View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1519_low_86 (Length: 265)
Name: NF1519_low_86
Description: NF1519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1519_low_86 |
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Alignment Details
Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 15 - 255
Target Start/End: Original strand, 25577900 - 25578140
Alignment:
| Q |
15 |
aaaaggaacagagggtgaattttgttttttatcttgttaagaatacgctaacaaaatgtaactttgttaagatttgttattcaattcacagtatgaaatt |
114 |
Q |
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| T |
25577900 |
aaaaggaacagagggtgaattttgttttttatcttgttaagaatacgctaaccaaatgtaactttgttaagatttgttattcaattcacagtatgaaatt |
25577999 |
T |
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| Q |
115 |
aagatttgatcatggatagtggtcatatacgcagcatctgtaggtgttatactaacctgtcaaaaacaaccgggacaataattattttggtgcgctcttt |
214 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
25578000 |
aagatttgatcatggatagtggtcatatacgcagcatctgtaggtgttatactaacctgtcaaaaacaaacgggacaataattattttggtgcgctcttt |
25578099 |
T |
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| Q |
215 |
atgttcaaatgtagtttttgtgattattttttccgcctttg |
255 |
Q |
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|||||||||||||||||||||||||||||||||||| |||| |
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| T |
25578100 |
atgttcaaatgtagtttttgtgattattttttccgcttttg |
25578140 |
T |
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