View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1519_low_79 (Length: 276)
Name: NF1519_low_79
Description: NF1519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1519_low_79 |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 11 - 262
Target Start/End: Original strand, 45637428 - 45637684
Alignment:
| Q |
11 |
cagagatcacaatgagaggaagccgatggatggatggcacttctaatcctagtgttgcaaatgtagtggaaaatgttatataagcaaattgtgatgaaag |
110 |
Q |
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| T |
45637428 |
cagaaatcacaatgagaggaagccgatggatggatggcacttctaatcttagtgttgcaaatgcagtggaaaatgttatataagcaaattgtgatgaaag |
45637527 |
T |
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| Q |
111 |
aagcttttcggactatttcaaccatggttgtgactaagaatcatatggagttaagcaataatacttgattatttacataattggatttatatag-----t |
205 |
Q |
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| T |
45637528 |
aagcttttcggactatttcaaccatggttgtgactaagaatcatatggaattaaacaataatacttgattatttacataattggatttatatagtcgtat |
45637627 |
T |
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| Q |
206 |
cgtagcttgcatataaattgtttcattatatttttgttttatgttaccataaaaaag |
262 |
Q |
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| T |
45637628 |
cgtagcttgcatataaattgtttcattatatttttgttttatgttaccataaaaaag |
45637684 |
T |
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