19953672 - 19953812
Alignment:
Q  102 atttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtc 201  Q
    |||||| |||||| || ||||||||  ||||| |||||||||||||| |||| |||||| ||||||||||   ||| ||||||| |||||||||||||||    
T  19953672 atttcgtcgtcttagtacgacgttgtgttgtttgtcgtctttgtgcggcgtt-gtttgtctttcttgttttgttcaagtatttgttcggttcagattgtc 19953770  T
Q  202 agatcagcttcgatccagtgtagatccaatcaatgactttgac 244  Q
    |||||| |||  ||||| || |||| |||||||||||||||||    
T  19953771 agatcatcttaaatccaatgcagat-caatcaatgactttgac 19953812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 333
Target Start/End: Complemental strand, 17118817 - 17118596
Alignment:
Q  110 gtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagc 209  Q
    ||||| ||||||||||| |||||||||||||||||||||  ||| |||||| ||| |||||||  |  |||||||  ||  || ||||||||||||||||    
T  17118817 gtcttagtgcgacgttgttttgttcgtcgtctttgtgcggtgtt-gtttgtcttttttgtttcgtttgggtatttattccttt-agattgtcagatcagc 17118720  T
Q  210 ttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgatta-ttccgaagattgaaatatagtcatatgtata 308  Q
    ||| ||| |||| ||||| || |||||| |||||| |  || ||| |||| || || |||||||  || ||| |||| ||| ||||||||||||||| ||    
T  17118719 ttcaatctagtgcagatcaaaacaatgattttgacgttgtcaacgttgcatattcgtagacatgggtatttcagaagcttg-aatatagtcatatgtgta 17118621  T
Q  309 ggcatttgtactttgccgttttatg 333  Q
    ||| ||||||||||| |||||||||    
T  17118620 ggcgtttgtactttgtcgttttatg 17118596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 218 - 333
Target Start/End: Original strand, 15920091 - 15920206
Alignment:
Q  218 agtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgt 317  Q
    |||| |||||| ||||||||||||| | || || ||| |||||||||||| |||||| |||| |||||| |  ||||||||||||| | ||||||| |||    
T  15920091 agtgcagatccgatcaatgactttggcgtcgtcaacgttgcagatccggaaacatgagtatttcgaagacttgaatatagtcatatttgtaggcatatgt 15920190  T
Q  318 actttgccgttttatg 333  Q
    ||||||||||||||||    
T  15920191 actttgccgttttatg 15920206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 210 - 332
Target Start/End: Original strand, 34480173 - 34480296
Alignment:
Q  210 ttcgatccagtgtagatccaatc-aatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtata 308  Q
    ||||||| |||| ||||||| || |||||||||| | ||||||||| ||||||||||||||||||| |||||||  || |  ||||||||||||||| ||    
T  34480173 ttcgatcaagtggagatccagtcgaatgactttggcgtcatccacgttgcagatccggagacatgagtattccggcgacttgaatatagtcatatgtgta 34480272  T
Q  309 ggcatttgtactttgccgttttat 332  Q
    ||  ||||||||||| ||||||||    
T  34480273 ggtttttgtactttgtcgttttat 34480296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 43929371 - 43929308
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgttt 162  Q
    ||||||||| |||||||||||||| ||||||||||||||||||| |||||||||| ||||||||    
T  43929371 gtgatttcgtcgtcttcgtgcgacattggtttgttcgtcgtcttcgtgcgacgttggtttgttt 43929308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 196 - 333
Target Start/End: Complemental strand, 17056388 - 17056251
Alignment:
Q  196 attgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattcc-gaagattgaaata 294  Q
    ||||| ||||||||||| |||||||| ||||| || |||||| |||||| || || ||| |||| ||||| |||||||  |||| | |||| ||||| ||    
T  17056388 attgttagatcagcttcaatccagtgcagatcaaaacaatgattttgacgtcgtcgacgttgcatatccgtagacatgggtatttcagaagcttgaa-ta 17056290  T
Q  295 tagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||||||| ||| | |||||||||||||||||||||    
T  17056289 tagtcatatgtgtagacttttgtactttgccgttttatg 17056251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 109 - 329
Target Start/End: Complemental strand, 17074917 - 17074699
Alignment:
Q  109 cgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcag 208  Q
    |||||| ||||||||||| ||||| |||||||||||||||  ||| |||||| ||| |||||||  |  |||||||  ||  || | ||||| |||||||    
T  17074917 cgtcttagtgcgacgttgttttgtccgtcgtctttgtgcggtgtt-gtttgtcttttttgtttcgtttgggtatttattcctttaa-attgttagatcag 17074820  T
Q  209 cttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattat-tccgaagattgaaatatagtcatatgtat 307  Q
    |||| |||||||| ||||| || |||||| |||||| || || ||| |||| ||| | |||||||  ||| || |||| ||||| ||||||||||||| |    
T  17074819 cttcaatccagtgcagatcaaaacaatgattttgacgtcgtcgacgttgcatatctgtagacatgggtatatcagaagcttgaa-tatagtcatatgtgt 17074721  T
Q  308 aggcatttgtactttgccgttt 329  Q
    || | |||||||||||||||||    
T  17074720 agacttttgtactttgccgttt 17074699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 333
Target Start/End: Original strand, 12366060 - 12366200
Alignment:
Q  193 cagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaa 292  Q
    |||||||||| |||||||||||| ||||| | ||| | ||||||||||||   ||| | | | ||||||||||||||||||| |||||||  || | |||    
T  12366060 cagattgtcaaatcagcttcgatgcagtgcaaatcaattcaatgactttggagtcaccaatgttgcagatccggagacatgagtattccggtgacttaaa 12366159  T
Q  293 tatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||| ||||||||| ||||| || |||||||  |||||||||    
T  12366160 tattgtcatatgtgtaggctttagtactttttcgttttatg 12366200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 330
Target Start/End: Original strand, 40125500 - 40125716
Alignment:
Q  111 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagct 210  Q
    |||| |||| |||||| ||||||  ||||||||||||||||||  ||||| |||||||||||  ||||||||||  ||| ||||||||||||||||||||    
T  40125500 tcttagtgcaacgttgttttgtttttcgtctttgtgcgacgttc-tttgtctttcttgtttcgttcaggtatttattcgattcagattgtcagatcagct 40125598  T
Q  211 tcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtatagg 310  Q
       ||||| ||   ||| ||||||||| |||    || || ||  |||||||||| |||||||  |||| |  | | | |||||||||||||||| ||||    
T  40125599 ctaatccaatg--catcaaatcaatgattttagagtcgtcgacattgcagatccgaagacatggatatttcatacacttaaatatagtcatatgtgtagg 40125696  T
Q  311 catttgtactttgccgtttt 330  Q
    | || |||||||||||||||    
T  40125697 ctttagtactttgccgtttt 40125716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 41842047 - 41842118
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgttt 171  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||  || |||||||| ||||||||||    
T  41842047 gtgatttcgtcgtcttagtgcgacgttggtttgttcgtcgtctttgtgctgcg-ttgtttgtctttcttgttt 41842118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 305
Target Start/End: Complemental strand, 42105719 - 42105576
Alignment:
Q  161 ttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcag 260  Q
    |||| |||||||  ||||||||||| ||| |||| ||||||| |||||||||||| ||||| ||||| ||||||||||||||   |  || ||| |||||    
T  42105719 ttttgttgtttcgttcaggtatttgttcgattcaaattgtcaaatcagcttcgattcagtgcagatcaaatcaatgactttggagttgtcaacgttgcag 42105620  T
Q  261 atccggagacatgattattccgaagattgaaatatagtcatatgt 305  Q
    || || ||||||| |||||||| ||| | ||||||| ||||||||    
T  42105619 at-cgaagacatggttattccggagacttaaatataatcatatgt 42105576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 232 - 303
Target Start/End: Original strand, 35333742 - 35333813
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatat 303  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||| |||||||||||   ||||||||||||||    
T  35333742 caatgactttgacgtcatcaacgttgcagatccggagacatgagtattccgaagacataaatatagtcatat 35333813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 109 - 333
Target Start/End: Complemental strand, 17095490 - 17095268
Alignment:
Q  109 cgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcag 208  Q
    |||||| ||||||||||| ||||||||||||||||||||   ||| |||||| ||| |||||||  |  |||||||  ||  || ||||||| |||||||    
T  17095490 cgtctttgtgcgacgttgttttgttcgtcgtctttgtgcagtgtt-gtttgtcttttttgtttcgtttgggtatttattccttt-agattgttagatcag 17095393  T
Q  209 cttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgatta-ttccgaagattgaaatatagtcatatgtat 307  Q
    |||| ||| |||| ||||| || |||| | |||||| || ||   | |||| ||||| |||||||  || ||| |||| ||| ||||||||||||||| |    
T  17095392 cttcaatctagtgcagatcaaaacaattattttgacgtcgtcattgttgcatatccgtagacatgggtatttcagaagcttg-aatatagtcatatgtgt 17095294  T
Q  308 aggcatttgtactttgccgttttatg 333  Q
    || | |||||||||||||||||||||    
T  17095293 agacttttgtactttgccgttttatg 17095268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 43929338 - 43929281
Alignment:
Q  104 ttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtt 161  Q
    |||| ||||||||||||||||||||||||| |||||||| |||||||||| |||||||    
T  43929338 ttcgtcgtcttcgtgcgacgttggtttgtttgtcgtcttcgtgcgacgttggtttgtt 43929281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 38384317 - 38384242
Alignment:
Q  256 tgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    |||||||||||||||||||  |||||| ||| | |||||||||||||| |||||||||  |||| |||||||||||    
T  38384317 tgcagatccggagacatgaggattccggagacttaaatatagtcatatttataggcataggtaccttgccgtttta 38384242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 333
Target Start/End: Complemental strand, 6431268 - 6431191
Alignment:
Q  256 tgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    |||||||| | |||||||| ||||||| ||| | |||||||||||||| | || |||| |||||||||||||||||||    
T  6431268 tgcagatctgaagacatgagtattccggagacttaaatatagtcatatttgtatgcatatgtactttgccgttttatg 6431191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 16720886 - 16720829
Alignment:
Q  104 ttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtt 161  Q
    ||||||||| | |||| | ||||||||||||||||||||||||||||||| |||||||    
T  16720886 ttcgccgtccttgtgcaatgttggtttgttcgtcgtctttgtgcgacgttagtttgtt 16720829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 333
Target Start/End: Original strand, 25068087 - 25068188
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    ||||||||||| | || || ||| |||||||||||||||| ||  |||||||||| |  ||||||||||||| | |||||||  |||| |||||||||||    
T  25068087 caatgactttggcgtcgtcaacgttgcagatccggagacaagaggattccgaagacttgaatatagtcatatttgtaggcataggtaccttgccgtttta 25068186  T
Q  332 tg 333  Q
    ||    
T  25068187 tg 25068188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 303
Target Start/End: Complemental strand, 8064679 - 8064599
Alignment:
Q  223 agatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatat 303  Q
    ||||||||||||| || ||||| || || ||| |||||||||||||| ||||||||| |||||| |  |||||||||||||    
T  8064679 agatccaatcaataacgttgacgtcttcaacgttgcagatccggagatatgattatttcgaagacttgaatatagtcatat 8064599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 333
Target Start/End: Complemental strand, 9207196 - 9207138
Alignment:
Q  275 ttattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    |||||||| ||||| |||||||||||||||| |||| ||||||  ||||||||||||||    
T  9207196 ttattccggagatttaaatatagtcatatgtgtaggaatttgtgttttgccgttttatg 9207138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 333
Target Start/End: Original strand, 11931162 - 11931204
Alignment:
Q  291 aatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||||||||||| ||||| |||||||||||||||||||||    
T  11931162 aatatagtcatatgtgtaggcttttgtactttgccgttttatg 11931204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 313
Target Start/End: Complemental strand, 10286891 - 10286810
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcat 313  Q
    ||||||||||||| |  || ||| ||||||||||||||||||| ||||||| |||   |||||||||||||| | |||||||    
T  10286891 caatgactttgacgttgtcaacgttgcagatccggagacatgagtattccggagacaaaaatatagtcatatttgtaggcat 10286810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 10589175 - 10589220
Alignment:
Q  108 ccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt 153  Q
    ||||||| ||| ||||||| ||||||||||||||||||||||||||    
T  10589175 ccgtcttagtgtgacgttgttttgttcgtcgtctttgtgcgacgtt 10589220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 16720918 - 16720857
Alignment:
Q  100 tgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtt 161  Q
    |||||||| |||||| |||||||||||||||||||| |||| |||||| | ||| |||||||    
T  16720918 tgatttcgtcgtctttgtgcgacgttggtttgttcgccgtccttgtgcaatgttggtttgtt 16720857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 803021 - 802961
Alignment:
Q  182 tttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttg 242  Q
    |||| |||||||||||||| ||| || |||||||| |||| ||||| ||||||||||||||    
T  803021 tttgttcggttcagattgttagaccatcttcgatcaagtgcagatctaatcaatgactttg 802961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 29812728 - 29812692
Alignment:
Q  1 agggtcaatttttggcacaaaatcacccctctaactc 37  Q
    |||||||||||||| ||||||||||||||||||||||    
T  29812728 agggtcaatttttgacacaaaatcacccctctaactc 29812692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 32347607 - 32347563
Alignment:
Q  190 gttcagattgtcagatcagcttcgatccagtgtagatccaatcaa 234  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||||    
T  32347607 gttcagattgtcagatcaggttcgatctagtatagatccaatcaa 32347563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 335
Target Start/End: Complemental strand, 9978553 - 9978450
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    |||||| |||| | ||||| ||| ||||||||||||||||||| ||||||  |||   |||||| ||||||| | ||||| |  ||||||| ||||||||    
T  9978553 caatgattttggcgtcatcaacgttgcagatccggagacatgagtattccagagacataaatatcgtcatatttgtaggcgtaagtacttttccgtttta 9978454  T
Q  332 tgat 335  Q
    ||||    
T  9978453 tgat 9978450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 303
Target Start/End: Complemental strand, 17268010 - 17267939
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatat 303  Q
    ||||||||||||| || || ||| |||||||||| ||| |||| ||||||||||| |  |||||||||||||    
T  17268010 caatgactttgacgtcgtcaacgttgcagatccgtagaaatgagtattccgaagacttgaatatagtcatat 17267939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 303
Target Start/End: Complemental strand, 34416647 - 34416576
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatat 303  Q
    ||||||||||||| || || ||  ||||||||||||||||||| ||||||| |||   ||||||||||||||    
T  34416647 caatgactttgacgtcgtcaacattgcagatccggagacatgagtattccggagacataaatatagtcatat 34416576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 303
Target Start/End: Original strand, 43696105 - 43696176
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatat 303  Q
    ||||||||||| | ||||| ||| |||||||||| |||||||| |||||||||||    |||||||||||||    
T  43696105 caatgactttggcgtcatcaacgttgcagatccgaagacatgagtattccgaagacatgaatatagtcatat 43696176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 242
Target Start/End: Complemental strand, 31262880 - 31262826
Alignment:
Q  188 cggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttg 242  Q
    ||||||||||||||||||||||||| ||| |||| | || ||||||| |||||||    
T  31262880 cggttcagattgtcagatcagcttcaatcgagtgcaaattcaatcaacgactttg 31262826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 149
Target Start/End: Complemental strand, 31269110 - 31269060
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcga 149  Q
    ||||||||| |||||| ||||||| ||| |||||||||| |||||||||||    
T  31269110 gtgatttcgtcgtcttagtgcgacattgttttgttcgtcttctttgtgcga 31269060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 279
Target Start/End: Complemental strand, 40039217 - 40039151
Alignment:
Q  213 gatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattatt 279  Q
    |||| |||| |||| ||||||||||||||  ||||||| ||| |||||||||||| |||||| ||||    
T  40039217 gatcaagtgcagattcaatcaatgacttttgcatcatcaacgttgcagatccggaaacatgactatt 40039151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 313
Target Start/End: Original strand, 4732331 - 4732388
Alignment:
Q  256 tgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcat 313  Q
    ||||||||||||||||||| ||||||| ||| |  ||||||||||||| | |||||||    
T  4732331 tgcagatccggagacatgagtattccggagacttgaatatagtcatatttgtaggcat 4732388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 7640469 - 7640432
Alignment:
Q  1 agggtcaatttttggcacaaaatcacccctctaactcg 38  Q
    |||||||||||||| | |||||||||||||||||||||    
T  7640469 agggtcaatttttgacccaaaatcacccctctaactcg 7640432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 332
Target Start/End: Complemental strand, 13740470 - 13740429
Alignment:
Q  291 aatatagtcatatgtataggcatttgtactttgccgttttat 332  Q
    ||||||||||||| |||||||||  |||||||||||||||||    
T  13740470 aatatagtcatatttataggcataggtactttgccgttttat 13740429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 17084371 - 17084294
Alignment:
Q  196 attgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatg 273  Q
    ||||| ||||||||||| |||||||| ||||| || |||||| |||||| || || ||| |||| ||||| |||||||    
T  17084371 attgttagatcagcttcaatccagtgcagatcaaaacaatgattttgacgtcgtcgacgttgcatatccgtagacatg 17084294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 31262969 - 31262920
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcg 148  Q
    |||||||||||||||| ||||||  ||| |||||| ||||||||||||||    
T  31262969 gtgatttcgccgtcttagtgcgagattgttttgtttgtcgtctttgtgcg 31262920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 281
Target Start/End: Original strand, 38105355 - 38105503
Alignment:
Q  132 ttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaat 231  Q
    ||||||||||| |||||||||| | |||| |||| ||| |   |||||  |||| ||||||||| |||||| | || ||||||| ||||| ||||| ||     
T  38105355 ttcgtcgtcttagtgcgacgtt-gcttgtctttcctgtcttgttcaggcgtttgttcggttcaggttgtcataccatcttcgatacagtgaagatctaaa 38105453  T
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattcc 281  Q
    ||||||||||||  || || | | || ||||||||| |||||| ||||||    
T  38105454 caatgactttgatgtcgtcaaagttgtagatccggatacatgactattcc 38105503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 19581115 - 19581079
Alignment:
Q  2 gggtcaatttttggcacaaaatcacccctctaactcg 38  Q
    ||||||||||||  |||||||||||||||||||||||    
T  19581115 gggtcaatttttaacacaaaatcacccctctaactcg 19581079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 20570230 - 20570274
Alignment:
Q  258 cagatccggagacatgattattccgaagattgaaatatagtcata 302  Q
    ||||||||||||||||| ||||||||||| |  ||||||||||||    
T  20570230 cagatccggagacatgaatattccgaagacttgaatatagtcata 20570274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 303
Target Start/End: Original strand, 32015489 - 32015561
Alignment:
Q  231 tcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatat 303  Q
    |||||||||||| |||| || ||| |||||||| |||||||||| ||||||  ||| |  |||||||||||||    
T  32015489 tcaatgactttggcatcgtcaacgttgcagatctggagacatgaatattccagagactttaatatagtcatat 32015561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 32341818 - 32341774
Alignment:
Q  190 gttcagattgtcagatcagcttcgatccagtgtagatccaatcaa 234  Q
    ||||||||||||||| ||| || |||||||| |||||||||||||    
T  32341818 gttcagattgtcagaccaggtttgatccagtatagatccaatcaa 32341774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 174; Significance: 1e-93; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 99 - 332
Target Start/End: Original strand, 44295415 - 44295647
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  44295415 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgatcagttcagatt 44295513  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||| ||||| |||||||| ||||| |||||||||    
T  44295514 gtcagatcagcttcgatccagtgcagatccaatcaatgactttgacgtcatccacgttgcagatccggatacatggttattccggagatttaaatatagt 44295613  T
Q  299 catatgtataggcatttgtactttgccgttttat 332  Q
    ||||| | |||||| |||||||||||||||||||    
T  44295614 catatatgtaggcaattgtactttgccgttttat 44295647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 8054822 - 8054590
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||    
T  8054822 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtctttcttgtttctctcaggtatttgatcggttcagatt 8054724  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| |||||||||||||||||||| | ||||||||  ||||||||||||||||||  ||||||||||||| |||||||||    
T  8054723 gtcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccac-ttgcagatccggagacatggctattccgaagatttaaatatagt 8054625  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||||||||||| |||||||||||||    
T  8054624 catatgtgtaggcatttgtaccttgccgttttatg 8054590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 37129688 - 37129457
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| |||||||||||||| |||||||||||||||||||| || ||||||||||||||||||| |||||||||||| || ||||||||    
T  37129688 gtgatttcgtcgtctt-gtgcgacgttggtt-gttcgtcgtctttgtgcgacatt-gtttgtttttcttgtttctctcaggtatttgaacgcttcagatt 37129592  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||||||||||||||| |||| |||||||||||||||||||| | ||||||||| |||||||||||| ||||| |||||||||||||| |||||||||    
T  37129591 gtcagatcagcttcgatcaagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggaaacatggttattccgaagatttaaatatagt 37129492  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||||||||||||||| |||||||||    
T  37129491 catatgtgtaggcatttgtactttgacgttttatg 37129457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 41996644 - 41996875
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||   ||| ||||||| |||| ||||||||||||||||||||||||    
T  41996644 gtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttt---tgtctttcttgattctctcaggtatttgatcggttcagatt 41996740  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||| ||||| |||||||||||||||||||| | ||||||||| |||||||||||||||||   ||||||| ||||| |||||||||    
T  41996741 gtcagatcagcttcgattcagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggagacatagctattccggagatttaaatatagt 41996840  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||||||||||| ||| |||||||||    
T  41996841 catatgtgtaggcatttgtaccttgtcgttttatg 41996875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 5457170 - 5457403
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||| |||||||||||| |||||||||| |||||| |||||||||||| ||| ||||||||||||||||||||    
T  5457170 gtgatttcgtcgtcttcgtgcgacgttggttagttcgtcgtcttcgtgcgacgtt-gtttgtctttcttgtttctctcaagtatttgatcggttcagatt 5457268  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||||||||||||||| |||| ||||||||||||| |||||| | ||||||||| ||||||||||||||||||  ||||||| ||||| |||||||||    
T  5457269 gtcagatcagcttcgatctagtgcagatccaatcaataactttgccgtcatccacgttgcagatccggagacatggctattccggagatttaaatatagt 5457368  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||| ||||||||| ||| |||||||||    
T  5457369 catatgtgtagccatttgtaccttgtcgttttatg 5457403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 9270120 - 9270353
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  9270120 gtgatttcgttgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgatcggttcagatt 9270218  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||| |||||||||||||||||| |||||||||| ||| ||| | |  |||| | | |||||||| ||||||||| |||||| ||||||| |||||||||    
T  9270219 gtcatatcagcttcgatccagtgcagatccaatcgatggcttcggcggcatctatggtgcagatctggagacatggttattctgaagatttaaatatagt 9270318  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||||||||||||||||| |||||||    
T  9270319 catatgtgtaggcatttgtactttgccattttatg 9270353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 99 - 331
Target Start/End: Original strand, 32412889 - 32413120
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||| ||||||||||||| ||||||||||    
T  32412889 gtgatttcgtcgtcttcgtgcgacgttggtttgttcatcgtctttgtgcgatgtt-gtttgtttttcttgtttctttcaggtatttgattggttcagatt 32412987  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||| ||| |||||||||||||||||||| | ||||| ||| |  ||||||||| |||||||||||||||||||| | |||||||    
T  32412988 gtcagatcagcttcgatcctgtgcagatccaatcaatgactttggcgtcatctacgttatagatccggatacatgattattccgaagatttagatatagt 32413087  T
Q  299 catatgtataggcatttgtactttgccgtttta 331  Q
    |||| || ||| ||||||||||||| |||||||    
T  32413088 catacgtgtagacatttgtactttgtcgtttta 32413120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 32104853 - 32104619
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||| ||||||||||||||| ||| ||||||||| ||||| |||||| |||||||||||| ||||||||||||||||||||||||    
T  32104853 gtgatttcgtcgtcttcgtacgacgttggtttgtttgtcatctttgtgcaacgtt-gtttgtctttcttgtttctctcaggtatttgatcggttcagatt 32104755  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttga-catcatccacgctgcagatccggagacatgattattccgaagattgaaatatag 297  Q
    |||||||||| |||||||||||| |||| |||||||| ||||||| | ||||||||| ||||||||||||||||||  ||||||| ||||| ||||||||    
T  32104754 gtcagatcagtttcgatccagtgcagattcaatcaataactttgaccgtcatccacgttgcagatccggagacatggctattccggagatttaaatatag 32104655  T
Q  298 tcatatgtataggcatttgtactttgccgttttatg 333  Q
    |||||||| || |||||||||| |||||||||||||    
T  32104654 tcatatgtgtatgcatttgtaccttgccgttttatg 32104619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 9992766 - 9992998
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||| | || ||||||||||||||| |||    
T  9992766 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgtgacatt-gtttgtttttcttgtttctcttagatatttgatcggttcaaatt 9992864  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||| |||||| ||||| || |||||||||||| ||||||| | ||||||||| ||||||||| |||||||| |||||||| ||||| |||||||||    
T  9992865 gtcagataagcttcaatccaatgcagatccaatcaacgactttggcgtcatccacgttgcagatcc-gagacatggttattccggagatttaaatatagt 9992963  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||||||||||||||||| ||||||||    
T  9992964 catatgtgtaggcatttgtactttgctgttttatg 9992998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 16996903 - 16996671
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||| ||||||||    
T  16996903 gtgatttcgtcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgtt-gtttgtttttcctgtttctctcaggtatttgatcgcttcagatt 16996806  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||| || |||||||||||||| |||||||||||||||||||| | ||||||||| |||| ||| | | ||||| |||||||| | ||| |||||||||    
T  16996805 gtcagttcggcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcaaatctgaaaacatggttattccggatatttaaatatagt 16996706  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||| | |||||||||||||||||||||||||||    
T  16996705 catatatgtaggcatttgtactttgccgttttatg 16996671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 99 - 305
Target Start/End: Complemental strand, 14115843 - 14115638
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| | |||||||| ||||||||||||||||| |||||| |||||  || ||||||||||||||||||| ||||||||||||||||||||||||    
T  14115843 gtgatttcgtcatcttcgtgtgacgttggtttgttcgttgtctttttgcgaaatt-gtttgtttttcttgtttctctcaggtatttgatcggttcagatt 14115745  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| |||||||||||||||||||| | ||||||||| |||||||| | ||||||  |||||| |  |||| |||||||||    
T  14115744 gtcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatctgaagacattgttattcaggcgatttaaatatagt 14115645  T
Q  299 catatgt 305  Q
     ||||||    
T  14115644 tatatgt 14115638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 36545796 - 36545563
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | |||||| |||||||||||||||||| |||||||||||||||||||  | |||||||||  ||||| ||||||||||||||| ||||| ||    
T  36545796 gtgattttgtcgtctttgtgcgacgttggtttgttagtcgtctttgtgcgacgttc-tatgtttttctattttctctcaggtatttgatcgattcaggtt 36545698  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||| ||||| ||||||||| | | |||||||||||||||| |  |||||||| ||||||||| |||||||| || |||||  |||| |||||||||    
T  36545697 gtcagattagctttgatccagtgcaaacccaatcaatgactttggctccatccacgttgcagatccagagacatggttgttccggtgatttaaatatagt 36545598  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| || ||| |||||||||| |||||||||    
T  36545597 catatgtgtaagcaattgtactttgtcgttttatg 36545563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 31874183 - 31874412
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | |||||| |||| |||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||    
T  31874183 gtgattttgtcgtctttgtgcaacgttggtttgttcgtcgtctttgtgcgacatt-gtttgtttttcttgtttctctcaggtatttgatcggttcagatt 31874281  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||| || ||||||||||||| ||||    || | |  |||| | ||||||||| ||||||||| |||||||| || ||||| ||||| |||||||||    
T  31874282 gtcagaacatcttcgatccagtgcagat--tgtc-aggtatttgccgtcatccacgttgcagatcc-gagacatggtttttccggagatttaaatatagt 31874377  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||||| |||||||||| |||||||||    
T  31874378 catatgtgtaggcaattgtactttgtcgttttatg 31874412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 141 - 332
Target Start/End: Original strand, 5328095 - 5328280
Alignment:
Q  141 tttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactt 240  Q
    ||||||||||||| ||||||||||||||| |||  || ||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||    
T  5328095 tttgtgcgacgtt-gtttgtttttcttgtctct--caagtatttgatcggttcagattgtcagatcagctttgatctagtgcagatccaatcaatgactt 5328191  T
Q  241 tgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttat 332  Q
    ||    | |||||| |||||||||||| ||||| |||||||| ||||| ||||||||| |||||| || |||||||||||||||||||||||    
T  5328192 tg---gcgtccacgttgcagatccggatacatggttattccggagatttaaatatagttatatgtgtatgcatttgtactttgccgttttat 5328280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 32256736 - 32256503
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    |||||||||||||||| |||||| |||| |||||| ||||||||||||||||||| |||||| ||||||||||   || |||||||| |||||| |||||    
T  32256736 gtgatttcgccgtcttagtgcgatgttgttttgtttgtcgtctttgtgcgacgtt-gtttgtctttcttgttttgttcgggtatttgttcggtttagatt 32256638  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    || | |||||||||||||  ||| ||||| ||||||||||||||   ||||| ||| |||||||||||||||| |  ||||||| ||| | |||||||||    
T  32256637 gttaaatcagcttcgatcatgtgcagatcaaatcaatgactttggagtcatcaacgttgcagatccggagacaagggtattccggagacttaaatatagt 32256538  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| | ||| || ||||||||||||||||||    
T  32256537 catatgtgtcggctttagtactttgccgttttatg 32256503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 3925705 - 3925472
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| |||| || ||| ||| ||||||||||||||||||| || |||||  |||||||||||  ||||||||||| ||| |||||||     
T  3925705 gtgatttcgtcgtcttagtgcaaccttgtttttttcgtcgtctttgtgcgacctt-gtttgcctttcttgtttcattcaggtatttgttcgattcagata 3925607  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||||||||||||||| |||| ||||| ||||||||||||||   || || ||| |||||||  |||||||||| ||||||| ||| | ||||||| |    
T  3925606 gtcagatcagcttcgatcaagtgcagatcaaatcaatgactttggagtcgtcaacgttgcagatttggagacatgagtattccggagacttaaatataat 3925507  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||| || ||||||||||||||||||    
T  3925506 catatgtgtaggctttagtactttgccgttttatg 3925472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 109 - 333
Target Start/End: Complemental strand, 31713081 - 31712858
Alignment:
Q  109 cgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcag 208  Q
    |||||| |||||| |||| |||||||||||||||||||||||||| |||||| ||||||| |||  | ||||||||| |||||||||||||||| |||||    
T  31713081 cgtctttgtgcgatgttgttttgttcgtcgtctttgtgcgacgtt-gtttgtctttcttgcttcgtttaggtatttgttcggttcagattgtcatatcag 31712983  T
Q  209 cttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtata 308  Q
    ||||||||||||| ||||| ||||||||||||||   ||||| | | |||||||  |||||||| | |||||||  || | |||||||||||||||| ||    
T  31712982 cttcgatccagtgcagatcaaatcaatgactttggactcatcaatgttgcagatatggagacatcagtattccggtgacttaaatatagtcatatgtgta 31712883  T
Q  309 ggcatttgtactttgccgttttatg 333  Q
    ||| || ||||||  ||||||||||    
T  31712882 ggctttagtacttgaccgttttatg 31712858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 16937354 - 16937121
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| ||||||| ||| ||||||| ||||||||||||||| || |||||  |||| ||||||  ||||||||||| |  |||||||||    
T  16937354 gtgatttcgtcgtcttagtgcgaccttgttttgttcatcgtctttgtgcgacatt-gtttgcctttcgtgtttcgttcaggtatttgtttagttcagatt 16937256  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||   || || ||| ||||||||  ||||||||  ||||||| ||| | |||||||||    
T  16937255 gtcagatcagcttcgatccagtgcatatcaaatcaatgactttggagtcgtcaacgttgcagatctagagacatgggtattccggagacttaaatatagt 16937156  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||| || ||||||||  ||||||||    
T  16937155 catatgtgtaggctttagtactttgttgttttatg 16937121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 100 - 333
Target Start/End: Original strand, 10042872 - 10043103
Alignment:
Q  100 tgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattg 199  Q
    |||||||| |||||| |||| |||||| ||||||||| ||||| ||||||||||  ||||| |||||||||||  ||||||||||| || ||||| ||||    
T  10042872 tgatttcgtcgtcttagtgcaacgttgttttgttcgttgtcttagtgcgacgtta-tttgtctttcttgtttcgttcaggtatttgttcagttcaaattg 10042970  T
Q  200 tcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtc 299  Q
    ||||||||||||||||| |||| ||||| ||||||| ||||||   || || ||| ||||||||||||||||||  ||||||| ||| | |||||||||     
T  10042971 tcagatcagcttcgatctagtgcagatcaaatcaataactttggagtcgtcaacgttgcagatccggagacatgtgtattccggagacttaaatatagtt 10043070  T
Q  300 atatgtataggcatttgtactttgccgttttatg 333  Q
    |||||| || || || |||||||| |||||||||    
T  10043071 atatgtgta-gctttagtactttgtcgttttatg 10043103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 12248729 - 12248493
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| ||||||| ||| |||||||||||||||||||||||| |||||||| |||||||||||  ||||||||||| ||| ||||||||    
T  12248729 gtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcgacg-ttgtttgtctttcttgtttcattcaggtatttgttcgattcagatt 12248631  T
Q  199 gtca---gatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatat 295  Q
     |||   ||||| |||||| |||||| ||||| ||||||||||||||   || || ||  ||||||| | ||||||||  ||||||  ||| | ||||||    
T  12248630 atcagatgatcaacttcgaaccagtgcagatcaaatcaatgactttggagtcgtcaactttgcagattcagagacatgggtattccagagacttaaatat 12248531  T
Q  296 agtcatatgtataggcatttgtactttgccgttttatg 333  Q
    |||||||||| ||||| || ||| ||||||||||||||    
T  12248530 agtcatatgtgtaggctttagtattttgccgttttatg 12248493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 99 - 243
Target Start/End: Original strand, 37659065 - 37659208
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    |||||||||  ||||| ||||||| ||| |||||||||||||||||| ||||||| |||||  |||||||||||  ||| ||||||| ||||||||||||    
T  37659065 gtgatttcgttgtcttagtgcgaccttgttttgttcgtcgtctttgtacgacgtt-gtttgcctttcttgtttcgttcaagtatttgttcggttcagatt 37659163  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttga 243  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||    
T  37659164 gtcagatcagcttcgatccagtgcagatcaaatcaatgactttga 37659208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 32061893 - 32062126
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgt-ttttcttgtttctatcaggtatttgatcggttcagat 197  Q
    ||||||||| |||||| |||||||| || |||||| |||||||||||||||| || |||||| |||||    || | |||||| |||| |||||||||||    
T  32061893 gtgatttcgtcgtcttagtgcgacgctgttttgtttgtcgtctttgtgcgacatt-gtttgtcttttccctcttgt-tcaggtgtttgttcggttcagat 32061990  T
Q  198 tgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatag 297  Q
    ||||||||||||||||||| |||| |||||||| ||||||||||| | ||||| ||| ||||||||||||| ||||  |||||| ||||||  |||||||    
T  32061991 tgtcagatcagcttcgatcaagtgcagatccaaccaatgactttggcgtcatcaacgttgcagatccggaggcatggctattccaaagattttaatatag 32062090  T
Q  298 tcatatgtataggcatttgtactttgccgttttatg 333  Q
    |||||| | || || | || |||||| |||||||||    
T  32062091 tcatatttgtatgcttatgcactttgtcgttttatg 32062126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 12244231 - 12243998
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| | |||| ||||||||||| ||||||||||  ||||||||| |||| ||||||  || |||||||  ||||||||||| ||| ||||||||    
T  12244231 gtgatttcgtcatcttagtgcgacgttgttttgttcgtcaactttgtgcggcgtt-gtttgtcgtttttgtttcgttcaggtatttgttcgattcagatt 12244133  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||| |||||||| |||||| || |||||||||||||||||||||  || || | | ||||| |||||||| |||  ||||||  ||| |  ||||||||    
T  12244132 gtcatatcagctttgatccaatgcagatccaatcaatgactttgatgtcgtcaatgttgcagttccggagatatgggtattccagagacttgaatatagt 12244033  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
     |||||| ||||| ||||||||||| |||||||||    
T  12244032 tatatgtgtaggcttttgtactttgtcgttttatg 12243998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 100 - 241
Target Start/End: Original strand, 26937625 - 26937765
Alignment:
Q  100 tgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattg 199  Q
    |||||| | |||||| ||||| ||||||||||||||||| ||||||||| |||| |||||| |||||||||||  ||||||||||  |||||||||||||    
T  26937625 tgattttgtcgtcttagtgcgtcgttggtttgttcgtcgactttgtgcggcgtt-gtttgtctttcttgtttcgttcaggtatttattcggttcagattg 26937723  T
Q  200 tcagatcagcttcgatccagtgtagatccaatcaatgacttt 241  Q
    |||||||||||| |||| |||| | |||||||||||||||||    
T  26937724 tcagatcagctttgatctagtgcaaatccaatcaatgacttt 26937765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 153 - 328
Target Start/End: Original strand, 13977560 - 13977735
Alignment:
Q  153 ttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatcca 252  Q
    |||||||| |||||||||||  |||||||||||| ||||||||||| |||||||| ||||||| ||||| | || ||||||| |||||||||||| || |    
T  13977560 ttgtttgtctttcttgtttcgttcaggtatttgaccggttcagattatcagatcaacttcgattcagtgcaaattcaatcaacgactttgacatcgtcaa 13977659  T
Q  253 cgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtt 328  Q
    || |||||||||||||| |||| ||||| | ||| |  |||||| ||||||||  |||| ||||||| ||||||||    
T  13977660 cgttgcagatccggagatatgagtattctggagacttgaatataatcatatgtgcaggcttttgtaccttgccgtt 13977735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 128 - 333
Target Start/End: Original strand, 23766867 - 23767071
Alignment:
Q  128 tttgttcgtcgtctttgtgcgacgtttgtttgt-ttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagat 226  Q
    |||||||||||||||||||||||||| |||||| |||| ||| |||  ||| ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  23766867 tttgttcgtcgtctttgtgcgacgtt-gtttgtatttttttggttcattcatgtatttgttcgattcagattgtcagatcagcttcgatccagtgtagat 23766965  T
Q  227 ccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccg 326  Q
      ||||||||||||||   || || ||| |||||||||||| |||||  || |||| ||    |||||||||||||||| ||||| ||  |||| |||||    
T  23766966 taaatcaatgactttggagtcgtcaacgttgcagatccggaaacatgggta-tccggaggcataaatatagtcatatgtgtaggctttaatactctgccg 23767064  T
Q  327 ttttatg 333  Q
    |||||||    
T  23767065 ttttatg 23767071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 99 - 332
Target Start/End: Original strand, 2629011 - 2629241
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||| || ||||||||||  ||||| |||| |||||||||||| || |||||| |||||||||||  ||||| ||||| | ||| ||||||    
T  2629011 gtgatttcgtcgttttagtgcgacgttattttgtccgtcatctttgtgcgacatt-gtttgtctttcttgtttcgttcaggcatttgtttggt-cagatt 2629108  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||   || || |   || |||| ||||||||||  ||||||| ||| | |||||||||    
T  2629109 gtcagatcagcttcgatccagtgcagatcaaatcaatgactttggagtcctcaatattgtagat-cggagacatgtgtattccggagacttaaatatagt 2629207  T
Q  299 catatgtataggcatttgtactttgccgttttat 332  Q
    ||||||| ||||  || |||||||| ||||||||    
T  2629208 catatgtgtaggatttagtactttgtcgttttat 2629241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 103 - 333
Target Start/End: Complemental strand, 27534423 - 27534194
Alignment:
Q  103 tttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtt-tgtttt---tcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||| |||||| ||||||| ||| |||||| |||||||||||||| ||||  || ||||||   ||||||||     |||| |||| || | |||||||    
T  27534423 tttcgtcgtcttagtgcgacattgttttgtttgtcgtctttgtgcggcgttgtttgtgttttccctcttgttt-----aggtgtttgttcagatcagatt 27534329  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||| ||||||||||||||| |||||||| ||||||||| | | ||||| ||| |||| ||||||| || ||| ||||||| |||||  ||||||||    
T  27534328 gtcagattagcttcgatccagtgcagatccaaccaatgacttaggcgtcatcaacgttgcatatccggaaacgtgactattccgtagattttaatatagt 27534229  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||| | ||||| | |||||||||||||||||||    
T  27534228 catatttgtaggcttatgtactttgccgttttatg 27534194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 154 - 333
Target Start/End: Original strand, 37719993 - 37720172
Alignment:
Q  154 tgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccac 253  Q
    ||||||| |||||||||||  || |||||||| |||||| ||| | ||||| || ||||||||||||| ||||| |||||| ||||||| | ||||| ||    
T  37719993 tgtttgtctttcttgtttcgttcgggtatttgttcggtttagaatatcagaccaacttcgatccagtgcagatctaatcaaagactttggcttcatcaac 37720092  T
Q  254 gctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    | ||||||||| |||||||   ||||||| ||| |  ||||||||||||||| ||||| ||||||||||| |||||||||    
T  37720093 gttgcagatccagagacataggtattccgtagacttgaatatagtcatatgtgtaggcttttgtactttgtcgttttatg 37720172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 100 - 273
Target Start/End: Original strand, 15665639 - 15665811
Alignment:
Q  100 tgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattg 199  Q
    |||||||| |||||| ||| || ||||  ||||| |||||||||||||  |||| |||||| | || |||||   ||||||||||| |||||||||||||    
T  15665639 tgatttcgtcgtcttagtgagatgttgtgttgtttgtcgtctttgtgcagcgtt-gtttgtctatcctgttttgttcaggtatttgttcggttcagattg 15665737  T
Q  200 tcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatg 273  Q
    |||| ||||||| ||||||||| ||||||||||||||||||||   |||||  || ||||||||||||||||||    
T  15665738 tcaggtcagcttagatccagtgcagatccaatcaatgactttggtgtcatcagcgttgcagatccggagacatg 15665811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 241
Target Start/End: Original strand, 5989729 - 5989870
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | ||| || ||||||||||||| ||||||||||||||||||| |||| |||||| |||||| ||||  ||| ||||||  ||||||||||||    
T  5989729 gtgattttgtcgttttagtgcgacgttggtatgttcgtcgtctttgtgcggcgtt-gtttgtctttcttatttcgctcaagtatttcttcggttcagatt 5989827  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgacttt 241  Q
    ||||| ||| ||||||| ||||| |||| ||||||||||||||    
T  5989828 gtcaggtcaacttcgattcagtgcagattcaatcaatgacttt 5989870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 99 - 242
Target Start/End: Complemental strand, 5917757 - 5917622
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| |||||||||||  ||||||||||||||||||||||| |||||||| |||| | |||   ||||||||||| ||||||||||||    
T  5917757 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtctttgtgcgacg-ttgtttgtctttcctattttgttcaggtatttgttcggttcagatt 5917659  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttg 242  Q
    |||||||       ||||||||| ||||||||||||||||||||    
T  5917658 gtcagat-------gatccagtgcagatccaatcaatgactttg 5917622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 99 - 303
Target Start/End: Complemental strand, 7281142 - 7280941
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    |||||||||||||| | ||||||| |||||||||||||||||||||||| ||  |||||||| ||  |||||||   |||||||||| |||||| |||||    
T  7281142 gtgatttcgccgtcatagtgcgacattggtttgttcgtcgtctttgtgcaac-attgtttgtcttatttgtttcatgcaggtatttgttcggtttagatt 7281044  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||| ||| ||||||| |||||| |||| ||||| ||||||||| | || |||||| ||||||||  ||||||||  ||||||| | | |  ||||||||    
T  7281043 gtcatatccgcttcga-ccagtgcagattcaatctatgactttg-cgtcgtccacgttgcagatctagagacatgggtattccggatacttgaatatagt 7280946  T
Q  299 catat 303  Q
    |||||    
T  7280945 catat 7280941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 288
Target Start/End: Complemental strand, 11298758 - 11298587
Alignment:
Q  116 gtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgt-ttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcga 214  Q
    ||||||||||| |||||| |||||||||||||| |||| |||||| |||||    || | |||||| |||| |||| |||||||||||||| ||||| ||    
T  11298758 gtgcgacgttgttttgtttgtcgtctttgtgcggcgtt-gtttgtcttttccctcttgt-tcaggtgtttgttcggatcagattgtcagattagctttga 11298661  T
Q  215 tccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagatt 288  Q
    ||||||| |||||||| ||||||||||| | ||||  ||| |||| ||||||||||||| |||||| |||||||    
T  11298660 tccagtgcagatccaaccaatgactttggcgtcataaacgttgcatatccggagacatggttattctgaagatt 11298587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 222 - 333
Target Start/End: Complemental strand, 14530809 - 14530698
Alignment:
Q  222 tagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactt 321  Q
    ||||||||| ||||||||||| |  |||| ||| ||||||||||||| ||||| ||||||| |||||  ||||||||||||| ||||||| | |||||||    
T  14530809 tagatccaaccaatgactttggcggcatcaacgttgcagatccggaggcatgactattccggagattttaatatagtcatatttataggcttgtgtactt 14530710  T
Q  322 tgccgttttatg 333  Q
    ||||||||||||    
T  14530709 tgccgttttatg 14530698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 252
Target Start/End: Original strand, 17019217 - 17019369
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatc-aggtatttgatcggttcagat 197  Q
    ||||||| | |||||| |||||||||||||||||||||||||||||||| |   |||||||| ||||||||||| ||| | ||||||| |||| ||||||    
T  17019217 gtgatttggtcgtcttagtgcgacgttggtttgttcgtcgtctttgtgc-attgttgtttgtctttcttgtttc-atctaagtatttgttcggatcagat 17019314  T
Q  198 tgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatcca 252  Q
    | |||||| | ||| |||||| || ||||||||||||||| |||| |||| ||||    
T  17019315 tttcagattaactttgatccaatgcagatccaatcaatgattttggcatcgtcca 17019369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 252
Target Start/End: Original strand, 17549654 - 17549806
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatc-aggtatttgatcggttcagat 197  Q
    ||||||| | |||||| |||||||||||||||||||||||||||||||| |   |||||||| ||||||||||| ||| | ||||||| |||| ||||||    
T  17549654 gtgatttggtcgtcttagtgcgacgttggtttgttcgtcgtctttgtgc-attgttgtttgtctttcttgtttc-atctaagtatttgttcggatcagat 17549751  T
Q  198 tgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatcca 252  Q
    | |||||| | ||| |||||| || ||||||||||||||| |||| |||| ||||    
T  17549752 tttcagattaactttgatccaatgcagatccaatcaatgattttggcatcgtcca 17549806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 191 - 333
Target Start/End: Complemental strand, 18190770 - 18190633
Alignment:
Q  191 ttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattga 290  Q
    |||||||||||| |||||||||||||||||| |||||||| ||||||||||| | ||||     ||||||||| |||| ||||  ||||||||| |||      
T  18190770 ttcagattgtcaaatcagcttcgatccagtgcagatccaaccaatgactttggcgtcat-----ctgcagatctggaggcatggctattccgaaaatttt 18190676  T
Q  291 aatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||||||||| | ||||| | ||||||||| |||||||||    
T  18190675 aatatagtcatatttgtaggcttgtgtactttgtcgttttatg 18190633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 335
Target Start/End: Complemental strand, 7269479 - 7269246
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | |||| | |||||||||||||||||| ||||||||||||| ||  |||||||| |||||||||||   || ||||||| |||||| |||||    
T  7269479 gtgattttgtcgtcatagtgcgacgttggtttgttagtcgtctttgtgcaac-attgtttgtctttcttgtttcatgcaagtatttgttcggtttagatt 7269381  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||| ||| ||||||| | |||| |||| || || ||||||||| | || |||| | ||||||||||||||||||  ||||||| | | |  ||||||||    
T  7269380 gtcatatctgcttcga-ctagtgcagattcattctatgactttg-cgtcgtccatgttgcagatccggagacatgggtattccggatacttgaatatagt 7269283  T
Q  299 catatgtataggcatttgtactttgccgttttatgat 335  Q
     | |||  ||||  |||||||||||  ||||||||||    
T  7269282 tacatgagtaggtttttgtactttgttgttttatgat 7269246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 1215354 - 1215123
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| ||| ||||||| |||||| ||| ||||||||||||||| |||| | ||| ||  || | ||||||  ||| ||| ||||||||    
T  1215354 gtgatttcgtcgtcttagtgtgacgttgttttgtttgtcatctttgtgcgacgtt-gtttatcttt-ttccttgt-tcaggtggttgttcgattcagatt 1215258  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||| |||||||| |||| |||| |||||||| ||||||||||| | ||||| ||| ||||||||| ||| || || ||||||  |||||  ||| ||||    
T  1215257 gtcaaatcagctttgatctagtgcagatccaaccaatgactttggcctcatcaacgttgcagatcccgaggcaggactattccagagattttaatgtagt 1215158  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
     | || | ||||| | ||||||||| |||||||||    
T  1215157 tacatatgtaggcttatgtactttgtcgttttatg 1215123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 227
Target Start/End: Original strand, 14327578 - 14327705
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgt-ttttcttgtttctatcaggtatttgatcggttcagat 197  Q
    ||||||| | |||||| ||||||||||| |||||| ||||||||||||||||| |||||||| |||||   ||| | ||| || |||| |||||||||||    
T  14327578 gtgatttagtcgtcttagtgcgacgttgttttgtttgtcgtctttgtgcgacg-ttgtttgtcttttcccttttgt-tcaagtgtttgttcggttcagat 14327675  T
Q  198 tgtcagatcagcttcgatccagtgtagatc 227  Q
    |||||||||||||||||| ||||| |||||    
T  14327676 tgtcagatcagcttcgatacagtgcagatc 14327705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 333
Target Start/End: Complemental strand, 18197051 - 18196928
Alignment:
Q  210 ttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtatag 309  Q
    ||||||| |||| |||||||| ||||||||||||| || || ||| |||||||||||||||||   |||||| |||| |  ||||||||||||| | |||    
T  18197051 ttcgatctagtgcagatccaaccaatgactttgacgtcgtcaacgttgcagatccggagacatcgctattccaaagactttaatatagtcatatttgtag 18196952  T
Q  310 gcatttgtactttgccgttttatg 333  Q
     | | |||||||||||||||||||    
T  18196951 tcttctgtactttgccgttttatg 18196928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 280
Target Start/End: Complemental strand, 26582903 - 26582727
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    |||||||||  ||||| |||||| |||||||| ||||||| ||||||||   ||| ||||||||| ||||||||  || | |||||| ||| ||||||||    
T  26582903 gtgatttcgttgtcttagtgcgatgttggtttattcgtcgactttgtgcattgtt-gtttgtttt-cttgtttcgttcggatatttgttcgattcagatt 26582806  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattc 280  Q
    |||||||||||||| |||   || | ||| ||||||| |||||  ||| ||||||| |||||||||||| |||||| |||||    
T  26582805 gtcagatcagcttcaatc---tgcatatctaatcaattactttagcatgatccacgttgcagatccggatacatgagtattc 26582727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 232 - 333
Target Start/End: Complemental strand, 10338714 - 10338613
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    ||||||||||| | || || ||| ||||||||||||||||||| ||||||| |||   |||||||||||||| | |||||||  ||||||||||||||||    
T  10338714 caatgactttggcgtcgtcaacgttgcagatccggagacatgagtattccggagacaaaaatatagtcatatttgtaggcataggtactttgccgtttta 10338615  T
Q  332 tg 333  Q
    ||    
T  10338614 tg 10338613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 116 - 242
Target Start/End: Original strand, 13864475 - 13864600
Alignment:
Q  116 gtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctat-caggtatttgatcggttcagattgtcagatcagcttcga 214  Q
    ||||||||||| ||||||| |  ||||| |||| |||| |||||| |||||||||| ||| |||||||||  || |||||||||||||||||||||||||    
T  13864475 gtgcgacgttgttttgttctttatctttctgcggcgtt-gtttgtctttcttgttt-tatgcaggtatttcttcagttcagattgtcagatcagcttcga 13864572  T
Q  215 tccagtgtagatccaatcaatgactttg 242  Q
    | ||||| | || ||||| |||||||||    
T  13864573 tacagtgcatattcaatccatgactttg 13864600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 100 - 333
Target Start/End: Complemental strand, 16938285 - 16938054
Alignment:
Q  100 tgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattg 199  Q
    |||||||| |||||| ||||||| ||| | |||||||||| |||||||  |||| |||||| ||| || |||   || |||||||| ||||||||| |||    
T  16938285 tgatttcgtcgtcttagtgcgactttgttgtgttcgtcgtatttgtgctgcgtt-gtttgtcttttttatttagttcgggtatttgttcggttcaggttg 16938187  T
Q  200 tcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatat---- 295  Q
     |||||||||||      |||| |||| ||||||||||||||    || || ||| |||||||||||||| |||  ||||||||||| | ||||||        
T  16938186 ccagatcagctt------agtgcagattcaatcaatgacttttgtgtcgtcaacgttgcagatccggagatatgggtattccgaagacttaaatatagtc 16938093  T
Q  296 -agtcatatgtataggcatttgtactttgccgttttatg 333  Q
     |||||||||| ||||| |||||||||||  ||||||||    
T  16938092 aagtcatatgtgtaggcttttgtactttgttgttttatg 16938054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 99 - 208
Target Start/End: Original strand, 3681022 - 3681130
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | ||| || ||||||| ||| ||| |||||||||||  ||||||||| |||||| |||||||||||| || |||||||| |||||| |||||    
T  3681022 gtgattttgtcgttttagtgcgacattgatttattcgtcgtcttcatgcgacgtt-gtttgtctttcttgtttctttctggtatttgttcggtttagatt 3681120  T
Q  199 gtcagatcag 208  Q
    |||| |||||    
T  3681121 gtcatatcag 3681130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 228 - 333
Target Start/End: Original strand, 16809090 - 16809195
Alignment:
Q  228 caatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgt 327  Q
    ||||||||||||||||| |  |||||| ||||||||| || |||||| ||||||| ||| |  ||||||||||||||| ||||| | |||||||||  ||    
T  16809090 caatcaatgactttgacgttgtccacgttgcagatccagaaacatgagtattccggagacttgaatatagtcatatgtgtaggcttctgtactttgttgt 16809189  T
Q  328 tttatg 333  Q
    ||||||    
T  16809190 tttatg 16809195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 166 - 333
Target Start/End: Complemental strand, 31147780 - 31147609
Alignment:
Q  166 ttgtttctatcaggtatttgatcggttcagattgtca---gatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcag-a 261  Q
    |||||||  ||||||||||| ||||||||| ||||||   ||||| |||  ||||| || |||||||||||||||||||||| || |||||| ||||| |    
T  31147780 ttgtttcattcaggtatttgttcggttcagtttgtcatgtgatcaactttaatccaatgcagatccaatcaatgactttgacgtcgtccacgttgcagaa 31147681  T
Q  262 tccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||| ||||||||| |||| || ||| |  ||||||  ||||| | ||||| ||| ||||||| | |||||||    
T  31147680 tccagagacatgagtatttcggagacttgaatataaccatatatgtaggcttttatactttgtcattttatg 31147609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 333
Target Start/End: Original strand, 10148206 - 10148283
Alignment:
Q  256 tgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||||||||||||||| |||| || ||| | |||||||||||||| | |||||||  |||||||| |||||||||    
T  10148206 tgcagatccggagacatgagtatttcggagacttaaatatagtcatatttgtaggcataagtactttgtcgttttatg 10148283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 263
Target Start/End: Original strand, 18994075 - 18994151
Alignment:
Q  187 tcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatc 263  Q
    ||||||||||||||||||||||||| ||||  ||| |||| |||| ||||| |||| |||| |||||| ||||||||    
T  18994075 tcggttcagattgtcagatcagctttgatctggtgaagattcaataaatgattttggcatcgtccacgttgcagatc 18994151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 268
Target Start/End: Original strand, 32920843 - 32920911
Alignment:
Q  200 tcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggag 268  Q
    |||||| | |||||||||||||| ||||||||||||||||||| | ||||| ||| |||||||| ||||    
T  32920843 tcagattaacttcgatccagtgtggatccaatcaatgactttggcgtcatcaacgttgcagatctggag 32920911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 303
Target Start/End: Complemental strand, 2025092 - 2025045
Alignment:
Q  256 tgcagatccggagacatgattattccgaagattgaaatatagtcatat 303  Q
    ||||||||||||||||||||||||||| ||| | ||||||||||||||    
T  2025092 tgcagatccggagacatgattattccggagacttaaatatagtcatat 2025045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 313
Target Start/End: Complemental strand, 7256706 - 7256613
Alignment:
Q  218 agtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcat 313  Q
    ||||||||||||||||||||||||  |||| || ||  || |||||| ||||||||| |||||| |||| | |||||||||||||||| |||||||    
T  7256706 agtgtagatccaatcaatgacttttgcatcgtcaac-ttgaagatcc-gagacatgagtattccaaagacttaaatatagtcatatgtgtaggcat 7256613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 10334398 - 10334457
Alignment:
Q  223 agatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccg 282  Q
    |||||| ||||||||||||| |||| || ||| ||||||||||||||||||| |||||||    
T  10334398 agatccgatcaatgactttggcatcgtcaacgttgcagatccggagacatgagtattccg 10334457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 303
Target Start/End: Complemental strand, 30026774 - 30026703
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatat 303  Q
    ||||||||||| |||| || ||| ||||||||||||||||||| ||||||| ||| |  |||||||||||||    
T  30026774 caatgactttggcatcttcaacgttgcagatccggagacatgaatattccggagacttgaatatagtcatat 30026703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 305
Target Start/End: Complemental strand, 14919313 - 14919200
Alignment:
Q  191 ttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattga 290  Q
    ||||||||||||||||| ||| ||||||||| | || |||| |||||||||| |||| || ||| || | | |||||||||| | ||||| || ||||      
T  14919313 ttcagattgtcagatcaactttgatccagtgcaaattcaattaatgactttggcatcgtcaacgttgaaaacccggagacat-agtattctgatgatttg 14919215  T
Q  291 aatatagtcatatgt 305  Q
    |||||||||||||||    
T  14919214 aatatagtcatatgt 14919200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 303
Target Start/End: Original strand, 12356985 - 12357097
Alignment:
Q  191 ttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattga 290  Q
    |||| ||||| ||||||||||||||||| || | || ||| |||| ||||||  |||||| ||| |||||||| |||  ||||| ||||||| ||| |      
T  12356985 ttcaaattgttagatcagcttcgatccattgcaaattcaaccaataactttggtatcatcaacgttgcagatcaggatgcatgactattccggagacttt 12357084  T
Q  291 aatatagtcatat 303  Q
    |||||||||||||    
T  12357085 aatatagtcatat 12357097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 45311136 - 45311088
Alignment:
Q  190 gttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgac 238  Q
    ||||||||||||||||||||||||||| || |||||| |||| ||||||    
T  45311136 gttcagattgtcagatcagcttcgatctagagtagattcaataaatgac 45311088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 303
Target Start/End: Original strand, 19720246 - 19720317
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatat 303  Q
    ||||||||||||| || || ||| |||||||||| |||||||| ||||||| ||| |  |||||||||||||    
T  19720246 caatgactttgacgtcgtcaacgttgcagatccgaagacatgagtattccggagacttgaatatagtcatat 19720317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 218 - 333
Target Start/End: Complemental strand, 32778869 - 32778754
Alignment:
Q  218 agtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgt 317  Q
    |||| |||||| ||||||||||||  | || || ||  |||||||| |||||||||| ||||| | ||| |  ||||||||||||| | ||| |||  ||    
T  32778869 agtgcagatccgatcaatgacttttgcgtcgtcaactttgcagatctggagacatgagtattctggagacttgaatatagtcatatttgtagccataggt 32778770  T
Q  318 actttgccgttttatg 333  Q
    ||||||||||||||||    
T  32778769 actttgccgttttatg 32778754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 242
Target Start/End: Complemental strand, 36556015 - 36555902
Alignment:
Q  127 gtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagat 226  Q
    ||||||| |||||||||||||||  || |||||||||||  || |   |||||| || | |||||||| |||||||| ||| | | ||||||||||||||    
T  36556015 gtttgtttgtcgtctttgtgcgaaatt-gtttgtttttcccgtcttgttcaggtgttggttcggttcaaattgtcagttcaacct-gatccagtgtagat 36555918  T
Q  227 ccaatcaatgactttg 242  Q
    ||||| ||||||||||    
T  36555917 ccaattaatgactttg 36555902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 274
Target Start/End: Original strand, 5526039 - 5526081
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatga 274  Q
    ||||||||||| ||||||| ||| |||||||||||||||||||    
T  5526039 caatgactttggcatcatcaacgttgcagatccggagacatga 5526081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 333
Target Start/End: Original strand, 5989903 - 5989945
Alignment:
Q  291 aatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||    
T  5989903 aatatagtcatatgtgtaggcttttgtactttgtcgttttatg 5989945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 153
Target Start/End: Complemental strand, 18890832 - 18890779
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt 153  Q
    ||||||||| |||||| |||||||||||  |||||||||||| ||||||||||||    
T  18890832 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtc-ttgtgcgacgtt 18890779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 9992666 - 9992703
Alignment:
Q  1 agggtcaatttttggcacaaaatcacccctctaactcg 38  Q
    |||||||||||||| | |||||||||||||||||||||    
T  9992666 agggtcaatttttgacccaaaatcacccctctaactcg 9992703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 31874085 - 31874122
Alignment:
Q  1 agggtcaatttttggcacaaaatcacccctctaactcg 38  Q
    |||||||||||||| | |||||||||||||||||||||    
T  31874085 agggtcaatttttgacccaaaatcacccctctaactcg 31874122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 37658967 - 37659000
Alignment:
Q  1 agggtcaatttttggcacaaaatcacccctctaa 34  Q
    |||||||||||||| |||||||||||||||||||    
T  37658967 agggtcaatttttgacacaaaatcacccctctaa 37659000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 171; Significance: 9e-92; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 40775366 - 40775599
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  40775366 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgatcggttcagatt 40775464  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||||||||||||||| |||| |||||||||||||||||||| | ||||||||| ||||||||| |||||||| |||||||| ||||| |||||||||    
T  40775465 gtcagatcagcttcgatctagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccagagacatggttattccggagatttaaatatagt 40775564  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||| || ||||||||||||||||||||    
T  40775565 catatgtgtagacaattgtactttgccgttttatg 40775599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 47749833 - 47750066
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  47749833 gtgatttcgttgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgatcggttcagatt 47749931  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||||||| |||||||||||| |||||||||| ||||||| | |  |||||| | |||||||| ||||||||| |||||||||||||| |||||||||    
T  47749932 gtcagatcagtttcgatccagtgcagatccaatcgatgacttcggcggcatccatgttgcagatctggagacatggttattccgaagatttaaatatagt 47750031  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||||||||||||||||||||||||||    
T  47750032 catatgtgtaggcatttgtactttgccgttttatg 47750066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 26017673 - 26017440
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||    
T  26017673 gtgatttcgtcgtcttcgtgcgatgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtctttcttgtttctctcaggtatttgatcggttcagatt 26017575  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||| |||||||||||||||||| |||||||||||||||||||| | |||| |||| |||| || ||||||||||  ||||||| ||||| |||||||||    
T  26017574 gtcatatcagcttcgatccagtgcagatccaatcaatgactttggcgtcattcacgttgcaaattcggagacatggctattccggagatttaaatatagt 26017475  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||||||||||| |||||||||||||    
T  26017474 catatgtgtaggcatttgtaccttgccgttttatg 26017440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 30992838 - 30992605
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | |||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||| |||| ||||||||||||||||||||||||    
T  30992838 gtgattttgtcgtcttcgtgcgacgttgatttgttcgtcgtctttgtgcgacgtt-gtttgtctttcttggttctctcaggtatttgatcggttcagatt 30992740  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||| |||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||  ||||||| ||||| |||||||||    
T  30992739 gtcagatcaacttcgatctagtgcagatccaatcaatgactttgacatcatccacgttgcagatccggaggcatggctattccggagatttaaatatagt 30992640  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| || |||||||||| |||||||||||||    
T  30992639 catatgtgtatgcatttgtaccttgccgttttatg 30992605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 49167025 - 49167257
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||| ||||||||    
T  49167025 gtgatttcgtcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctcccaggtatttgatcgcttcagatt 49167122  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    || |||||||||||||||||||| ||||| |||||||||||||  | ||||||||| |||||||||||| ||||| |||||||| ||||| |||||||||    
T  49167123 gttagatcagcttcgatccagtgcagatctaatcaatgactttagcgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagt 49167222  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||||||||||||||||||||||||||    
T  49167223 catatgtgtaggcatttgtactttgccgttttatg 49167257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 7985991 - 7986224
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  7985991 gtgatttcgtcatcttcgtgtgacgttggtttgttcgtcgtctttgtgtgacgtt-gtttgtttttcttgtttctctcaggtatttgatccgttcagatt 7986089  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||| |||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||| | ||||| |||||||| ||||| |||||||||    
T  7986090 gtcaaatcagcttcgatccagtgcagatccaatcaatgactttgacgtcatccacgttgcagatccgaatacatggttattccggagatttaaatatagt 7986189  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    | || || ||| ||||||||||||| |||||||||    
T  7986190 cctaagtgtagacatttgtactttgtcgttttatg 7986224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 8611638 - 8611406
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||| |||||| |||||||| ||||||||    
T  8611638 gtgatttcgtcgtcttcgtgcgacgttggtt-gttagtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtgtttgatcgcttcagatt 8611541  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||| |||||||||||||||||| ||||||||||||| |||||| | ||||||||| |||||||||||| ||||| |||||||  ||||| |||||||||    
T  8611540 gtcatatcagcttcgatccagtgcagatccaatcaataactttggcgtcatccacgttgcagatccggaaacatggttattccagagatttaaatatagt 8611441  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||| ||||||||||||||||||||||    
T  8611440 catatgtgtaggtatttgtactttgccgttttatg 8611406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 40476807 - 40477039
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||| | ||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||  ||||||||    
T  40476807 gtgatttcgtcgtcttcgtacaacgttggtt-gttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgatcacttcagatt 40476904  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||||||||||||||| |||| |||||||||||||||||||||| ||||||||| || ||||||||| | |||||||||||| ||||| |||||||||    
T  40476905 gtcagatcagcttcgatcaagtgcagatccaatcaatgactttgacgtcatccacgttgtagatccggaaatatgattattccggagatttaaatatagt 40477004  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
     |||||| ||| |||||||||||||||||||||||    
T  40477005 aatatgtgtagacatttgtactttgccgttttatg 40477039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 99 - 319
Target Start/End: Complemental strand, 135160 - 134941
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||| | ||||||||||||||||||||||    
T  135160 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtttttgtgcgacgtt-gtttgattttcttgtttctcttaggtatttgatcggttcagatt 135062  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||| |||||||||||||||||| |||||||||||||||||||| | ||||||||| |||||||| ||||||||| ||||| |||| ||| |||||||||    
T  135061 gtcaaatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatctggagacatggttatttcgaatatttaaatatagt 134962  T
Q  299 catatgtataggcatttgtac 319  Q
    ||||||| ||||||| |||||    
T  134961 catatgtgtaggcatctgtac 134941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 11001943 - 11002175
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||||||| |||||||||| ||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||| ||||||||    
T  11001943 gtgatttcgtcgtcttcgtgagacgttggtt-gttcgtcgtctttgtgcaacgtt-gtttgtttttcttgtttctctcaggtatttgatcgcttcagatt 11002040  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||| ||||| ||||| |||||||||||||| | |||| |||| || ||||||| | ||||| |||||||| ||||| |||||||||    
T  11002041 gtcagatcagcttcgattcagtgcagatctaatcaatgactttggcgtcattcacgttgtagatccgaaaacatggttattccggagatttaaatatagt 11002140  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||||||||||||||||| |||||||    
T  11002141 catatgtgtaggcatttgtactttgccattttatg 11002175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 42490802 - 42491035
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||  |||||||||| ||||||||||||||||| | ||||||||||| || ||||||||||||||||||| |||||||||||||||||||||| |    
T  42490802 gtgatttcatcgtcttcgtgtgacgttggtttgttcgttgcctttgtgcgacatt-gtttgtttttcttgtttctctcaggtatttgatcggttcagact 42490900  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||||||||||||||| |||| ||||||| ||||||||| || | ||||||||| |||||||||||||||| | |||||||| | ||| |||||||||    
T  42490901 gtcagatcagcttcgatctagtgcagatccagtcaatgactgtggcgtcatccacgttgcagatccggagacacggttattccggatatttaaatatagt 42491000  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
     |||||| ||| |||||||||||||||||||||||    
T  42491001 aatatgtgtagacatttgtactttgccgttttatg 42491035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 99 - 332
Target Start/End: Complemental strand, 43807165 - 43806933
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||| |||||| |||||||||||| |||||| |||||||||||||||||    
T  43807165 gtgatttcgtcgtcttcgtgcgatgttggtttgttcgtcatctttgtgcgacgtt-gtttgtctttcttgtttctctcaggtgtttgatcggttcagatt 43807067  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    || ||||||||||||||| |||| |||||||||||||||||||| |  |||||||| |||||||||||||| |||  ||||||| | ||| |||||||||    
T  43807066 gtaagatcagcttcgatctagtgcagatccaatcaatgactttggcggcatccacgttgcagatccggagatatggctattccggatatttaaatatagt 43806967  T
Q  299 catatgtataggcatttgtactttgccgttttat 332  Q
    ||||||| || |||||||||  ||||||||||||    
T  43806966 catatgtgtaagcatttgtatcttgccgttttat 43806933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 24475441 - 24475684
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||  ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||    
T  24475441 gtgatttcgtcgtccacgtgcgacgttggtt-gttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgatcgcttcagatt 24475538  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacg-----------ctgcagatccggagacatgattattccgaagat 287  Q
    ||||||||||||||||||||||| |||| ||||||||||||||| | |||||||||            |||||||||| | ||||| |||||||| ||||    
T  24475539 gtcagatcagcttcgatccagtgcagattcaatcaatgactttggcgtcatccacgttgcatccacattgcagatccgaaaacatggttattccggagat 24475638  T
Q  288 tgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    | ||||||||||||||||  ||||||||||||||||||||||||||    
T  24475639 ttaaatatagtcatatgtgaaggcatttgtactttgccgttttatg 24475684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 115 - 333
Target Start/End: Original strand, 24470509 - 24470736
Alignment:
Q  115 cgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcga 214  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  24470509 cgtgcgacgttggtt-gttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatcagcttcga 24470606  T
Q  215 tccagtgtagatccaatcaatgactttgacatcatccacg-----------ctgcagatccggagacatgattattccgaagattgaaatatagtcatat 303  Q
    ||||||| |||| ||||||||||||||| | |||||||||            |||||||||| | ||||| |||||||| ||||| ||||||||||||||    
T  24470607 tccagtgcagattcaatcaatgactttggcgtcatccacgttgcatccacattgcagatccgaaaacatggttattccggagatttaaatatagtcatat 24470706  T
Q  304 gtataggcatttgtactttgccgttttatg 333  Q
    ||  ||||||||||||||||||||||||||    
T  24470707 gtgaaggcatttgtactttgccgttttatg 24470736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 8319414 - 8319647
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | ||||||||| ||||||||||||||||||||||||||||| || || |||||| |||||||||||| ||||| ||||||||||||||||||    
T  8319414 gtgattttgtcgtcttcgtacgacgttggtttgttcgtcgtctttgtgcaacctt-gtttgtctttcttgtttctctcaggcatttgatcggttcagatt 8319512  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    || |||||||||| ||||||||| ||| |||||||||||||||| | ||||||||| |||||||||||||||||| || ||||| |||||  |||||||     
T  8319513 gttagatcagctttgatccagtgcagacccaatcaatgactttggcgtcatccacgttgcagatccggagacatggttgttccggagatttgaatatagc 8319612  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    |||||||  | ||||||||| |||| | |||||||    
T  8319613 catatgtgcatgcatttgtaatttgtcattttatg 8319647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 153 - 333
Target Start/End: Complemental strand, 19895646 - 19895466
Alignment:
Q  153 ttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatcca 252  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||| | |||||||    
T  19895646 ttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcatatcagcttcgatccagtgcagattcaatcaatgactttggcgtcatcca 19895547  T
Q  253 cgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    || || |||| ||||||||||||||||| | ||||| |||||||||||||||  ||| || ||||||| ||||||||||||    
T  19895546 cgttgtagattcggagacatgattattctggagatttaaatatagtcatatgggtagacaattgtactgtgccgttttatg 19895466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 99 - 332
Target Start/End: Original strand, 772542 - 772774
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| ||||||||||| |||||  |||||||||||||||  || |||||| |||||||||||  ||||||||||| ||||||||||||    
T  772542 gtgatttcgtcgtcttagtgcgacgttgttttgtctgtcgtctttgtgcgatatt-gtttgtctttcttgtttcgttcaggtatttgttcggttcagatt 772640  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||||||||||| ||| |||| |||||||||||||||||||| | || || ||  || |||||| ||||||||| |||| || ||| ||||| |||||    
T  772641 gtcagatcagcttcaatctagtgcagatccaatcaatgactttggcgtcgtcaacattgaagatccagagacatgagtatttcggagaatgaaaaatagt 772740  T
Q  299 catatgtataggcatttgtactttgccgttttat 332  Q
    ||||||| ||||| ||||||||||| ||||||||    
T  772741 catatgtgtaggcttttgtactttgtcgttttat 772774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 132 - 333
Target Start/End: Original strand, 37399730 - 37399930
Alignment:
Q  132 ttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaat 231  Q
    |||||||||||||||||||||| |||||| |||||||||||| ||| ||||||||| | |||| |||||| ||| ||||||||||||||| |||||||||    
T  37399730 ttcgtcgtctttgtgcgacgtt-gtttgtctttcttgtttctttcaagtatttgattgattcaaattgtccgattagcttcgatccagtgcagatccaat 37399828  T
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    ||||||||||||| ||||||||| | || || |||||||||| ||||||   ||||| |||||||||||||||| ||| ||||||||||||| |||||||    
T  37399829 caatgactttgacgtcatccacgttacaaattcggagacatggttattcatgagatttaaatatagtcatatgtgtagacatttgtactttgtcgtttta 37399928  T
Q  332 tg 333  Q
    ||    
T  37399929 tg 37399930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 23732408 - 23732175
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||| || | |||||| |||||||||||  ||||||||||| ||||||||||||    
T  23732408 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcatctttgtgcgtcgct-gtttgtctttcttgtttcgttcaggtatttggtcggttcagatt 23732310  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||| || ||||||||||||||| |||||||||||||||||||| | || |||||| |||||||| ||||| | || |||| |  | | |  |||||| |    
T  23732309 gtcaaattagcttcgatccagtgcagatccaatcaatgactttggcgtcgtccacgttgcagatctggagaaacgactatttcagatacttgaatataat 23732210  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| || || ||||||||||| |||||||||    
T  23732209 catatgtgtatgcttttgtactttgtcgttttatg 23732175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 28015456 - 28015689
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||  |||||| ||| |||||||||||||||||||||||||| |||||  |||||||||||  ||||||||||| ||||||||||||    
T  28015456 gtgatttcgtcgtcttaatgcgaccttgttttgttcgtcgtctttgtgcgacgtt-gtttgcctttcttgtttcgttcaggtatttgttcggttcagatt 28015554  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    || |||||||||||||||||||| ||||| ||||||||||||||   || || ||  |||||||||||||||||   ||||| | ||  | ||||||| |    
T  28015555 gttagatcagcttcgatccagtgcagatcaaatcaatgactttggagtcgtcaacattgcagatccggagacataggtattctggaggcttaaatatatt 28015654  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||| || ||||||||||||||||||    
T  28015655 catatgtgtaggctttagtactttgccgttttatg 28015689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 99 - 270
Target Start/End: Complemental strand, 25855235 - 25855065
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||  | |||||||||  ||||| ||||||||||||||||||||| ||    
T  25855235 gtgattttgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtta-tatgtttttctattttctctcaggtatttgatcggttcaggtt 25855137  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagac 270  Q
    ||||||| ||||||||||||||| | |||||||||||||||||| |  |||||||  | |||||||||||||    
T  25855136 gtcagattagcttcgatccagtgcaaatccaatcaatgactttggctccatccacatttcagatccggagac 25855065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 29804690 - 29804461
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||| | |||||||| || |||||| |||||||||||||||||||  ||| |||||||||||     ||||| |||| ||| ||||||||    
T  29804690 gtgatttcgtcgtcatagtgcgacgctgttttgtttgtcgtctttgtgcgacgttgttttttttttcttgtt-----caggtgtttgttcgattcagatt 29804596  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
     ||||||||||||||||||  || |||||||| ||||||||||| ||||||| ||| ||||||||||||| ||||  ||||||| | ||| |||||||||    
T  29804595 atcagatcagcttcgatccgatgcagatccaaccaatgactttggcatcatcaacgttgcagatccggaggcatggctattccggatatttaaatatagt 29804496  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||| | ||||| | |||||||||||||||||||    
T  29804495 catatttgtaggcttatgtactttgccgttttatg 29804461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 47156491 - 47156717
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatc---ggttcag 195  Q
    ||||||||| |||||||||| |||||||||| ||||||||||||||||| |||||     ||||     |||||| |||||||||||||    | |||||    
T  47156491 gtgatttcgtcgtcttcgtgtgacgttggtt-gttcgtcgtctttgtgcaacgtt-----gttt-----gtttctctcaggtatttgatgaatgcttcag 47156579  T
Q  196 attgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatat 295  Q
    ||||||| |||| ||||||| ||||| ||||| ||||||||||||||  |||||||||| |||||||||||| ||||| |||||||| ||||| ||||||    
T  47156580 attgtcatatcaacttcgatacagtgcagatctaatcaatgactttggtatcatccacgttgcagatccggaaacatggttattccggagatttaaatat 47156679  T
Q  296 agtcatatgtataggcatttgtactttgccgttttatg 333  Q
    |||||||||| ||| ||||||||||||| |||||||||    
T  47156680 agtcatatgtgtagacatttgtactttgtcgttttatg 47156717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 99 - 273
Target Start/End: Original strand, 9933946 - 9934115
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||    |||||| |||||||||||  ||||||||||| | | ||||||||    
T  9933946 gtgatttcgccgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgac----gtttgtctttcttgtttcgttcaggtatttg-ttgattcagatt 9934040  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatg 273  Q
    ||||||||||||| ||||||||| ||||| ||||||||||||||   || || ||| ||||||||||||||||||    
T  9934041 gtcagatcagctttgatccagtgcagatcaaatcaatgactttggagtcgtcaacgttgcagatccggagacatg 9934115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 103 - 331
Target Start/End: Original strand, 44681563 - 44681790
Alignment:
Q  103 tttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtca 202  Q
    ||||| |||||  ||| |||||||||||||||||||| |||||| |||||| |||||| |||||||||||  | || |||||  |  |||||||||||||    
T  44681563 tttcgtcgtctcagtgtgacgttggtttgttcgtcgtttttgtgggacgtt-gtttgtctttcttgtttcgtttagatatttattatgttcagattgtca 44681661  T
Q  203 gatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcata 302  Q
     | |||||||||||| |||||||||||||||||||||||||||| ||||| | ||||||| ||||||||||  ||||||  ||| | ||| |||||||||    
T  44681662 aaccagcttcgatccggtgtagatccaatcaatgactttgacataatccaggttgcagattcggagacatgggtattccagagacttaaaaatagtcata 44681761  T
Q  303 tgtataggcatttgtactttgccgtttta 331  Q
    | | ||| | ||||||||||| |||||||    
T  44681762 tatgtagacttttgtactttgtcgtttta 44681790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 132 - 335
Target Start/End: Original strand, 39090220 - 39090422
Alignment:
Q  132 ttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaat 231  Q
    |||||| ||||||||||||||| |||||| |||||||||||  ||||||||||| |||||||||||||||| |||||||||||||||||| | ||| | |    
T  39090220 ttcgtcatctttgtgcgacgtt-gtttgtctttcttgtttcgttcaggtatttgttcggttcagattgtcatatcagcttcgatccagtgcaaatcaatt 39090318  T
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    |||||||||||   ||||| | | ||||||| | ||||||||| |||| |   || | |||||||||||||||| ||||| || |||||||||| |||||    
T  39090319 caatgactttggagtcatcaatgttgcagattcagagacatgagtattacagtgacttaaatatagtcatatgtgtaggctttagtactttgccatttta 39090418  T
Q  332 tgat 335  Q
    ||||    
T  39090419 tgat 39090422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 99 - 329
Target Start/End: Complemental strand, 5025071 - 5024842
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| ||||||| ||| |||||||||||||||||||||||||| ||||   |||||| ||||  | ||||||||| ||||||||||||    
T  5025071 gtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgtt-gttttcctttcttatttcatttaggtatttgttcggttcagatt 5024973  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||||||| |||||||||||  ||||| ||||||||||||||   || || | | |||||||||||||||||   ||||| | ||| | |||||||||    
T  5024972 gtcagatcagattcgatccagtccagatcaaatcaatgactttggagtcgtcaatgttgcagatccggagacataggtattctggagacttaaatatagt 5024873  T
Q  299 catatgtataggcatttgtactttgccgttt 329  Q
    || |||| ||||| || ||| |||| |||||    
T  5024872 caaatgtgtaggctttagtattttgtcgttt 5024842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 46918499 - 46918731
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| | |||| |||| || |||||||||| ||||||||||||||  ||| ||||||  ||||||||||  ||||| ||||| ||||||||||||    
T  46918499 gtgatttcgtcatctttgtgcaacattggtttgtttgtcgtctttgtgcggtgtt-gtttgtcattcttgtttcgttcagg-atttgttcggttcagatt 46918596  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||| |||||| || | || ||||||||||||||    |  | || | ||||||||| ||||||||| ||||  | ||| |  ||||||||    
T  46918597 gtcagatcagcttagatccaatgcaaattcaatcaatgactttagtgttgtgcatgttgcagatccagagacatgagtattttggagacttgaatatagt 46918696  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||||||||| |||||||||||||||||||||    
T  46918697 catatgtataggcttttgtactttgccgttttatg 46918731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 43483699 - 43483920
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||| ||||||||            |||| ||||||||||||    
T  43483699 gtgatttcgccgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacg-ttgtttgtctttcttgt------------tttgttcggttcagatt 43483785  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||| |||||| ||||||||||| | ||| |||||||||||||    ||||| ||| ||||||||||||||||    ||||||| |||   |||||||||    
T  43483786 gtcaaatcagcatcgatccagtgcatatcaaatcaatgacttttgagtcatcaacgttgcagatccggagacaaaggtattccggagacataaatatagt 43483885  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||| ||  ||||||| |||||||||    
T  43483886 catatgtgtaggctttaatactttgtcgttttatg 43483920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 182 - 333
Target Start/End: Complemental strand, 21552388 - 21552237
Alignment:
Q  182 tttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattcc 281  Q
    ||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||| | ||||| ||| |||||||||| || ||||| |||| |    
T  21552388 tttgatcggttcagattgtcagatccgcttcgatccactgcagatccaaccaatgactttggcgtcatcaacgttgcagatccgaaggcatgactatttc 21552289  T
Q  282 gaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    | |||||  ||||||||||||| | ||||| | |||||||||| ||||||||    
T  21552288 ggagattttaatatagtcatatttgtaggcttatgtactttgctgttttatg 21552237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 33530483 - 33530257
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | |||||| || ||||||||  ||||||||||||||||||||| ||||||||  |||| ||        || ||||||| ||||||||||||    
T  33530483 gtgattttgtcgtcttagtacgacgttgtgttgttcgtcgtctttgtgcgaagtttgttttgttttgtt--------catgtatttgttcggttcagatt 33530392  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||| |||||||| ||||||||| | ||||||||||||| |||| | ||||| ||| ||||||||| ||||||||| |||| || ||| |  ||||||||    
T  33530391 gtcaaatcagcttagatccagtgcaaatccaatcaatgaatttggcgtcatcaacgttgcagatcctgagacatgagtatttcggagacttgaatatagt 33530292  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    |||| || ||||  |||||| |||||||| |||||    
T  33530291 cataagtgtaggtttttgtattttgccgtgttatg 33530257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 99 - 332
Target Start/End: Original strand, 14707682 - 14707913
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| | |||| ||| | |||||||||||| ||||| |||||||| |||| |||||| |||||||||||  | ||||||||| ||| |||| |||    
T  14707682 gtgatttcgtcatcttagtgtggcgttggtttgttagtcgtttttgtgcggcgtt-gtttgtctttcttgtttcatttaggtatttgttcgattcaaatt 14707780  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||| ||||| |||||||||| || ||||||||| |||||||||  |||| |||| | |||||||| | |||||||  ||||| | | |    ||||||||    
T  14707781 gtctgatcatcttcgatccaatgcagatccaattaatgactttatcatcgtccatgttgcagatctgaagacatg-gtattctggatacatgaatatagt 14707879  T
Q  299 catatgtataggcatttgtactttgccgttttat 332  Q
    ||||||| ||||| ||||||||||||| ||||||    
T  14707880 catatgtgtaggcttttgtactttgccattttat 14707913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 196 - 333
Target Start/End: Complemental strand, 45949598 - 45949461
Alignment:
Q  196 attgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatat 295  Q
    ||||||| ||||||||||||| |||| |||||||||||||||||||| | || || ||| ||||||||||||| ||||| ||||||| |||||  |||||    
T  45949598 attgtcatatcagcttcgatcaagtgcagatccaatcaatgactttggcgtcgtcaacgttgcagatccggaggcatgactattccggagattttaatat 45949499  T
Q  296 agtcatatgtataggcatttgtactttgccgttttatg 333  Q
    |||||||| | ||||| | |||||||||| ||||||||    
T  45949498 agtcatatttgtaggcttatgtactttgctgttttatg 45949461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 217
Target Start/End: Complemental strand, 13008688 - 13008571
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | |||||| ||||||||||||||||||||||||||||||||| || |||||||| |||||| ||||  ||||||||||| ||||||||||||    
T  13008688 gtgattttgtcgtcttagtgcgacgttggtttgttcgtcgtctttgtgcggcg-ttgtttgtctttcttatttcgttcaggtatttgttcggttcagatt 13008590  T
Q  199 gtcagatcagcttcgatcc 217  Q
    |||| ||||| || |||||    
T  13008589 gtcatatcaggtttgatcc 13008571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 192 - 333
Target Start/End: Original strand, 2532132 - 2532273
Alignment:
Q  192 tcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaa 291  Q
    |||||||||||||||| ||||||||||||| |||||||| ||||||||||| | ||||| ||| ||||||||||||| ||||  ||||||| ||| |  |    
T  2532132 tcagattgtcagatcatcttcgatccagtgcagatccaaccaatgactttggcgtcatcaacgttgcagatccggaggcatggctattccggagaattta 2532231  T
Q  292 atatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||| | |||||   |||||||| ||||||||||    
T  2532232 atatagttatatttgtaggctaatgtacttttccgttttatg 2532273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 333
Target Start/End: Complemental strand, 41748509 - 41748309
Alignment:
Q  132 ttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaat 231  Q
    |||| |||||| |||||||||| |||||| ||||||||||   |  |||||||| ||||||||||| ||||||||| |||||||| | || ||||| |||    
T  41748509 ttcgccgtcttagtgcgacgtt-gtttgtctttcttgttttgtttgggtatttgttcggttcagatcgtcagatcaacttcgatcaaatgcagatcaaat 41748411  T
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    |||||||||||   ||||| ||   ||||||| ||||||| |  ||||||| ||| | ||||||||| |||||| ||||  || ||||||||||||||||    
T  41748410 caatgactttggagtcatcaacatcgcagatctggagacaagggtattccggagacttaaatatagttatatgtgtaggttttagtactttgccgtttta 41748311  T
Q  332 tg 333  Q
    ||    
T  41748310 tg 41748309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 99 - 242
Target Start/End: Complemental strand, 10250496 - 10250356
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||||||||   ||| ||||||| ||||||||||||||||||| | |||| |||||| ||| || ||||  ||||| ||||| || |||||||||    
T  10250496 gtgatttcgccgtcg--gtgtgacgttgttttgttcgtcgtctttgtgtggcgtt-gtttgtcttttttatttcgttcaggaatttgttccgttcagatt 10250400  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttg 242  Q
    |||||| ||||||||||| |||| ||||| ||||||||||||||    
T  10250399 gtcagaacagcttcgatcgagtgcagatcaaatcaatgactttg 10250356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 99 - 263
Target Start/End: Complemental strand, 23177598 - 23177435
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    |||||||| ||||||| ||||||| ||||||| ||||||||||||||||| || |||| ||| ||||||||||   ||||||||||| | |||||| |||    
T  23177598 gtgatttctccgtcttagtgcgaccttggttttttcgtcgtctttgtgcggcg-ttgtctgtctttcttgttttgttcaggtatttgtttggttcaaatt 23177500  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatc 263  Q
    | || ||||||||||||   || || ||| ||||||| |||||| | ||||||||| ||||||||    
T  23177499 gccaaatcagcttcgatatggtataaatcaaatcaatcactttggcgtcatccacgttgcagatc 23177435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 191 - 333
Target Start/End: Complemental strand, 21329222 - 21329080
Alignment:
Q  191 ttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattga 290  Q
    ||||||||||||||||| |||||||| |||| |||||||| ||||||||||| | | ||| ||| ||||||||||| | ||||| ||||||  | |||      
T  21329222 ttcagattgtcagatcaacttcgatctagtgcagatccaaccaatgactttggcgttatcaacgttgcagatccgggggcatgactattccagatatttt 21329123  T
Q  291 aatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||||||||| | ||||| | || ||||||||||||||||    
T  21329122 aatatagtcatatttgtaggcttgtgcactttgccgttttatg 21329080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 229
Target Start/End: Original strand, 22751559 - 22751666
Alignment:
Q  121 acgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagt 220  Q
    ||||||||||||||||||||||| |||| |||| |||||  |||||||||||  |||  |||||| || ||||||||||||||||||||||||||||| |    
T  22751559 acgttggtttgttcgtcgtctttatgcggcgtt-gtttgcctttcttgtttcgttcaactatttgttcagttcagattgtcagatcagcttcgatccaat 22751657  T
Q  221 gtagatcca 229  Q
    | |||||||    
T  22751658 gcagatcca 22751666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 333
Target Start/End: Complemental strand, 37890451 - 37890272
Alignment:
Q  153 ttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatcca 252  Q
    ||||||||||||||||||||  ||| ||||||| ||| ||||||||||||||||||||| |||||  || ||||||| |||||||| ||  | || ||||    
T  37890451 ttgtttgtttttcttgtttcgttcacgtatttgttcgtttcagattgtcagatcagctttgatccgctgcagatccagtcaatgacattagcgtcgtcca 37890352  T
Q  253 cgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    || |||| || ||||  ||||  ||||||||||| |  |||||  |||||||| ||| | |||||||||| ||||||||||    
T  37890351 cgttgcaaattcgga-tcatgtgtattccgaagacttgaatatgatcatatgtctagacttttgtacttttccgttttatg 37890272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 330
Target Start/End: Complemental strand, 38649372 - 38649143
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||| ||| |||||| ||| ||| ||| |||||| ||||||||||||||||| |||||||  |||||| ||||  ||| ||||||| || | |||||||    
T  38649372 gtgatctcgtcgtcttagtgagaccttgttttgtttgtcgtctttgtgcgacg-ttgtttgcctttcttttttcgttcaagtatttgttc-gatcagatt 38649275  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccgg-agacatgattattccgaagattgaaatatag 297  Q
    || ||||||||||||||||| || | ||| ||||||||||||||   || || ||  || ||||| || |||||||  ||||||| ||| | ||||||||    
T  38649274 gttagatcagcttcgatcca-tgcatatcaaatcaatgactttggagtcgtcaacattgtagatctggaagacatgggtattccggagacttaaatatag 38649176  T
Q  298 tcatatgtataggcatttgtactttgccgtttt 330  Q
    |||||||| || || || |||||||||||||||    
T  38649175 tcatatgtgtaagctttagtactttgccgtttt 38649143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 235
Target Start/End: Complemental strand, 24045279 - 24045160
Alignment:
Q  116 gtgcgacgttg-gtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcga 214  Q
    ||||||||||| |||||||||||||||||||| | | || |||||| ||||||||||   ||| ||||||||||| ||||||||||||||||| ||| ||    
T  24045279 gtgcgacgttgtgtttgttcgtcgtctttgtgtggcatt-gtttgtatttcttgttttgctcatgtatttgatcgattcagattgtcagatcaacttaga 24045181  T
Q  215 tccagtgtagatccaatcaat 235  Q
    || |||| |||| ||||||||    
T  24045180 tctagtgcagattcaatcaat 24045160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 223 - 333
Target Start/End: Complemental strand, 22379601 - 22379491
Alignment:
Q  223 agatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtacttt 322  Q
    ||||||| ||||||||||||||||| || ||| |||||||||| |||||||| ||||||  ||| |  |||||||||||||||  |||  ||| ||||||    
T  22379601 agatccagtcaatgactttgacatcttcaacgttgcagatccgaagacatgagtattccagagacttgaatatagtcatatgtgcaggtttttttacttt 22379502  T
Q  323 gccgttttatg 333  Q
    |||||||||||    
T  22379501 gccgttttatg 22379491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 330
Target Start/End: Original strand, 39707501 - 39707613
Alignment:
Q  218 agtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgt 317  Q
    |||| |||||||||||||||||||||||||||  ||| |||| |||||||||||||| ||||||| ||| |  |||||| || ||| | || |||| | |    
T  39707501 agtgcagatccaatcaatgactttgacatcattaacgttgcatatccggagacatgagtattccggagacttgaatataatcgtatttgtatgcatatat 39707600  T
Q  318 actttgccgtttt 330  Q
    |||||||||||||    
T  39707601 actttgccgtttt 39707613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 333
Target Start/End: Complemental strand, 14733962 - 14733847
Alignment:
Q  218 agtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgt 317  Q
    |||| ||||||||  |||||||||| | ||||| ||  ||||||||||||| ||||||||||||||| |||  ||||||||||||| | ||||| | ||     
T  14733962 agtgcagatccaacaaatgactttggcgtcatcaacattgcagatccggaggcatgattattccgaaaattttaatatagtcatatttgtaggcttatgc 14733863  T
Q  318 actttgccgttttatg 333  Q
    |||||||| |||||||    
T  14733862 actttgccattttatg 14733847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 34594537 - 34594304
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgt-ttttcttgtttctatcaggtatttgatcggttcagat 197  Q
    |||| |||| |||||| |||||| |||| |||||| |||||||||||||||| || |||||| ||||||   || | ||| || |||| || ||||| ||    
T  34594537 gtgacttcgtcgtcttagtgcgaagttgttttgtttgtcgtctttgtgcgacatt-gtttgtcttttctctcttgt-tcaagtgtttgttcagttcaaat 34594440  T
Q  198 tgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatag 297  Q
    | ||| ||||||||| ||| |||| |||||||| |||||||||||   ||||| ||| || ||| ||| || ||||| ||||||| |  ||  |||||||    
T  34594439 tatcatatcagcttcaatctagtgcagatccaaccaatgactttggtgtcatcaacgttgtagacccgaaggcatgactattccggaacttttaatatag 34594340  T
Q  298 tcatatgtataggcatttgtactttgccgttttatg 333  Q
    |||| | | ||||||| || ||||||||||||||||    
T  34594339 tcatgtttgtaggcatatgcactttgccgttttatg 34594304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 110 - 333
Target Start/End: Original strand, 34893221 - 34893439
Alignment:
Q  110 gtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagc 209  Q
    ||||| ||||| ||||| |||||||||||||||||| | |  || |||||| |||||||||||    ||||||||| |   ||||| |||||||||||||    
T  34893221 gtcttagtgcgtcgttgttttgttcgtcgtctttgtacaatctt-gtttgtctttcttgtttcgt--aggtatttgtttcattcagtttgtcagatcagc 34893317  T
Q  210 ttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtatag 309  Q
    || ||||||||| ||||| ||| ||||||||||   || || ||| |||| ||||||||||  |  ||||| | ||  | |||||||||||||||| |||    
T  34893318 tttgatccagtgcagatcaaattaatgactttggagtcctcaacgttgcaaatccggagac--gtatattctgcaggcttaaatatagtcatatgtgtag 34893415  T
Q  310 gcatttgtactttgccgttttatg 333  Q
    || || ||||||||  ||||||||    
T  34893416 gctttagtactttgttgttttatg 34893439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 232 - 333
Target Start/End: Complemental strand, 44482757 - 44482656
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    |||||||||||   || || ||| ||||||||||||||||||| ||||||| |||    ||||||||||||| | ||||||| |||||||||||||||||    
T  44482757 caatgactttggtgtcgtcaacgttgcagatccggagacatgagtattccggagacattaatatagtcatatttgtaggcatatgtactttgccgtttta 44482658  T
Q  332 tg 333  Q
    ||    
T  44482657 tg 44482656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 333
Target Start/End: Original strand, 5684600 - 5684702
Alignment:
Q  231 tcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttt 330  Q
    ||||| ||||||||||| || ||| | ||||||||||||||  | ||||||  |||    ||||||||||||| ||||||||| ||||||||||||||||    
T  5684600 tcaattactttgacatcgtcaacgttacagatccggagacaacactattccagagacatgaatatagtcatatttataggcatatgtactttgccgtttt 5684699  T
Q  331 atg 333  Q
    |||    
T  5684700 atg 5684702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 333
Target Start/End: Original strand, 5709650 - 5709752
Alignment:
Q  231 tcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttt 330  Q
    ||||| ||||||||||| || ||| | ||||||||||||||  | ||||||  |||    ||||||||||||| ||||||||| ||||||||||||||||    
T  5709650 tcaattactttgacatcgtcaacgttacagatccggagacaacactattccagagacatgaatatagtcatatttataggcatatgtactttgccgtttt 5709749  T
Q  331 atg 333  Q
    |||    
T  5709750 atg 5709752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 14734064 - 14734000
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgttttt 164  Q
    ||||||||| |||||| ||||||||||| |||||| ||||||||||||||||| |||||||| |||    
T  14734064 gtgatttcgtcgtcttagtgcgacgttgttttgtttgtcgtctttgtgcgacg-ttgtttgtcttt 14734000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 333
Target Start/End: Original strand, 36350300 - 36350499
Alignment:
Q  132 ttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaat 231  Q
    ||||||||||| ||| |||||| |||||| ||| ||||||   |||| |||||| |||  | ||||||||| |||||||| ||| |||||  ||||||||    
T  36350300 ttcgtcgtcttagtgtgacgtt-gtttgtcttttttgtttggttcagatatttgttcgacttagattgtcatatcagctttgattcagtgcggatccaat 36350398  T
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    ||||| ||||| | || || ||| ||||||| ||||||||| | ||||| | ||| |  ||||| || |||||| ||||  ||||||||||| | |||||    
T  36350399 caatggctttggcgtcgtcaacgttgcagattcggagacat-agtattctggagacttgaatatggttatatgtgtaggtttttgtactttgtcatttta 36350497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 218 - 322
Target Start/End: Original strand, 29352443 - 29352547
Alignment:
Q  218 agtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgt 317  Q
    ||||||||| | ||||||||||||  | || || ||| |||||||||||||| |||| |||||| |||| |  ||||||||||||| | ||||||| |||    
T  29352443 agtgtagattcgatcaatgacttttgcgtcgtcaacgttgcagatccggagagatgagtattccaaagacttgaatatagtcatatttgtaggcatatgt 29352542  T
Q  318 acttt 322  Q
    |||||    
T  29352543 acttt 29352547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 16273588 - 16273703
Alignment:
Q  207 agcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgta 306  Q
    |||||| ||| |||| ||||| ||||||||||| ||   || || ||| ||||||||||||||||||  ||||||| ||| | ||||||| ||||||||     
T  16273588 agcttctatcaagtgcagatcaaatcaatgactctggactcgtcaacgttgcagatccggagacatggatattccggagacttaaatataatcatatgtg 16273687  T
Q  307 taggcatttgtacttt 322  Q
    ||||| || |||||||    
T  16273688 taggctttagtacttt 16273703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 333
Target Start/End: Complemental strand, 4621271 - 4621154
Alignment:
Q  218 agtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaa--atatagtcatatgtataggcattt 315  Q
    |||| |||||| |||||||||||||   ||||| ||  ||||||||||||||||||| |||| || ||| | ||  |||||||||||| | ||||||| |    
T  4621271 agtgcagatccgatcaatgactttggtgtcatcaacattgcagatccggagacatgagtatttcggagacttaaatatatagtcatatttgtaggcatat 4621172  T
Q  316 gtactttgccgttttatg 333  Q
    |||||||| | |||||||    
T  4621171 gtactttgtcattttatg 4621154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 32312666 - 32312899
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||  |||||| |||| |||||| |||||||||||||||||||| | ||| ||| || |||||  | |   ||| || |||| | | |||| |||    
T  32312666 gtgatttcttcgtcttagtgcaacgttgttttgttcgtcgtctttgtgcaatgtt-gttagtctttctcatcttgttcatgtgtttgtttgattcatatt 32312764  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||| ||||||||||||| |||| | ||||||||||||| ||| || ||||| ||| ||| ||| | ||| ||| | |||| || ||| |  ||||||||    
T  32312765 gtcatatcagcttcgatcaagtgcatatccaatcaatgattttaacgtcatcaacgttgccgattcagaggcattactatttcggagacttgaatatagt 32312864  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||| |  |||| | |||| |||| |||||||||    
T  32312865 catatttggaggcttatgtagtttgtcgttttatg 32312899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 266
Target Start/End: Complemental strand, 35135177 - 35135033
Alignment:
Q  120 gacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccag 219  Q
    ||||||||||||||| ||||||||||| | |||| || ||| |||| | ||||  ||||| | ||  || ||||| ||| ||||||| ||||||||| ||    
T  35135177 gacgttggtttgttc-tcgtctttgtgtggcgtt-gtctgtctttcctatttcattcaggaaattattcagttcaaattatcagatcggcttcgatcaag 35135080  T
Q  220 tgtagatccaatcaatgactttgacatcatccacgctgcagatccgg 266  Q
    || |||||||||||||||||||    ||||||||  |||||||||||    
T  35135079 tgcagatccaatcaatgactttcgtgtcatccacattgcagatccgg 35135033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 330
Target Start/End: Complemental strand, 35363018 - 35362892
Alignment:
Q  204 atcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatat 303  Q
    |||||||| ||||||||| | || ||||||||||||||||  || || ||| ||||||| || |||||||  |||| || ||| |  |||||| ||||||    
T  35363018 atcagctttgatccagtgcaaatacaatcaatgactttgatgtcgtcaacgttgcagattcgaagacatggatatttcggagacttgaatataatcatat 35362919  T
Q  304 gtataggcatttgtactttgccgtttt 330  Q
    || ||| | ||||||||| ||||||||    
T  35362918 gtgtagccttttgtacttagccgtttt 35362892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 333
Target Start/End: Complemental strand, 36719436 - 36719335
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    ||||||||||| | ||||| ||| | ||||||||||||||||| |||| || |||    ||||||||||||| | |||||||  |||||| |||||||||    
T  36719436 caatgactttggcgtcatcaacgttccagatccggagacatgagtatttcggagacatgaatatagtcatatttgtaggcataagtacttcgccgtttta 36719337  T
Q  332 tg 333  Q
    ||    
T  36719336 tg 36719335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 332
Target Start/End: Complemental strand, 17473636 - 17473536
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    ||||||||||| | || || |||  |||||||| ||||||||| ||||||| |||  | ||||||||||||| | || |||| ||||||||||| |||||    
T  17473636 caatgactttggcgtcgtcaacgtcgcagatccagagacatgagtattccggagacaggaatatagtcatatttgtaagcatatgtactttgccatttta 17473537  T
Q  332 t 332  Q
    |    
T  17473536 t 17473536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 332
Target Start/End: Original strand, 17579578 - 17579678
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    ||||||||||| | || || |||  |||||||| ||||||||| ||||||| |||  | ||||||||||||| | || |||| ||||||||||| |||||    
T  17579578 caatgactttggcgtcgtcaacgtcgcagatccagagacatgagtattccggagacaggaatatagtcatatttgtaagcatatgtactttgccatttta 17579677  T
Q  332 t 332  Q
    |    
T  17579678 t 17579678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 332
Target Start/End: Original strand, 40657840 - 40657945
Alignment:
Q  231 tcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagatt----gaaatatagtcatatgtataggcatttgtactttgccg 326  Q
    |||||||||||| | | ||||||| |||||||||||||||||  |||||||| ||| |     ||||||| |||||||| || ||||||||||| || ||    
T  40657840 tcaatgactttggcgttatccacgttgcagatccggagacatagttattccggagacttaaataaatataatcatatgtgtatgcatttgtactctgtcg 40657939  T
Q  327 ttttat 332  Q
    ||||||    
T  40657940 ttttat 40657945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 211
Target Start/End: Original strand, 16263486 - 16263589
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||| || ||||||| ||| ||||||||||||| |||||||||| |     |||||    |||||  ||||||||||| ||||||||||||    
T  16263486 gtgatttcgtcgtgttagtgcgaccttgttttgttcgtcgtccttgtgcgacgat-----gtttt----gtttcgttcaggtatttgttcggttcagatt 16263576  T
Q  199 gtcagatcagctt 211  Q
    |||| ||||||||    
T  16263577 gtcaaatcagctt 16263589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 333
Target Start/End: Original strand, 18753984 - 18754027
Alignment:
Q  290 aaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    |||||||||||||||| ||| ||||||||||||| |||||||||    
T  18753984 aaatatagtcatatgtgtagacatttgtactttgtcgttttatg 18754027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 234 - 333
Target Start/End: Complemental strand, 37375928 - 37375829
Alignment:
Q  234 atgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||||| | || || ||| |||||||| |||||||||| ||||| | |||    ||||||||||||| | ||||||| ||||||||| |||||||||    
T  37375928 atgactttggcgtcgtcaacgttgcagatctggagacatgagtattcaggagacatgaatatagtcatatttgtaggcatatgtactttgtcgttttatg 37375829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 303
Target Start/End: Original strand, 40761825 - 40761896
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatat 303  Q
    ||||||||||| |||| || ||| | ||||||||||||||||| ||||||| |||   ||||||||||||||    
T  40761825 caatgactttggcatcgtcaacgttacagatccggagacatgagtattccggagacataaatatagtcatat 40761896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 333
Target Start/End: Original strand, 3266650 - 3266724
Alignment:
Q  259 agatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    |||||||||||||||| || | || ||| | |||||||||||||| | |||||||  |||||||| |||||||||    
T  3266650 agatccggagacatgagtacttcggagacttaaatatagtcatatttgtaggcataagtactttgtcgttttatg 3266724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 333
Target Start/End: Original strand, 22751692 - 22751734
Alignment:
Q  291 aatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||||||||||| ||||| |||||||||| ||||||||||    
T  22751692 aatatagtcatatgtgtaggcttttgtactttaccgttttatg 22751734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 333
Target Start/End: Original strand, 45482325 - 45482402
Alignment:
Q  256 tgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||||||||||||||| ||||||| ||| |  ||||||||||||| | |||| ||   ||||||| |||||||||    
T  45482325 tgcagatccggagacatgagtattccggagacttgaatatagtcatatttgtaggtatagatactttgtcgttttatg 45482402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 313
Target Start/End: Complemental strand, 21954715 - 21954627
Alignment:
Q  225 atccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcat 313  Q
    |||| ||||||||||||| | || || ||| ||||||||||||| ||||| ||||||| | | |  ||||||||||||| || ||||||    
T  21954715 atccgatcaatgactttggcgtcgtcaacgttgcagatccggagtcatgagtattccggacacttgaatatagtcatatttacaggcat 21954627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 167; Significance: 2e-89; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 46716909 - 46716676
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||    
T  46716909 gtgatttcgtcatcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtctttcttgtttctctcaggtatttgatcggttcagatt 46716811  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| |||||||||||||||||||| | ||||||||| |||||||||||||| |||  ||||||| ||||| |||||||||    
T  46716810 gtcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggagatatggctattccggagatttaaatatagt 46716711  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||||||||||| |||||||||||||    
T  46716710 catatgtgtaggcatttgtaccttgccgttttatg 46716676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 4634382 - 4634615
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  4634382 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgatcagttcagatt 4634480  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| ||||||||||||||||||||   ||||||||| |||||||||||| ||||| |||||||| | ||| |||||||||    
T  4634481 gtcagatcagcttcgatccagtgcagatccaatcaatgactttggtgtcatccacgttgcagatccggatacatggttattccggatatttaaatatagt 4634580  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||||| |||||||||| |||||||||    
T  4634581 catatgtgtaggcaattgtactttgtcgttttatg 4634615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 14542527 - 14542294
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  14542527 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgatcagttcagatt 14542429  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| ||||||||||||||||||||   ||||||||  |||||||||||| ||||| |||||||| ||||| |||||||||    
T  14542428 gtcagatcagcttcgatccagtgcagatccaatcaatgactttgttgtcatccactttgcagatccggatacatggttattccggagatttaaatatagt 14542329  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||| | |||||| ||||||||||||||||||||    
T  14542328 catatatgtaggcaattgtactttgccgttttatg 14542294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 23067863 - 23067630
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||    
T  23067863 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtctttcttgtttctctcaggtatttgatcggttcagatt 23067765  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| |||||||||||||||||||| | ||||||||| ||||||| ||||||||||  ||||||| | ||| |||||||||    
T  23067764 gtcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagattcggagacatggctattccggatatttaaatatagt 23067665  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||| ||||||| |||||||||||||    
T  23067664 catatgtgtaggcctttgtaccttgccgttttatg 23067630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 103 - 330
Target Start/End: Original strand, 42972141 - 42972367
Alignment:
Q  103 tttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtca 202  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||  ||| | |||||||||||| ||||||||||||||||||||||||||||    
T  42972141 tttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttatgcgacgttatttt-tctttcttgtttctctcaggtatttgatcggttcagattgtca 42972239  T
Q  203 gatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcata 302  Q
    ||||| ||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| |||||| |||||||||||||    
T  42972240 gatcaacttcgatccagtgcagatccaatcaatgactttgacgtcatccacgttgcagatccggagacatgactattccaaagatttaaatatagtcata 42972339  T
Q  303 tgtataggcatttgtactttgccgtttt 330  Q
    ||| ||||||||||||| ||||||||||    
T  42972340 tgtgtaggcatttgtaccttgccgtttt 42972367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 9474554 - 9474321
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||| ||||||||||    
T  9474554 gtgatttcgtcgtattcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctcttaggtatttgattggttcagatt 9474456  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||| |||||||| |||||||| | ||| |||||||||    
T  9474455 gtctgatcaacttcgatccagtgtagatccaatcaatgactttgacgtcatccacattgcagatcctgagacatggttattccggatatttaaatatagt 9474356  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||||||||||||||||| |||||||    
T  9474355 catatgtgtaggcatttgtactttgccattttatg 9474321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 9661952 - 9662185
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  9661952 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgatcagttcagatt 9662050  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    || |||||||||||||||||||| |||| ||||||||||||||| | ||||||||| |||||||||||| ||||| |||||| | ||||| |||||||||    
T  9662051 gttagatcagcttcgatccagtgcagatgcaatcaatgactttggcgtcatccacgttgcagatccggatacatggttattctggagatttaaatatagt 9662150  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||| || ||||||||||||||||||||    
T  9662151 catatgtgtagacaattgtactttgccgttttatg 9662185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 99 - 335
Target Start/End: Original strand, 32189079 - 32189313
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||| ||||||||||    
T  32189079 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtgtttgattggttcagatt 32189177  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||||||||||||| |||||| |||||||||||||||||||| | ||||||||| |||||||| |||||| || ||| |||| ||||| ||||||| |    
T  32189178 gtcagatcagcttcga-ccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatctggagacgtgtttactccggagatttaaatataat 32189276  T
Q  299 catatgtataggcatttgtactttgccgttttatgat 335  Q
    ||||||| |||||||||||||||||||||||||||||    
T  32189277 catatgtgtaggcatttgtactttgccgttttatgat 32189313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 104 - 333
Target Start/End: Complemental strand, 30470132 - 30469905
Alignment:
Q  104 ttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcag 203  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||| |||||| |||||||| |||||||||||||    
T  30470132 ttcgtcgtcttcgtgcgacgttggtt-gtttgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtgtttgatcgcttcagattgtcag 30470035  T
Q  204 atcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatat 303  Q
    ||||||||||||| |||| |||||||||||||||||||| | ||||||||| |||||||||||| ||||| |||||||| ||||| ||||||||||||||    
T  30470034 atcagcttcgatctagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatat 30469935  T
Q  304 gtataggcatttgtactttgccgttttatg 333  Q
    || |||||||||||||||| ||||||||||    
T  30469934 gtgtaggcatttgtacttttccgttttatg 30469905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 34115666 - 34115438
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||      |||| |||||||| | ||||||||||||||||||||||    
T  34115666 gtgatttcgtcgtcttcgtgcgacgttggtatgttcgttgtctttgtgcgacgttt------tttttttgtttctcttaggtatttgatcggttcagatt 34115573  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||||||||||| |||||||||||||||||||||||| |||| | ||||| ||| |||||||||||||||||| |||||||| ||||| |||||||||    
T  34115572 gtcagatcagcttcaatccagtgtagatccaatcaatgattttggcgtcatcaacgttgcagatccggagacatggttattccggagatttaaatatagt 34115473  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||||||||||||||||||||||||||    
T  34115472 catatgtgtaggcatttgtactttgccgttttatg 34115438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 20961548 - 20961780
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||  ||||||||||||||||||||| ||||||| ||||||| ||||||| |||| ||  |||||||||| ||||||||||||||| ||||||||    
T  20961548 gtgatttcatcgtcttcgtgcgacgttggtt-gttcgtcatctttgtacgacgttggttt-ttcgtcttgtttctctcaggtatttgatcgcttcagatt 20961645  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||| ||||||||||||| |||| ||||||||||||||||| ||||||||| ||||||| |||| |||||||||||||| ||||| ||||||| |    
T  20961646 gtcagatcaacttcgatccagtgcagattcaatcaatgactttgacgtcatccacgttgcagatacggaaacatgattattccggagatttaaatatatt 20961745  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||||||||||||||||||||||||||    
T  20961746 catatgtgtaggcatttgtactttgccgttttatg 20961780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 37869432 - 37869199
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | ||||||| ||||||||||||||||| || ||||||||||||||||  ||| |||||||||||||| | |||||||||||| |||||||||    
T  37869432 gtgattttgtcgtcttcttgcgacgttggtttgtttgttgtctttgtgcgacgtta-tttatttttcttgtttctctaaggtatttgatcagttcagatt 37869334  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| | |||||||||||||||||| | ||||||||| |||||||||| ||||||| |||| ||| ||||| |||||||||    
T  37869333 gtcagatcagcttcgatccagtgcaaatccaatcaatgactttggcgtcatccacgttgcagatccgaagacatggttatcccggagatttaaatatagt 37869234  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||||||||||||||| |||||||||    
T  37869233 catatgtgtaggcatttgtactttgtcgttttatg 37869199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 31601373 - 31601138
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtat--ttgatcggttcaga 196  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||| || |||| | |||||||||||| ||||||||  ||||| ||||||||    
T  31601373 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacatt-gtttatctttcttgtttctctcaggtatatttgattggttcaga 31601275  T
Q  197 ttgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatata 296  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||| |||||| || |||||||| ||||| || ||||| |||||||    
T  31601274 ttgtcagatcaacttcgatccagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagagacatggttatttcggagatttaaatata 31601175  T
Q  297 gtcatatgtataggcatttgtactttgccgttttatg 333  Q
    || |||||| ||||||||||||| |||||| ||||||    
T  31601174 gttatatgtgtaggcatttgtaccttgccgctttatg 31601138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 99 - 329
Target Start/End: Original strand, 41486674 - 41486903
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | |||||| |||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||| |||||||||||||||||||    
T  41486674 gtgattttgtcgtctttgtgcgatgttggtttgttcgtcgtctttgtgcaacgtt-gtttgtttttcttgtttctctcagctatttgatcggttcagatt 41486772  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||| || ||||||||| ||||| | |||||||||||||||||| | ||||||||| |||||||| ||||||||| |||||||| ||||  |||| ||||    
T  41486773 gtcaaattagcttcgatacagtgcaaatccaatcaatgactttggcgtcatccacgttgcagatctggagacatggttattccggagatctaaatctagt 41486872  T
Q  299 catatgtataggcatttgtactttgccgttt 329  Q
    ||||||| ||||||||||||||||| |||||    
T  41486873 catatgtgtaggcatttgtactttgtcgttt 41486903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 50003191 - 50002958
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||||||||  ||||||||||||||| | |||||| |||||||||||| ||||||||| |||  || ||||||    
T  50003191 gtgatttcgtcgtcttcgtgcgacgttggtttgttcaccgtctttgtgcgacgat-gtttgtctttcttgtttctctcaggtattagattagtccagatt 50003093  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| | || ||||||| ||||||| | | ||| ||| | ||||| | |||||||| |||||||||||||| |||||||||    
T  50003092 gtcagatcagcttcgatccagtgcaaattcaatcaacgactttggcgttatcaacgttacagattcagagacatggttattccgaagatttaaatatagt 50002993  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||  | |||||||||| ||||||||||||||||    
T  50002992 catagttgtaggcatttgcactttgccgttttatg 50002958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 132 - 333
Target Start/End: Complemental strand, 54420723 - 54420522
Alignment:
Q  132 ttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagctt-cgatccagtgtagatccaa 230  Q
    |||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||| ||||||||||||||||| ||| ||||| |||| |||| |||    
T  54420723 ttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctgaggtatttgatcgcttcagattgtcagatcaactttcgatctagtgcagattcaa 54420625  T
Q  231 tcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttt 330  Q
    |||||||||||||| ||||||||| |||||||||||| |||||  ||||||| ||||| |||||||||||||||| || ||||||||||||||  |||||    
T  54420624 tcaatgactttgacgtcatccacgttgcagatccggaaacatggctattccggagatttaaatatagtcatatgtgtaagcatttgtactttgatgtttt 54420525  T
Q  331 atg 333  Q
    |||    
T  54420524 atg 54420522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 99 - 332
Target Start/End: Complemental strand, 46728935 - 46728703
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| ||||||| ||| |||||||||||||||||| ||||||| |||||  |||||||||||  ||||||||||| ||||||||||||    
T  46728935 gtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtacgacgtt-gtttgcctttcttgtttcgttcaggtatttgttcggttcagatt 46728837  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||  || || ||| |||| || ||||||||||  ||||||  ||| | |||||||||    
T  46728836 gtcagatcagcttcgatccagtgcagatcaaatcaatgactttgaagtcgtcaacgttgcaaattcggagacatgggtattccagagacttaaatatagt 46728737  T
Q  299 catatgtataggcatttgtactttgccgttttat 332  Q
    ||||||| ||||| || |||||||||||||||||    
T  46728736 catatgtgtaggctttagtactttgccgttttat 46728703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 53903713 - 53903910
Alignment:
Q  132 ttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaat 231  Q
    ||||||||||| || ||||||| ||||||||||| ||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  53903713 ttcgtcgtcttcgtacgacgtt-gtttgtttttcctgtttctctcaggtatttgatcgcttcagattgccagatcagcttcgatccagtgcagatccaat 53903811  T
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    ||||||||||| | ||||||||| | |||||| ||| ||||  |||||||| | ||| |||||||||||||||| ||||||||||||||||| |||||||    
T  53903812 caatgactttggcgtcatccacgttacagatctggaaacat--ttattccggatatttaaatatagtcatatgtgtaggcatttgtactttgtcgtttta 53903909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 140 - 319
Target Start/End: Complemental strand, 52555714 - 52555536
Alignment:
Q  140 ctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgact 239  Q
    |||||| ||||||| |||||| |||||||||||| | |||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  52555714 ctttgtacgacgtt-gtttgtctttcttgtttctcttaggtatttaatcggttcagattgtcaaatcagcttcgatccagtgcagatccaatcaatgact 52555616  T
Q  240 ttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtac 319  Q
    ||| | ||||||| | ||||||| ||||||||||| ||||||| ||||| |||||||||||||||| |||||||||||||    
T  52555615 ttggcgtcatccatgttgcagattcggagacatgactattccggagatttaaatatagtcatatgtgtaggcatttgtac 52555536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 43156875 - 43157109
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| |||| |||||| ||||||||||| |||||||||||||| |||||| |||||||||||  ||||||||||| ||||||||||||    
T  43156875 gtgatttcgtcgtcttagtgcaacgttgttttgttcgtcgactttgtgcgacgtt-gtttgtctttcttgtttcattcaggtatttgttcggttcagatt 43156973  T
Q  199 gtcagatcagcttcgatccagtg-tagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatag 297  Q
    || |||||||||||||| |||||  ||||| ||||||||||||||   || || ||| |||||||||||| |||||| ||||||  ||| | ||||||||    
T  43156974 gttagatcagcttcgattcagtgcaagatcaaatcaatgactttggagtcctcaacgttgcagatccggacacatgagtattccatagacttaaatatag 43157073  T
Q  298 tcatatgtataggcatttgtactttgccgttttatg 333  Q
    |||||||| ||||| || |||||||| |||||||||    
T  43157074 tcatatgtgtaggctttagtactttgtcgttttatg 43157109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 132 - 333
Target Start/End: Original strand, 9549571 - 9549771
Alignment:
Q  132 ttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaat 231  Q
    ||||||||| | |||| ||||| |||||| |||||||||||| | |||||||||||||| || |||||||| ||||| ||||||| |||  |||||||||    
T  9549571 ttcgtcgtcgtcgtgctacgttggtttgtctttcttgtttctctaaggtatttgatcggctc-gattgtcatatcagtttcgatctagtacagatccaat 9549669  T
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    |||| ||||||| ||||| |||| ||||||||  ||||||||||||||| | ||||| |||||||||||||||||||| |||||||||||||||||||||    
T  9549670 caattactttgaaatcattcacgttgcagatcaagagacatgattattctggagatttaaatatagtcatatgtatagacatttgtactttgccgtttta 9549769  T
Q  332 tg 333  Q
    ||    
T  9549770 tg 9549771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 116 - 333
Target Start/End: Original strand, 14346547 - 14346763
Alignment:
Q  116 gtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgat 215  Q
    ||||||||||| ||||||||||||| |||||||||||| |||||| |||||||||||  ||||||||||| ||| |||||||||||||||||||||||||    
T  14346547 gtgcgacgttgttttgttcgtcgtcgttgtgcgacgtt-gtttgtctttcttgtttcgttcaggtatttgctcgattcagattgtcagatcagcttcgat 14346645  T
Q  216 ccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcattt 315  Q
    |||||| | ||| ||||||||||||||   || || ||| ||||||||||||| ||||  |||||   ||| | |||||||||||||||| ||||| ||     
T  14346646 ccagtgcaaatcaaatcaatgactttggagtcgtcaacgttgcagatccggagccatgtgtattctagagacttaaatatagtcatatgtgtaggcttta 14346745  T
Q  316 gtactttgccgttttatg 333  Q
    ||||||||||||||||||    
T  14346746 gtactttgccgttttatg 14346763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 128 - 333
Target Start/End: Complemental strand, 29474314 - 29474110
Alignment:
Q  128 tttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatc 227  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||  ||||||||||| |||||||||||||||||| || ||||||||||||| |||||    
T  29474314 tttgttcgtcgtctttgtgcgacgtt-gtttgcttttcttgtttcgttcaggtatttgttcggttcagattgtcagaccatcttcgatccagtgcagatc 29474216  T
Q  228 caatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgt 327  Q
     ||||||||||||||   || || ||| ||||||||||||||||||  ||||||| ||  | |||||||||||||||| ||| | || ||||||||||||    
T  29474215 aaatcaatgactttggagtcgtcaacgttgcagatccggagacatgggtattccggaggcttaaatatagtcatatgtgtagtctttagtactttgccgt 29474116  T
Q  328 tttatg 333  Q
    ||||||    
T  29474115 tttatg 29474110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 99 - 329
Target Start/End: Complemental strand, 15729996 - 15729767
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| ||||||| ||| |||||||||||||||||||||||||| |||||  |||||||||||  ||||||||||| || |||||||||    
T  15729996 gtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgtt-gtttgcctttcttgtttcgttcaggtatttgttcagttcagatt 15729898  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||| ||||||||||||| ||||| ||||||||| ||||   || || | | ||||||| |||||||||   |||| || ||| | |||||||||    
T  15729897 gtcagatcaacttcgatccagtgcagatcaaatcaatgattttggagtcgtcaatgttgcagattcggagacataggtatttcggagacttaaatatagt 15729798  T
Q  299 catatgtataggcatttgtactttgccgttt 329  Q
    ||||||| ||||| || ||||||||||||||    
T  15729797 catatgtgtaggctttagtactttgccgttt 15729767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 38434698 - 38434930
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| ||||||||||| |||||||||||||||||| ||||||| |||||| |||||||||||  ||||||||||| ||  ||||||||    
T  38434698 gtgatttcgtcgtcttagtgcgacgttgttttgttcgtcgtctttgtccgacgtt-gtttgtctttcttgtttcgttcaggtatttgttcaattcagatt 38434796  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
       |||||||||||||||||||| ||||  ||||||||||||||   || || ||| ||||||||||| ||||||  ||||||| ||| | |||||||||    
T  38434797 actagatcagcttcgatccagtgcagataaaatcaatgactttggagtcgtcaacgttgcagatccgg-gacatgggtattccggagacttaaatatagt 38434895  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||| || |||||||| | |||||||    
T  38434896 catatgtgtaggctttagtactttgtcattttatg 38434930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 44375279 - 44375057
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||  ||||| ||| || ||||| |||| ||||| || ||||||||||    
T  44375279 gtgatttcgtcgtcttcgtgcgacgttcgtttgttcgtcgtctgtgtgcgacgtta-tttgtcttttttatttctctcagatatttaattggttcagatt 44375181  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    || |||||||| ||||||||           ||||||||||||| | |||| |||| |||||||||||||||||| |||| ||| ||||| |||||||||    
T  44375180 gttagatcagcctcgatcca-----------atcaatgactttggcgtcatacacgttgcagatccggagacatggttatcccggagattaaaatatagt 44375092  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||||||| ||| ||||| |||||||    
T  44375091 catatgtgtaggcatttctaccttgccattttatg 44375057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 121 - 333
Target Start/End: Complemental strand, 26576495 - 26576285
Alignment:
Q  121 acgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagt 220  Q
    |||||| |||||| |||||| |||||||||  |||||||| |||| ||||||  ||||||||||| ||| |||||||||||| ||||||||||||| |||    
T  26576495 acgttgttttgtttgtcgtcgttgtgcgac--ttgtttgtctttcctgtttcgttcaggtatttgttcgattcagattgtcaaatcagcttcgatctagt 26576398  T
Q  221 gtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtact 320  Q
    | ||||| ||||||||||||||   || || ||| |||||||||| |||||||| ||||||| ||| | |||||||||||||||| ||||| || |||||    
T  26576397 gcagatcaaatcaatgactttggagtcgtcaacgatgcagatccgaagacatgagtattccggagactcaaatatagtcatatgtgtaggctttagtact 26576298  T
Q  321 ttgccgttttatg 333  Q
    || |||| |||||    
T  26576297 ttaccgtattatg 26576285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 51646192 - 51646429
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggttt-gttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagat 197  Q
    ||||||||| ||||||  |||||| || |||| ||||||||||||||||||| ||| |||||| |||||||||||  ||| ||||||| |||||||||||    
T  51646192 gtgatttcgtcgtcttaatgcgacatttgttttgttcgtcgtctttgtgcgatgtt-gtttgtctttcttgtttcgctcaagtatttgttcggttcagat 51646290  T
Q  198 tgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccac---gctgcagatccggagacatgattattccgaagattgaaata 294  Q
    | |||||||||||||||||||||| ||||| |||| |||||||||  ||| || ||   || ||||||||| |||||||  ||||||  ||| | |||||    
T  51646291 tatcagatcagcttcgatccagtgcagatcaaatcgatgactttggaatcgtcaacgttgcagcagatccgaagacatgggtattccagagacttaaata 51646390  T
Q  295 tagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||||||| ||||| ||  |||||||||||||||||    
T  51646391 tagtcatatgtgtaggctttaatactttgccgttttatg 51646429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 99 - 286
Target Start/End: Original strand, 12519755 - 12519941
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| |||||||||||||||||||||||| ||||||||| ||| | |||| |||||||| ||  ||||||||||| | |||||| |||    
T  12519755 gtgatttcgtcgtcttagtgcgacgttggtttgttcgtcgtatttgtgcgaagtt-gattgtctttcttgtatcgttcaggtatttgtttggttcaaatt 12519853  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaaga 286  Q
    ||||||||| |||||||| |||| |||||||||||||||| ||  | || |||| | ||||||||||||||||||| ||||| |||||    
T  12519854 gtcagatcaacttcgatctagtgcagatccaatcaatgacattagcgtcgtccatgttgcagatccggagacatgagtattctgaaga 12519941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 102 - 333
Target Start/End: Complemental strand, 29589373 - 29589143
Alignment:
Q  102 atttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtc 201  Q
    |||||| |||||| ||||||||||| |||||| || ||||||||||||| || ||||||  ||||||||||  ||||||||||| ||  ||||||||||     
T  29589373 atttcgtcgtcttagtgcgacgttgttttgtttgttgtctttgtgcgacctt-gtttgtcattcttgtttcgttcaggtatttgttcatttcagattgtt 29589275  T
Q  202 agatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcat 301  Q
     ||||| ||||||||||||| ||||| | ||||||||||||   || || ||| ||||||||||||||||||| ||||| | ||| | ||||||||||||    
T  29589274 tgatcaacttcgatccagtgcagatcaactcaatgactttggagtcttcaacgttgcagatccggagacatgagtattctggagacttaaatatagtcat 29589175  T
Q  302 atgtataggcatttgtactttgccgttttatg 333  Q
    |||| || || || |||||||| |||||||||    
T  29589174 atgtgtatgctttagtactttgtcgttttatg 29589143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 109 - 332
Target Start/End: Complemental strand, 29577127 - 29576904
Alignment:
Q  109 cgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcag 208  Q
    |||||| |||| |||| | |||||||| |||||||||||| |||| |||||| ||| |||||||  ||||||||||| |||||||||||||||| ||| |    
T  29577127 cgtcttagtgcaacgtagttttgttcgacgtctttgtgcggcgtt-gtttgtcttttttgtttcgttcaggtatttgttcggttcagattgtcatatcgg 29577029  T
Q  209 cttcgatccagtgtagatccaatcaa-tgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtat 307  Q
    ||| ||||||| | | |||||||||| ||| |||| | || || ||| |||||||||| |||||||| ||||||| ||| |  ||||||||||||||| |    
T  29577028 cttagatccagcgcatatccaatcaaatgattttggcgtcgtcaacgttgcagatccgaagacatgaatattccggagacttgaatatagtcatatgtgt 29576929  T
Q  308 aggcatttgtactttgccgttttat 332  Q
    |||| ||||||| ||||||||||||    
T  29576928 aggcttttgtaccttgccgttttat 29576904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 46775871 - 46775640
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| ||| ||||||| ||  |||||||| |||||||| |||| |||||| ||| ||| |||  ||| ||||||| ||| ||||||||    
T  46775871 gtgatttcgtcgtcttagtgtgacgttgtttaattcgtcgt-tttgtgcggcgtt-gtttgtcttttttgcttcgttcatgtatttgttcgattcagatt 46775774  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||||||||||||||| |||| ||||||||||||||| |||||| ||||| ||| ||||||| |||| |||| | ||||||| ||| |  |||||| |    
T  46775773 gtcagatcagcttcgatctagtgcagatccaatcaatgaatttgacgtcatcaacgttgcagatacggatacat-agtattccggagacttgaatataat 46775675  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||| ||||| ||||| |||||||||    
T  46775674 catatgtgtaggcttttgtgctttgtcgttttatg 46775640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 99 - 332
Target Start/End: Original strand, 1125040 - 1125272
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||| | |||||| |||| |||||  ||||||||| ||||||||| | |||| |||||||||||  ||||||||||| | |||||| |||    
T  1125040 gtgatttcgtcgtcatagtgcgatgttgttttgtctgtcgtctttttgcgacgtt-gattgtctttcttgtttcgttcaggtatttgtttggttcaaatt 1125138  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| ||||| ||||||||| |||||  || || ||| || |||||| ||||||||| | ||||| ||| | | |||||||    
T  1125139 gtcagatcagcttcgatccagtgcagatcaaatcaatgattttgaagtcgtcaacgttgaagatccagagacatgaatgttccgtagacttacatatagt 1125238  T
Q  299 catatgtataggcatttgtactttgccgttttat 332  Q
    ||||||| || || ||  ||||||| ||||||||    
T  1125239 catatgtgtatgctttaatactttgtcgttttat 1125272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 103 - 333
Target Start/End: Original strand, 16991975 - 16992204
Alignment:
Q  103 tttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtca 202  Q
    |||| |||| || ||| ||||||| |||||| ||||||||||||||||||| |||||  ||||||||||   |||||||||   |||||||||||| |||    
T  16991975 tttccccgttttagtgtgacgttgttttgtttgtcgtctttgtgcgacgtt-gtttgcctttcttgttttgttcaggtattctttcggttcagattatca 16992073  T
Q  203 gatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcata 302  Q
    ||||||||||||||||||| | ||| |||||||||||||||  || |  ||  ||||||||||||||||||  ||||||  ||| | |||||| ||||||    
T  16992074 gatcagcttcgatccagtgcatatcaaatcaatgactttgaagtcgtaaacattgcagatccggagacatgggtattccagagacttaaatattgtcata 16992173  T
Q  303 tgtataggcatttgtactttgccgttttatg 333  Q
    ||| ||||| ||  |||||||| ||||||||    
T  16992174 tgtgtaggctttaatactttgctgttttatg 16992204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 104 - 271
Target Start/End: Complemental strand, 30416603 - 30416437
Alignment:
Q  104 ttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcag 203  Q
    |||| |||||| ||||||||||| ||||||||||||||||| |||||||| |||| | ||| ||||||   |  |||||||| |||||||||||||||||    
T  30416603 ttcgtcgtctttgtgcgacgttgttttgttcgtcgtctttgcgcgacgtt-gtttctcttttttgttttgtttgggtatttgttcggttcagattgtcag 30416505  T
Q  204 atcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagaca 271  Q
    |||||||| ||||||||| ||||| ||||||||||||||   ||||| ||| ||||||||| ||||||    
T  30416504 atcagctttgatccagtgcagatcaaatcaatgactttggagtcatcaacgttgcagatccagagaca 30416437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 4959588 - 4959356
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| || |||| ||| ||||||||| || ||||||||||||| |||||| |||||||||||  ||  ||||||| |||||||  | |    
T  4959588 gtgatttcgtcgtcttagtacgacattgttttgttcgttgtttttgtgcgacgtt-gtttgtctttcttgtttcgttcctgtatttgttcggttcgaaat 4959490  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||| |||  |||| |||||||||||||||||||| | || ||  || ||||||||||||||||||  ||||||| ||| |  ||||||||    
T  4959489 gtcagatcagcttagatt-agtgcagatccaatcaatgactttggcgtcgtcagcgttgcagatccggagacatgggtattccgtagacttgaatatagt 4959391  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    |||  || ||| | |||||||||||| ||||||||    
T  4959390 catgggtgtagacttttgtactttgcagttttatg 4959356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 116 - 273
Target Start/End: Original strand, 28990414 - 28990570
Alignment:
Q  116 gtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgat 215  Q
    ||||||||||||||||||||| |||||||||||  ||| || ||| |||||||||||  ||||| ||||| || |||||||||||||||| |||||||||    
T  28990414 gtgcgacgttggtttgttcgttgtctttgtgcggtgtt-gtctgtctttcttgtttcgttcaggcatttgttccgttcagattgtcagattagcttcgat 28990512  T
Q  216 ccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatg 273  Q
    | |||| | ||||||||||||| |||||| || |||||| |||||||| | |||||||    
T  28990513 ctagtgcatatccaatcaatgattttgacgtcgtccacgttgcagatctgaagacatg 28990570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 110 - 221
Target Start/End: Original strand, 40859784 - 40859894
Alignment:
Q  110 gtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagc 209  Q
    ||||| |||||||| || |||||||||||||||||||||||||| |||||| ||||||||||   || |||||||| |||||||||||||||||||||||    
T  40859784 gtctttgtgcgacgctgttttgttcgtcgtctttgtgcgacgtt-gtttgtctttcttgttttgttcgggtatttgttcggttcagattgtcagatcagc 40859882  T
Q  210 ttcgatccagtg 221  Q
    ||||||||||||    
T  40859883 ttcgatccagtg 40859894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 175 - 329
Target Start/End: Original strand, 23926215 - 23926369
Alignment:
Q  175 tcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatga 274  Q
    |||||| |||| |||||||| ||| ||| ||||||||||||  | || |||||||| ||||||||||| ||||||| ||| ||||||||| |||||||||    
T  23926215 tcaggtgtttgttcggttcaaattctcatatcagcttcgattaaatgcagatccaaccaatgactttggcatcatcaacgttgcagatccagagacatga 23926314  T
Q  275 ttattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttt 329  Q
     ||||||| |||||  ||||||||||||| | ||||| | |||||||||||||||    
T  23926315 ctattccggagattttaatatagtcatatttgtaggcttatgtactttgccgttt 23926369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 191 - 333
Target Start/End: Complemental strand, 33020851 - 33020709
Alignment:
Q  191 ttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattga 290  Q
    |||||||||||||||||| |||||||||||| | |||||| ||||||||||| | ||||| ||| || |||| ||||||||||||||||||| |||||      
T  33020851 ttcagattgtcagatcagtttcgatccagtgcaaatccaaccaatgactttggcgtcatcaacgttgtagattcggagacatgattattccggagatttt 33020752  T
Q  291 aatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||||||||| | ||||| | ||||||||| | |||||||    
T  33020751 aatatagtcatatttgtaggcttatgtactttgtcattttatg 33020709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 117 - 262
Target Start/End: Original strand, 3169543 - 3169687
Alignment:
Q  117 tgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatc 216  Q
    ||||| ||||| |||||||| ||||||||||| |||| |||||| |||||||||||  |||| |||||| |||||||| ||||||||||||||||| |||    
T  3169543 tgcgatgttgggttgttcgttgtctttgtgcggcgtt-gtttgtctttcttgtttcgttcagatatttgttcggttcaaattgtcagatcagcttcaatc 3169641  T
Q  217 cagtgtagatccaatcaatgactttgacatcatccacgctgcagat 262  Q
    ||||| |||| ||||||||||||||  | ||||||||  |||||||    
T  3169642 cagtgcagattcaatcaatgactttcgcgtcatccactttgcagat 3169687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 109 - 270
Target Start/End: Complemental strand, 7242774 - 7242614
Alignment:
Q  109 cgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcag 208  Q
    |||||| ||||||||| | |||||||||||||||||||||| ||| |||||| |||||| ||||  ||| ||||||| |||||||||||||||||| ||     
T  7242774 cgtcttagtgcgacgtcgatttgttcgtcgtctttgtgcgaagtt-gtttgtctttcttatttcgttcaagtatttgttcggttcagattgtcagaccaa 7242676  T
Q  209 cttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagac 270  Q
    ||| |||| ||   ||||||||| |||||||||| | || |||||| |||||||||||||||    
T  7242675 ctttgatctaggccagatccaataaatgactttggcgtcgtccacgttgcagatccggagac 7242614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 99 - 262
Target Start/End: Complemental strand, 6789891 - 6789729
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | |||||| ||||  |||| |||||||||||||||||||||| | || |||||| |||||||||||  | ||||||||| ||  |||||| |    
T  6789891 gtgattttgtcgtcttagtgcagcgtttgtttgttcgtcgtctttgtgcgccatt-gtttgtctttcttgtttcgttaaggtatttgttcaattcagaat 6789793  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagat 262  Q
    |||||||||||||||||||   | |||||||||||||||||||| ||||||||| | |||||||    
T  6789792 gtcagatcagcttcgatcctacgcagatccaatcaatgactttggcatcatccatgttgcagat 6789729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 6408542 - 6408777
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| ||||||||||| || ||||||||||||||||||||  |||||||| || ||||||||  | ||||| ||| || ||||| |||    
T  6408542 gtgatttcgacgtcttggtgcgacgttgtttggttcgtcgtctttgtgcgac-attgtttgtcttacttgtttcgtttaggtaattgttcagttcaaatt 6408640  T
Q  199 gtcagatcagcttcgatcca-gtgtagatccaatcaatgactttgaca-tcatccacgctgcagatccggagacatgattattccgaagattgaaatata 296  Q
    |||| ||||||||||||| | ||||||||| ||||||||| ||||  | |  || ||| | ||| || ||| |||||  ||||||| ||| | |||||||    
T  6408641 gtcaaatcagcttcgatctaggtgtagatcaaatcaatgagtttgggagttgtcaacgtttcaggtctggaaacatgggtattccggagacttaaatata 6408740  T
Q  297 gtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||||| ||| ||||| || ||||||||| ||||||||    
T  6408741 gtcatctgtgtaggctttggtactttgctgttttatg 6408777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 200 - 332
Target Start/End: Original strand, 11817255 - 11817387
Alignment:
Q  200 tcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtc 299  Q
    ||||||||||||||||| |||  |||||||| ||||||||||||| || || ||| ||||||||||||  ||||| ||||||| |||||  |||||||||    
T  11817255 tcagatcagcttcgatctagtacagatccaaccaatgactttgacgtcgtcaacgttgcagatccggaagcatgactattccggagattttaatatagtc 11817354  T
Q  300 atatgtataggcatttgtactttgccgttttat 332  Q
    |||| | ||||| | ||||||||||||||||||    
T  11817355 atatatgtaggcttatgtactttgccgttttat 11817387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 1657581 - 1657348
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| ||||||| ||| |||||||||| ||||| | |||| |   ||| | || |||||||   | ||||||||| ||| |||||||     
T  1657581 gtgatttcgtcgtcttagtgcgacattgttttgttcgtcatctttatacgacatca-tttatcttccttgttttgtttaggtatttgttcgattcagata 1657483  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||| ||||||||||||||| | ||| ||||||||||||||   || || ||| ||||||||||||||||||  ||||||  ||| | |||||||||    
T  1657482 gtcagattagcttcgatccagtgcaaatcaaatcaatgactttggagtcgtcaacgttgcagatccggagacatgggtattccagagacttaaatatagt 1657383  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||  |  ||| ||||||||||||||    
T  1657382 catatgtgtaggattcagtattttgccgttttatg 1657348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 272
Target Start/End: Original strand, 2945236 - 2945408
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||  |||| | ||||||||||||||||||| |||||| | |||| | || ||| || ||| |||||||  ||||||||||| ||||||||||||    
T  2945236 gtgatttcatcgtcatagtgcgacgttggtttgttcatcgtctgtatgcggcatt-gttagtgttttttgtttcgttcaggtatttgttcggttcagatt 2945334  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacat 272  Q
    |||||||||  |||||||||||| |||  ||||||||||||||| | || |  ||  |||||||||||||||||    
T  2945335 gtcagatcaatttcgatccagtgaagacacaatcaatgactttggcgtcgttaacattgcagatccggagacat 2945408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 180 - 333
Target Start/End: Original strand, 31311647 - 31311802
Alignment:
Q  180 tatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattatt 279  Q
    |||||| |||||||||||||||  |||| ||| ||||||||  ||||| ||| |||||||||| | ||||||||| |||||||||||||||||   ||||    
T  31311647 tatttgttcggttcagattgtcctatcaactttgatccagtacagatcaaattaatgactttgtcgtcatccacgttgcagatccggagacatatgtatt 31311746  T
Q  280 ccgaaga-ttgaa-atatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
     || ||| ||||| |||||||||| ||| ||||| ||||||||||| |||||||||    
T  31311747 tcggagacttgaatatatagtcatgtgtgtaggcttttgtactttgtcgttttatg 31311802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 123 - 262
Target Start/End: Complemental strand, 1645546 - 1645408
Alignment:
Q  123 gttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgt 222  Q
    ||||| |||||||| ||||||||||| |||| |||||| |||||||||||  |||| |||||| | |||||| ||||||||||||| ||| ||| || |     
T  1645546 gttgggttgttcgttgtctttgtgcggcgtt-gtttgtctttcttgtttcgttcagatatttgtttggttcaaattgtcagatcagtttcaatctagggc 1645448  T
Q  223 agatccaatcaatgactttgacatcatccacgctgcagat 262  Q
    |||| |||||||||||||| || ||||||||  |||||||    
T  1645447 agattcaatcaatgactttcacgtcatccactttgcagat 1645408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 44021509 - 44021422
Alignment:
Q  187 tcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatga 274  Q
    |||||||||||||||||| || ||| ||| ||||| ||||||||| |||||||||||| || |||||| |||||||||||||||||||    
T  44021509 tcggttcagattgtcagaacaactttgattcagtgcagatccaattaatgactttgacgtcgtccacgttgcagatccggagacatga 44021422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 242
Target Start/End: Complemental strand, 46386779 - 46386647
Alignment:
Q  109 cgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcag 208  Q
    |||||| |||| || ||| |||||||| ||| |||||||| | || ||||||||||||||||||  | ||||||||| || ||||| ||||||| ||||     
T  46386779 cgtcttagtgcaactttgttttgttcgccgtgtttgtgcgtcatt-gtttgtttttcttgtttcgtttaggtatttgttctgttcaaattgtcatatcaa 46386681  T
Q  209 cttcgatccagtgtagatccaatcaatgactttg 242  Q
    |||||||| ||||  |||||||||||||||||||    
T  46386680 cttcgatctagtgctgatccaatcaatgactttg 46386647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 311
Target Start/End: Complemental strand, 38170174 - 38169964
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||  |||||| |||| |  ||| |||||| ||||||||  | ||||||| |||||| |||||||||| | ||||||||||  || |||||||||    
T  38170174 gtgatttcatcgtcttagtgcaatattgttttgtttgtcgtcttcttacgacgtt-gtttgtctttcttgtttgt-tcaggtatttattccgttcagatt 38170077  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||| |||| ||| |||| ||||  ||||||||||||||||||| | ||||| ||| |||| |||| ||  ||||| ||||||| ||| |  ||||||||    
T  38170076 gtcatatcaactttgatctagtgctgatccaatcaatgactttggcgtcatcaacgttgcaaatcctgatgcatgagtattccggagacttgaatatagt 38169977  T
Q  299 catatgtataggc 311  Q
    |||| || |||||    
T  38169976 catacgtgtaggc 38169964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 303
Target Start/End: Complemental strand, 35658527 - 35658343
Alignment:
Q  117 tgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgt-ttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgat 215  Q
    |||||||||| ||||||   ||||||||||||||||| |||||| ||||||  ||| | || ||| |||| || ||| ||||||||||||||| || |||    
T  35658527 tgcgacgttgttttgtttaccgtctttgtgcgacgtt-gtttgtcttttctcttttgt-tc-ggtgtttgttcagtttagattgtcagatcagttttgat 35658431  T
Q  216 ccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatat 303  Q
    | |||| |||| ||| ||||||||||||| ||||| ||| ||||||||||||| ||||  ||||||  |||||  |||||||||||||    
T  35658430 caagtgcagattcaaccaatgactttgacgtcatcaacgttgcagatccggaggcatgtctattccagagattttaatatagtcatat 35658343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 192 - 274
Target Start/End: Original strand, 5388706 - 5388788
Alignment:
Q  192 tcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatga 274  Q
    ||||||||||||||||| |||||||||||| | ||| || ||||||||||||| ||||| ||| || ||||||||||||||||    
T  5388706 tcagattgtcagatcagattcgatccagtgcaaatcgaaccaatgactttgacgtcatcaacgttgtagatccggagacatga 5388788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 99 - 272
Target Start/End: Complemental strand, 4622724 - 4622552
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| ||||||||| ||  |||| |||||||||||| | || | |||||| ||||||||||   ||||||||| | ||||||||||||    
T  4622724 gtgatttcgtcgtcttagtgcgacgtgggagtgtttgtcgtctttgtgtggcgct-gtttgtctttcttgttttgctcaggtattggttcggttcagatt 4622626  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacat 272  Q
    |||| ||  | ||||||||| || | || ||||||| ||||||||  || |||||| ||| ||||| |||||||    
T  4622625 gtcatattggtttcgatccaatgcaaattcaatcaacgactttgatgtcctccacgttgctgatccagagacat 4622552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 303
Target Start/End: Original strand, 29257342 - 29257527
Alignment:
Q  117 tgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgt-ttctatcaggtatttgatcggttcagattgtcagatcagcttcgat 215  Q
    |||||||||| |||||| ||||||||||||| ||||| |||||| |||  ||| || || ||| | |||| || |||||||||||||||||| ||| |||    
T  29257342 tgcgacgttgttttgttagtcgtctttgtgcaacgtt-gtttgtattttctgtcttgtaacag-tgtttgttcagttcagattgtcagatcaactttgat 29257439  T
Q  216 ccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatat 303  Q
     ||||  | ||||||||||||||||||   || || ||| ||||||| ||||||||||  ||||||||| | |  |||||||||||||    
T  29257440 acagtacaaatccaatcaatgactttggtgtcgtcaacgttgcagatacggagacatgtgtattccgaatacttgaatatagtcatat 29257527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 333
Target Start/End: Complemental strand, 6082315 - 6082213
Alignment:
Q  231 tcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttt 330  Q
    ||||||| |||| |||| || ||| |||||||||||| |||||| ||||| | ||| |  ||||||||||||| | ||||||| ||||||||||||||||    
T  6082315 tcaatgattttggcatcgtcaacgttgcagatccggaaacatgagtattctggagacttgaatatagtcatatttgtaggcatatgtactttgccgtttt 6082216  T
Q  331 atg 333  Q
    |||    
T  6082215 atg 6082213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 153
Target Start/End: Complemental strand, 30416636 - 30416582
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt 153  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||    
T  30416636 gtgatttcgctgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgtt 30416582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 232 - 333
Target Start/End: Complemental strand, 7083696 - 7083595
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    |||||||||||   || || ||| |||||||| |||||||||| ||||||| |||   |||||||||||||| |||||||||  ||||||||||||||||    
T  7083696 caatgactttggtgtcgtcaacgttgcagatctggagacatgagtattccggagacataaatatagtcatatttataggcataggtactttgccgtttta 7083597  T
Q  332 tg 333  Q
    ||    
T  7083596 tg 7083595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 232 - 333
Target Start/End: Original strand, 51152361 - 51152462
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    ||||||||||| |||| || ||| |||||||||||||| |||| ||||||| |||    ||||||||||||| | ||||||  |||||||||||||||||    
T  51152361 caatgactttggcatcgtcaacgttgcagatccggagatatgagtattccggagacatgaatatagtcatatttgtaggcaaatgtactttgccgtttta 51152460  T
Q  332 tg 333  Q
    ||    
T  51152461 tg 51152462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 40859745 - 40859797
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacg 151  Q
    |||||||||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  40859745 gtgatttcgccgtcttagtgcgacgttgttttgttcgttgtctttgtgcgacg 40859797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 333
Target Start/End: Complemental strand, 23002757 - 23002714
Alignment:
Q  290 aaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  23002757 aaatatagtcatatgtgtaggcatttgtactttgccgttttatg 23002714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 282
Target Start/End: Complemental strand, 38546005 - 38545918
Alignment:
Q  195 gattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccg 282  Q
    ||||||||||||||||| |||| |||| | || ||||||||||||||  | ||||| ||| ||||||||||||||||||  |||||||    
T  38546005 gattgtcagatcagcttagatcaagtgcaaattcaatcaatgacttttgcgtcatcaacgttgcagatccggagacatggatattccg 38545918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 9781748 - 9781679
Alignment:
Q  175 tcaggtatttgatcggttcagattgtcagatcagcttcgatcca-gtgtagatccaatcaatgactttga 243  Q
    ||||||||||| |||||||||||||||| || |||||||||||| |||||||| |||| | |||||||||    
T  9781748 tcaggtatttgttcggttcagattgtcatattagcttcgatccaggtgtagatacaattattgactttga 9781679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 303
Target Start/End: Original strand, 31522183 - 31522254
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatat 303  Q
    ||||||||||| | ||||| ||| ||||||||||||||||||| |||||||||||    |||||||||||||    
T  31522183 caatgactttggcgtcatcaacgttgcagatccggagacatgagtattccgaagacatgaatatagtcatat 31522254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 303
Target Start/End: Complemental strand, 32616743 - 32616672
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatat 303  Q
    ||||||||||| |||| || ||| ||||||||||||| |||||||||||||||||    |||||||||||||    
T  32616743 caatgactttggcatcgtcaacgttgcagatccggagtcatgattattccgaagacatgaatatagtcatat 32616672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 335
Target Start/End: Complemental strand, 50981605 - 50981494
Alignment:
Q  224 gatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttg 323  Q
    ||||||| ||||||||||| | ||||| ||| || |||||| ||| |||| |||||||  |||||  ||||||||||||| | ||||| | |||||||||    
T  50981605 gatccaaccaatgactttggcgtcatcaacgttgtagatccagaggcatggttattccagagattttaatatagtcatatttgtaggcttatgtactttg 50981506  T
Q  324 ccgttttatgat 335  Q
      ||||||||||    
T  50981505 ttgttttatgat 50981494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 333
Target Start/End: Complemental strand, 477872 - 477795
Alignment:
Q  256 tgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||||||||||||||| |||||||||||    ||||||||||||| | ||||| |  |||||||| |||||||||    
T  477872 tgcagatccggagacatgagtattccgaagaaatgaatatagtcatatttgtaggcgtaggtactttgacgttttatg 477795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 333
Target Start/End: Complemental strand, 626410 - 626333
Alignment:
Q  256 tgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    |||||||| | |||||||| ||||||| |||   |||||||||||||| | |||||||  ||||||||||||||||||    
T  626410 tgcagatctgaagacatgagtattccggagacataaatatagtcatatttgtaggcatgggtactttgccgttttatg 626333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 17219943 - 17219988
Alignment:
Q  191 ttcagattgtcagatcagcttcgatccagtgtagatccaatcaatg 236  Q
    |||||||||| |||||| |||||||| |||||||||||||||||||    
T  17219943 ttcagattgttagatcaacttcgatcaagtgtagatccaatcaatg 17219988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 333
Target Start/End: Original strand, 22757331 - 22757432
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    ||||||||||| | || || ||| |||| |||||||||||||| ||||||| |||    ||||||||||||| | |||||||  |||||| |||||||||    
T  22757331 caatgactttggcgtcgtcaacgttgcaaatccggagacatgagtattccggagacatgaatatagtcatatttgtaggcataggtacttagccgtttta 22757430  T
Q  332 tg 333  Q
    ||    
T  22757431 tg 22757432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 313
Target Start/End: Original strand, 5814575 - 5814658
Alignment:
Q  230 atcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcat 313  Q
    ||||||||||||| | ||||| ||| ||||||||| ||||||||| ||||| | ||| |  ||||||||||||| | |||||||    
T  5814575 atcaatgactttggcgtcatcaacgttgcagatccagagacatgagtattctggagacttgaatatagtcatatttgtaggcat 5814658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 303
Target Start/End: Original strand, 30202275 - 30202346
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatat 303  Q
    ||||||||||| | || || ||| ||||||||||||||||||||||||| | ||| |  |||||||||||||    
T  30202275 caatgactttggcgtcgtcaacgttgcagatccggagacatgattattctggagacttgaatatagtcatat 30202346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 109 - 264
Target Start/End: Original strand, 47466014 - 47466167
Alignment:
Q  109 cgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcag 208  Q
    |||||| |||||||| || |||||| ||||||||||| || | || |||||||||||    || | ||||||||||| || | | ||||||| ||||||     
T  47466014 cgtcttagtgcgacgatgttttgtttgtcgtctttgtacggcatt-gtttgtttttcccccttgt-tcaggtatttgttcagataagattgttagatcaa 47466111  T
Q  209 cttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatcc 264  Q
     ||||||| |||  |||||||| ||||||||||| ||||| | ||| |||||||||    
T  47466112 attcgatcaagtccagatccaaccaatgactttggcatcaacaacgttgcagatcc 47466167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 274
Target Start/End: Original strand, 50801454 - 50801496
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatga 274  Q
    |||||||||||||||| || ||| |||||||||||||||||||    
T  50801454 caatgactttgacatcgtcaacgttgcagatccggagacatga 50801496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 333
Target Start/End: Original strand, 7060560 - 7060661
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    |||| |||||| | ||||| ||| ||||||||| ||||||||| ||||||| |||    ||||||||||||| | |||||||  |||||||  |||||||    
T  7060560 caattactttggcgtcatcaacgttgcagatccagagacatgagtattccggagacatgaatatagtcatatttgtaggcataggtactttatcgtttta 7060659  T
Q  332 tg 333  Q
    ||    
T  7060660 tg 7060661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 10665793 - 10665748
Alignment:
Q  191 ttcagattgtcagatcagcttcgatccagtgtagatccaatcaatg 236  Q
    ||||||||||||||||| |||||||| |||| | ||||||||||||    
T  10665793 ttcagattgtcagatcaacttcgatcaagtgcatatccaatcaatg 10665748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 10879938 - 10879893
Alignment:
Q  191 ttcagattgtcagatcagcttcgatccagtgtagatccaatcaatg 236  Q
    ||||||||||||||||| |||||||| |||| | ||||||||||||    
T  10879938 ttcagattgtcagatcaacttcgatcaagtgcatatccaatcaatg 10879893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 20887641 - 20887592
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattcc 281  Q
    |||||||||||||||| || ||| |||||||||||| |||||| ||||||    
T  20887641 caatgactttgacatcgtcaacgttgcagatccggaaacatgagtattcc 20887592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28588562 - 28588599
Alignment:
Q  1 agggtcaatttttggcacaaaatcacccctctaactcg 38  Q
    |||||||||||||| | |||||||||||||||||||||    
T  28588562 agggtcaatttttgacccaaaatcacccctctaactcg 28588599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 38546072 - 38546015
Alignment:
Q  100 tgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtt 157  Q
    |||||| | ||||||  ||||||||||  ||||||||||||||||||||| |||||||    
T  38546072 tgattttgtcgtcttaatgcgacgttgtgttgttcgtcgtctttgtgcgatgtttgtt 38546015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 20887569 - 20887529
Alignment:
Q  295 tagtcatatgtataggcatttgtactttgccgttttatgat 335  Q
    ||||||||| | ||||||| |||||||||||||||||||||    
T  20887569 tagtcatatttgtaggcatatgtactttgccgttttatgat 20887529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 167; Significance: 2e-89; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 43029782 - 43030015
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  43029782 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgatcagttcagatt 43029880  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| ||||||||||||||||||||   ||||||||| |||||||||||| ||||| |||||||| ||||| |||||||||    
T  43029881 gtcagatcagcttcgatccagtgcagatccaatcaatgactttggagtcatccacgttgcagatccggatacatggttattccggagatttaaatatagt 43029980  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||||| |||||||||||| |||||||    
T  43029981 catatgtgtaggcaattgtactttgccattttatg 43030015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 1165411 - 1165178
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  1165411 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcaacgtt-gtttgtttttcttgtttctctcaggtatttgatcagttcagatt 1165313  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    || |||||||||||||||||||| |||||||||||||||||||| | ||||||||| |||||||||||| ||||| |||||| | ||||| |||||||||    
T  1165312 gttagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggatacatggttattctggagatttaaatatagt 1165213  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||| || ||||||||||||||||||||    
T  1165212 catatgtgtagacaattgtactttgccgttttatg 1165178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 28995323 - 28995091
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||| ||||||||    
T  28995323 gtgattttgtcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctcttaggtatttgatcgcttcagatt 28995226  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||| |||||||||||||||||| |||||||||||||||||||| | ||||||||| |||||||||||| ||||| |||||||| ||||| |||||||||    
T  28995225 gtcatatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagt 28995126  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||||||||||||||||||||||||||    
T  28995125 catatgtgtaggcatttgtactttgccgttttatg 28995091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 99 - 332
Target Start/End: Original strand, 54240185 - 54240417
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  54240185 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgacgtctttgtgcgatgtt-gtttgtttttcttgtttctatcaggtatttgatcggttcagatt 54240283  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    || |||||||||||||| ||||| | |||||||||||||||||| |  |||||| | |||||||||||||||||||||||| |||||||| |||||||||    
T  54240284 gtgagatcagcttcgattcagtgcaaatccaatcaatgactttggcgacatccatgttgcagatccggagacatgattattacgaagatttaaatatagt 54240383  T
Q  299 catatgtataggcatttgtactttgccgttttat 332  Q
    ||||||| |||||||||||| |||| ||||||||    
T  54240384 catatgtgtaggcatttgtattttgtcgttttat 54240417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 3088678 - 3088446
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||| ||||||||    
T  3088678 gtgatttcgtcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttaatcgcttcagatt 3088581  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||| ||||||||||||| |||||||||||||||||||| | ||||||||| |||||||||||| ||||| |||||||| ||||| |||||||||    
T  3088580 gtcagatcatcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagt 3088481  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||||||||||||||||  ||||||||    
T  3088480 catatgtgtaggcatttgtactttgttgttttatg 3088446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 22286765 - 22286533
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||| |||| |||    
T  22286765 gtgatttcgtcgtcttcgcgcgacgttggtt-gttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggcatttgatcgcttcatatt 22286668  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||| ||| ||||| |||||||  ||||| |||||||||    
T  22286667 gtcagatcagcttcgatccagtgcagatccaatcaatgactttgacgtcatccacgttgcagatctggaaacatggttattccagagatttaaatatagt 22286568  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||||||||||||||||||||||||||    
T  22286567 catatgtgtaggcatttgtactttgccgttttatg 22286533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 120 - 333
Target Start/End: Original strand, 50519904 - 50520115
Alignment:
Q  120 gacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccag 219  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  50519904 gacgttggtt-gttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatcagcttcgatccag 50520001  T
Q  220 tgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtac 319  Q
    || |||| |||||||||| |||| | ||||||||| |||||||| ||| ||||| |||||||| ||||| |||||||||||||||| |||||||||||||    
T  50520002 tgcagattcaatcaatgattttggcgtcatccacgttgcagatctggaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtac 50520101  T
Q  320 tttgccgttttatg 333  Q
    |||| |||||||||    
T  50520102 tttgtcgttttatg 50520115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 100 - 332
Target Start/End: Complemental strand, 20201072 - 20200841
Alignment:
Q  100 tgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattg 199  Q
    |||||||| ||| |||||||||| |||||||||| ||| |||||||| || ||| ||||||||||||||||||| |||| ||||||||||||||||||||    
T  20201072 tgatttcgtcgttttcgtgcgacattggtttgtttgtcatctttgtgtgaggtt-gtttgtttttcttgtttctctcagttatttgatcggttcagattg 20200974  T
Q  200 tcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtc 299  Q
    ||||||||||||| ||| |||| |||||||||||||||||| | | || |||||| |||| ||||||||||||||||||| || ||||| ||||||||||    
T  20200973 tcagatcagcttcaatcaagtgcagatccaatcaatgacttcggcgtcttccacgttgcaaatccggagacatgattatttcggagatttaaatatagtc 20200874  T
Q  300 atatgtataggcatttgtactttgccgttttat 332  Q
    |||||| ||||||||||||||||||||||||||    
T  20200873 atatgtgtaggcatttgtactttgccgttttat 20200841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 29182623 - 29182392
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||    
T  29182623 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaagtatttgatcggttcagatt 29182525  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||  ||||||| ||||||||| |||||||||||||| ||||  | |||||||||||| ||||| |||||||||||||||  | ||||| |||||||||    
T  29182524 gtca--tcagctttgatccagtgcagatccaatcaatggctttagcgtcatccacgctgtagatctggagacatgattattttggagatttaaatatagt 29182427  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||||||||||| |||| | |||||||    
T  29182426 catatgtgtaggcatttgtattttgtcattttatg 29182392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 100 - 332
Target Start/End: Complemental strand, 20203254 - 20203023
Alignment:
Q  100 tgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattg 199  Q
    |||||||| ||| |||||||||| |||||||||| ||| |||||||| || ||| ||||||||||||||||||| |||| ||||||||||||||||||||    
T  20203254 tgatttcgtcgttttcgtgcgacattggtttgtttgtcatctttgtgtgaggtt-gtttgtttttcttgtttctctcagttatttgatcggttcagattg 20203156  T
Q  200 tcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtc 299  Q
    ||||||||||||| ||| |||| |||||||||||||||||| | | || |||||| |||| || |||||||||||||||| || ||||| ||||||||||    
T  20203155 tcagatcagcttcaatcaagtgcagatccaatcaatgacttcggcgtcttccacgttgcaaattcggagacatgattatttcggagatttaaatatagtc 20203056  T
Q  300 atatgtataggcatttgtactttgccgttttat 332  Q
    |||||| ||||||||||||||||||||||||||    
T  20203055 atatgtgtaggcatttgtactttgccgttttat 20203023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 45664320 - 45664553
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    |||||||||  |||||||||| ||||| |||| |||||| | ||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||    
T  45664320 gtgatttcgttgtcttcgtgctacgttcgttttttcgtcatatttgtgcgacgtt-gtttgtctttcttgtttctctcaggtatttgatcggttcagatt 45664418  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| |||||||||||||||||||| | ||||||||| |||||||||||||| ||| |||| ||| ||||| |||||||||    
T  45664419 gtcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggagatatggttatcccggagatttaaatatagt 45664518  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    | ||||| || |||||||||| ||||  |||||||    
T  45664519 cgtatgtgtatgcatttgtaccttgcaattttatg 45664553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 99 - 335
Target Start/End: Complemental strand, 43839533 - 43839297
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtcttt-gtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagat 197  Q
    ||||||||| | ||||||||||| ||||||||||||||||| ||| ||||||| || ||||||||||||||||||| |||||||||| ||| ||| ||||    
T  43839533 gtgatttcgtcatcttcgtgcgatgttggtttgttcgtcgtattttgtgcgacatt-gtttgtttttcttgtttctctcaggtatttaatcagtttagat 43839435  T
Q  198 tgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatag 297  Q
    |||||||||| ||||||| ||||| ||||||||||||| ||| || | ||||||||| |||||||||| |||| || |||||||||||||| |||||||     
T  43839434 tgtcagatcaacttcgattcagtgcagatccaatcaataactctggcgtcatccacgttgcagatccgaagacgtggttattccgaagatttaaatataa 43839335  T
Q  298 tcatatgtataggcatttgtactttgccgttttatgat 335  Q
    |||||||| |||||||||||||||||||||||||||||    
T  43839334 tcatatgtgtaggcatttgtactttgccgttttatgat 43839297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 33977939 - 33977707
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||  ||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||| ||||| ||    
T  33977939 gtgatttcatcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgtt-gtttgtttgtcttgtttctctcaggtatttgatcgcttcagttt 33977842  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    || ||||||| |||||| ||||| ||||||||||||||||||||   ||||||||| |||||||||||| | ||| |||||| | | ||| |||||||||    
T  33977841 gttagatcagtttcgattcagtgcagatccaatcaatgactttggtgtcatccacgttgcagatccggaaatatggttattctggaaatttaaatatagt 33977742  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
     |||||| |||||||||||||||||||||||||||    
T  33977741 tatatgtgtaggcatttgtactttgccgttttatg 33977707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 99 - 323
Target Start/End: Original strand, 21803629 - 21803853
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgttt-ttcttgtttctatcaggtatttgatcggttcagat 197  Q
    |||||||||  ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||| || |||||||| | ||||||||||| |||||| ||    
T  21803629 gtgatttcgtagtcttcgtgcgacattggtttgttcgtcgtctttgtgcgacgtttttttttttgtttttgtttctcttaggtatttgattggttca-at 21803727  T
Q  198 tgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatag 297  Q
    ||| |||||||||||||||| ||| | |||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||| ||||| ||||| ||    
T  21803728 tgttagatcagcttcgatcccgtgcaaatccaatcaatgactttgacgtcatccacgttgcagatccggagacatggttattccggagatttaaatacag 21803827  T
Q  298 tcatatgtataggcatttgtactttg 323  Q
    |||||||| |||||| ||||||||||    
T  21803828 tcatatgtgtaggcacttgtactttg 21803853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 99 - 315
Target Start/End: Complemental strand, 41882424 - 41882210
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||    
T  41882424 gtgatttcgtcgtcttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgatcgcttcagatt 41882327  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||||||||||| |||||||| ||||  |||||||||||||| | ||||||||| |||||||||  | | ||  ||||| || ||||| |||||||||    
T  41882326 gtcagatcagcttcaatccagtgcagatttaatcaatgactttggcgtcatccacgttgcagatccaaaaaaatagttatttcggagatttaaatatagt 41882227  T
Q  299 catatgtataggcattt 315  Q
    ||||||| |||||||||    
T  41882226 catatgtgtaggcattt 41882210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 99 - 332
Target Start/End: Original strand, 20251756 - 20251988
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||| ||||||  | |||||||||  ||||| ||||||||| ||||||||||| ||    
T  20251756 gtgattttgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgtgacgtta-tatgtttttctattttctctcaggtattcgatcggttcaggtt 20251854  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||| ||||||||||||||| | ||||||||||||||||||||  |||||||| |||||||||||||||||| || ||  |  |||| |||||||||    
T  20251855 gtcagattagcttcgatccagtgcaaatccaatcaatgactttgactccatccacgttgcagatccggagacatggttgttttggtgatttaaatatagt 20251954  T
Q  299 catatgtataggcatttgtactttgccgttttat 332  Q
     |||||| || ||| |||||||||||||||||||    
T  20251955 tatatgtgtaagcaattgtactttgccgttttat 20251988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 102 - 333
Target Start/End: Complemental strand, 7656527 - 7656302
Alignment:
Q  102 atttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtc 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||   |||||||| |||||||||||| |||||||||||||||||| |||||||     
T  7656527 atttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcga-tattgtttgtctttcttgtttctctcaggtatttgatcggtttagattgtt 7656429  T
Q  202 agatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcat 301  Q
    |||||||||| ||| |     |||||||||||||||||||  | ||||||||| |||| || |||| ||||| |||||||| ||||| ||||||||||||    
T  7656428 agatcagctttgatac-----agatccaatcaatgactttagcgtcatccacgttgcaaattcggaaacatggttattccggagatttaaatatagtcat 7656334  T
Q  302 atgtataggcatttgtactttgccgttttatg 333  Q
    |||| || ||||||||||||||  ||||||||    
T  7656333 atgtctaagcatttgtactttgtagttttatg 7656302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 167 - 333
Target Start/End: Original strand, 33076451 - 33076617
Alignment:
Q  167 tgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccgg 266  Q
    ||||||| |||||||||||||||||||||||||| |||| ||||| ||||||||| |||||||||||||||||||||| ||||||||| |||||||||||    
T  33076451 tgtttctttcaggtatttgatcggttcagattgttagattagctttgatccagtgcagatccaatcaatgactttgacgtcatccacgttgcagatccgg 33076550  T
Q  267 agacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    || |||| |||||||| |||||  ||||||||||||||| | |||||||||||||||||||||||||    
T  33076551 aggcatggttattccggagatttgaatatagtcatatgtgttggcatttgtactttgccgttttatg 33076617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 913331 - 913098
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    |||||||||| ||||| ||||| | ||| |||||||||||||||||||||||||| |||||| ||||||||||   |  |||||||| ||||||||||||    
T  913331 gtgatttcgctgtcttagtgcggcattgttttgttcgtcgtctttgtgcgacgtt-gtttgtctttcttgttttgtttgggtatttgttcggttcagatt 913233  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||   ||||| ||| ||||||||||||||||    |||| || ||| | |||||||||    
T  913232 gtcagatcagcttcgatccagtgcagatcaaatcaatgactttggagtcatcaacgttgcagatccggagacaaaggtatttcggagacttaaatatagt 913133  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||| || ||||||||||||||||||    
T  913132 catatgtgtaggctttagtactttgccgttttatg 913098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 135 - 332
Target Start/End: Original strand, 11846684 - 11846879
Alignment:
Q  135 gtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaa 234  Q
    |||||||||||||||||||| ||| |||  ||||||||| ||||||||||||||||||||||||||||||||||||| |||||  || | ||||||||||    
T  11846684 gtcgtctttgtgcgacgtttttttcttt--cttgtttctctcaggtatttgatcggttcagattgtcagatcagctttgatccgatgcatatccaatcaa 11846781  T
Q  235 tgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttat 332  Q
    ||| |||| | ||||||||| |||||||||||||||||| |||||| | | ||| |||||||||||||||| |||||||||||| ||| |||||||||    
T  11846782 tgattttggcgtcatccacgttgcagatccggagacatggttattctggatatttaaatatagtcatatgtgtaggcatttgtatttttccgttttat 11846879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 47914608 - 47914375
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgttt-ctatcaggtatttgatcggttcagat 197  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||||| ||||||| ||||||||||||||||| || |||||||||||||  ||||||||    
T  47914608 gtgatttcgtcgtcttcgtgcgacgttggtt-gtttgtcgtctttgtccgacgtt-gtttgtttttcttgttttctctcaggtatttgattagttcagat 47914511  T
Q  198 tgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatag 297  Q
    ||| | |||||||||||| ||||| |||||||||||||||||||| | ||||||||| |||||||||  | ||||| || || || ||||| ||| ||||    
T  47914510 tgttatatcagcttcgattcagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccttaaacatggttgtttcggagatttaaacatag 47914411  T
Q  298 tcatatgtataggcatttgtactttgccgttttatg 333  Q
    |||| ||| ||| ||||||||||||| | |||||||    
T  47914410 tcatgtgtgtagacatttgtactttgtcattttatg 47914375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 4019694 - 4019930
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt--tgtttgtttttcttgtttctatcaggtatttgatcggttcaga 196  Q
    ||||||||| |||||| |||||||||||  |||||||||||||||||||| ||||  | ||||| ||| ||||||   ||||||||||| ||||||||||    
T  4019694 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtctttgtgcggcgttgttttttgtctttattgttttgttcaggtatttgttcggttcaga 4019793  T
Q  197 ttgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatata 296  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||| | || || ||| ||||||||||||| ||||| ||||| | ||| |  ||||||    
T  4019794 ttgtcagatcagcttagatccagtgcagatccaatcaatgactttggcgtcgtcaacgttgcagatccggaggcatgagtattctggagacttgaatata 4019893  T
Q  297 gtcatatgtataggcatttgtactttgccgttttatg 333  Q
    || || ||||||||| | ||||||||| |||||||||    
T  4019894 gtaatctgtataggcttatgtactttgtcgttttatg 4019930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 100 - 333
Target Start/End: Original strand, 40797133 - 40797365
Alignment:
Q  100 tgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattg 199  Q
    ||||||||||||||| ||| ||| ||| |||||||||||||||||||||||||| |||||| ||||||||||   || |||||||| ||| |||||||||    
T  40797133 tgatttcgccgtcttagtgagacattgttttgttcgtcgtctttgtgcgacgtt-gtttgtctttcttgttttgttcgggtatttgttcgattcagattg 40797231  T
Q  200 tcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtc 299  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||   ||||| ||  || ||||||||||||| |  ||||||| ||| | ||||||||||    
T  40797232 tcagatcagcttcgatctagtgcagatcaaatcaatgactttggagtcatcaacattgtagatccggagacaagggtattccggagacttaaatatagtc 40797331  T
Q  300 atatgtataggcatttgtactttgccgttttatg 333  Q
    |||||| ||||| || |||||||| |||||||||    
T  40797332 atatgtgtaggctttagtactttgtcgttttatg 40797365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 99 - 335
Target Start/End: Complemental strand, 35501774 - 35501539
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | ||||||| || |||||| |||||||| ||||||||||||||||||  | |||||||||  ||||| ||||||||||||||||||||| ||    
T  35501774 gtgattttgtcgtcttcatgtgacgttagtttgttcatcgtctttgtgcgacgtta-tatgtttttctattttctctcaggtatttgatcggttcaggtt 35501676  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||| |||||||||||| || | || |||||||||||||||||  |||||||| |||||||||||||||||| || ||| |  |||| |||||||||    
T  35501675 gtcagattagcttcgatccaatgcaaattcaatcaatgactttgactccatccacgttgcagatccggagacatggttgttctggtgatttaaatatagt 35501576  T
Q  299 catatgtataggcatttgtactttgccgttttatgat 335  Q
    ||||||| || ||| || ||||||| | |||||||||    
T  35501575 catatgtgtaagcaattatactttgtcattttatgat 35501539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 111 - 333
Target Start/End: Complemental strand, 32237999 - 32237778
Alignment:
Q  111 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagct 210  Q
    |||| |||||| |||||||||||||||||||||||||| |||| |||||| ||||| |||||  ||||||||||| ||||||||||||||||||||||||    
T  32237999 tctttgtgcgatgttggtttgttcgtcgtctttgtgcggcgtt-gtttgtctttctagtttcgttcaggtatttgttcggttcagattgtcagatcagct 32237901  T
Q  211 tcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtatagg 310  Q
    | ||||||||| | || ||||||||||||||||  |  |||||| |||||||||| |||||||  |||| || |||||  ||| ||||||||||| ||||    
T  32237900 tagatccagtgcacattcaatcaatgactttgatgttgtccacgttgcagatccgaagacatggatatttcggagatttgaatttagtcatatgtgtagg 32237801  T
Q  311 catttgtactttgccgttttatg 333  Q
    | ||||| |||||| ||||||||    
T  32237800 cttttgtgctttgcagttttatg 32237778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 22844151 - 22844384
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||  |||||| ||||||| ||| |||||||||||||||||||||||||| |||||| ||||||||||   ||||||||||| ||||||||||||    
T  22844151 gtgatttcatcgtcttagtgcgacattgttttgttcgtcgtctttgtgcgacgtt-gtttgtctttcttgttttgttcaggtatttgttcggttcagatt 22844249  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||| |||||||| |||| ||||| ||||||||||||||   |  || ||  |||||||||| |||||||  ||||||| |||   |||||||||    
T  22844250 gtcagatcaacttcgatcaagtgcagatcaaatcaatgactttggagttgtcaacattgcagatccgaagacatgggtattccggagacctaaatatagt 22844349  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||  ||||| || |||||||| |||||||||    
T  22844350 catatgcgtaggctttagtactttgtcgttttatg 22844384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 99 - 323
Target Start/End: Original strand, 53426897 - 53427120
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| ||||||||||   ||||||||| |||||||| | | ||||||||| ||||||||||   ||||||||||| |||||| |||||    
T  53426897 gtgatttcgtcgtcttagtgcgacgttttgttgttcgtcatctttgtgtgcc-tttgtttgtctttcttgttttgttcaggtatttgttcggtttagatt 53426995  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||| ||||| |||  |||| |||||||||||||||||||| | || || ||| |||||||||| |||| ||| ||||||||||| |  ||||||||    
T  53426996 gtcagataagcttagatatagtgcagatccaatcaatgactttggcgtcgtcaacgttgcagatccgaagacttgagtattccgaagacttgaatatagt 53427095  T
Q  299 catatgtataggcatttgtactttg 323  Q
    ||||||| ||||| |||||||||||    
T  53427096 catatgtgtaggcttttgtactttg 53427120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 21585998 - 21586231
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| | |||| ||| ||||||| ||| |||||||||||| |  ||| ||||||||| ||| ||||||   ||||||| ||| ||||||||||||    
T  21585998 gtgatttcgtcatcttagtgtgacgttgatttattcgtcgtctttttttgac-tttgtttgtcttttttgttttgttcaggtacttgttcggttcagatt 21586096  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||| |||||||||| ||||| | |||||||||||||||||||| || |||||| || |||||||||||||||  ||||||| ||| |  ||||||||    
T  21586097 gtcagaccagcttcgattcagtgcaaatccaatcaatgactttgacgtcgtccacgttggagatccggagacatgtgtattccggagagttgaatatagt 21586196  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
     |||||| ||| | |||||||||||| ||||||||    
T  21586197 gatatgtgtagccttttgtactttgctgttttatg 21586231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 39340298 - 39340531
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    |||||||  ||||||| ||||||| ||| |||| |||||||||||||||| |||| |||||| |||||||||||  | | ||||||| |||||| |||||    
T  39340298 gtgattttaccgtcttagtgcgactttgttttgctcgtcgtctttgtgcggcgtt-gtttgtctttcttgtttcgttaatgtatttgttcggtttagatt 39340396  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||| |||| ||| |||| ||||  ||| ||||||||||||||| | || || ||| ||||||||||||||||||  ||||||| ||| |  ||||||||    
T  39340397 gtcatatcaacttagatctagtgctgattcaatcaatgactttgtcgtcgtcaacgttgcagatccggagacatgtgtattccggagacttgaatatagt 39340496  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||| ||| |||||| ||||||||||    
T  39340497 catatgtgtaggcttttatacttttccgttttatg 39340531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 175 - 333
Target Start/End: Original strand, 37051768 - 37051926
Alignment:
Q  175 tcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatga 274  Q
    |||||| |||| ||| |||||||||||||||||| |||||||||||| |||||||| |||| |||||| | ||||| ||| ||||||||||||| |||      
T  37051768 tcaggtgtttgctcgattcagattgtcagatcagtttcgatccagtgcagatccaaccaataactttggcgtcatcaacgttgcagatccggaggcatag 37051867  T
Q  275 ttattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
     |||||||||||||  ||||||||||||| | ||||| | |||||||||||||||||||    
T  37051868 ctattccgaagattttaatatagtcatatttgtaggcttatgtactttgccgttttatg 37051926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 99 - 332
Target Start/End: Complemental strand, 32089945 - 32089714
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| ||||||| ||  ||||| ||||||||||||| | | || |||||| |||||||||||  ||| ||||||| | |||| |||||    
T  32089945 gtgatttcgtcgtcttagtgcgacattactttgtccgtcgtctttgtggggcatt-gtttgtctttcttgtttcgttcatgtatttgtttggtttagatt 32089847  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||| |||||||||||||||||| ||||||||||||||| |||||| || || ||| || | |||| |||||||   ||||||| ||| |  ||||||||    
T  32089846 gtcatatcagcttcgatccagtgcagatccaatcaatgattttgacgtcgtcaacgttgaatatcc-gagacataggtattccggagacttgaatatagt 32089748  T
Q  299 catatgtataggcatttgtactttgccgttttat 332  Q
    || |||| ||||| ||||||||||| ||||||||    
T  32089747 cacatgtgtaggcttttgtactttgtcgttttat 32089714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 99 - 206
Target Start/End: Complemental strand, 14741340 - 14741234
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttg-tttctatcaggtatttgatcggttcagat 197  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||  ||||||||    
T  14741340 gtgatttcgtcgtcttcgtgcgacgttgg-ttgttcgtcgtctttgtgcgacg-ttgtttgtttttcttgttttctctcaggtatttgattagttcagat 14741243  T
Q  198 tgtcagatc 206  Q
    |||||||||    
T  14741242 tgtcagatc 14741234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 153 - 333
Target Start/End: Original strand, 50460342 - 50460522
Alignment:
Q  153 ttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatcca 252  Q
    |||||||| |||||| ||||  |||| |||||| |||||| ||||||||||||||| ||||||||| || | ||||||||||| |||||||| |  || |    
T  50460342 ttgtttgtctttcttatttcgttcagttatttgttcggtttagattgtcagatcagtttcgatccaatgcaaatccaatcaataactttgacgttgtcaa 50460441  T
Q  253 cgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    || |||| ||||| |||||||| |||||| |||| |  ||||||||||||||| ||||| |||||||||||  ||||||||    
T  50460442 cgttgcaaatccgaagacatgagtattccaaagacttgaatatagtcatatgtgtaggcttttgtactttgttgttttatg 50460522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 40462010 - 40461777
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | |||||| |||||| |||| ||||||||||||||||||||| |||| |||||| |||||||||||   ||  |||||||| ||||||||||    
T  40462010 gtgattttgtcgtcttagtgcgatgttgatttgttcgtcgtctttgtgcggcgtt-gtttgtctttcttgtttcatacatatatttgattggttcagatt 40461912  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||| ||||| ||||   |||||||||||||||||| |||  | |  |||||  |||||||| |||||||||  |||  |  ||| |  ||||||||    
T  40461911 gtcagattagctttgatcatatgtagatccaatcaatgaatttagcgttttccaccttgcagatctggagacatgggtatcacagagacttgaatatagt 40461812  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||||||| | ||||||||||| |||| ||||    
T  40461811 catatgtatagccttttgtactttgtcgttctatg 40461777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 111 - 331
Target Start/End: Complemental strand, 29776693 - 29776474
Alignment:
Q  111 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagct 210  Q
    |||| |||||||||| ||||||||||||||||||| || |||| |||||| |||||||||||  ||||||||||| ||||||  ||||||||||||||||    
T  29776693 tctttgtgcgacgtttgtttgttcgtcgtctttgtacggcgtt-gtttgtctttcttgtttcgttcaggtatttgttcggttttgattgtcagatcagct 29776595  T
Q  211 tcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtatagg 310  Q
    | ||| ||||| | ||||||||||| ||||||   |  ||||||   || ||||||||||| |  |||| |  ||| |  |||||||||||||||  |||    
T  29776594 tagattcagtgcaaatccaatcaataactttggtgttgtccacgtcacaaatccggagacaagggtatttcagagacttgaatatagtcatatgtgcagg 29776495  T
Q  311 catttgtactttgccgtttta 331  Q
    | ||||||||||| |||||||    
T  29776494 cttttgtactttgtcgtttta 29776474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 34767084 - 34767318
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcg-tcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagat 197  Q
    ||||| ||| |||||| |||||| ||||||||  ||  ||||||||||| || ||| |||||| |||||||||||  ||| ||||||| || ||||| ||    
T  34767084 gtgatctcgtcgtctttgtgcgatgttggttttgtctatcgtctttgtgtgatgtt-gtttgtctttcttgtttcgttcaagtatttgttcagttcaaat 34767182  T
Q  198 tgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatag 297  Q
    ||||||| || |||||||| |||| ||||| ||| ||||| ||||   || |||||  |||| |||||||||||||  ||||||| ||| |  |||||||    
T  34767183 tgtcagaacaacttcgatcaagtgcagatctaattaatgattttggtgtcgtccacattgcatatccggagacatgggtattccggagacttgaatatag 34767282  T
Q  298 tcatatgtataggcatttgtactttgccgttttatg 333  Q
    || ||||| ||||| |||||||||||||||||||||    
T  34767283 tcttatgtgtaggcttttgtactttgccgttttatg 34767318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 109 - 242
Target Start/End: Original strand, 42106249 - 42106379
Alignment:
Q  109 cgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcag 208  Q
    |||||| ||||||||||| |||||||||| ||||||  |||||||  ||||| ||||||||||   |  |||||||| ||||||||||||||||||||||    
T  42106249 cgtctttgtgcgacgttgttttgttcgtcatctttg--cgacgtta-tttgtctttcttgttttgtttgggtatttgttcggttcagattgtcagatcag 42106345  T
Q  209 cttcgatccagtgtagatccaatcaatgactttg 242  Q
    ||||||||||||| ||||| ||||||||||||||    
T  42106346 cttcgatccagtgcagatcaaatcaatgactttg 42106379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 99 - 242
Target Start/End: Complemental strand, 25939494 - 25939352
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    |||||||||  ||||  ||||||||||| |||||| |||||||||||||| |||| |||||| ||| |||||||  |||| |||||| |  |||||||||    
T  25939494 gtgatttcgttgtctcagtgcgacgttgttttgttagtcgtctttgtgcggcgtt-gtttgtctttgttgtttcgttcagatatttgttatgttcagatt 25939396  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttg 242  Q
    || |||||||||| ||| ||||| ||||||||||||||||||||    
T  25939395 gttagatcagcttagattcagtgcagatccaatcaatgactttg 25939352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 231 - 333
Target Start/End: Original strand, 10977473 - 10977575
Alignment:
Q  231 tcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttt 330  Q
    |||||||||||| | ||||||||| |||||||||||| ||||| ||||| || ||||| |||||||||||||||| |||||| ||||||||||| |||||    
T  10977473 tcaatgactttggcgtcatccacgttgcagatccggatacatggttatttcggagatttaaatatagtcatatgtgtaggcaattgtactttgctgtttt 10977572  T
Q  331 atg 333  Q
    |||    
T  10977573 atg 10977575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 242
Target Start/End: Complemental strand, 22893730 - 22893588
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| | |||| |||||||||||||||||||||| ||||||| || |||| |||||| |||||||||||  |||| ||||||   |||||| |||    
T  22893730 gtgatttcgtcttcttagtgcgacgttggtttgttcgtcatctttgtacggcgtt-gtttgtctttcttgtttcgttcagatatttgtatggttcatatt 22893632  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttg 242  Q
    |||| || || || ||||||||| ||||| ||||||||||||||    
T  22893631 gtcatatgagttttgatccagtgcagatctaatcaatgactttg 22893588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 239
Target Start/End: Complemental strand, 36540688 - 36540550
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| ||||||||||| |||| |||||||||| ||| || ||| |||||| |||||||||||  ||| |||||||  |||||||||||    
T  36540688 gtgatttcgtcgtcttagtgcgacgttgttttgatcgtcgtctt-gtgggatgtt-gtttgtctttcttgtttcattcaagtatttgtccggttcagatt 36540591  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgact 239  Q
    ||||||||| ||||||| ||||  ||||  |||||||||||    
T  36540590 gtcagatcaacttcgattcagtacagattaaatcaatgact 36540550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 155 - 310
Target Start/End: Original strand, 26412442 - 26412599
Alignment:
Q  155 gtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagat--ccaatcaatgactttgacatcatcca 252  Q
    |||||| | |||||||||  ||| ||||||| ||||||||||||||||||| |  |||||||||||| | ||  ||||||||||| |||| | || || |    
T  26412442 gtttgtctctcttgtttcgttcaagtatttgttcggttcagattgtcagattaaattcgatccagtgcacatatccaatcaatgagtttggcgtcgtcaa 26412541  T
Q  253 cgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtatagg 310  Q
    || |||| |||||||||||||| |||| | |||| | |||||||||||||||| ||||    
T  26412542 cgttgcaaatccggagacatgaatatttcaaagacttaaatatagtcatatgtgtagg 26412599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 131 - 333
Target Start/End: Original strand, 2598210 - 2598410
Alignment:
Q  131 gttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaa 230  Q
    |||| |||||||||||| ||||| |||| | |||||||||||  ||| ||||||| |||||| ||| | | |||||| ||| |||  |||| ||||||||    
T  2598210 gttcatcgtctttgtgcaacgtt-gtttctctttcttgtttcgttcatgtatttgttcggtttagagttt-agatcaactttgatttagtgcagatccaa 2598307  T
Q  231 tcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttt 330  Q
    ||||||||||||   || || | | |||| || || |||||||| |||| || ||| |  ||||||||||||||| ||||||||||||||||| ||| ||    
T  2598308 tcaatgactttggtgtcgtcaatgttgcaaattcgaagacatgagtatttcggagactagaatatagtcatatgtgtaggcatttgtactttgtcgtgtt 2598407  T
Q  331 atg 333  Q
    |||    
T  2598408 atg 2598410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 191 - 281
Target Start/End: Complemental strand, 25374006 - 25373916
Alignment:
Q  191 ttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattcc 281  Q
    ||||||| ||||||||| ||||||||||||| | ||| |||||||||||||||| || | |||| |||||||||||||| |||| ||||||    
T  25374006 ttcagatcgtcagatcaacttcgatccagtgcatatctaatcaatgactttgacgtcgttcacgttgcagatccggagatatgagtattcc 25373916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 27831289 - 27831369
Alignment:
Q  191 ttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagaca 271  Q
    ||||||||||||||||||||| |||| |||| ||||| |||| ||||||||| | || ||||||||| |||||||||||||    
T  27831289 ttcagattgtcagatcagctttgatctagtgcagatctaatccatgactttggcgtcgtccacgctgtagatccggagaca 27831369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 48061029 - 48060963
Alignment:
Q  175 tcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgacttt 241  Q
    ||||||||||| ||||||||||||||||||| || ||||||| |||| | |||||||||||||||||    
T  48061029 tcaggtatttgttcggttcagattgtcagattagtttcgatctagtgcaaatccaatcaatgacttt 48060963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 332
Target Start/End: Complemental strand, 31462638 - 31462538
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    ||||||||||| | || || ||| ||||||||| ||||||||||||||||  ||||   |||||| |||||| | ||||||| |||||||||||||||||    
T  31462638 caatgactttggcgtcgtcaacggtgcagatccagagacatgattattccagagatatgaatataatcatatttgtaggcatatgtactttgccgtttta 31462539  T
Q  332 t 332  Q
    |    
T  31462538 t 31462538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 273
Target Start/End: Original strand, 33793922 - 33794038
Alignment:
Q  157 ttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgct 256  Q
    |||||||| ||||||   ||||||||||| ||| |||||||| ||| |||| |||| |||||||||| ||||||||| ||| |||  | ||||||||| |    
T  33793922 ttgtttttgttgttttgttcaggtatttggtcgattcagattatcatatcaacttcaatccagtgtatatccaatcattgattttagcgtcatccacgtt 33794021  T
Q  257 gcagatccggagacatg 273  Q
    ||||||| | |||||||    
T  33794022 gcagatctgaagacatg 33794038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 332
Target Start/End: Complemental strand, 14741239 - 14741165
Alignment:
Q  258 cagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttat 332  Q
    |||||||| | ||||| |||||||| ||||| ||| |||||||||||| ||||| ||||||||||| ||||||||    
T  14741239 cagatccgtaaacatggttattccggagatttaaaaatagtcatatgtgtaggcgtttgtactttgtcgttttat 14741165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 153
Target Start/End: Original strand, 42106212 - 42106265
Alignment:
Q  100 tgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt 153  Q
    ||||||||||||||| ||||||||||| |||  |||||||||||||||||||||    
T  42106212 tgatttcgccgtcttagtgcgacgttgtttttatcgtcgtctttgtgcgacgtt 42106265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 333
Target Start/End: Complemental strand, 49627987 - 49627886
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    ||||||||||| | || || ||| ||||||||||||||||||| ||||||  |||    ||||||||||||| | |||||||  ||||||||||||||||    
T  49627987 caatgactttggcgtcgtcaacgttgcagatccggagacatgagtattccagagacatgaatatagtcatatttgtaggcataggtactttgccgtttta 49627888  T
Q  332 tg 333  Q
    ||    
T  49627887 tg 49627886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 333
Target Start/End: Original strand, 55455132 - 55455209
Alignment:
Q  256 tgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||||||||||||||| ||||||| |||    ||||||||||||| | || |||| |||||||||||||||||||    
T  55455132 tgcagatccggagacatgagtattccggagacatgaatatagtcatatttgtaagcatatgtactttgccgttttatg 55455209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 211
Target Start/End: Complemental strand, 1220262 - 1220151
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | |||||| |||||| |||| ||||||||||||||||||||| | ||||||||| ||| |||||||  |  |||||||| ||  ||||| ||    
T  1220262 gtgattttgtcgtcttagtgcgatgttgttttgttcgtcgtctttgtgcggc-tttgtttgtcttttttgtttcgtttgggtatttgttcatttcaggtt 1220164  T
Q  199 gtcagatcagctt 211  Q
    |||| ||||||||    
T  1220163 gtcatatcagctt 1220151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 182 - 333
Target Start/End: Complemental strand, 1806395 - 1806241
Alignment:
Q  182 tttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatca---atgactttgacatcatccacgctgcagatccggagacatgattat 278  Q
    |||| ||| |||||||||||| ||| ||||| ||| |||| ||||| || ||   ||||||||| | ||||| ||| |||| ||||| || ||||  |||    
T  1806395 tttgttcgattcagattgtcaaatctgcttcaatctagtgcagatctaaccagcaatgactttggcgtcatcaacgttgcaaatccgaaggcatgggtat 1806296  T
Q  279 tccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    |||| |||||  ||||||||||||| ||||||| | |||| |||||||| |||||    
T  1806295 tccggagattttaatatagtcatatttataggcttatgtattttgccgtattatg 1806241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 43242959 - 43243051
Alignment:
Q  152 tttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgac 244  Q
    ||||||||||||| |||||||  ||||||||||  |||| ||||||||||| |||| ||| |||  |||| ||||| |||||||||| |||||    
T  43242959 tttgtttgtttttattgtttcattcaggtatttattcggctcagattgtcatatcaactttgatatagtgcagatcaaatcaatgaccttgac 43243051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 333
Target Start/End: Original strand, 2148020 - 2148087
Alignment:
Q  266 gagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    |||| |||| ||||||||||| |  ||||||||||||| | ||| |||||||||||||||||||||||    
T  2148020 gagagatgagtattccgaagacttgaatatagtcatatttgtagacatttgtactttgccgttttatg 2148087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 25374085 - 25374013
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttc 172  Q
    |||||||| ||||||| ||||||| ||||||||||  |||||| ||||||||| |||||| | |||||||||||    
T  25374085 gtgatttctccgtcttagtgcgactttggtttgtttatcgtctatgtgcgacg-ttgtttttctttcttgtttc 25374013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 19861171 - 19861123
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattc 280  Q
    |||||||||||||||| || ||| ||||||||||||||||||| |||||    
T  19861171 caatgactttgacatcgtcaacgttgcagatccggagacatgagtattc 19861123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 333
Target Start/End: Complemental strand, 48652331 - 48652231
Alignment:
Q  233 aatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttat 332  Q
    |||||||||| | || || ||| |||||||||||||||||||  |||||| ||| |  ||||||||||||| | |||||||  |||| |||| |||||||    
T  48652331 aatgactttggcgtcgtcaacgttgcagatccggagacatgaggattccggagacttgaatatagtcatatttgtaggcataggtaccttgctgttttat 48652232  T
Q  333 g 333  Q
    |    
T  48652231 g 48652231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 40013164 - 40013114
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccg 282  Q
    ||||||||||||| || || ||| ||||||||||||||||||| |||||||    
T  40013164 caatgactttgacgtcgtcaacgttgcagatccggagacatgagtattccg 40013114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 20201171 - 20201134
Alignment:
Q  1 agggtcaatttttggcacaaaatcacccctctaactcg 38  Q
    |||||||||||||| | |||||||||||||||||||||    
T  20201171 agggtcaatttttgacccaaaatcacccctctaactcg 20201134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 20203353 - 20203316
Alignment:
Q  1 agggtcaatttttggcacaaaatcacccctctaactcg 38  Q
    |||||||||||||| | |||||||||||||||||||||    
T  20203353 agggtcaatttttgacccaaaatcacccctctaactcg 20203316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 35670594 - 35670655
Alignment:
Q  182 tttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttga 243  Q
    |||| ||| |||||||||| |||| | |||||||||| || | |||||||||||||||||||    
T  35670594 tttgttcgattcagattgttagataaacttcgatccaatgcatatccaatcaatgactttga 35670655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 333
Target Start/End: Complemental strand, 41868215 - 41868114
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    ||||||||||  |||| || ||| |||||| |||||||||||| |||| |  ||| |  ||||||||||||| | ||| |||  ||||||||||||||||    
T  41868215 caatgactttagcatcgtcaacgttgcagaaccggagacatgagtatttctgagacttgaatatagtcatatttgtagacataggtactttgccgtttta 41868116  T
Q  332 tg 333  Q
    ||    
T  41868115 tg 41868114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 50519791 - 50519828
Alignment:
Q  1 agggtcaatttttggcacaaaatcacccctctaactcg 38  Q
    |||||||||||||| | |||||||||||||||||||||    
T  50519791 agggtcaatttttgacccaaaatcacccctctaactcg 50519828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 333
Target Start/End: Original strand, 55446318 - 55446395
Alignment:
Q  256 tgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||||||||| ||||| ||||| ||||| |  ||||||||||||| |||| ||||   |||||||| ||||||||    
T  55446318 tgcagatccggagtcatgagtattctgaagacttgaatatagtcatatttatatgcatagatactttgctgttttatg 55446395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 333
Target Start/End: Original strand, 33637641 - 33637741
Alignment:
Q  233 aatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttat 332  Q
    |||||||||| | || || ||| |||||||||| ||||||||  |||||| ||| |  ||||||||||||| | |||||||  |||| ||||| ||||||    
T  33637641 aatgactttggcgtcgtcaacgttgcagatccgtagacatgaggattccggagacttgaatatagtcatatttgtaggcataggtaccttgccattttat 33637740  T
Q  333 g 333  Q
    |    
T  33637741 g 33637741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 167; Significance: 2e-89; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 22344927 - 22344694
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  22344927 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgatcagttcagatt 22344829  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||| ||||| |||||||| ||||| |||||||||    
T  22344828 gtcagatcagcttcgatccagtgcagatccaatcaatgactttgacgtcatccacgttgcagatccggatacatggttattccggagatttaaatatagt 22344729  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||| | ||||||||| | ||||||||    
T  22344728 catatgtgtaggtaattgtactttactgttttatg 22344694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 101 - 333
Target Start/End: Original strand, 21326574 - 21326805
Alignment:
Q  101 gatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgt 200  Q
    ||||||| |||||||||| ||| |||||||||||||||||||||||||||||| |||||| |||||||||| | ||||||||||||||||||||||||||    
T  21326574 gatttcgtcgtcttcgtgtgacattggtttgttcgtcgtctttgtgcgacgtt-gtttgtctttcttgtttttctcaggtatttgatcggttcagattgt 21326672  T
Q  201 cagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtca 300  Q
    ||||||||||||||||||||| |||||||||||||||||||| | ||||||||| ||||||||||||||||||  ||||||||||||| |||||||||||    
T  21326673 cagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggagacatggctattccgaagatttaaatatagtca 21326772  T
Q  301 tatgtataggcatttgtactttgccgttttatg 333  Q
    ||||| ||||||||||||| |||||||||||||    
T  21326773 tatgtgtaggcatttgtaccttgccgttttatg 21326805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 44562764 - 44562531
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||| ||||||||||||| ||||||||||    
T  44562764 gtgatttcgtcatcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacatt-gtttgtctttcttgtttctctcaggtatttgataggttcagatt 44562666  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| |||||||||||||||||||| | ||||| ||| ||||||||||||||||||| ||||||| ||||| |||||||||    
T  44562665 gtcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatctacgttgcagatccggagacatgactattccggagatttaaatatagt 44562566  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||||||||||  |||||||||||||    
T  44562565 catatgtgtaggcatttgtatcttgccgttttatg 44562531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 99 - 317
Target Start/End: Original strand, 5832333 - 5832550
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||    
T  5832333 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtatttgtgcgacgtt-gtttgtctttcttgtttctctcaggtatttgatcggttcagatt 5832431  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||| |||||||||||||||| ||||| |||||||||||||||| ||||||||| |||||||| |||||||||||||||||| ||||| |||||||||    
T  5832432 gtcagaccagcttcgatccagtgcagatctaatcaatgactttgacgtcatccacgttgcagatctggagacatgattattccggagatttaaatatagt 5832531  T
Q  299 catatgtataggcatttgt 317  Q
    ||||||| |||||||||||    
T  5832532 catatgtgtaggcatttgt 5832550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 15276465 - 15276228
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttctt---gtttctatcaggtatttgatcggttcag 195  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||  ||| ||||||||   |||||| |||||||||||||||||||||    
T  15276465 gtgatttcgtcgttttcgtgcgacgttggtttgttcgtcgtctttgtgcgatgttgttttttttttcttcttgtttctctcaggtatttgatcggttcag 15276366  T
Q  196 attgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatat 295  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||| | ||||||||| |||||||| |||||||||||||||||  ||||| ||||||    
T  15276365 attgtgagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatctggagacatgattattccagagatttaaatat 15276266  T
Q  296 agtcatatgtataggcatttgtactttgccgttttatg 333  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  15276265 agtcatatgtgtaggcatttgtaccttgccgttttatg 15276228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 38646683 - 38646916
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||| | |||||||||||    
T  38646683 gtgattttgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcatgtatttaaccggttcagatt 38646781  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    | |||||||||||||||| |||||||||| |||||||||||||| | ||||||||| |||||||||||||||||| |||||| | ||||| |||||||||    
T  38646782 gccagatcagcttcgatctagtgtagatcaaatcaatgactttggcgtcatccacgttgcagatccggagacatggttattctggagatttaaatatagt 38646881  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||| ||||||||||||||| |||||||    
T  38646882 catatgtgtagacatttgtactttgcctttttatg 38646916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 114 - 333
Target Start/End: Complemental strand, 12967732 - 12967515
Alignment:
Q  114 tcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcg 213  Q
    ||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  12967732 tcgtgcgacgttggtttgttcgtcgtctttgtgcgacatt-gtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagcttcg 12967634  T
Q  214 atccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcat 313  Q
    |||||||| | ||||||||||||||||||   ||||||||| || ||||| |||||||||||||||||| ||||| |||||||||||||||| |||||||    
T  12967633 atccagtgcatatccaatcaatgactttggtgtcatccacgttgtagatctggagacatgattattccggagatt-aaatatagtcatatgtgtaggcat 12967535  T
Q  314 ttgtactttgccgttttatg 333  Q
    |||||| |||||||||||||    
T  12967534 ttgtaccttgccgttttatg 12967515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 99 - 330
Target Start/End: Original strand, 23257187 - 23257417
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||| ||||||    
T  23257187 gtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgattggtccagatt 23257285  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||  || |||||||||||| || |||||||||||||||||||| | ||||||||| |||||||||||| |||||||||||||| ||||| | |||||||    
T  23257286 gtctaattagcttcgatccactgcagatccaatcaatgactttggcgtcatccacgttgcagatccggatacatgattattccggagatttagatatagt 23257385  T
Q  299 catatgtataggcatttgtactttgccgtttt 330  Q
    ||||||| |||||||||||||||||| |||||    
T  23257386 catatgtgtaggcatttgtactttgctgtttt 23257417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 36621451 - 36621683
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | |||||||||||| |||||||||||| |||||||||||||||| |  ||||||||||||||||||| ||||||||||||||||||||||||    
T  36621451 gtgattttgtcgtcttcgtgcggcgttggtttgtttgtcgtctttgtgcgacata-gtttgtttttcttgtttctttcaggtatttgatcggttcagatt 36621549  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||| |||| ||| ||||||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||  ||||| ||||||| |    
T  36621550 gtcacatcaactttgatccagtgcaaatccaatcaatgactttggcatcatccacgttgcagatccggagacatg-ttattccagagatttaaatataat 36621648  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||||||||||||||||| |||||||    
T  36621649 catatgtgtaggcatttgtactttgccattttatg 36621683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 99 - 320
Target Start/End: Original strand, 4564616 - 4564835
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||| ||||||||    
T  4564616 gtgatttcgtcgtcttcgtgcgacgttggtt-gttagtcgtctttgtgcgacgtt-gtttgtttttcttatttctctcaggtatttgatcgcttcagatt 4564713  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| |||| |||||||||||||||   ||||||||  |||||||||||| ||||| |||||||| ||||| |||||||||    
T  4564714 gtcagatcagcttcgatccagtgcagattcaatcaatgactttggtgtcatccacattgcagatccggaaacatggttattccggagatttaaatatagt 4564813  T
Q  299 catatgtataggcatttgtact 320  Q
    ||||||| ||||||||||||||    
T  4564814 catatgtgtaggcatttgtact 4564835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 99 - 325
Target Start/End: Complemental strand, 630799 - 630574
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||| || |||||||||||| ||| |||||||||||||  |||||    
T  630799 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gttcgtctttcttgtttctctcaagtatttgatcggtcaagatt 630701  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||| |||||||||||||||| ||||| |||||||||||||||| ||||||||| |||||| | ||||||||| |||||||| ||||| |||||||||    
T  630700 gtcagaccagcttcgatccagtgcagatctaatcaatgactttgacgtcatccacgttgcagacctggagacatggttattccggagatttaaatatagt 630601  T
Q  299 catatgtataggcatttgtactttgcc 325  Q
    ||||||| ||| ||||||||| |||||    
T  630600 catatgtgtagacatttgtaccttgcc 630574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 38644812 - 38644579
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||  |||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||| || |||||||    
T  38644812 gtgatttcttcgtcttcgtgcgacattggtttgttcgtcgtctttgtgcgacatt-gtttgtttttcttgtttctctcaggtatttgattggctcagatt 38644714  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||||||| |||||||||||| |||| ||||| |||| | ||   ||||||||| ||||||||| |||||||| |||||||| ||||| ||| |||||    
T  38644713 gtcagatcagtttcgatccagtgcagattcaatccatgattgtggagtcatccacgttgcagatccagagacatggttattccggagatttaaaaatagt 38644614  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||||||||||||||||||||||||||    
T  38644613 catatgtgtaggcatttgtactttgccgttttatg 38644579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 132 - 333
Target Start/End: Complemental strand, 6212896 - 6212696
Alignment:
Q  132 ttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaat 231  Q
    ||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| ||||  |||||||||||||||||||| |||| |||||||||    
T  6212896 ttcgtcgtctttgtgcgacatt-gtttgtttttcttgtttctctcaggtatttgatcgattcatgttgtcagatcagcttcgatcaagtgcagatccaat 6212798  T
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    ||||||||||| | ||||||||| || ||||||||||||||| |||||||| ||||| |||||||||||||||  |||||| ||||||||||||||||||    
T  6212797 caatgactttggcgtcatccacgttgtagatccggagacatggttattccggagatttaaatatagtcatatgggtaggcaattgtactttgccgtttta 6212698  T
Q  332 tg 333  Q
    ||    
T  6212697 tg 6212696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 45659146 - 45659345
Alignment:
Q  132 ttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaat 231  Q
    |||||||||||||||||||||| ||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  45659146 ttcgtcgtctttgtgcgacgttggtt-gtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaat 45659244  T
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    ||||||||||||| ||||| ||| || ||||||| | ||||| ||||||| |||||| || ||||||||||||| |||||||||||||||||  ||||||    
T  45659245 caatgactttgacgtcatctacgttgtagatccgaaaacatggttattccaaagatttaagtatagtcatatgtgtaggcatttgtactttggtgtttta 45659344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 132 - 333
Target Start/End: Complemental strand, 14717252 - 14717055
Alignment:
Q  132 ttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaat 231  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  14717252 ttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcagatatttgatcggttcagattgtcagatcagattcgatccagtgcagatccaat 14717154  T
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    ||||||| ||| | ||||||||| |||||||||||||| ||| ||||| || ||||| ||||||||||  |||| |||||| |||||||||| |||||||    
T  14717153 caatgacattggcgtcatccacgttgcagatccggagaaatggttatttcggagatttaaatatagtc--atgtgtaggcaattgtactttg-cgtttta 14717057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 15698299 - 15698530
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| ||| |||||||||| |||| ||||||||| |||||||| |||||||||  |||||||| ||||||||||||| ||||||||||    
T  15698299 gtgatttcgtcgtctttgtgtgacgttggtt-gttcatcgtctttgggcgacgtt-gtttgttttg-ttgtttctctcaggtatttgattggttcagatt 15698395  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||| ||| |||| ||||||||||||||| | ||||||||| |||||||||  | ||||| |||||||||||||| ||| |||||    
T  15698396 gtcagatcagcttcgatccggtgcagattcaatcaatgactttggcgtcatccacgttgcagatccaaaaacatggttattccgaagatttaaaaatagt 15698495  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||||| |||||  |||||||||||||    
T  15698496 catatgtgtaggcaattgtatgttgccgttttatg 15698530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 99 - 305
Target Start/End: Original strand, 28213147 - 28213351
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | |||||| ||||| |||| |||||||||||||||||||||||| || |||||| |||||||||||| ||||||||||| ||||||||||||    
T  28213147 gtgattttgtcgtctttgtgcggcgttagtttgttcgtcgtctttgtgcgacatt-gtttgtctttcttgtttctttcaggtatttgttcggttcagatt 28213245  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||||||| |||||||||||||||||||||||||||||||||   ||||||||| |||| |||||||||| || |||||||| |||||  ||||||||    
T  28213246 gtcagatcagattcgatccagtgtagatccaatcaatgactttggtgtcatccacgttgca-atccggagacttggttattccggagatttgaatatagt 28213344  T
Q  299 catatgt 305  Q
    | |||||    
T  28213345 cgtatgt 28213351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 99 - 239
Target Start/End: Original strand, 23320539 - 23320678
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||  ||||| |||||||||||| ||| ||||||||||||||||||||    
T  23320539 gtgatttcgtcgtcttcgtgtgacgttggtttgttcgtcgtctttgtgcgacgtta-tttgtctttcttgtttctctcatgtatttgatcggttcagatt 23320637  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgact 239  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  23320638 gtcagatcagcttcgatccagtgcagatccaatcaatgact 23320678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 141 - 333
Target Start/End: Complemental strand, 44513975 - 44513784
Alignment:
Q  141 tttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactt 240  Q
    ||||||||||||| |||||| |||||||||||  ||||||||||| ||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  44513975 tttgtgcgacgtt-gtttgtctttcttgtttcgttcaggtatttgttcgattcagattgtcagatcagcttcgatccagtgcagatcaaatcaatgactt 44513877  T
Q  241 tgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||   || || ||| ||||||||||||||||||  ||||||| ||| | |||||||||||||||| ||||| || ||||||||| ||||||||    
T  44513876 tggagtcgtcaacgttgcagatccggagacatgggtattccggagacttaaatatagtcatatgtgtaggctttagtactttgctgttttatg 44513784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 99 - 332
Target Start/End: Original strand, 11121075 - 11121307
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| |||||| ||||  ||||||||| ||||||||| ||||| |||||| ||||||||||   ||| ||||||| ||||||||||||    
T  11121075 gtgatttcgtcgtcttagtgcgaggttgtgttgttcgtcatctttgtgcaacgtt-gtttgtctttcttgttttgttcatgtatttgttcggttcagatt 11121173  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||   || || ||  |||||||||||||||||   ||||||| ||||| ||||| |||    
T  11121174 gtcagatcagcttcgatccagtgcagatcaaatcaatgactttggagtcttcaacattgcagatccggagacatatgtattccggagatttaaatacagt 11121273  T
Q  299 catatgtataggcatttgtactttgccgttttat 332  Q
    ||||||| ||||| |  |||||||| ||||||||    
T  11121274 catatgtgtaggcctgagtactttgtcgttttat 11121307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 100 - 333
Target Start/End: Complemental strand, 13969657 - 13969422
Alignment:
Q  100 tgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt--tgtttgtttttcttgtttctatcaggtatttgatcggttcagat 197  Q
    |||||||  |||||| |||||||||||   ||||||||||||||||||| | ||  | ||||| ||| ||||||   ||| ||||||| |||||||| ||    
T  13969657 tgatttcatcgtcttagtgcgacgttgtgatgttcgtcgtctttgtgcggcattattttttgtctttattgttttgttcaagtatttgttcggttcaaat 13969558  T
Q  198 tgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatag 297  Q
    ||||| |||||||| ||||||||| |||||||||||||||||||||| || || ||| ||||||||||||||||||| ||||| | | | |  |||||||    
T  13969557 tgtcaaatcagcttagatccagtgcagatccaatcaatgactttgacgtcgtcaacgttgcagatccggagacatgagtattctggaaacttgaatatag 13969458  T
Q  298 tcatatgtataggcatttgtactttgccgttttatg 333  Q
    | |||||||||||| |||||||||||||||||||||    
T  13969457 taatatgtataggcttttgtactttgccgttttatg 13969422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 33703525 - 33703292
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| || || ||||| |||||| ||||||||||||||||||| |||||| |||||||||||  ||| ||||||| | | ||||||||    
T  33703525 gtgatttcgtcgtcttagtacggcgttgttttgtttgtcgtctttgtgcgacgtt-gtttgtctttcttgtttcgttcacgtatttgtttgattcagatt 33703427  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||||||| || ||||||||||||||| ||||||||||||||    | || ||| || ||||||| |||||||  ||||||  ||| | |||||||||    
T  33703426 gtcagatcaggtttgatccagtgtagatcaaatcaatgactttggagccgtcaacgttggagatccgtagacatggatattccagagacttaaatatagt 33703327  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||| || ||||||||||||||||||    
T  33703326 catatgtgtaggctttagtactttgccgttttatg 33703292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 49651943 - 49652167
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||||||| |||||| ||||||||||||||||||| ||||||| |||||| |||||||||||| ||| ||| ||||||| |           
T  49651943 gtgatttcgtcgtcttcgtgtgacgttcgtttgttcgtcgtctttgtacgacgtt-gtttgtctttcttgtttctctcaagtaattgatcgtt------- 49652034  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
      |||||||||||||||||| || | |||||||||||||||||| | ||||| ||  ||||||||| |||||||| |||| | | ||||| |||||||||    
T  49652035 --cagatcagcttcgatccaatgcaaatccaatcaatgactttggcgtcatctacattgcagatcctgagacatggttatcctggagatttaaatatagt 49652132  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||||||||||| |||| ||||||||    
T  49652133 catatgtgtaggcatttgtaccttgctgttttatg 49652167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 52839629 - 52839862
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | |||||| ||||||||||| |||||||||| |||||||| |||||| |||||| |||||||||||  ||||||||||| || | |||||||    
T  52839629 gtgattttgtcgtcttagtgcgacgttgttttgttcgtcatctttgtgagacgtt-gtttgtctttcttgtttcgttcaggtatttgttcagctcagatt 52839727  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||   || || ||| |||| ||| |||||||||  |||| || | | | || ||||||    
T  52839728 gtcagatcagcttcgatccagtgcagatcaaatcaatgactttggagtcgtcaacgttgcaaatctggagacatgggtatttcggaaacttaactatagt 52839827  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    | ||||| ||||| || ||||||||||||||||||    
T  52839828 cgtatgtgtaggctttagtactttgccgttttatg 52839862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 8893392 - 8893624
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||  |||||| || |||| |||  ||| |||||||||||||| | |||| |||||| ||||||||||   ||||||||||| ||||||||||||    
T  8893392 gtgatttcatcgtcttagtacgacattgtgttgctcgtcgtctttgtgaggcgtt-gtttgtctttcttgttttgttcaggtatttgttcggttcagatt 8893490  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
     |||||||||||| ||||||||| | |||||||||||||||||||| || || ||| || ||||||||||||||   ||||||| |||||| ||||||||    
T  8893491 ttcagatcagcttagatccagtgcaaatccaatcaatgactttgacgtcgtcaacgttgtagatccggagacataggtattccggagattg-aatatagt 8893589  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||| |||||||| ||  ||||||||    
T  8893590 catatgtgtaggcttttgtactctgttgttttatg 8893624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 27469723 - 27469490
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| ||||||||||| ||||||| |||||||||||||||||| |||||| |||||||||||  ||||||| ||| ||  || |||||    
T  27469723 gtgatttcgtcgtcttagtgcgacgttgttttgttcatcgtctttgtgcgacgtt-gtttgtctttcttgtttcgttcaggtaattgttcaatttagatt 27469625  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| ||||| |||||||| |||||   || || ||| ||||||||||||||||||  |||||   ||| | |||||||||    
T  27469624 gtcagatcagcttcgatccagtgcagatcaaatcaatggctttggagtcgtcaacgttgcagatccggagacatggatattctagagagttaaatatagt 27469525  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    |||| || ||||| ||  ||||||| | |||||||    
T  27469524 cataagtgtaggctttaatactttgtcattttatg 27469490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 110 - 333
Target Start/End: Complemental strand, 33177601 - 33177380
Alignment:
Q  110 gtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagc 209  Q
    ||||| |||||||||||  ||||||| ||||||||||| ||||| |||||| ||| ||||||   ||| ||||||| ||||||||||||||||||||| |    
T  33177601 gtcttagtgcgacgttgtgttgttcgccgtctttgtgcaacgtt-gtttgtgttt-ttgttttgttcatgtatttgttcggttcagattgtcagatcaac 33177504  T
Q  210 ttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtatag 309  Q
    || ||||||||| ||||||||||||||||||||   || || ||  |||| |||||||||||||| ||||  | ||| |  ||||||||||||||| |||    
T  33177503 ttagatccagtgcagatccaatcaatgactttggtgtcgtcaacattgcaaatccggagacatgagtattatggagacttgaatatagtcatatgtgtag 33177404  T
Q  310 gcatttgtactttgccgttttatg 333  Q
    || |||||||||||||||||||||    
T  33177403 gcttttgtactttgccgttttatg 33177380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 100 - 333
Target Start/End: Original strand, 26199680 - 26199912
Alignment:
Q  100 tgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattg 199  Q
    |||||||  |||||| ||||||| ||| |||||||||||||||||||||||||| |||| | |||||||||||  ||||||||||| ||| ||||| |||    
T  26199680 tgatttcatcgtcttagtgcgacattgttttgttcgtcgtctttgtgcgacgtt-gtttatctttcttgtttcgttcaggtatttgttcgattcaggttg 26199778  T
Q  200 tcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtc 299  Q
    |||||||||||||||||||||  | ||| |||||||||||||||  || || ||| |||||||||| ||||||   ||||  | ||| | ||||||||||    
T  26199779 tcagatcagcttcgatccagtacaaatcaaatcaatgactttgaagtcgtcaacgatgcagatccgaagacatacgtattatggagacttaaatatagtc 26199878  T
Q  300 atatgtataggcatttgtactttgccgttttatg 333  Q
    |||||| ||||| ||  |||||||  ||||||||    
T  26199879 atatgtgtaggctttaatactttgttgttttatg 26199912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 132 - 332
Target Start/End: Original strand, 40992440 - 40992629
Alignment:
Q  132 ttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaat 231  Q
    |||||| |||| |||||||||| |||||| |||||||||||| ||||||||||||||||||          ||| || ||||||||  ||||||| ||||    
T  40992440 ttcgtcatcttcgtgcgacgtt-gtttgtgtttcttgtttctctcaggtatttgatcggtt----------gattagtttcgatccgatgtagatgcaat 40992528  T
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    ||||||||||| | ||||||||| ||||||||||||||||||| ||||||| | ||| ||||||| |||||||| ||||||||||||||||| |||||||    
T  40992529 caatgactttggcgtcatccacgttgcagatccggagacatgaatattccggatatttaaatataatcatatgtgtaggcatttgtactttgtcgtttta 40992628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 2350721 - 2350954
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgt-ttttcttgtttctatcaggtatttgatcggttcagat 197  Q
    ||||||| | |||||| ||||||||||| |||||| ||||||| ||||||||||| |||||| |||||   ||| | |||||| |||| ||||||| |||    
T  2350721 gtgatttagtcgtcttagtgcgacgttgttttgttggtcgtctctgtgcgacgtt-gtttgtcttttcccttttgt-tcaggtgtttgttcggttcggat 2350818  T
Q  198 tgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatag 297  Q
    |||||||| |||||| |||||||| | |||||| ||||||||||| | ||||| ||| |||||||||| || |||   ||||||| |||||  |||||||    
T  2350819 tgtcagattagcttcaatccagtgcaaatccaaccaatgactttggcgtcatcaacgttgcagatccgaaggcatagctattccggagattttaatatag 2350918  T
Q  298 tcatatgtataggcatttgtactttgccgttttatg 333  Q
    |||||| | ||||| |||||||||||||||||||||    
T  2350919 tcatatttgtaggcttttgtactttgccgttttatg 2350954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 116 - 263
Target Start/End: Original strand, 10264825 - 10264971
Alignment:
Q  116 gtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgat 215  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||  ||||||||||| ||| ||||||||||||||||| ||||||     
T  10264825 gtgcgacgttggtttgttcgtcgtctttgtgcaacgtt-gtttgtttttcttttttcgttcaggtatttgttcgattcagattgtcagatcaacttcgag 10264923  T
Q  216 ccagtgtagatccaatcaatgactttgacatcatccacgctgcagatc 263  Q
     || || | ||||||||||| |||||||| || |||||| ||||||||    
T  10264924 tcattgcaaatccaatcaataactttgacgtcgtccacgttgcagatc 10264971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 12148063 - 12147830
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    |||||| || |||||| ||| ||| ||| ||||||||| || ||||||| || || |||||| |||||||||||  ||||||||||| ||| ||||||||    
T  12148063 gtgattccgtcgtcttagtgtgactttgttttgttcgttgtttttgtgcaacatt-gtttgtctttcttgtttcgttcaggtatttgttcgattcagatt 12147965  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||| |||||||| |||| ||||  ||  ||||||||||   || || ||| |||| |||||||||||||  ||||||| ||| | || ||||||    
T  12147964 gtcagatcaacttcgatctagtgcagataaaaagaatgactttggagtcgtcaacgttgcaaatccggagacatgggtattccggagacttaagtatagt 12147865  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||| || |||||||| |||||||||    
T  12147864 catatgtgtaggctttagtactttgtcgttttatg 12147830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 99 - 331
Target Start/End: Original strand, 47392237 - 47392466
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    |||||||| | ||||| | | ||||||||||||||||||||||||||||| |||| |||||| ||| |||||||  |||| |||||| |||||| || ||    
T  47392237 gtgatttcactgtcttagcgtgacgttggtttgttcgtcgtctttgtgcggcgtt-gtttgtcttt-ttgtttcgttcagatatttgttcggtttaggtt 47392334  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagaca-tgattattccgaagattgaaatatag 297  Q
     |||||||||||| ||||||||||||||||||| |||||||||| | || |||||| || ||||||| ||||| || || ||| | ||| |  |||||||    
T  47392335 ttcagatcagctt-gatccagtgtagatccaataaatgactttggcgtcgtccacgttgtagatccgaagacattggttcttcag-agacttgaatatag 47392432  T
Q  298 tcatatgtataggcatttgtactttgccgtttta 331  Q
    |||||||| || || ||||||||||| |||||||    
T  47392433 tcatatgtgtatgcttttgtactttgtcgtttta 47392466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 118 - 323
Target Start/End: Complemental strand, 48655037 - 48654833
Alignment:
Q  118 gcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatcc 217  Q
    |||||||||||||||||||||||||||| | ||||| |||||| ||| |||||||  ||| ||||||| |  ||||||||||||| || ||||||||| |    
T  48655037 gcgacgttggtttgttcgtcgtctttgtacaacgtt-gtttgtctttattgtttcgttcatgtatttgtttagttcagattgtcatattagcttcgattc 48654939  T
Q  218 agtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgt 317  Q
    |||| |||||||||||||||||||| | |||| || | |||||||||| | |||||| |||| | || | | ||||||| |||||||  ||||| ||||     
T  48654938 agtgcagatccaatcaatgactttggcgtcattcatgttgcagatccgaaaacatgaatatttcaaaaagttaaatataatcatatgcgtaggcttttgc 48654839  T
Q  318 actttg 323  Q
    ||||||    
T  48654838 actttg 48654833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 110 - 242
Target Start/End: Complemental strand, 22032095 - 22031964
Alignment:
Q  110 gtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagc 209  Q
    ||||| |||||| ||||||||||||||||||||| || | |||| |||||  |||||||||||  || |||||||| || ||||| ||||||||| |||     
T  22032095 gtcttagtgcgatgttggtttgttcgtcgtctttatgtggcgtt-gtttgcctttcttgtttcgttccggtatttgttcagttcatattgtcagaccagt 22031997  T
Q  210 ttcgatccagtgtagatccaatcaatgactttg 242  Q
    |||||||||||||||||||||||||||||||||    
T  22031996 ttcgatccagtgtagatccaatcaatgactttg 22031964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 99 - 242
Target Start/End: Complemental strand, 32539205 - 32539062
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttg-atcggttcagat 197  Q
    ||||||| | |||||| || ||||||||||||||||||||||||||||||||| |||||||||||| ||||||    || |||||||  | |||||||||    
T  32539205 gtgattttgtcgtcttagtacgacgttggtttgttcgtcgtctttgtgcgacg-ttgtttgtttttattgttttgtccatgtatttgttttggttcagat 32539107  T
Q  198 tgtcagatcagcttcgatccagtgtagatccaatcaatgactttg 242  Q
    ||||||||| |||||||| ||||| | ||||||||||||||||||    
T  32539106 tgtcagatctgcttcgattcagtgcaaatccaatcaatgactttg 32539062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 214 - 333
Target Start/End: Original strand, 1768140 - 1768259
Alignment:
Q  214 atccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcat 313  Q
    |||||||||| ||| |||||||||||||||| | ||||||  |||||||||| | ||||| |||||| | ||||| ||| |||||||||| | |||||||    
T  1768140 atccagtgtatatctaatcaatgactttgacgttatccacattgcagatccgtaaacatggttattcaggagatttaaacatagtcatatttgtaggcat 1768239  T
Q  314 ttgtactttgccgttttatg 333  Q
    ||||||||||||||||||||    
T  1768240 ttgtactttgccgttttatg 1768259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 182 - 333
Target Start/End: Complemental strand, 34659574 - 34659423
Alignment:
Q  182 tttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattcc 281  Q
    |||| |||||||||||||||| |||||||| |||||| || |||||||||||||||||||| | || || ||  |||||||||||||| |||  ||||||    
T  34659574 tttgttcggttcagattgtcatatcagcttagatccaatgcagatccaatcaatgactttggcgtcgtcaacattgcagatccggagatatgggtattcc 34659475  T
Q  282 gaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
     |||| |  |||||||||||| || ||||| ||| ||||||||| |||||||    
T  34659474 aaagacttgaatatagtcataagtgtaggcttttttactttgccattttatg 34659423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 132 - 273
Target Start/End: Original strand, 900226 - 900365
Alignment:
Q  132 ttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaat 231  Q
    |||||||||||||||| ||  |||||||| ||| |||||||   ||| ||| || |||||||||||||||| |||| ||| |||||||||  ||||||||    
T  900226 ttcgtcgtctttgtgcaac--ttgtttgtcttttttgtttcgtccagatatctgttcggttcagattgtcatatcaactttgatccagtgcggatccaat 900323  T
Q  232 caatgactttgacatcatccacgctgcagatccggagacatg 273  Q
    ||||||||||||| ||||||||| || |||||| ||||||||    
T  900324 caatgactttgacgtcatccacgttgtagatccagagacatg 900365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 175 - 333
Target Start/End: Complemental strand, 13691703 - 13691545
Alignment:
Q  175 tcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatga 274  Q
    |||||| |||| ||| |||||||||||| |||| |||||||| |||| | ||||||  |||||||||||| ||||| ||| |||||||| |||| |||||    
T  13691703 tcaggtgtttgttcgattcagattgtcaaatcatcttcgatctagtgcaaatccaactaatgactttgacgtcatcaacgttgcagatctggaggcatga 13691604  T
Q  275 ttattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
     ||||||  |||||  ||||||||||||| | ||||| | |||| ||||||||||||||    
T  13691603 ctattccagagattttaatatagtcatatttgtaggcttatgtattttgccgttttatg 13691545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 10877445 - 10877679
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| | |||| ||||||||||| ||||||||| ||||||||| | |||| |||||| |||||||||||  | | ||||| | |||||||| |||    
T  10877445 gtgatttcgtcatcttagtgcgacgttgttttgttcgttgtctttgtgtggcgtt-gtttgtctttcttgtttcatttatgtattggttcggttcatatt 10877543  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgacttt-gacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatag 297  Q
    |||| ||||  ||| |||||||| |||| |||||||||||||| | | ||  | ||| || | ||| |||||||||  ||||||  ||| |  ||| |||    
T  10877544 gtcatatcattttcaatccagtgcagattcaatcaatgactttggccgtcggcaacgttgtaaatctggagacatgtgtattccagagaattgaatgtag 10877643  T
Q  298 tcatatgtataggcatttgtactttgccgttttatg 333  Q
    |||||||| ||||| ||||||||||| |||||||||    
T  10877644 tcatatgtgtaggcttttgtactttgtcgttttatg 10877679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 333
Target Start/End: Original strand, 46589279 - 46589480
Alignment:
Q  132 ttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtg-tagatccaa 230  Q
    ||||||||||||||||| || | |||||| |||||||||||  ||| ||||||| |||||||||||||||||||||| ||| || |||||  | ||| |     
T  46589279 ttcgtcgtctttgtgcggcggt-gtttgtctttcttgtttcgctcaagtatttgttcggttcagattgtcagatcagtttcaattcagtgcaaaatcaat 46589377  T
Q  231 tcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttt 330  Q
    ||||||||||||   || || ||| |||||||||||| |||||| |||| |  ||| | ||||||| |||||||| ||| | || |||||||| ||||||    
T  46589378 tcaatgactttggagtcctcaacgttgcagatccggacacatgagtatttcagagacttaaatatactcatatgtgtagactttagtactttgtcgtttt 46589477  T
Q  331 atg 333  Q
    |||    
T  46589478 atg 46589480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 271
Target Start/End: Complemental strand, 37685105 - 37684934
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| | |||||| ||  ||  |||||||||||||  |||||| |||||| |||||||||||  |||  |||||| | | ||||||||    
T  37685105 gtgatttcgtcgtcttagcgcgacggtgtcttaatcgtcgtctttgtatgacgtt-gtttgtctttcttgtttcgttcaaatatttgtttgattcagatt 37685007  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagaca 271  Q
    ||||||||||||||||||||||| ||||  ||| ||||||||||   || || ||| ||||||||||||||||    
T  37685006 gtcagatcagcttcgatccagtgcagattaaattaatgactttggagtcgtcaacgttgcagatccggagaca 37684934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 271
Target Start/End: Original strand, 37700412 - 37700583
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| | |||||| ||  ||  |||||||||||||  |||||| |||||| |||||||||||  |||  |||||| | | ||||||||    
T  37700412 gtgatttcgtcgtcttagcgcgacggtgtcttaatcgtcgtctttgtatgacgtt-gtttgtctttcttgtttcgttcaaatatttgtttgattcagatt 37700510  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagaca 271  Q
    ||||||||||||||||||||||| ||||  ||| ||||||||||   || || ||| ||||||||||||||||    
T  37700511 gtcagatcagcttcgatccagtgcagattaaattaatgactttggagtcgtcaacgttgcagatccggagaca 37700583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 214 - 333
Target Start/End: Original strand, 26771319 - 26771438
Alignment:
Q  214 atccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcat 313  Q
    |||||||| ||||||||||||| |||||||  || || ||| |||||||||| |||||||| |||| || ||| |  ||||||||||||||| ||||| |    
T  26771319 atccagtgcagatccaatcaataactttgatgtcgtcaacgttgcagatccgaagacatgaatatttcggagacttgaatatagtcatatgtgtaggctt 26771418  T
Q  314 ttgtactttgccgttttatg 333  Q
    |||||||||| |||||||||    
T  26771419 ttgtactttgtcgttttatg 26771438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 111 - 333
Target Start/End: Original strand, 29067160 - 29067379
Alignment:
Q  111 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagct 210  Q
    |||| ||||||||||| ||||||||||||||||||||  |||| |||||| ||||||||||   ||| ||||||  |||||||| ||| |||||||||||    
T  29067160 tcttagtgcgacgttgttttgttcgtcgtctttgtgcagcgtt-gtttgtctttcttgttttgttcaagtatttattcggttcaaattttcagatcagct 29067258  T
Q  211 tcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattc-cgaagattgaaatatagtcatatgtatag 309  Q
    |||||| |||| | || ||||||||| ||||| | || |  |   ||||||||| ||||||||  |||||  || | |||||| |||||||||||| |||    
T  29067259 tcgatcaagtgcaaattcaatcaatg-ctttggcgtcgt-taatttgcagatcctgagacatggatattctggaggcttgaaa-atagtcatatgtgtag 29067355  T
Q  310 gcatttgtactttgccgttttatg 333  Q
    || ||||||||||| |||||||||    
T  29067356 gcttttgtactttgtcgttttatg 29067379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 34566787 - 34567013
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgttttt--cttgtttctatcaggtatttgatcggttcaga 196  Q
    ||||||||| |||||| |||||||  || |||||| ||||||||||||||||||| |||||| |||  | || ||| |    || |||| ||| ||||||    
T  34566787 gtgatttcgtcgtcttagtgcgaccctgttttgtttgtcgtctttgtgcgacgtt-gtttgtcttttccctggttcaa----gtgtttgttcgattcaga 34566881  T
Q  197 ttgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatata 296  Q
    |||||||||||| |||||||||||| |||||||| ||||||||||| | ||||  |||      || ||||| ||||  |||| || |||||  ||||||    
T  34566882 ttgtcagatcagtttcgatccagtgcagatccaaccaatgactttggcgtcattaacg-----tattcggaggcatggctatttcggagattttaatata 34566976  T
Q  297 gtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| | ||||| | |||||||||||||||||||    
T  34566977 gtcatatttgtaggcttatgtactttgccgttttatg 34567013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 1768065 - 1768135
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgttt 171  Q
    ||||||||| |||||||||| |||||||||| ||||||||||||||||||||  |||||||||||||||||||    
T  1768065 gtgatttcgtcgtcttcgtgtgacgttggtt-gttcgtcgtctttgtgcgac-attgtttgtttttcttgttt 1768135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 230 - 333
Target Start/End: Original strand, 12871850 - 12871953
Alignment:
Q  230 atcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttt 329  Q
    ||||||||||||| |||| || ||| ||||||||| ||||||||| ||||||| ||| |  ||||||||||||  | ||||||| ||||||||| |||||    
T  12871850 atcaatgactttggcatcgtcaacgttgcagatccagagacatgagtattccggagacttgaatatagtcatacttgtaggcatatgtactttgtcgttt 12871949  T
Q  330 tatg 333  Q
    ||||    
T  12871950 tatg 12871953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 333
Target Start/End: Original strand, 47551312 - 47551427
Alignment:
Q  218 agtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgt 317  Q
    |||| |||||||||||||||||||||| || || ||| |||||||||||| |||||| ||||| | ||| |  ||||||||||||| | |||||||   |    
T  47551312 agtgcagatccaatcaatgactttgacgtcgtcaacgttgcagatccggaaacatgagtattctggagacttgaatatagtcatatttgtaggcatagat 47551411  T
Q  318 actttgccgttttatg 333  Q
    |||||||| |||||||    
T  47551412 actttgccattttatg 47551427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 52752122 - 52752185
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttt 163  Q
    ||||||| | ||||||||| |||| |||||||||||||||||||||||||||| |||||||||||    
T  52752122 gtgattttgtcgtcttcgtacgacattggtttgttcgtcgtctttgtgcgacg-ttgtttgtttt 52752185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 333
Target Start/End: Original strand, 8224355 - 8224506
Alignment:
Q  182 tttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattcc 281  Q
    |||| ||||||||||||||| |||||| |||||||| ||| | ||| ||| |||||||||| | || || ||| ||||||||  ||| ||||| |||| |    
T  8224355 tttgttcggttcagattgtctgatcagattcgatcccgtgcatatctaattaatgactttggcgtcgtcaacgatgcagatctagaggcatgagtatttc 8224454  T
Q  282 gaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    | |||||  |||||||||| || |  |||| ||| ||||||| |||||||||    
T  8224455 ggagatttgaatatagtcaaatttgcaggcttttatactttgtcgttttatg 8224506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 333
Target Start/End: Original strand, 32878925 - 32879040
Alignment:
Q  218 agtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgt 317  Q
    |||| |||||| |||||||||||||   || || ||| || |||||||||||||||| ||||||||| | |  ||||||||||||| | |||||||  ||    
T  32878925 agtgcagatccgatcaatgactttggtgtcgtcaacgttgtagatccggagacatgagtattccgaaaacttgaatatagtcatatttgtaggcataagt 32879024  T
Q  318 actttgccgttttatg 333  Q
    |||||| |||||||||    
T  32879025 actttgtcgttttatg 32879040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 332
Target Start/End: Complemental strand, 9298320 - 9298206
Alignment:
Q  218 agtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgt 317  Q
    |||| |||||| ||||||||||||| |||| || ||| |||||||||||||| |||| |||| || ||| |  |||||| |||||| |||||||||  ||    
T  9298320 agtgcagatccgatcaatgactttggcatcgtcaacgatgcagatccggagatatgagtatttcggagacttgaatataatcatatttataggcataggt 9298221  T
Q  318 actttgccgttttat 332  Q
    |||||| | ||||||    
T  9298220 actttgtcattttat 9298206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 153
Target Start/End: Complemental strand, 40488412 - 40488358
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt 153  Q
    ||||||||| |||||| ||||||||||| |||||| |||||||||||||||||||    
T  40488412 gtgatttcgtcgtcttagtgcgacgttgttttgtttgtcgtctttgtgcgacgtt 40488358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 219 - 333
Target Start/End: Complemental strand, 40862722 - 40862608
Alignment:
Q  219 gtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgta 318  Q
    ||||| || |||||||||| |||| | || || ||| ||||||||| ||||||||| ||||| ||||| | |||||||||||||| | |||||||  |||    
T  40862722 gtgtaaatgcaatcaatgattttggcgtcgtcaacgttgcagatccagagacatgagtattctgaagactaaaatatagtcatatttgtaggcataagta 40862623  T
Q  319 ctttgccgttttatg 333  Q
    || || |||||||||    
T  40862622 ctctgtcgttttatg 40862608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 333
Target Start/End: Original strand, 18343849 - 18343950
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    ||||||||||| | || || ||| |||||||||||||||||||  |||||| ||| |  ||||||||||||| | |||||||  |||| |||||||||||    
T  18343849 caatgactttggcgtcgtcaacgttgcagatccggagacatgaggattccggagacttgaatatagtcatatttgtaggcatgggtaccttgccgtttta 18343948  T
Q  332 tg 333  Q
    ||    
T  18343949 tg 18343950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 303
Target Start/End: Original strand, 45750715 - 45750786
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatat 303  Q
    ||||||||||| | ||||| ||| ||||||||||||||||||| |||||||||||   ||||||||| ||||    
T  45750715 caatgactttggcgtcatcaacgttgcagatccggagacatgagtattccgaagacaaaaatatagttatat 45750786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 303
Target Start/End: Original strand, 10304795 - 10304880
Alignment:
Q  218 agtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatat 303  Q
    |||| |||| ||||||||||||||  |||| || ||| ||||||| ||||||||||  ||||||||||| |  |||||||||||||    
T  10304795 agtggagattcaatcaatgactttagcatcgtcaacgttgcagattcggagacatggatattccgaagacttgaatatagtcatat 10304880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 284
Target Start/End: Original strand, 30678474 - 30678538
Alignment:
Q  220 tgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaa 284  Q
    |||||||||||||||||| |||| | || || || ||||| ||||| ||||||||||||||||||    
T  30678474 tgtagatccaatcaatgattttggcgtcgtcaacactgcaaatccgaagacatgattattccgaa 30678538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 37662403 - 37662451
Alignment:
Q  194 agattgtcagatcagcttcgatccagtgtagatccaatcaatgactttg 242  Q
    ||||||| ||||||||||||||| |||| |||||||| |||||||||||    
T  37662403 agattgttagatcagcttcgatctagtgcagatccaaccaatgactttg 37662451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 218 - 333
Target Start/End: Original strand, 13152657 - 13152772
Alignment:
Q  218 agtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgt 317  Q
    |||| |||||| ||||||||||||| | ||||| ||| | ||||||  ||||||| | ||||||| |||    | ||||||| ||| | ||||||| |||    
T  13152657 agtgcagatccgatcaatgactttggcgtcatcaacgttacagatcaagagacataagtattccggagacatgattatagtcgtatttgtaggcatatgt 13152756  T
Q  318 actttgccgttttatg 333  Q
    ||||||||||||||||    
T  13152757 actttgccgttttatg 13152772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 280
Target Start/End: Original strand, 29938449 - 29938516
Alignment:
Q  213 gatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattc 280  Q
    |||| |||| |||||||||||||||||||| | | ||| ||| |||| |||||||||||||| |||||    
T  29938449 gatcaagtgcagatccaatcaatgactttggcgttatcaacgttgcaaatccggagacatgagtattc 29938516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 153
Target Start/End: Original strand, 48750142 - 48750195
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt 153  Q
    |||||||||| ||||| |||||||||||  |||||||||||| ||||||||||||    
T  48750142 gtgatttcgctgtcttagtgcgacgttgtgttgttcgtcgtc-ttgtgcgacgtt 48750195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 22031951 - 22031882
Alignment:
Q  266 gagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatgat 335  Q
    ||||||||| ||||||| ||| |  |||||| |||||||| ||| | ||||||||||| |||||||||||    
T  22031951 gagacatgagtattccggagacttgaatataatcatatgtgtagacttttgtactttgtcgttttatgat 22031882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 277
Target Start/End: Original strand, 29205522 - 29205567
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgatta 277  Q
    ||||||||||| | ||||| ||| ||||||||||||||||||||||    
T  29205522 caatgactttggcgtcatcaacgttgcagatccggagacatgatta 29205567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 44562862 - 44562825
Alignment:
Q  1 agggtcaatttttggcacaaaatcacccctctaactcg 38  Q
    |||||||||||||| | |||||||||||||||||||||    
T  44562862 agggtcaatttttgacccaaaatcacccctctaactcg 44562825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 274
Target Start/End: Original strand, 2486129 - 2486185
Alignment:
Q  218 agtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatga 274  Q
    |||| |||| |||| ||||||||| || ||||| ||| |||||||||||||||||||    
T  2486129 agtgcagattcaattaatgacttttacgtcatcaacgttgcagatccggagacatga 2486185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 163; Significance: 5e-87; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 5541 - 5308
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||| |||    
T  5541 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtctttcttgtttctctcaggtatttgatcggttcatatt 5443  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||| |||||||||||||||||| |||||||||||||||||||| | ||||||||| ||||||||||||||||||  ||||||| ||||| |||||||||    
T  5442 gtcatatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggagacatggctattccggagatttaaatatagt 5343  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||||| |||||| |||||||||||||    
T  5342 catatgtgtaggcacttgtaccttgccgttttatg 5308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 163; Significance: 5e-87; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 12218 - 11985
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  12218 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgatcggttcagatt 12120  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||||||||||||||  |||| |||||||||||||||||||| | ||||||||| |||||||||||||||||| |||||||| ||||| |||||||||    
T  12119 gtcagatcagcttcgatttagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggagacatggttattccggagatttaaatatagt 12020  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    || |||  ||||||||||||||||| | |||||||    
T  12019 cacatgcgtaggcatttgtactttgtcattttatg 11985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 163; Significance: 5e-87; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 111 - 333
Target Start/End: Original strand, 7049356 - 7049577
Alignment:
Q  111 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagct 210  Q
    ||||||||||||||||||||  || ||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  7049356 tcttcgtgcgacgttggtttcgtcatcgtctttgtgagacgtt-gtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatcaact 7049454  T
Q  211 tcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtatagg 310  Q
    ||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||| ||||    
T  7049455 tcgatccagtgcagatgcaatcaatgactttgacatcatccacgttgcagatccggagatatgattattccgaagatttaaatatagtcatatgtgtagg 7049554  T
Q  311 catttgtactttgccgttttatg 333  Q
    ||||||||||||| |||||||||    
T  7049555 catttgtactttgtcgttttatg 7049577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 23843439 - 23843206
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| | ||||||||||||||||||||||    
T  23843439 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtctttcttgtttctcttaggtatttgatcggttcagatt 23843341  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| |||| ||||||||||||||| | ||||||||| ||||||||||||||||||  ||||||| ||||| |||||||||    
T  23843340 gtcagatcagcttcgatccagtgcagattcaatcaatgactttggcgtcatccacgttgcagatccggagacatggctattccggagatttaaatatagt 23843241  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||| | ||||||||||||| |||||||||||||    
T  23843240 catatatgtaggcatttgtaccttgccgttttatg 23843206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 13234123 - 13233890
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||    
T  13234123 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgatcggttcaaatt 13234025  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||||||| ||||||| |||| ||||||||||||||| |||| | ||||||||| |||||||||||||||||| |||||||| ||||| |||||||||    
T  13234024 gtcagatcagtttcgatctagtgcagatccaatcaatgattttggcgtcatccacgttgcagatccggagacatggttattccggagatttaaatatagt 13233925  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||||  |||| |||| |||||||||    
T  13233924 catatgtgtaggcaactgtattttgtcgttttatg 13233890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 12576495 - 12576263
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    |||||| || |||||| ||| |||||||||| ||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||| ||||||||    
T  12576495 gtgattccgtcgtctttgtgtgacgttggtt-gttcgtcgtctttgtgcgacgtt-gtttgttttccttgtttctctcaggtatttgatcgcttcagatt 12576398  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| |||||||||||||||||||| | ||||||||| |||||||||||| ||||| |||||||| ||||| |||||||||    
T  12576397 gtcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagt 12576298  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||||||||||| ||| |||||||||    
T  12576297 catatgtgtaggcatttgtaccttgtcgttttatg 12576263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 19759887 - 19760120
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| | |||||| ||||||||||||||||| |||||||||||||||||| |||||| |||||||||||| ||| ||||||||||||||||||||    
T  19759887 gtgatttcgtcatcttcgagcgacgttggtttgttcatcgtctttgtgcgacgtt-gtttgtatttcttgtttctctcatgtatttgatcggttcagatt 19759985  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||||||| |||||||||||| |||||||||||||||||||| | ||||||||| ||||||||||||||||||  ||||||| ||||| |||||||||    
T  19759986 gtcagatcagtttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggagacatggctattccggagatttaaatatagt 19760085  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    |||||||  || ||||||||| ||||| |||||||    
T  19760086 catatgtgcagacatttgtaccttgccattttatg 19760120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 111 - 333
Target Start/End: Original strand, 20845119 - 20845340
Alignment:
Q  111 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagct 210  Q
    |||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||    
T  20845119 tcttcgtgcgacattggtttgttcgtcgtctttgtgcgacgct-gtttgtttttcttgtttctctcagatatttgatcggttcagattgtcagatcaact 20845217  T
Q  211 tcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtatagg 310  Q
    ||||||||||| |||||||||||||||||| | | ||||||||| |||| |||| || ||||| |||||||| | ||| |||||||||||||| | |||     
T  20845218 tcgatccagtgcagatccaatcaatgacttcggcgtcatccacgttgcaaatccagaaacatggttattccggatatttaaatatagtcatatttgtaga 20845317  T
Q  311 catttgtactttgccgttttatg 333  Q
    ||||||||||||| |||||||||    
T  20845318 catttgtactttgtcgttttatg 20845340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 16913427 - 16913657
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||| |||| ||||| |||||||||||| |||||||||||| |||||| ||| |||||||||| |||||||||    
T  16913427 gtgatttcgtcgtcttcgtgcgacgttggtt-gttcatcgtccttgtgcgacgtt-gtttgtttttct-gtttctctcatgtatttgatctgttcagatt 16913523  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||||||| ||| || ||||| |||||||||||||||||| | | ||||||||| |||||||||||| | |||||||||||| | ||| |||||||||    
T  16913524 gtcagatcagtttcaatacagtgcagatccaatcaatgacttgg-cgtcatccacgttgcagatccggaaagatgattattccggatatttaaatatagt 16913622  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||||||||||||||||||||||||||    
T  16913623 catatgtgtaggcatttgtactttgccgttttatg 16913657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 11426041 - 11426277
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| | ||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||  ||||||||    
T  11426041 gtgatttcgtcatcttcgtgcgatgttggtt-gttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgatctcttcagatt 11426138  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatat--- 295  Q
    ||||||||||||||||||||||| |||| ||||||||||||||| | ||||||||| || ||||||| | ||||| |||||||| ||||| ||||||       
T  11426139 gtcagatcagcttcgatccagtgcagattcaatcaatgactttggcgtcatccacgttgtagatccgaaaacatggttattccggagatttaaatatagt 11426238  T
Q  296 -agtcatatgtataggcatttgtactttgccgttttatg 333  Q
     |||||||||| |||||||||||||||||  ||||||||    
T  11426239 cagtcatatgtgtaggcatttgtactttgttgttttatg 11426277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 99 - 299
Target Start/End: Complemental strand, 548881 - 548682
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||  ||||||||||| | ||||||||||||||||||||  || |||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  548881 gtgatttcatcgtcttcgtgcaatgttggtttgttcgtcgtcttcatgtgacgtt-gtttctttttcttgtttctatcaggtatttgatcggttcagatt 548783  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||| ||||||||||||| |||| ||||||||||||| |||||| | |||||||||||||||||| |||||||||||||||||| ||||| |||||||||    
T  548782 gtcatatcagcttcgatctagtgcagatccaatcaattactttggcgtcatccacgctgcagatctggagacatgattattccggagatttaaatatagt 548683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 99 - 323
Target Start/End: Complemental strand, 8633206 - 8632988
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||    ||||||||||| ||||||||| ||||| ||||||||    
T  8633206 gtgatttcgtcgttttcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgtttgttt----ttcttgtttctctcaggtatt-gatcgcttcagatt 8633113  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||  | ||||||||||||| |||||| | ||||||||  |||||||||||| ||||| |||||||| ||||| |||||||||    
T  8633112 gtcagatcagcttcgatccaacgcagatccaatcaattactttggcgtcatccacattgcagatccggaaacatggttattccggagatttaaatatagt 8633013  T
Q  299 catatgtataggcatttgtactttg 323  Q
    ||||||| |||||||||||||||||    
T  8633012 catatgtgtaggcatttgtactttg 8632988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 31748056 - 31748289
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||||||||||| ||||||| || ||||||||||||||||||| ||||||||||||||||||| ||| |||||||||| || ||||||    
T  31748056 gtgatttcgacgtcttcgtgcgacattggtttctttgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcatgtatttgatcagtacagatt 31748154  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||||||||||||||| |||| |||| |||||| ||||||   | |||||| || |||| || |||||| ||| |||||| | ||||| |||||||||    
T  31748155 gtcagatcagcttcgatcaagtgcagattcaatcattgacttcagcgtcatcctcgttgcaaatacggagatatggttattctggagatttaaatatagt 31748254  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||||||||||||||||||||||||||    
T  31748255 catatgtgtaggcatttgtactttgccgttttatg 31748289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 32457745 - 32457973
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||| || |||| |||| ||||||||| ||||||||||||||||||||||||    
T  32457745 gtgatttcgtcgtcttcgtgcgacgttgatttgttcgtcgtctttgtgcgacatt-gtttatttt-cttgtttctctcaggtatttgatcggttcagatt 32457842  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||| || ||||||| ||||| |||||||||| || || ||| | ||||||||| ||||||| |||| |||||||||||| | |||||    ||| ||    
T  32457843 gtcagaccaacttcgattcagtgcagatccaatcgattacgttggcgtcatccacgttgcagattcggatacatgattattctggagatt----tatggt 32457938  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    |||||||  ||||||||||||||||  ||||||||    
T  32457939 catatgtgcaggcatttgtactttgttgttttatg 32457973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 10744682 - 10744914
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| ||||||| ||| |||||||||||||||||||||||| |||||||  ||||||| |||  | ||||||||| ||||||||||||    
T  10744682 gtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcgacg-ttgtttgcctttcttggttcgtttaggtatttgttcggttcagatt 10744780  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||| ||| | ||| ||| ||||||||||   || || ||| |||| ||||||||||| |  ||||||| ||| | |||||||||    
T  10744781 gtcagatcagcttcgatccggtgca-atcaaattaatgactttggagtcgtcaacgttgcaaatccggagacaagggtattccggagacttaaatatagt 10744879  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||| || ||||||||||||||||||    
T  10744880 catatgtgtaggctttagtactttgccgttttatg 10744914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 103 - 333
Target Start/End: Original strand, 34020708 - 34020935
Alignment:
Q  103 tttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtca 202  Q
    ||||| |||||| |||||||| || |||||| ||||||||||| ||||||| ||||||||||| | ||  |  ||||| |||| || | |||||||||||    
T  34020708 tttcgtcgtcttagtgcgacgctgttttgtttgtcgtctttgtacgacgtt-gtttgtttttcctcttgtt--caggtgtttgttcagatcagattgtca 34020804  T
Q  203 gatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcata 302  Q
    ||||||| |||||| ||||||||||||| ||||||||||| | | ||| ||| |||| |||||||| || || |||||||| ||||  ||||||||||||    
T  34020805 gatcagcctcgatctagtgtagatccaaccaatgactttggcgtaatcaacgttgcaaatccggaggcacgactattccgatgattttaatatagtcata 34020904  T
Q  303 tgtataggcatttgtactttgccgttttatg 333  Q
    | | ||||| | ||||||||| |||||||||    
T  34020905 tttgtaggcttatgtactttgtcgttttatg 34020935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 139 - 333
Target Start/End: Original strand, 20496332 - 20496525
Alignment:
Q  139 tctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgac 238  Q
    ||||||| |||| ||||||||| ||| ||||||   ||||||||||| ||||||||||||||||||||||||| ||||||||| | ||||||||||||||    
T  20496332 tctttgtacgac-tttgtttgtcttttttgttttgttcaggtatttgttcggttcagattgtcagatcagcttagatccagtgcaaatccaatcaatgac 20496430  T
Q  239 tttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||||   || || ||| |||| |||  |||| |||  ||||||| ||| |  ||||||||||||||| ||||| |||||||||||||||||||||    
T  20496431 tttggtgtcgtcaacgttgcatatcttgagagatgggtattccggagacttgaatatagtcatatgtgtaggcttttgtactttgccgttttatg 20496525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 32804394 - 32804627
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||  |||||| ||| || |||||||||||| ||||||||||  | |||| |||||| |||||||||||  ||| ||||||| | | ||||||||    
T  32804394 gtgatttcatcgtcttagtgagatgttggtttgttcctcgtctttgtatggcgtt-gtttgtctttcttgtttcgttcatgtatttgtttgattcagatt 32804492  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    || |||||| |||||||| |||| ||||||||||||||||||||   || |||| | || |||| ||||||||||| ||||||  ||| |  ||||||||    
T  32804493 gtgagatcaacttcgatcaagtgcagatccaatcaatgactttggtgtcgtccatgttgtagattcggagacatgaatattccagagacttgaatatagt 32804592  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
     |||||| ||||| |||||||||||  ||||||||    
T  32804593 tatatgtgtaggcttttgtactttgttgttttatg 32804627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 99 - 242
Target Start/End: Complemental strand, 4663835 - 4663693
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| ||||||||||  |||||||||| |||||||||||| ||||||| ||||| |||||||  ||||||||||| | ||||| ||||    
T  4663835 gtgatttcgtcgtcttagtgcgacgttattttgttcgtcatctttgtgcgac-tttgtttttttttattgtttcgttcaggtatttgtttggttctgatt 4663737  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttg 242  Q
    |||| ||||| | |||||||||| | ||| ||||||||||||||    
T  4663736 gtcatatcagttacgatccagtgcatatcaaatcaatgactttg 4663693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 121 - 298
Target Start/End: Original strand, 1944217 - 1944393
Alignment:
Q  121 acgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagt 220  Q
    ||||||||||||  |||||||||||||| |||| |||||| |||||||| ||  ||||||| ||| | |||||| ||||||| ||||||||||||||| |    
T  1944217 acgttggtttgtctgtcgtctttgtgcggcgtt-gtttgtctttcttgtgtcgttcaggtaattgtttggttcaaattgtcatatcagcttcgatccaat 1944315  T
Q  221 gtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |  |||||||||||| | |||| | || |||||| |||| ||||| |||||||| ||||| |||||||  ||||||||    
T  1944316 gcggatccaatcaataattttggcgtcgtccacgttgcatatccgaagacatgaatattctgaagatttgaatatagt 1944393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 333
Target Start/End: Complemental strand, 15128116 - 15127912
Alignment:
Q  127 gtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagat 226  Q
    |||| |||||||||||||||||| ||| |||||| |||||| ||||  ||| ||||||| || |||||||||||||  ||| |||||||||| || ||||    
T  15128116 gtttattcgtcgtctttgtgcgatgtt-gtttgtctttcttctttcattcaagtatttgttctgttcagattgtcaattcaacttcgatccactgcagat 15128018  T
Q  227 ccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccg 326  Q
    | |||||||||||||| | |  |||||| ||||||||||||| | | | ||||| ||||| |  || |||||||||||| ||||| | |||||| ||  |    
T  15128017 caaatcaatgactttggcgttgtccacgttgcagatccggaggc-taaatattctgaagacttgaacatagtcatatgtgtaggcttctgtactctgttg 15127919  T
Q  327 ttttatg 333  Q
    |||||||    
T  15127918 ttttatg 15127912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 116 - 242
Target Start/End: Original strand, 5544823 - 5544948
Alignment:
Q  116 gtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgat 215  Q
    |||||| |||| ||||||||||||||||||| |||| |||||||| |||||| ||||  |||||| |||| | |||||||| ||||| ||||| ||||||    
T  5544823 gtgcgatgttgatttgttcgtcgtctttgtgtgacg-ttgtttgtctttcttatttcgttcaggtgtttgtttggttcagaatgtcatatcagattcgat 5544921  T
Q  216 ccagtgtagatccaatcaatgactttg 242  Q
    || ||| | |||||||||| |||||||    
T  5544922 cctgtgcatatccaatcaacgactttg 5544948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 333
Target Start/End: Complemental strand, 12654207 - 12654092
Alignment:
Q  218 agtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgt 317  Q
    ||||||||||  ||||||||||||| | ||||| ||| ||||||| ||||||||||| ||||||| ||| |  ||||||||||||| | ||||||| |||    
T  12654207 agtgtagatctgatcaatgactttggcgtcatcaacgttgcagattcggagacatgagtattccggagacttgaatatagtcatatttgtaggcatatgt 12654108  T
Q  318 actttgccgttttatg 333  Q
    | |||| |||||||||    
T  12654107 attttgtcgttttatg 12654092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 207 - 333
Target Start/End: Complemental strand, 5417132 - 5417006
Alignment:
Q  207 agcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgta 306  Q
    ||||||||| ||||| |||||||||||| |||||||   || |||||| ||||||||| || |||||  |||| || ||| |  |||||||||||||||     
T  5417132 agcttcgatgcagtgcagatccaatcaaagactttggtgtcgtccacgttgcagatccagatacatgggtatttcggagacttgaatatagtcatatgtg 5417033  T
Q  307 taggcatttgtactttgccgttttatg 333  Q
    || || |||||||||||||||||||||    
T  5417032 tatgcttttgtactttgccgttttatg 5417006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 132 - 242
Target Start/End: Original strand, 31804352 - 31804461
Alignment:
Q  132 ttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaat 231  Q
    ||||||||||| ||||||| || |||||| |||||||||||  ||| ||||||| ||  |||||||||||||||||| ||||||| |||| ||||| |||    
T  31804352 ttcgtcgtcttagtgcgacatt-gtttgtctttcttgtttcgctcaagtatttgctcaattcagattgtcagatcagattcgatctagtgcagatcaaat 31804450  T
Q  232 caatgactttg 242  Q
     ||||||||||    
T  31804451 gaatgactttg 31804461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 5417213 - 5417141
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttc 172  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||| || |||||| | |||||||||||    
T  5417213 gtgatttcgtcgtctttgtgcgacgttggtttgttcgtcgtctttgtgcggcg-ttgtttctctttcttgtttc 5417141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 8644375 - 8644486
Alignment:
Q  130 tgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatcca 229  Q
    |||| |||||||||||||| |||| | |||| ||||||||||   ||||||||||| | ||||||||||||| ||||| ||| |||||| || |||| ||    
T  8644375 tgttggtcgtctttgtgcggcgtt-gcttgtctttcttgttttgttcaggtatttgtttggttcagattgtctgatcaacttagatccattgcagattca 8644473  T
Q  230 atcaatgactttg 242  Q
    |||||||||||||    
T  8644474 atcaatgactttg 8644486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 154
Target Start/End: Complemental strand, 15128168 - 15128113
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttt 154  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||    
T  15128168 gtgatttcgtcgtcttagtgcgacgttggtttgttcgtcgtctttgtgcggcgttt 15128113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 329
Target Start/End: Complemental strand, 33541544 - 33541317
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgttttt---cttgtttctatcaggtatttgatcggttcag 195  Q
    ||||||| | |||||| ||| |||| || |||||| ||||||||||||||| ||| |||||| |||   ||||||     ||||| |||| | | |||||    
T  33541544 gtgattttgtcgtcttagtgtgacgctgttttgtttgtcgtctttgtgcgatgtt-gtttgtcttttcccttgtt-----caggtgtttgttagattcag 33541451  T
Q  196 attgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatat 295  Q
    ||||| |||||||||||| ||||||| |||||||| |||||||||||   ||||| ||| | |||||  |||  |||| || |||||||||||  |||||    
T  33541450 attgttagatcagcttcgttccagtgcagatccaaccaatgactttggtgtcatcaacgtttcagatttggatgcatggttgttccgaagattttaatat 33541351  T
Q  296 agtcatatgtataggcatttgtactttgccgttt 329  Q
    |||||| | | ||||| | ||||||||| |||||    
T  33541350 agtcatgtttgtaggcttatgtactttgtcgttt 33541317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 305
Target Start/End: Original strand, 892482 - 892588
Alignment:
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||||| ||||||| |||||| |||||||||||||||||||| | |  |||||| |||| || ||||||||||| ||| ||| ||| |  ||||||||    
T  892482 gtcagatctgcttcgacccagtgcagatccaatcaatgactttggcgttgtccacgttgcaaattcggagacatgagtatcccggagacttgaatatagt 892581  T
Q  299 catatgt 305  Q
    |||||||    
T  892582 catatgt 892588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 232
Target Start/End: Original strand, 904386 - 904499
Alignment:
Q  118 gcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatcc 217  Q
    ||||| || ||||||||| |||||||||| |||||| |||||| ||||||||||   |||  ||| || |||||||||| ||||||||||||||||||||    
T  904386 gcgacattagtttgttcgccgtctttgtgtgacgtt-gtttgtctttcttgttttgttcaactatatgttcggttcagactgtcagatcagcttcgatcc 904484  T
Q  218 agtgtagatccaatc 232  Q
    | || | ||||||||    
T  904485 aatgcatatccaatc 904499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 242
Target Start/End: Original strand, 22530379 - 22530520
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| ||| ||||||  ||||||| || ||||||||||| ||| |||||| |||||| ||| | | || |||||| ||| ||  |||     
T  22530379 gtgatttcgacgtcttagtgagacgttattttgttcatcatctttgtgcgatgtt-gtttgtctttcttttttgtttaag-tatttgttcgattttgatg 22530476  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttg 242  Q
    ||||||||| ||||||||||||| ||||||||| ||| ||||||    
T  22530477 gtcagatcaacttcgatccagtgcagatccaatgaatcactttg 22530520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 208
Target Start/End: Original strand, 33194704 - 33194812
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||| || ||| || |||||||||||||||||  ||| |||  ||| |||||| |||||| ||||  || |||||||| ||||||||||||    
T  33194704 gtgatttcgtcgtgttagtgtgatgttggtttgttcgtcgtacttgagcgttgtt-gtttgtctttcttatttccttcgggtatttgttcggttcagatt 33194802  T
Q  199 gtcagatcag 208  Q
    ||||||||||    
T  33194803 gtcagatcag 33194812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 233 - 333
Target Start/End: Complemental strand, 12481253 - 12481153
Alignment:
Q  233 aatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttat 332  Q
    |||||||||| | || || ||| |||||||||||||||||||  |||||| ||| |  ||||||||||||| | |||||||  |||| ||||||||||||    
T  12481253 aatgactttggcgtcgtcaacgttgcagatccggagacatgaggattccggagacttgaatatagtcatatttgtaggcataggtaccttgccgttttat 12481154  T
Q  333 g 333  Q
    |    
T  12481153 g 12481153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 189 - 272
Target Start/End: Complemental strand, 17874613 - 17874530
Alignment:
Q  189 ggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacat 272  Q
    |||| ||||||| ||||||| || ||||||||||| || ||| | ||||||||||||||||| ||| || | ||| ||||||||    
T  17874613 ggtttagattgttagatcagttttgatccagtgtaaattcaaccgatgactttgacatcatcaacgttgtaaatctggagacat 17874530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 303
Target Start/End: Complemental strand, 23638004 - 23637933
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatat 303  Q
    ||||||||||||| || || | | ||||||||||||||||||| ||||||| ||| |  |||||||||||||    
T  23638004 caatgactttgacgtcgtcaatgttgcagatccggagacatgagtattccggagacttgaatatagtcatat 23637933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 333
Target Start/End: Original strand, 8644518 - 8644560
Alignment:
Q  291 aatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||    
T  8644518 aatatagtcatatgtgtaggcttttgtactttgtcgttttatg 8644560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 333
Target Start/End: Complemental strand, 12652188 - 12651983
Alignment:
Q  123 gttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgt 222  Q
    |||| |||||||||||| ||| ||||| ||| |||| | |||||||||||  ||| ||||||| ||||||  ||||||||||||| ||| |||  ||||     
T  12652188 gttgttttgttcgtcgtatttctgcgatgtt-gtttttctttcttgtttcgttcatgtatttgttcggttaggattgtcagatcaacttagatttagtgc 12652090  T
Q  223 agatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtacttt 322  Q
    ||    ||| |||||||||| | || || ||| ||||||||||  ||| |   ||||||| ||| |  ||||||||||||||| ||||  |||||| |||    
T  12652089 ag----aataaatgactttggcgtcgtcaacgttgcagatccgacgacttaggtattccggagacttgaatatagtcatatgtgtaggtttttgtaattt 12651994  T
Q  323 gccgttttatg 333  Q
    | | |||||||    
T  12651993 gtcattttatg 12651983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 303
Target Start/End: Complemental strand, 13871512 - 13871439
Alignment:
Q  230 atcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatat 303  Q
    ||||||||||||| | || || ||| ||||||||||||||||||| ||||||| |||    |||||||||||||    
T  13871512 atcaatgactttggcgtcgtcaacgttgcagatccggagacatgagtattccggagacatgaatatagtcatat 13871439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 19759789 - 19759826
Alignment:
Q  1 agggtcaatttttggcacaaaatcacccctctaactcg 38  Q
    |||||||||||||| | |||||||||||||||||||||    
T  19759789 agggtcaatttttgacccaaaatcacccctctaactcg 19759826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 164
Target Start/End: Original strand, 32574536 - 32574599
Alignment:
Q  100 tgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgttttt 164  Q
    |||||||| ||||||  ||||| |||||||||||| |||| |||||||| ||||| |||||||||    
T  32574536 tgatttcgtcgtcttaatgcgatgttggtttgttcatcgtatttgtgcggcgttt-tttgttttt 32574599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 163; Significance: 5e-87; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 29310369 - 29310136
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||| |||    
T  29310369 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgatcagttcaaatt 29310271  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
     |||||||||||||||||||||| |||||||||||||||||||| | ||||||||| |||||||||||| ||||| |||||||| ||||| |||||||||    
T  29310270 atcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggatacatggttattccggagatttaaatatagt 29310171  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||||| || |||||||||||||||||    
T  29310170 catatgtgtaggcaattctactttgccgttttatg 29310136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 6887193 - 6886960
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||| |||||||||    
T  6887193 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgtttttcttgcttctctcaggtatttgatcagttcagatt 6887095  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    || |||| ||||||||||||||| |||||||||||||||||||| | ||||||||| |||||||||||| ||||| | |||||| ||||| |||||||||    
T  6887094 gttagattagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggatacatggtaattccggagatttaaatatagt 6886995  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||||| ||||||||||||||||||||    
T  6886994 catatgtgtaggcaattgtactttgccgttttatg 6886960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 31645928 - 31646161
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||| |||||||||    
T  31645928 gtgatttcttcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-gtttgttttccttgtttctctcaggtatttgatcagttcagatt 31646026  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||   ||||||||| |||||||||||| ||||| |||||||| ||||| |||||||||    
T  31646027 gtcagatcaacttcgatccagtgcagatccaatcaatgactttggtgtcatccacgttgcagatccggatacatggttattccggagatttaaatatagt 31646126  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||||| ||||||||||||||||||||    
T  31646127 catatgtgtaggcaattgtactttgccgttttatg 31646161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 4070651 - 4070882
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||    
T  4070651 gtgatttcgtcgtattcgtgcgacgttggtt-gttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgatcgtttcagatt 4070748  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||||||||||||||| |||| |||||||||||||||||||| | ||||||||| |||||||||||| ||||| |||||||| ||||| |||||||||    
T  4070749 gtcagatcagcttcgatctagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagt 4070848  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||| |||||||||||| |||||||||    
T  4070849 catatgtgtaggtatttgtactttg-cgttttatg 4070882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 28618702 - 28618934
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||  |||||||||||||||||| ||||||||||||||| || |||||    
T  28618702 gtgatttcgtcgtcttcgtgcgacgttggtt-gttcatcgtctttgtgcgacgtta-tttgtttttcttgtttctctcaggtatttgatcgctttagatt 28618799  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| |||||||||||||||||||| | ||||||||| |||||||||||| ||||| ||||| || | ||| |||||||||    
T  28618800 gtcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggaaacatggttatttcggaaatttaaatatagt 28618899  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||||||||||||||| |||||||||    
T  28618900 catatgtgtaggcatttgtactttgtcgttttatg 28618934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 99 - 305
Target Start/End: Complemental strand, 4726943 - 4726738
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||    
T  4726943 gtgatttcgtcgtcttcgtgcgatgttggttagttcgtcgtctttgtgcgacgtt-gtttgtctttcttgtttctctcaggtatttgatcggttcagatt 4726845  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||||||||||| |||||||| ||||||||||||||||||||   ||||| ||| ||||||||||||||||||| ||||||| ||||| |||||||||    
T  4726844 gtcagatcagcttcaatccagtgcagatccaatcaatgactttggtgtcatctacgttgcagatccggagacatgactattccggagatttaaatatagt 4726745  T
Q  299 catatgt 305  Q
    |||||||    
T  4726744 catatgt 4726738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 10924148 - 10923916
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| |||| ||||||||||||||| |||    
T  10924148 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttg--ttgtttttcttgtttctctcagatatttgatcggttcaaatt 10924051  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||| ||||| |||| || ||||| |||||||||||| ||||||| | | ||||||| ||||||||||||   ||| |||||| | ||||| |||||||||    
T  10924050 gtcggatcaacttcaatgcagtgcagatccaatcaacgactttggcgttatccacgttgcagatccggatgaatggttattcaggagatttaaatatagt 10923951  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||||||||||||||||||||| |||||||||    
T  10923950 catatgtataggcatttgtactttgtcgttttatg 10923916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 41554586 - 41554819
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| ||||||| ||| ||| ||||||||| |||||||||||| |||||| |||||||||||  ||||||||||| ||||||||||||    
T  41554586 gtgatttcgtcgtcttagtgcgaccttgttttattcgtcgtccttgtgcgacgtt-gtttgtctttcttgtttcgctcaggtatttgttcggttcagatt 41554684  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||  ||| || ||| ||||||||||||||||||  ||||||| ||| | |||||||||    
T  41554685 gtcagatcagcttcgatccagtgcagatcaaatcaatgactttggaatcgtcaacgttgcagatccggagacatgggtattccggagacttaaatatagt 41554784  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||| || ||||||||||||||||||    
T  41554785 catatgtgtaggctttagtactttgccgttttatg 41554819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 2415499 - 2415734
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | ||||||| |||||||||||||||||||| ||||||||||||| || |||||| ||| ||||| || ||||||||||| ||||||||||||    
T  2415499 gtgattttgtcgtcttcatgcgacgttggtttgttcgttgtctttgtgcgacatt-gtttgtcttttttgttactttcaggtatttgttcggttcagatt 2415597  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| |||| ||||||| |||||| || ||||||||| |||||||||| ||||||||||||||||||||   |||||||||    
T  2415598 gtcagatcagcttcgatccagtgcagattcaatcaacgactttaacttcatccacgttgcagatccgaagacatgattattccgaagacataaatatagt 2415697  T
Q  299 c--atatgtataggcatttgtactttgccgttttatg 333  Q
    |  |||||| ||||||||| ||||||| |||||||||    
T  2415698 catatatgtgtaggcatttatactttgtcgttttatg 2415734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 99 - 318
Target Start/End: Complemental strand, 41063411 - 41063193
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||||||  |||||||||||||| |||| ||||| |||||||| ||||||||||||| ||||| || | |||||||||||||||||||    
T  41063411 gtgatttcgtcgtcttcgtatgacgttggtttgtttgtcggctttgagcgacgtt-gtttgtttttcttatttctctcggctatttgatcggttcagatt 41063313  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
     | | |||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||| ||||||| |||||||| ||||| ||||||| |    
T  41063312 cttatatcagcttcgatccagtgcagatccaattaatgactttgacatcatccacgttgcagatccgcagacatggttattccggagatttaaatataat 41063213  T
Q  299 catatgtataggcatttgta 318  Q
    ||||||||||| ||||||||    
T  41063212 catatgtatagacatttgta 41063193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 5378401 - 5378634
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||||||||||  ||||||||||||||||||||||||||| || | |||| |||||||||||| |||| | |||||||||||||||||    
T  5378401 gtgatttcgtcgtcttcgtgcgaaattggtttgttcgtcgtctttgtgcgacatt-gcttgtctttcttgtttctctcagatgtttgatcggttcagatt 5378499  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||| |||||| ||||||||| || ||||| |||||||||||||| | ||||||||| ||||||||||||||||||| ||||||| ||||| |||| ||||    
T  5378500 gtcggatcagtttcgatccaatgcagatcaaatcaatgactttggcgtcatccacgttgcagatccggagacatgactattccggagatttaaatgtagt 5378599  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||| |||||||| |||  ||||||||    
T  5378600 catatgtgtaggaatttgtaccttgttgttttatg 5378634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 9034957 - 9034724
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||  |||||||||||||||||||||||||| ||||||||||||||| || || ||| |||||||||||| ||||||||||||||||||||||||    
T  9034957 gtgatttcatcgtcttcgtgcgacgttggtttgttcctcgtctttgtgcgacatt-gtctgtctttcttgtttctctcaggtatttgatcggttcagatt 9034859  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||||||| ||||||| |||| ||||||||||||||||||||   |||| || | |||||||||  ||||||| ||||| || ||||| |||||||||    
T  9034858 gtcagatcagtttcgatctagtgcagatccaatcaatgactttggggtcattcatgttgcagatccaaagacatggttatttcggagatttaaatatagt 9034759  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
     |||||| ||| ||||||||||||| |||||||||    
T  9034758 tatatgtgtagacatttgtactttgtcgttttatg 9034724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 132 - 333
Target Start/End: Original strand, 35906401 - 35906601
Alignment:
Q  132 ttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaat 231  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||| || ||||||||||||||||||| |||||||||    
T  35906401 ttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgatcagttcagattatcggatcagcttcgatccagtgcagatccaat 35906499  T
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    ||||||||||| | ||||||||  |||||||||||| ||||| ||||| || ||||| |||||||||||||||| |||||| ||||| |||| |||||||    
T  35906500 caatgactttggcgtcatccacattgcagatccggatacatggttatttcggagatttaaatatagtcatatgtgtaggcaattgtattttgtcgtttta 35906599  T
Q  332 tg 333  Q
    ||    
T  35906600 tg 35906601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 20270813 - 20271046
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| ||||||||||| |||||||||||||||||||||||||| |||||  |||||||||||  ||||||||||| ||||||||||||    
T  20270813 gtgatttcgtcgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgtt-gtttgcctttcttgtttcgttcaggtatttgttcggttcagatt 20270911  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||||||||||||| |||||||| ||||| ||||||||||||||   || || ||| ||||||||||||||||||  |||| || ||| | |||||||||    
T  20270912 gtcagatcagcttcaatccagtgcagatcaaatcaatgactttggagtcttcaacgttgcagatccggagacatggatatttcggagacttaaatatagt 20271011  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||| | || |||||||| |||||||||    
T  20271012 catatgtgtagactttagtactttgtcgttttatg 20271046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 40774859 - 40775093
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | |||||| ||||||||||| ||||| |||||||||||||| || ||   |||| |||||||||||  ||||||||||| ||||||||||||    
T  40774859 gtgattttgtcgtcttagtgcgacgttgttttgtccgtcgtctttgtgcaaccttgtattgtctttcttgtttcgttcaggtatttgttcggttcagatt 40774958  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||||||||| ||||||||||||||   || || ||| ||||||||||||||||||  ||||||| | | | |||||||||    
T  40774959 gtcagatcagcttcgatccagtgtagatcaaatcaatgactttggagtcttcaacgttgcagatccggagacatgggtattccggaaacttaaatatagt 40775058  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||| || |||||||| |||||||||    
T  40775059 catatgtgtaggctttagtactttgtcgttttatg 40775093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 33486584 - 33486351
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| ||||||| ||| |||||||||||||||||||||||||| |||||| |||||||||||  ||| ||||||| ||||||||||||    
T  33486584 gtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgtt-gtttgtctttcttgtttcgttcaagtatttgttcggttcagatt 33486486  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    |||| |||||||||||||||||| ||||| || |||||||||||   || || ||| ||||||||||||| ||||  ||||| | ||| | |||||| ||    
T  33486485 gtcaaatcagcttcgatccagtgcagatcaaaccaatgactttggagtcgtcaacgttgcagatccggaggcatgggtattctggagacttaaatatggt 33486386  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||| || ||||||||||||||||||    
T  33486385 catatgtgtaggctttagtactttgccgttttatg 33486351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 8812166 - 8811934
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||| ||   |||||||| ||||||||||   || |||||||| ||||||||||||    
T  8812166 gtgatttcgccgtcttagtgcgacgttgttttgttcgtcgtctttgtgggag--ttgtttgtctttcttgttttgttcgggtatttgttcggttcagatt 8812069  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||    ||||| ||| |||||||| |||||||    ||||||| ||| | |||||||||    
T  8812068 gtcagatcagcttcggtccagtgcagatcaaatcaatgactttagagtcatcaacgttgcagatctggagacaatggtattccggagacttaaatatagt 8811969  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||| || ||||||||||||||||||    
T  8811968 catatgtgtaggctttagtactttgccgttttatg 8811934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 99 - 331
Target Start/End: Complemental strand, 6647928 - 6647697
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| |||||||| ||   | ||||||||||||||||| |||| |||||| ||||||||||   |||| |||||| ||||||||||||    
T  6647928 gtgatttcgtcgtcttagtgcgacgatgtgctattcgtcgtctttgtgcggcgtt-gtttgtctttcttgttttattcagctatttgttcggttcagatt 6647830  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||| ||||||| |||| |||| |||||||||||||||||| | | ||||| ||| ||||||||||||||||||  ||||||| ||| |  ||||||||    
T  6647829 gtcaggtcagcttagatcaagtgcagatccaatcaatgacttcggcgtcatcaacgttgcagatccggagacatggatattccggagactttaatatagt 6647730  T
Q  299 catatgtataggcatttgtactttgccgtttta 331  Q
    ||||||| ||||| |||||||||| ||||||||    
T  6647729 catatgtgtaggcttttgtacttttccgtttta 6647697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 18472740 - 18472508
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| ||| ||| ||| ||||||| |||||||||||||||||| |||||| |||||||||||  ||||||||||| ||| ||||||||    
T  18472740 gtgatttcgtcgtcttagtgtgactttg-tttgttcctcgtctttgtgcgacgtt-gtttgtctttcttgtttcattcaggtatttgttcgattcagatt 18472643  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||||   || || ||| || ||||| |||||||||| ||||||| ||| | | |||||||    
T  18472642 gtcagatcaacttcgatccagtgcagatcaaatcaatgactttgtagtcgtcaacgttgtagatctggagacatgagtattccggagacttacatatagt 18472543  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| ||||| || ||||||||  ||||||||    
T  18472542 catatgtgtaggctttagtactttgttgttttatg 18472508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 109 - 308
Target Start/End: Complemental strand, 19646046 - 19645849
Alignment:
Q  109 cgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcag 208  Q
    |||||| ||||| |||  ||||||| |||||||||||| |||||| |||||| |||||||||||| | | ||||||| | | ||||||||||||||||||    
T  19646046 cgtctttgtgcggcgtcagtttgtttgtcgtctttgtgtgacgtt-gtttgtctttcttgtttctttgaagtatttgttagattcagattgtcagatcag 19645948  T
Q  209 cttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtata 308  Q
     ||||||| |||| ||||||||||||||||||||   ||||||||| |||| ||||| ||||||| |||||||| |||||  ||||||||||||||||||    
T  19645947 attcgatcaagtgcagatccaatcaatgactttggtgtcatccacgttgca-atccgaagacatggttattccggagatttgaatatagtcatatgtata 19645849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 99 - 242
Target Start/End: Complemental strand, 22397563 - 22397421
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||||||||| || |||||| |||||| ||||  ||||||||||| ||| ||||||||    
T  22397563 gtgatttcgtcgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacatt-gtttgtctttcttatttcgttcaggtatttgttcgattcagatt 22397465  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttg 242  Q
    |||||||||||||||||| |||| ||||| ||||||||||||||    
T  22397464 gtcagatcagcttcgatctagtgcagatcaaatcaatgactttg 22397421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 99 - 332
Target Start/End: Original strand, 34844015 - 34844247
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | |||| | ||||||| ||| | |||| ||| ||||| | ||||||| |||||| ||| |||||||  ||||||||||| ||| ||||||||    
T  34844015 gtgattttgtcgtcctagtgcgactttgttatgtttgtcatctttatacgacgtt-gtttgtcttttttgtttcgttcaggtatttgctcgattcagatt 34844113  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||   || || | | |||||| ||||||| |||  ||||| |  || | |||||||||    
T  34844114 gtcagatcagcttcgatccagtgcagatcaaatcaatgactttggagtcgtcaatgttgcagacccggagatatgggtattctggcgacttaaatatagt 34844213  T
Q  299 catatgtataggcatttgtactttgccgttttat 332  Q
    ||||||| ||||| || |||||||||||||||||    
T  34844214 catatgtgtaggctttagtactttgccgttttat 34844247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 40565170 - 40564939
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttcta--tcaggtatttgatcggttcaga 196  Q
    ||||||||| |||||| |||||||  || |||||| |||||||||||||||||||     |||| |||| |  |||  |||||| |||| | | |||| |    
T  40565170 gtgatttcgtcgtcttagtgcgaccatgttttgtttgtcgtctttgtgcgacgtt-----gtttgtcttttccctagttcaggtgtttgtttgattcata 40565076  T
Q  197 ttgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatata 296  Q
    |||||||||||| |||||||||||| | |||||| ||||||||||| | ||||| ||| ||||||||||||||||||  ||||||| |||||  ||||||    
T  40565075 ttgtcagatcagtttcgatccagtgcaaatccaaccaatgactttggcgtcatcaacgttgcagatccggagacatggctattccggagattttaatata 40564976  T
Q  297 gtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| | ||||| | ||||||||| |||||||||    
T  40564975 gtcatatttgtaggcttatgtactttgtcgttttatg 40564939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 6074669 - 6074550
Alignment:
Q  182 tttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattcc 281  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||| ||| ||||||||||||| |||| |||||||    
T  6074669 tttgttcggttcagattgtcagatcaacttcgatccagtgtagatccaatcaatgactttggcgtcatcaacgttgcagatccggaggcatggttattcc 6074570  T
Q  282 gaagattgaaatatagtcat 301  Q
      | |||  |||||||||||    
T  6074569 agatattttaatatagtcat 6074550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 14910691 - 14910458
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||  |||||| || |||| ||| |||||||| ||| ||||||  || || |||||| |||||||||||  ||| ||||||| ||| || |||||    
T  14910691 gtgatttcatcgtcttagtacgacattgttttgttcgccgtatttgtgtaacatt-gtttgtctttcttgtttcgttcatgtatttgttcgttttagatt 14910593  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||| ||||||||||  | | ||| |||||||||||||||  |  || ||| ||||||||||||||||||| ||||||| ||| | |||||||||    
T  14910592 gtcagatcaacttcgatccatcgcatatcaaatcaatgactttgaagttgtcaacgatgcagatccggagacatgagtattccggagacttaaatatagt 14910493  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
     |||||| ||||  || ||| ||||||||||||||    
T  14910492 tatatgtgtaggttttagtattttgccgttttatg 14910458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 123 - 333
Target Start/End: Original strand, 32387588 - 32387796
Alignment:
Q  123 gttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgt 222  Q
    |||| ||||||  ||||||||||||| |||| |||||  ||||||||||   ||||||||||| ||| |||| ||||||||| ||||||||||| ||||     
T  32387588 gttgatttgtttatcgtctttgtgcggcgtt-gtttgcctttcttgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgc 32387685  T
Q  223 agatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtacttt 322  Q
    ||||||||||||||| ||||||||| | |||| |||||||||||||||||   | ||||  | | |  ||||||||||||||| ||||| ||||||| ||    
T  32387686 agatccaatcaatgattttgacatcgttcacgttgcagatccggagacataggtgttccagatacttgaatatagtcatatgtgtaggcttttgtacctt 32387785  T
Q  323 gccgttttatg 333  Q
    | |||||||||    
T  32387786 gtcgttttatg 32387796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 153 - 330
Target Start/End: Original strand, 28500841 - 28501018
Alignment:
Q  153 ttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatcca 252  Q
    |||||||| |||||| ||||  || |||||||| |||||||||||||||| |||| ||||||||||||   ||||||||||||||||||| | || ||||    
T  28500841 ttgtttgtctttcttatttcgttcgggtatttgttcggttcagattgtcatatcaacttcgatccagtacggatccaatcaatgactttgtcgtcctcca 28500940  T
Q  253 cgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttt 330  Q
    || ||||||||||||||||||  ||||| | |||    ||||||||||||| | ||||  ||||||||||| ||||||    
T  28500941 cgttgcagatccggagacatgggtattctggagacatgaatatagtcatatctgtaggtgtttgtactttgtcgtttt 28501018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 121 - 333
Target Start/End: Original strand, 8957327 - 8957538
Alignment:
Q  121 acgttggtttgttcgtcgtctttgtgcgacgtttgtttgt-ttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccag 219  Q
    |||||| |||||| || |||||||||||||||| |||||| ||||||   || | |||||| |||| || |||||||||||||||||||||||||||||     
T  8957327 acgttgttttgtttgttgtctttgtgcgacgtt-gtttgtcttttctctcttgt-tcaggtgtttgttcagttcagattgtcagatcagcttcgatccaa 8957424  T
Q  220 tgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtac 319  Q
    || |||| ||| ||||||||||  | ||||| ||| |||||||||||||| |||  |||| || |||||  ||||||||||||| | | ||| | |||||    
T  8957425 tgcagattcaaccaatgacttttgcgtcatcaacgttgcagatccggagatatggctatttcggagattttaatatagtcatatttgttggcttgtgtac 8957524  T
Q  320 tttgccgttttatg 333  Q
    |||| |||||||||    
T  8957525 tttgtcgttttatg 8957538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 136 - 333
Target Start/End: Original strand, 29154356 - 29154552
Alignment:
Q  136 tcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaat 235  Q
    |||||||||||||| ||| ||| || |||||| ||||  | ||| ||||| |||||| ||||||||| ||  |||||||| ||||| ||||||||| |||    
T  29154356 tcgtctttgtgcgatgttggtt-gtctttcttttttcgtttaggcatttgttcggtttagattgtcaaataggcttcgattcagtgcagatccaattaat 29154454  T
Q  236 gactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    || ||||   ||||||| | ||||||||||||||||||| ||||||| ||| | ||||||| || ||||| ||||  ||||||||||| |||||||||    
T  29154455 gattttggtgtcatccatgttgcagatccggagacatgagtattccggagagttaaatataatcgtatgtgtaggtttttgtactttgtcgttttatg 29154552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 109 - 306
Target Start/End: Original strand, 37425133 - 37425324
Alignment:
Q  109 cgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcag 208  Q
    |||||| ||||||||||| |||||| ||||||||||||||||||| ||||||  ||||||||||   |||||||||| || ||| ||||||||||         
T  37425133 cgtctttgtgcgacgttgttttgtttgtcgtctttgtgcgacgtt-gtttgtcattcttgtttcgtacaggtatttgttcagtttagattgtcag----- 37425226  T
Q  209 cttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgta 306  Q
    ||| ||||||||||||||| ||||||||||||||   || || ||| ||||||| ||||  |||| |||||||| ||| | |||||||||||| ||||    
T  37425227 ctttgatccagtgtagatcaaatcaatgactttggagtcctcaacgttgcagattcggatgcatggttattccggagacttaaatatagtcatgtgta 37425324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 20146231 - 20146001
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | |||||| ||||||||||| |||||| ||||||||||| || |||| |||||| ||||   | |   |||||| |||| ||||||   |||    
T  20146231 gtgattttgtcgtcttagtgcgacgttgttttgtttgtcgtctttgtacggcgtt-gtttgtctttcccctcttgttcaggtgtttgttcggtt---att 20146136  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    || ||||||||||||||| |||| |||||||||||||||||||| | ||||  ||| ||||||||| ||  ||||  |||||||||||||  ||||||||    
T  20146135 gttagatcagcttcgatctagtgcagatccaatcaatgactttggcgtcatgaacgttgcagatccagatgcatgtctattccgaagattttaatatagt 20146036  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||| | ||||| | ||||||||| | |||||||    
T  20146035 catatttgtaggcttatgtactttgtcattttatg 20146001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 111 - 333
Target Start/End: Original strand, 15710653 - 15710876
Alignment:
Q  111 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagct 210  Q
    |||| ||||||||||| || |||||| ||||||||| | |||| |||||| |||||||||||  ||||||||||| |||||||  |||||||||||||||    
T  15710653 tcttagtgcgacgttgtttcgttcgttgtctttgtgtggcgtt-gtttgtctttcttgtttcgttcaggtatttgttcggttcgaattgtcagatcagct 15710751  T
Q  211 tcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaat---atagtcatatgtat 307  Q
    | |||| |||| |||||||||||||| | ||| | ||||| ||| ||||||||  |||||||   ||||||| | ||| ||||   |||||||||||  |    
T  15710752 tagatctagtgcagatccaatcaatggc-ttggcgtcatcaacgttgcagatctagagacatatgtattccggatatttaaatataatagtcatatgcgt 15710850  T
Q  308 aggcatttgtactttgccgttttatg 333  Q
    || | |||||||||||  ||||||||    
T  15710851 agtcttttgtactttgttgttttatg 15710876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 99 - 323
Target Start/End: Original strand, 13007791 - 13008013
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| |||| |||||| ||| |||||||||||||||||||||| |||||| ||||||||| |  ||||||||||| |||| ||| |||    
T  13007791 gtgatttcgtcgtcttagtgcaacgttgttttattcgtcgtctttgtgcgacgtt-gtttgtctttcttgtt-cgctcaggtatttgttcggatcaaatt 13007888  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
     ||| ||||||||  |||||| | | ||||||||| |||||||  | ||||| ||| || |||||||||| ||||  ||||||| ||| |  ||||| ||    
T  13007889 atcatatcagcttaaatccagggcatatccaatcattgacttttgcgtcatcaacgttgtagatccggagtcatgggtattccggagacttgaatattgt 13007988  T
Q  299 catatgtataggcatttgtactttg 323  Q
    ||||| | || |  |||||||||||    
T  13007989 catatatgtatgtttttgtactttg 13008013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 274
Target Start/End: Original strand, 34873960 - 34874134
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||  ||||| |||| ||| |||||| |||||||| | |||| |||||| |||||||||||| |||| |||||   || |||| |||    
T  34873960 gtgatttcgtcgtcttaatgcgatgttgttttattcgtcatctttgtgtggcgtt-gtttgtctttcttgtttctttcagatatttatccgattcaaatt 34874058  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatga 274  Q
    |||| |||| |||||||| |||| ||||||||| |||||||||| | || || ||| |||| ||||||||||||||    
T  34874059 gtcatatcaacttcgatctagtgcagatccaatgaatgactttggcgtcgtcaacgttgcatatccggagacatga 34874134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 329
Target Start/End: Original strand, 41358138 - 41358357
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | |||||| ||||||| ||| |||||||||||| |||||||| |||| |||||| ||||||||||  || ||||||||| ||||||||||||    
T  41358138 gtgattttgtcgtcttagtgcgacattgttttgttcgtcgtgtttgtgcggcgtt-gtttgtctttcttgttttaattaggtatttgttcggttcagatt 41358236  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||          |||||| || |||| ||||||||||||||||| || || ||| | |||||||| ||||||  |||||||  | | |  ||||||||    
T  41358237 gtca----------gatccaatgcagattcaatcaatgactttgacgtcgtcaacgttacagatccgaagacatagttattccagatactttaatatagt 41358326  T
Q  299 catatgtataggcatttgtactttgccgttt 329  Q
    ||||||| ||| | |||||||||||| ||||    
T  41358327 catatgtttagacttttgtactttgcggttt 41358357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 330
Target Start/End: Original strand, 34866526 - 34866760
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| ||||||||||  |||||||||||||||||| || || | |||| | |||||| ||||  |||| |||||| ||| |||| |||    
T  34866526 gtgatttcgtcgtcttagtgcgacgttattttgttcgtcgtctttgtacggcg-tagtttatctttcttttttcattcagatatttgttcgattcaaatt 34866624  T
Q  199 gtcagatcagcttcgatccagtgtag----atccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaata 294  Q
    |||| || |||||||||| |||| ||    ||||||||||| | |||||| || || | | ||||||||||||||||||| |||| || ||| |  ||||    
T  34866625 gtcatataagcttcgatctagtgcagatccatccaatcaataattttgacgtcgtcaatgttgcagatccggagacatgaatatttcggagacttgaata 34866724  T
Q  295 tagtcatatgtataggcatttgtactttgccgtttt 330  Q
    | | ||||||| ||| | ||||||||||| ||||||    
T  34866725 tggccatatgtgtagccttttgtactttgacgtttt 34866760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 237
Target Start/End: Complemental strand, 34893923 - 34893822
Alignment:
Q  135 gtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaa 234  Q
    ||||||||||||||||||| ||||||||||||||||||  |||| ||||||||||||||| |||||||||| | ||||| ||||||| | || |||||||    
T  34893923 gtcgtctttgtgcgacgtt-gtttgtttttcttgtttccctcagctatttgatcggttcatattgtcagattaacttcgttccagtgcaaattcaatcaa 34893825  T
Q  235 tga 237  Q
    |||    
T  34893824 tga 34893822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 99 - 270
Target Start/End: Original strand, 13079244 - 13079413
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| |||| |||||| ||| |||||||||||||||||||  |||||||| ||||||| |||  ||||||||||| |||| ||| |||    
T  13079244 gtgatttcgtcgtcttagtgcaacgttgttttattcgtcgtctttgtgcgac-attgtttgtctttcttg-ttcgttcaggtatttgttcggatcaaatt 13079341  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagac 270  Q
     ||| ||||||||  |||||| | | ||||||||| |||||||  | ||||| ||| || ||||||||||||    
T  13079342 atcatatcagcttaaatccagggcatatccaatcattgacttttgcgtcatcaacgttgtagatccggagac 13079413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 99 - 242
Target Start/End: Complemental strand, 32390662 - 32390520
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| | | || |||||||||||||| ||| || ||||||||||| |||| |||||| |||||||||||  || |||||||| |||||||| |||    
T  32390662 gtgatttcgtcatattagtgcgacgttggttcgtttgttgtctttgtgcggcgtt-gtttgtctttcttgtttcattcgggtatttgttcggttcaaatt 32390564  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttg 242  Q
     |||||| |||||| ||| |||||||||| ||| ||||| ||||    
T  32390563 atcagattagcttcaatctagtgtagatctaattaatgattttg 32390520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 175 - 333
Target Start/End: Complemental strand, 17325602 - 17325444
Alignment:
Q  175 tcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatga 274  Q
    |||||| |||| ||| ||||||||||||||||| |||| |||| ||| |||||||| ||||||||||| | |||||   | | ||||||||||| |||||    
T  17325602 tcaggtgtttgttcgattcagattgtcagatcaacttcaatccggtgcagatccaaccaatgactttgtcgtcatcatagttacagatccggaggcatga 17325503  T
Q  275 ttattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
     ||||||  |||||  ||||||||||||| | ||||| | ||||||||| | |||||||    
T  17325502 ctattccagagattttaatatagtcatatatgtaggcttatgtactttgtcattttatg 17325444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 120 - 333
Target Start/End: Complemental strand, 28389103 - 28388890
Alignment:
Q  120 gacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggt-atttgatcggttcagattgtcagatcagcttcgatcca 218  Q
    ||||||||||| || |||||||||  ||| |||| ||||||  || |||||||| ||| || ||||| || ||||||||||||| |||||||| ||||||    
T  28389103 gacgttggtttatttgtcgtctttacgcggcgtt-gtttgtcatttttgtttctttcaagtcatttgttcagttcagattgtcatatcagcttagatcca 28389005  T
Q  219 gtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgta 318  Q
    ||| ||||| ||||||||||||||   || |||| | ||||||||| |||| |||  ||||||| ||| |  |||||| |||||||| ||| | ||||||    
T  28389004 gtgaagatcaaatcaatgactttggtgtcgtccatgttgcagatccagagatatgggtattccggagacttgaatataatcatatgtgtagacttttgta 28388905  T
Q  319 ctttgccgttttatg 333  Q
     ||||  ||||||||    
T  28388904 ttttgttgttttatg 28388890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 333
Target Start/End: Complemental strand, 12524585 - 12524446
Alignment:
Q  194 agattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaat 293  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||   ||||| ||| || ||||||  |||||||||| ||  | ||| |  |||    
T  12524585 agattgtcagatcaactttgatccagtgtagatccaatcaatgactttggtgtcatcaacgttgtagatccaaagacatgattgtttaggagactttaat 12524486  T
Q  294 atagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||| |||||| | ||||| ||||||||||| | |||||||    
T  12524485 ataatcatatttgtaggcttttgtactttgtcattttatg 12524446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 323
Target Start/End: Original strand, 13080252 - 13080476
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtg--cgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcaga 196  Q
    ||||||||| |||||| |||| |||||| ||| |||||||||||||||  ||||||| |||||| |||||||||  | ||||||||||| |||| ||| |    
T  13080252 gtgatttcgtcgtcttagtgcaacgttgttttattcgtcgtctttgtgtgcgacgtt-gtttgtctttcttgttcgt-tcaggtatttgttcggatcaaa 13080349  T
Q  197 ttgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatata 296  Q
    || ||| ||||||||  |||||| | | ||| ||||| |||||||  ||||||| ||| || |||||||||| ||||  ||||||| ||| |  |||||     
T  13080350 ttatcatatcagcttaaatccagggcatatcgaatcattgacttttgcatcatcaacgttgtagatccggagtcatgggtattccggagacttgaatatt 13080449  T
Q  297 gtcatatgtataggcatttgtactttg 323  Q
    ||||||| | || |  |||||||||||    
T  13080450 gtcatatatgtatgtttttgtactttg 13080476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 99 - 237
Target Start/End: Original strand, 41988251 - 41988388
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | |||||| ||||||||||| |||||| |||||||||||||| | ||||||||| ||| |||||||  | | ||||||| | | ||||| ||    
T  41988251 gtgattttgtcgtcttagtgcgacgttgttttgtttgtcgtctttgtgcggc-tttgtttgtcttttttgtttcgtttaagtatttgtttgtttcaggtt 41988349  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatga 237  Q
    |||| ||||||||| || ||||| |||| ||||||||||    
T  41988350 gtcatatcagcttcaatgcagtgcagattcaatcaatga 41988388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 303
Target Start/End: Complemental strand, 2555234 - 2555163
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatat 303  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||| ||||||| ||| |  |||||||||||||    
T  2555234 caatgactttgacgtcatcaacgttgcagatccggagacatgagtattccggagacttgaatatagtcatat 2555163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 313
Target Start/End: Complemental strand, 42512903 - 42512792
Alignment:
Q  202 agatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcat 301  Q
    |||| ||||| |||| ||||| ||||||| ||||||||||||| ||||| ||| |||||||  |||||| ||| |||| |||||| |  |||||||||||    
T  42512903 agattagctttgatcaagtgttgatccaaacaatgactttgacgtcatcaacgttgcagatatggagacgtgaatatttcgaagactttaatatagtcat 42512804  T
Q  302 atgtataggcat 313  Q
    || | |||||||    
T  42512803 atttgtaggcat 42512792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 333
Target Start/End: Original strand, 7151040 - 7151143
Alignment:
Q  230 atcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttt 329  Q
    ||||||||||||| | ||||| ||| ||||||||| ||||||| | ||||||||||| |  ||||||||||| | | ||||  | ||||||||| |||||    
T  7151040 atcaatgactttggcgtcatcaacgttgcagatccagagacattagtattccgaagacttgaatatagtcatgtttgtaggtttatgtactttgtcgttt 7151139  T
Q  330 tatg 333  Q
    ||||    
T  7151140 tatg 7151143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 37425095 - 37425158
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgttt 162  Q
    ||||||| | |||||| ||||||||||| |||||| |||||||||||||||||||  |||||||    
T  37425095 gtgattttgtcgtctttgtgcgacgttgttttgtttgtcgtctttgtgcgacgttgttttgttt 37425158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 332
Target Start/End: Original strand, 14535105 - 14535229
Alignment:
Q  208 gcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattc-cgaagattgaaatatagtcatatgta 306  Q
    |||| |||| ||||||||| ||||||||||||||  | ||||| ||| |||||||||||| |||||| |||||  |  | ||| |||||| |||||| ||    
T  14535105 gctttgatcaagtgtagattcaatcaatgacttttgcgtcatcaacgttgcagatccggatacatgagtattcttgtggcttg-aatataatcatattta 14535203  T
Q  307 taggcatttgtactttgccgttttat 332  Q
    ||| ||| |||||| |||||||||||    
T  14535204 tagacatatgtactctgccgttttat 14535229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 333
Target Start/End: Original strand, 23428489 - 23428590
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    ||||||||||| | || || ||| || |||||||||||||||| |||| || |||   |||||||||||||| | |||||||  ||||||| ||||||||    
T  23428489 caatgactttggcgtcgtcaacgttgtagatccggagacatgagtatttcggagacataaatatagtcatatttgtaggcataggtacttttccgtttta 23428588  T
Q  332 tg 333  Q
    ||    
T  23428589 tg 23428590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 333
Target Start/End: Complemental strand, 32347574 - 32347497
Alignment:
Q  256 tgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||||||||||||||| ||||||||| |    ||||||||||||| | |||||||   |||||||||||||||||    
T  32347574 tgcagatccggagacatgagtattccgaaaacatgaatatagtcatatttgtaggcataactactttgccgttttatg 32347497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 264
Target Start/End: Original strand, 35455266 - 35455355
Alignment:
Q  175 tcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatcc 264  Q
    |||||| |||| ||||||||  || ||||||||||||||||| | ||||||| |||||||| ||||||   ||||| ||| |||||||||    
T  35455266 tcaggtgtttgttcggttcaagttttcagatcagcttcgatcgaatgtagattcaatcaataactttggtgtcatcaacgttgcagatcc 35455355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 294 - 333
Target Start/End: Original strand, 3495139 - 3495178
Alignment:
Q  294 atagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  3495139 atagtcatatgtgtaagcatttgtactttgccgttttatg 3495178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 303
Target Start/End: Original strand, 6635485 - 6635556
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatat 303  Q
    ||||||||||| | || || ||| ||||||||||||||||||| ||||||| |||||  |||||| ||||||    
T  6635485 caatgactttggcgtcgtcaacgttgcagatccggagacatgagtattccggagatttgaatataatcatat 6635556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 280
Target Start/End: Original strand, 17687429 - 17687484
Alignment:
Q  225 atccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattc 280  Q
    |||| ||||||||||||||| ||||| | | ||||||||||||||||||| |||||    
T  17687429 atccgatcaatgactttgacgtcatcaatgttgcagatccggagacatgagtattc 17687484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 333
Target Start/End: Complemental strand, 11734661 - 11734619
Alignment:
Q  291 aatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||||||||| | ||||||| |||||||||||||||||||    
T  11734661 aatatagtcatatttgtaggcatatgtactttgccgttttatg 11734619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 333
Target Start/End: Original strand, 29098050 - 29098127
Alignment:
Q  256 tgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||||  |||||||||  |||||| ||| |  ||||||||||||| | ||||||| ||||| |||||||||||||    
T  29098050 tgcagatcaagagacatgaggattccggagacttgaatatagtcatatttgtaggcatatgtaccttgccgttttatg 29098127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 25770795 - 25770847
Alignment:
Q  190 gttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttg 242  Q
    ||||| ||||||||||||| | |||||||||| |||| ||||| |||||||||    
T  25770795 gttcaaattgtcagatcagttccgatccagtgcagattcaatcgatgactttg 25770847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 320
Target Start/End: Complemental strand, 39416121 - 39416053
Alignment:
Q  252 acgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtact 320  Q
    |||||||||||||||| |||||| |||| ||| |||   ||||||||||||| | ||||||| ||||||    
T  39416121 acgctgcagatccggaaacatgagtatttcgatgatatgaatatagtcatatttgtaggcatatgtact 39416053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 36628 - 36856
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||      |||| |||||||| |||||||||||||| |||||||||    
T  36628 gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttt------tttttttgtttctctcaggtatttgatcagttcagatt 36721  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| |||||||||||||||||||| | ||||||||| |||||||||||| ||| | |||||| | ||||| |||||||||    
T  36722 gtcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggatacagggttattctggagatttaaatatagt 36821  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||||| |||||||||||| |||||||    
T  36822 catatgtgtaggcaattgtactttgccattttatg 36856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 99 - 333
Target Start/End: Original strand, 244735 - 244966
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||| | |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||    
T  244735 gtgattttgtcgtcttcgtgcgaccttggtttgttcgtcgtctttgtgcgacgtt-gtttgtttttcttgtttctctcaggtatttgaccggttcagatt 244833  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||||||||||||||||| |||||||||||||||||||| | ||||||||| || |||| |||||| |||||||||||| ||||| ||   |||     
T  244834 gtcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgtagattcggagatatgattattccggagatttaa--ttagc 244931  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
     |||||| |||||| ||||||||||||||||||||    
T  244932 gatatgtgtaggcaattgtactttgccgttttatg 244966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 135; Significance: 3e-70; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 9672 - 9440
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| ||||||||| ||||||||||| ||||||| |||||||||||||||| |||||||| ||||||||| | |||||||| |||  || |||||    
T  9672 gtgatttcgtcgtcttcgtacgacgttggtt-gttcgtcttctttgtgcgacgttt-tttgttttccttgtttctcttaggtatttaatcactttagatt 9575  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
     ||| |||||||||||||||||| |||| ||||||||||||||| | ||||||||| |||||||||||| ||||| |||||||||||||| |||||||||    
T  9574 atcatatcagcttcgatccagtgcagattcaatcaatgactttggcgtcatccacgttgcagatccggaaacatggttattccgaagatttaaatatagt 9475  T
Q  299 catatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||| |||||||||||||||||||||||||||    
T  9474 catatgtgtaggcatttgtactttgccgttttatg 9440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 113 - 333
Target Start/End: Original strand, 11127 - 11344
Alignment:
Q  113 ttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagcttc 212  Q
    ||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||| ||||||||||||||| || ||||||||| ||||||||     
T  11127 ttcgtgcgacgttggtttgttcgccgtctttatgcgacgtt-gtttgtttttcttgtttctctcaggtatttgatcgatttagattgtcaaatcagcttg 11225  T
Q  213 gatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggca 312  Q
    |||| |||| | |||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||  |||||  | |||||||  |||  ||||||    
T  11226 gatctagtgcatatccaatcaatgactttgacgtcatccacgttgcagatccggagacatggttattccagagatttgagtatagtc--atgcgtaggca 11323  T
Q  313 tttgtactttgccgttttatg 333  Q
     ||||||||||||||||||||    
T  11324 attgtactttgccgttttatg 11344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 99 - 272
Target Start/End: Complemental strand, 1142 - 970
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| | |||||||| ||||||||||||||||| |||||| |||||  || ||||||||||||||||||| ||||||||||||||||||||||||    
T  1142 gtgatttcgtcatcttcgtgtgacgttggtttgttcgttgtctttttgcgaaatt-gtttgtttttcttgtttctctcaggtatttgatcggttcagatt 1044  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacat 272  Q
    ||||||||||||||||||||||| |||||||||||||||||||| | ||||||||| |||||||| | ||||||    
T  1043 gtcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatctgaagacat 970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 99 - 286
Target Start/End: Complemental strand, 1156 - 970
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| |||||||||||||||||||||||| ||||||||| ||| | |||| |||||||| ||  ||||||||||| | |||||| |||    
T  1156 gtgatttcgtcgtcttagtgcgacgttggtttgttcgtcgtatttgtgcgaagtt-gattgtctttcttgtatcgttcaggtatttgtttggttcaaatt 1058  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaaga 286  Q
    ||||||||| |||||||| |||| |||||||||||||||| ||  | || |||| | ||||||||||||||||||| ||||| |||||    
T  1057 gtcagatcaacttcgatctagtgcagatccaatcaatgacattagcgtcgtccatgttgcagatccggagacatgagtattctgaaga 970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 272
Target Start/End: Complemental strand, 6789 - 6630
Alignment:
Q  110 gtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagc 209  Q
    ||||| |||| |||||||||||||||||||||  ||||| ||||  ||||| |||||||||||  ||||| |||||||||||| |||||||||||||| |    
T  6789 gtcttagtgcaacgttggtttgttcgtcgtct--gtgcggcgtta-tttgtctttcttgtttcgttcaggcatttgatcggtttagattgtcagatcaac 6693  T
Q  210 ttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacat 272  Q
    ||||||| | || | ||||||||||  |||| | | ||||||||  |||||||||||||||||    
T  6692 ttcgatcaactgaaaatccaatcaacaacttcggcgtcatccacattgcagatccggagacat 6630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 191 - 333
Target Start/End: Complemental strand, 25436 - 25294
Alignment:
Q  191 ttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattga 290  Q
    ||||||||||||||| ||||| |||||| || |||||||| |||||| |||| | ||||| ||| |||||||||| || ||||  ||||||| |||||      
T  25436 ttcagattgtcagattagctttgatccaatgcagatccaaccaatgattttggcgtcatcaacgttgcagatccgaaggcatggctattccggagatttt 25337  T
Q  291 aatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    ||||||||||||| | ||||| | ||||||||||| |||||||    
T  25336 aatatagtcatatttgtaggcctatgtactttgccattttatg 25294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1294 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 189 - 333
Target Start/End: Original strand, 962 - 1107
Alignment:
Q  189 ggttcagattgtcagatcagcttcgatc-cagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagat 287  Q
    ||||||||||||||||||| |||||||  ||||| | |||||||||||||||||||| || || | | |||| ||||| | |||||  |||||||| ||     
T  962 ggttcagattgtcagatcaacttcgatttcagtgcacatccaatcaatgactttgacgtcgtcaatgttgcatatccgcatacatgggtattccgatgac 1061  T
Q  288 tgaaatatagtcatatgtataggcatttgtactttgccgttttatg 333  Q
    |  ||||||||||||||| ||||| ||||||||||| |||||||||    
T  1062 ttgaatatagtcatatgtgtaggcttttgtactttgtcgttttatg 1107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 110 - 247
Target Start/End: Complemental strand, 10315 - 10179
Alignment:
Q  110 gtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtcagatcagc 209  Q
    ||||| |||||||||||||||||||||||||||||||| |   |||||||| |||||||||||    ||||||||| | || ||| |||||||||| |||    
T  10315 gtcttagtgcgacgttggtttgttcgtcgtctttgtgc-attgttgtttgtctttcttgtttcgtctaggtatttgtttggatcaaattgtcagattagc 10217  T
Q  210 ttcgatccagtgtagatccaatcaatgactttgacatc 247  Q
    || |||||| || ||||||||||||||| |||| ||||    
T  10216 tttgatccaatggagatccaatcaatgattttgtcatc 10179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 99 - 333
Target Start/End: Complemental strand, 11793 - 11558
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtt-tgtttttcttgtttctatcaggtatttgatcggttcagat 197  Q
    ||||||||  |||||| |||||| |||| ||||   |||| ||||||||||||||  || | ||||| || ||||  ||| ||||||| ||  |||||||    
T  11793 gtgatttcatcgtcttagtgcgaagttgttttgcctgtcgactttgtgcgacgttatttgtcttttttttttttcgttcatgtatttgttcaattcagat 11694  T
Q  198 tgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatag 297  Q
    ||||| |||||||||||||||||| ||||| ||||||||| ||||   || || ||| ||||||||| || |||||  ||||| | ||| | ||||||||    
T  11693 tgtcaaatcagcttcgatccagtgcagatcaaatcaatgattttggagtcgtcaacgttgcagatccagaaacatgggtattctggagacttaaatatag 11594  T
Q  298 tcatatgtataggcatttgtactttgccgttttatg 333  Q
    |||||||| ||||| ||  |||||| || |||||||    
T  11593 tcatatgtgtaggctttaatactttaccattttatg 11558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 304
Target Start/End: Complemental strand, 137073 - 136885
Alignment:
Q  99 gtgatttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgtttgtttgtttttcttgtttctatcaggtatttgatcggttcagatt 198  Q
    ||||||||| |||||| || |||||||| ||||||| |||||||||||||||||| |||||||||||||||||                 || |||||||    
T  137073 gtgatttcgtcgtcttagtacgacgttgttttgttcatcgtctttgtgcgacgtt-gtttgtttttcttgtttt----------------ggctcagatt 136991  T
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagt 298  Q
    ||||||||| |||||||| |||| ||||| |||||| |||||||   || || ||| ||||||||| ||||||||  ||||||| ||| | |||||||||    
T  136990 gtcagatcaacttcgatcaagtgcagatcaaatcaacgactttggagtcgtcaacgttgcagatccagagacatgggtattccggagacttaaatatagt 136891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 328
Target Start/End: Complemental strand, 91338 - 91191
Alignment:
Q  180 tatttgatcggttcagattgtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattatt 279  Q
    |||||| |||||||| ||||||| ||||| || ||||||||||||||| |||| ||||||||| | |  |||||| ||||||| ||| ||||||| ||||    
T  91338 tatttgttcggttcaaattgtcaaatcagttttgatccagtgtagatcaaatc-atgactttggcgttgtccacgttgcagattcggtgacatgagtatt 91240  T
Q  280 ccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtt 328  Q
    ||| | | |  ||||| ||||||| | ||||| ||||||||||| ||||    
T  91239 ccggacacttgaatatggtcatatatgtaggcttttgtactttgtcgtt 91191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 333
Target Start/End: Original strand, 35321 - 35422
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgccgtttta 331  Q
    ||||||||||| | || || ||| |||||||||||| |||||| ||||||| ||| |  ||||| ||||||| ||||||||| |||||||| | ||||||    
T  35321 caatgactttggcgtcgtcaacgttgcagatccggatacatgagtattccggagacttgaatattgtcatatttataggcatatgtactttactgtttta 35420  T
Q  332 tg 333  Q
    ||    
T  35421 tg 35422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 303
Target Start/End: Original strand, 74401 - 74472
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatat 303  Q
    ||||||||||| |||| || ||| ||||||||||||||||||| |||||||||||    |||||||||||||    
T  74401 caatgactttggcatcgtcaacgttgcagatccggagacatgagtattccgaagacatgaatatagtcatat 74472  T

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Target: scaffold0388 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 267
Target Start/End: Original strand, 10147 - 10215
Alignment:
Q  199 gtcagatcagcttcgatccagtgtagatccaatcaatgactttgacatcatccacgctgcagatccgga 267  Q
    ||||||| || ||||||||||||||||| || ||||||| |||||| || || ||| ||||||||||||    
T  10147 gtcagattagtttcgatccagtgtagatacattcaatgattttgacgtcgtcaacgttgcagatccgga 10215  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 333
Target Start/End: Original strand, 105264 - 105372
Alignment:
Q  225 atccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgtactttgc 324  Q
    |||||| ||||||||||| | ||||| ||| ||||||||||||| ||||  |||| || |||||  ||||||||||||| | ||||| | | |||||||     
T  105264 atccaaccaatgactttggcgtcatcaacgttgcagatccggaggcatggctatttcggagattttaatatagtcatatttgtaggcttatatactttgt 105363  T
Q  325 cgttttatg 333  Q
     ||||||||    
T  105364 tgttttatg 105372  T

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Target: scaffold0999 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0999
Description:

Target: scaffold0999; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 218 - 333
Target Start/End: Original strand, 1921 - 2036
Alignment:
Q  218 agtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatatgtataggcatttgt 317  Q
    |||| |||||| ||||||||||||| | ||||| ||| ||||||||  ||||||| | ||||||| |||    | ||||||| ||| | ||||||| |||    
T  1921 agtgcagatccgatcaatgactttggcgtcatcaacgttgcagatcgagagacataagtattccggagacatgattatagtcgtatttgtaggcatatgt 2020  T
Q  318 actttgccgttttatg 333  Q
    |||||| |||||||||    
T  2021 actttgtcgttttatg 2036  T

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Target: scaffold0121 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 303
Target Start/End: Complemental strand, 13129 - 13058
Alignment:
Q  232 caatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatat 303  Q
    ||||||||||||| || || ||| |||||||||| |||||||| ||||||| ||||   |||||||||||||    
T  13129 caatgactttgacgtcgtcaacgttgcagatccgtagacatgagtattccggagatatgaatatagtcatat 13058  T

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Target: scaffold0432 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 303
Target Start/End: Complemental strand, 2340 - 2255
Alignment:
Q  218 agtgtagatccaatcaatgactttgacatcatccacgctgcagatccggagacatgattattccgaagattgaaatatagtcatat 303  Q
    |||| |||||| ||||||||||||| | || || | | ||||||||||||||||||| ||||| | ||| |  |||||||||||||    
T  2340 agtgcagatccgatcaatgactttggcgtcgtcaatgttgcagatccggagacatgagtattctggagacttgaatatagtcatat 2255  T

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