View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1519_low_96 (Length: 250)

Name: NF1519_low_96
Description: NF1519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1519_low_96
NF1519_low_96
[»] chr8 (8 HSPs)
chr8 (119-191)||(44106521-44106593)
chr8 (127-235)||(28917029-28917137)
chr8 (127-235)||(11698113-11698221)
chr8 (127-235)||(34853582-34853690)
chr8 (127-192)||(8885249-8885314)
chr8 (127-235)||(42280688-42280796)
chr8 (174-235)||(36165681-36165742)
chr8 (127-163)||(28423747-28423783)
[»] chr7 (18 HSPs)
chr7 (127-235)||(42925437-42925545)
chr7 (127-238)||(37518060-37518171)
chr7 (127-238)||(19225395-19225506)
chr7 (127-235)||(42864898-42865007)
chr7 (127-192)||(31643337-31643402)
chr7 (127-235)||(36629457-36629565)
chr7 (127-235)||(43737336-43737444)
chr7 (127-192)||(47202784-47202849)
chr7 (127-191)||(9152089-9152153)
chr7 (127-191)||(7115066-7115130)
chr7 (128-191)||(3304549-3304612)
chr7 (127-162)||(26554960-26554995)
chr7 (127-190)||(28230289-28230352)
chr7 (127-192)||(8155196-8155261)
chr7 (130-238)||(24041997-24042104)
chr7 (202-235)||(36468409-36468442)
chr7 (203-235)||(3936362-3936394)
chr7 (127-191)||(43186083-43186147)
[»] chr5 (17 HSPs)
chr5 (127-235)||(39524992-39525100)
chr5 (128-235)||(15957965-15958072)
chr5 (128-235)||(31928923-31929030)
chr5 (127-235)||(6156947-6157055)
chr5 (127-235)||(14112081-14112189)
chr5 (125-231)||(38692577-38692684)
chr5 (127-192)||(12464915-12464980)
chr5 (127-192)||(32841768-32841833)
chr5 (127-235)||(37183578-37183686)
chr5 (127-235)||(38372517-38372625)
chr5 (128-235)||(31221137-31221244)
chr5 (149-238)||(24203502-24203592)
chr5 (127-233)||(26190119-26190225)
chr5 (128-235)||(26898601-26898708)
chr5 (128-235)||(7884409-7884517)
chr5 (127-235)||(20891829-20891936)
chr5 (127-235)||(33487827-33487935)
[»] chr4 (22 HSPs)
chr4 (127-235)||(25752240-25752348)
chr4 (128-235)||(46440070-46440177)
chr4 (127-235)||(25491192-25491300)
chr4 (128-180)||(4936520-4936572)
chr4 (127-192)||(3703052-3703117)
chr4 (127-192)||(7931961-7932026)
chr4 (127-235)||(19835782-19835890)
chr4 (152-235)||(32442072-32442155)
chr4 (128-192)||(49397316-49397380)
chr4 (125-192)||(2505826-2505893)
chr4 (129-192)||(25538777-25538840)
chr4 (127-192)||(29822885-29822950)
chr4 (127-192)||(38536476-38536541)
chr4 (127-235)||(40703926-40704034)
chr4 (127-192)||(52089559-52089624)
chr4 (128-190)||(49001353-49001415)
chr4 (125-163)||(53836079-53836117)
chr4 (127-235)||(18050986-18051094)
chr4 (127-188)||(27741910-27741971)
chr4 (128-192)||(23524092-23524156)
chr4 (127-163)||(47456939-47456975)
chr4 (128-188)||(53893824-53893884)
[»] chr2 (14 HSPs)
chr2 (127-235)||(42894631-42894739)
chr2 (128-235)||(41510222-41510329)
chr2 (127-192)||(17474590-17474655)
chr2 (127-231)||(44465532-44465636)
chr2 (125-192)||(25217564-25217631)
chr2 (127-235)||(5507673-5507782)
chr2 (127-235)||(27670750-27670858)
chr2 (128-238)||(38065370-38065480)
chr2 (127-235)||(41854695-41854804)
chr2 (127-235)||(38308624-38308732)
chr2 (127-191)||(33452234-33452298)
chr2 (202-235)||(32187736-32187769)
chr2 (202-235)||(41203053-41203086)
chr2 (202-238)||(15994980-15995016)
[»] chr1 (16 HSPs)
chr1 (128-235)||(34006515-34006622)
chr1 (127-235)||(42546222-42546329)
chr1 (127-235)||(45046647-45046755)
chr1 (127-235)||(40907731-40907839)
chr1 (127-235)||(49786522-49786630)
chr1 (128-235)||(28866428-28866535)
chr1 (127-235)||(18583341-18583449)
chr1 (127-235)||(41584462-41584570)
chr1 (125-235)||(44572895-44573005)
chr1 (128-163)||(6099739-6099774)
chr1 (128-163)||(6099919-6099954)
chr1 (128-163)||(26230366-26230401)
chr1 (127-180)||(800690-800742)
chr1 (202-235)||(26723360-26723393)
chr1 (202-235)||(49677737-49677770)
chr1 (202-235)||(52744715-52744748)
[»] chr6 (10 HSPs)
chr6 (127-235)||(2539705-2539813)
chr6 (128-235)||(2813020-2813129)
chr6 (128-235)||(17264664-17264770)
chr6 (127-235)||(3717079-3717187)
chr6 (127-235)||(4508099-4508207)
chr6 (127-192)||(5639158-5639223)
chr6 (127-192)||(14587358-14587423)
chr6 (127-191)||(237096-237160)
chr6 (127-235)||(21514828-21514936)
chr6 (202-235)||(5699820-5699853)
[»] chr3 (15 HSPs)
chr3 (127-235)||(28873260-28873368)
chr3 (130-231)||(51540427-51540528)
chr3 (128-235)||(38977546-38977653)
chr3 (128-235)||(51258658-51258765)
chr3 (127-235)||(3351863-3351971)
chr3 (127-235)||(3902603-3902711)
chr3 (127-192)||(47302316-47302381)
chr3 (127-235)||(50716507-50716615)
chr3 (127-235)||(50796232-50796340)
chr3 (127-235)||(34821140-34821248)
chr3 (127-235)||(35142328-35142435)
chr3 (127-192)||(43472765-43472830)
chr3 (127-192)||(2358419-2358484)
chr3 (127-235)||(4394233-4394341)
chr3 (202-235)||(35345781-35345814)
[»] scaffold0027 (2 HSPs)
scaffold0027 (127-162)||(141791-141826)
scaffold0027 (202-235)||(141836-141869)
[»] scaffold0508 (1 HSPs)
scaffold0508 (127-189)||(3190-3252)
[»] scaffold0010 (1 HSPs)
scaffold0010 (131-235)||(140739-140844)


Alignment Details
Target: chr8 (Bit Score: 73; Significance: 2e-33; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 44106593 - 44106521
Alignment:
Q  119 tgggtctagaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttga 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44106593 tgggtctagaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttga 44106521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 28917137 - 28917029
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | |||||||||||||||   ||||||||||||||||||||||||||         |||||||||||||||||||| ||||    
T  28917137 gaattttggattttgaggggcggagtcccataagaagttccttctaagggagtcatggtccttgaattttttctgattttctggggaagtttcggagcaa 28917038  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  28917037 tccgatcaa 28917029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 11698113 - 11698221
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | ||||||| ||||| |   |||||| |||||||||||||||||||         |||||||||||||||||||| |||     
T  11698113 gaattttggattttgaggggcggagtcccgtaagacgtcccttctatgggagtcatggtccttgaattttttctgattttctggggaagtttcggagcat 11698212  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  11698213 tccgatcaa 11698221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 34853690 - 34853582
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    |||||||  |||||||||| | |||||||| ||||||    |||||||||||||||||||||||||         ||||| |||||||||||||| ||||    
T  34853690 gaattttttattttgaggggcggagtcccagaagaagtcctttctaagggagtcatggtccttgaattttttctgattttatggggaagtttcggagcaa 34853591  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  34853590 tccgatcaa 34853582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 8885249 - 8885314
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaa 192  Q
    ||||||||||||||||||| | ||||||  |||||||   |||||| |||||||||||||||||||    
T  8885249 gaattttggattttgaggggcggagtcctgtaagaagtcccttctacgggagtcatggtccttgaa 8885314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 42280688 - 42280796
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | ||||||  |||||||   |||||| |||||| ||||||||||||         |||||||||||||||||||  | ||    
T  42280688 gaattttggattttgaggggcggagtcctgtaagaagtcccttctaggggagttatggtccttgaactttttttgattttctggggaagtttcgaagtaa 42280787  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  42280788 tccgatcaa 42280796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 36165681 - 36165742
Alignment:
Q  174 gggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaatccgatcaa 235  Q
    |||||||||||||||||||         |||||||||||||||||||| |||||||||||||    
T  36165681 gggagtcatggtccttgaattttttctgattttctggggaagtttcggagcaatccgatcaa 36165742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 28423783 - 28423747
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaag 163  Q
    ||||||||||||||||||||  |||||||||||||||    
T  28423783 gaattttggattttgagggatggagtcccataagaag 28423747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 42925437 - 42925545
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | |||||||||||||||   ||||||||||||||||||||||||||         |||||||||| ||||||||| ||||    
T  42925437 gaattttggattttgaggggcggagtcccataagaagtcccttctaagggagtcatggtccttgaattgtttctgattttctgggtaagtttcggagcaa 42925536  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  42925537 tccgatcaa 42925545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 238
Target Start/End: Original strand, 37518060 - 37518171
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | ||||||  |||||||   |||||| |||||||||||||||||||         |||||||||||||||||||| ||||    
T  37518060 gaattttggattttgaggggcggagtcctgtaagaagtctcttctatgggagtcatggtccttgaattttttctgattttctggggaagtttcggagcaa 37518159  T
Q  227 tccgatcaaata 238  Q
    ||||||||||||    
T  37518160 tccgatcaaata 37518171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 238
Target Start/End: Original strand, 19225395 - 19225506
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | ||||||  |||||||   |||||| |||||||||| ||||||||         |||||||||||||||||||| ||||    
T  19225395 gaattttggattttgaggggcggagtcctgtaagaagttccttctatgggagtcatgttccttgaattttttctgattttctggggaagtttcggagcaa 19225494  T
Q  227 tccgatcaaata 238  Q
    ||||||||||||    
T  19225495 tccgatcaaata 19225506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 42864898 - 42865007
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaac-ttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgca 225  Q
    ||||||||||||||||||| | |||||||||||||||   | |||||||||||||||||||||||||         |||||||||||| ||||| | |||    
T  42864898 gaattttggattttgaggggcggagtcccataagaagtctctttctaagggagtcatggtccttgaattgtttctaattttctggggatgtttcagagca 42864997  T
Q  226 atccgatcaa 235  Q
    ||||||||||    
T  42864998 atccgatcaa 42865007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 31643402 - 31643337
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaa 192  Q
    |||||||||||||||||||   |||||||||||||||   ||||||||||||||||||||||||||    
T  31643402 gaattttggattttgaggggtggagtcccataagaagttccttctaagggagtcatggtccttgaa 31643337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 36629565 - 36629457
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    |||||||||||||||| |||  ||||||| |||||||   |||||| |||||||||||||||||||         ||||| |||||||||||||| ||||    
T  36629565 gaattttggattttgaaggatggagtcccgtaagaagtcccttctacgggagtcatggtccttgaattttttctgattttttggggaagtttcggagcaa 36629466  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  36629465 tccgatcaa 36629457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 43737444 - 43737336
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||| ||||||||||| | |||||||| ||||||   ||||||||||||||||||||||||||         |||||||||| || |||||| ||||    
T  43737444 gaattttagattttgaggggcggagtcccacaagaagttccttctaagggagtcatggtccttgaattttttctgattttctgggaaaatttcggagcaa 43737345  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  43737344 tccgatcaa 43737336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 47202849 - 47202784
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaa 192  Q
    ||||||||||||||||||| | ||||||| |||||||   |||||| |||||||||||||||||||    
T  47202849 gaattttggattttgaggggcggagtcccttaagaagtcccttctatgggagtcatggtccttgaa 47202784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 9152153 - 9152089
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttga 191  Q
    ||||||||||||||||||| | ||||||| |||||||   |||||| ||||||||||||||||||    
T  9152153 gaattttggattttgaggggcggagtcccgtaagaagtcccttctaggggagtcatggtccttga 9152089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 7115066 - 7115130
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttga 191  Q
    ||||||||||||||||||||  ||||||| |||||||   |||||||||||||| || |||||||    
T  7115066 gaattttggattttgagggaaggagtcccgtaagaagtcccttctaagggagtcttgatccttga 7115130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 191
Target Start/End: Original strand, 3304549 - 3304612
Alignment:
Q  128 aattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttga 191  Q
    |||||||||||||||||| | ||||||| |||||||   ||||||  |||||||||||||||||    
T  3304549 aattttggattttgaggggcggagtcccgtaagaagtcccttctagaggagtcatggtccttga 3304612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Original strand, 26554960 - 26554995
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaa 162  Q
    ||||||||||||||||||| ||||||||||||||||    
T  26554960 gaattttggattttgaggggcagagtcccataagaa 26554995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 28230289 - 28230352
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttg 190  Q
    ||||||| |||||||||||   ||||||||||| ||||   |||||||||||||||||||||||    
T  28230289 gaattttagattttgaggggtggagtcccataataaggtctttctaagggagtcatggtccttg 28230352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 8155261 - 8155196
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaa 192  Q
    ||||||||||||||||||| | ||||||| |||||||   ||| || |||||||||| ||||||||    
T  8155261 gaattttggattttgaggggcggagtcccgtaagaagttccttgtacgggagtcatgatccttgaa 8155196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 24041997 - 24042104
Alignment:
Q  130 ttttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaatcc 229  Q
    |||||||||||||||| | ||||||| |||||||   |  |||  ||||||||||||||||||         |||||||||||||||||||| ||| |||    
T  24041997 ttttggattttgaggggcggagtcccgtaagaagtccca-ctacaggagtcatggtccttgaattttttctgattttctggggaagtttcggagcagtcc 24042095  T
Q  230 gatcaaata 238  Q
    |||||||||    
T  24042096 gatcaaata 24042104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 36468409 - 36468442
Alignment:
Q  202 attttctggggaagtttcggcgcaatccgatcaa 235  Q
    |||||||||||||||||||| |||||||||||||    
T  36468409 attttctggggaagtttcggagcaatccgatcaa 36468442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 235
Target Start/End: Complemental strand, 3936394 - 3936362
Alignment:
Q  203 ttttctggggaagtttcggcgcaatccgatcaa 235  Q
    ||||||||||||||||||| |||||||||||||    
T  3936394 ttttctggggaagtttcggagcaatccgatcaa 3936362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 43186147 - 43186083
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttga 191  Q
    |||||||||||||| |||| | ||||||| |||||||   |||||||||||||| || |||||||    
T  43186147 gaattttggatttttaggggcggagtcccgtaagaagtcccttctaagggagtcttgatccttga 43186083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 39525100 - 39524992
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| |||||||||| ||||||   ||||||||||||||||||||||||||         ||||||||||||| |||||| ||||    
T  39525100 gaattttggattttgaggggcagagtcccacaagaagttccttctaagggagtcatggtccttgaattttttctgattttctggggaaatttcggagcaa 39525001  T
Q  227 tccgatcaa 235  Q
    || ||||||    
T  39525000 tctgatcaa 39524992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 15958072 - 15957965
Alignment:
Q  128 aattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaat 227  Q
    |||||||||||||||| | |  ||||||||||||||   ||||||||||||| ||||||||||||         |||||||||||||||||||| |||||    
T  15958072 aattttggattttgagaggcgaagtcccataagaagtcgcttctaagggagttatggtccttgaattttttctgattttctggggaagtttcggagcaat 15957973  T
Q  228 ccgatcaa 235  Q
    ||||||||    
T  15957972 ccgatcaa 15957965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 31928923 - 31929030
Alignment:
Q  128 aattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaat 227  Q
    ||||||||||||||| || | |||||||  ||||||   ||||||||||||||||||||||||||         |||||||||||||||||||| |||||    
T  31928923 aattttggattttgaagggcggagtcccgcaagaagtcccttctaagggagtcatggtccttgaattttttctgattttctggggaagtttcggagcaat 31929022  T
Q  228 ccgatcaa 235  Q
    ||||||||    
T  31929023 ccgatcaa 31929030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 6157055 - 6156947
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | ||||||| |||||||   || ||| |||||||||||||||||||         |||||||||| ||||||||| ||||    
T  6157055 gaattttggattttgaggggcggagtcccgtaagaagtccctactacgggagtcatggtccttgaattttttctgattttctgggaaagtttcggagcaa 6156956  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  6156955 tccgatcaa 6156947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 14112189 - 14112081
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | ||||||| |||||||   |||||| |||| ||||||||||||||         |||||||||||||||||||| ||||    
T  14112189 gaattttggattttgaggggcggagtcccgtaagaagtcccttctatgggattcatggtccttgaattttttctgattttctggggaagtttcggagcaa 14112090  T
Q  227 tccgatcaa 235  Q
    ||| |||||    
T  14112089 tcctatcaa 14112081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 38692577 - 38692684
Alignment:
Q  125 tagaattttggattttgagggacagagtcccataagaaggaactt-ctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcg 223  Q
    ||||||||||||||||||||| | ||||||| |||||||   ||| |||||||||||||||||||||||         ||||| |||||||||||||| |    
T  38692577 tagaattttggattttgaggggcggagtcccgtaagaagtcccttcctaagggagtcatggtccttgaattttttctgattttttggggaagtttcggag 38692676  T
Q  224 caatccga 231  Q
    ||||||||    
T  38692677 caatccga 38692684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 12464915 - 12464980
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaa 192  Q
    ||||||||||||||||||| ||||||||| |||||||   ||||||  ||||||||||||||||||    
T  12464915 gaattttggattttgaggggcagagtcccgtaagaagttccttctataggagtcatggtccttgaa 12464980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 32841768 - 32841833
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaa 192  Q
    ||||||||||||||||||| | |||||||||||||||   |||||| |||||||||| ||||||||    
T  32841768 gaattttggattttgaggggcggagtcccataagaagtcccttctaggggagtcatgatccttgaa 32841833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 37183578 - 37183686
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | ||||||| ||||| |   |||||| |||||||||||||||||||         ||||| |||||| ||||||| ||||    
T  37183578 gaattttggattttgaggggcggagtcccgtaagatgtcccttctacgggagtcatggtccttgaattttttctgattttatggggatgtttcggagcaa 37183677  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  37183678 tccgatcaa 37183686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 38372625 - 38372517
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    |||||||||||||||||||   ||||||| |||||||   ||||||||| ||||||||||||||||         || ||||||||||||||||| || |    
T  38372625 gaattttggattttgaggggtggagtcccgtaagaagtctcttctaaggaagtcatggtccttgaattttttctgatcttctggggaagtttcggagcga 38372526  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  38372525 tccgatcaa 38372517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 31221137 - 31221244
Alignment:
Q  128 aattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaat 227  Q
    |||||||||||||||||| | ||||| | |||||||   |||||| || ||||| ||||||||||         |||||||||||||||||||| |||||    
T  31221137 aattttggattttgaggggcggagtctcgtaagaagtcccttctatggaagtcacggtccttgaattttttctgattttctggggaagtttcggagcaat 31221236  T
Q  228 ccgatcaa 235  Q
    ||||||||    
T  31221237 ccgatcaa 31221244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 238
Target Start/End: Original strand, 24203502 - 24203592
Alignment:
Q  149 gagtcccataagaaggaacttctaagggagtcatggtccttgaa-nnnnnnnnnattttctggggaagtttcggcgcaatccgatcaaata 238  Q
    |||||||||||||||   ||||||||||||||||||||||||||          ||||||| |||||||||||| ||||||||||||||||    
T  24203502 gagtcccataagaagtcccttctaagggagtcatggtccttgaattttttcatgattttcttgggaagtttcggagcaatccgatcaaata 24203592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 233
Target Start/End: Original strand, 26190119 - 26190225
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | ||||||| |||||||   |||||| ||||||||||||| |||||         ||||| |||||||||||| | ||||    
T  26190119 gaattttggattttgaggggcggagtcccttaagaagttccttctaggggagtcatggtcgttgaattttttttgattttttggggaagtttcagagcaa 26190218  T
Q  227 tccgatc 233  Q
    |||||||    
T  26190219 tccgatc 26190225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 26898601 - 26898708
Alignment:
Q  128 aattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaat 227  Q
    |||||||||||||||||| | ||||||  |||||||   ||||||  ||||||||||||||||||         ||||| |||| ||||||||| |||||    
T  26898601 aattttggattttgaggggcggagtcctgtaagaagtcccttctacaggagtcatggtccttgaattttttctgattttttgggcaagtttcggagcaat 26898700  T
Q  228 ccgatcaa 235  Q
    ||||||||    
T  26898701 ccgatcaa 26898708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 7884517 - 7884409
Alignment:
Q  128 aattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttct-ggggaagtttcggcgcaa 226  Q
    |||||| ||||||||||| | |||| || |||||||   |||||| |||||||||||||||||||         ||||| | ||||||||||||| ||||    
T  7884517 aattttagattttgaggggcggagttccgtaagaagtctcttctacgggagtcatggtccttgaatgttttctgattttataggggaagtttcggagcaa 7884418  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  7884417 tccgatcaa 7884409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 20891936 - 20891829
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    |||||||||||||||| |||| || |||| |||||||   ||| || |||||||||| ||||||||          ||||||||||||||||||| ||||    
T  20891936 gaattttggattttgaaggacggaatcccgtaagaagtcccttgtaggggagtcatgatccttgaattttttctg-ttttctggggaagtttcggagcaa 20891838  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  20891837 tccgatcaa 20891829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 33487935 - 33487827
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    |||||||||||||| |||| | | |||||| ||||||   ||||||||||||||||| |||||||          |||||||||||||||||||| ||||    
T  33487935 gaattttggatttttaggggcggggtcccaaaagaagtcccttctaagggagtcatgatccttgacttttttctgattttctggggaagtttcggagcaa 33487836  T
Q  227 tccgatcaa 235  Q
      |||||||    
T  33487835 atcgatcaa 33487827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 25752240 - 25752348
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | ||||||| |||||||   ||||||||||||||||||||||||||         |||||||||||||||||||| ||||    
T  25752240 gaattttggattttgaggggcggagtcccgtaagaagtctcttctaagggagtcatggtccttgaatcttttctgattttctggggaagtttcggagcaa 25752339  T
Q  227 tccgatcaa 235  Q
    || ||||||    
T  25752340 tctgatcaa 25752348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 46440070 - 46440177
Alignment:
Q  128 aattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaat 227  Q
    |||||||||||||||||| | ||||||| |||||||   |||||  |||||||||||||||||||         |||||||||||||||||||| |||||    
T  46440070 aattttggattttgaggggcggagtcccgtaagaagtcccttctttgggagtcatggtccttgaattttttctgattttctggggaagtttcggagcaat 46440169  T
Q  228 ccgatcaa 235  Q
    ||||||||    
T  46440170 ccgatcaa 46440177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 25491192 - 25491300
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||||| || |||| | |||||   ||||||||||||||||||||||||||         ||||||||||||| ||| || ||||    
T  25491192 gaattttggattttgagggacggaatcccttgagaagtcccttctaagggagtcatggtccttgaactttttctgattttctggggaaattttggagcaa 25491291  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  25491292 tccgatcaa 25491300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 4936520 - 4936572
Alignment:
Q  128 aattttggattttgagggacagagtcccataagaaggaacttctaagggagtc 180  Q
    |||||||||||||||||||| ||||||||||||||| | ||||||||||||||    
T  4936520 aattttggattttgagggacggagtcccataagaagtatcttctaagggagtc 4936572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 3703052 - 3703117
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaa 192  Q
    |||||||||||||||| |||| |||||||||||||||  | |||||||||||||||| || |||||    
T  3703052 gaattttggattttgaaggacggagtcccataagaagtcatttctaagggagtcatgatctttgaa 3703117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 7932026 - 7931961
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaa 192  Q
    ||||||||||||||||||| | ||||||| |||||||   |||||| |||||||||||||||||||    
T  7932026 gaattttggattttgaggggcggagtcccgtaagaagtcccttctaggggagtcatggtccttgaa 7931961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 19835890 - 19835782
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | ||||||| |||||||   ||| || |||||||||||| ||||||         |||||||||| ||||||||| ||||    
T  19835890 gaattttggattttgaggggcggagtcccgtaagaagtcccttttaggggagtcatggtacttgaattttttctgattttctgggaaagtttcggagcaa 19835791  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  19835790 tccgatcaa 19835782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 32442155 - 32442072
Alignment:
Q  152 tcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaatccgatcaa 235  Q
    ||||||||||||   ||||||||||||||||||||||||||         |||||||||||||||||| | |||||||||||||    
T  32442155 tcccataagaagtctcttctaagggagtcatggtccttgaattttttctgattttctggggaagtttcagagcaatccgatcaa 32442072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 49397380 - 49397316
Alignment:
Q  128 aattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaa 192  Q
    |||||||||||||||||| | || ||||||||||||   ||||| ||||||||||||||||||||    
T  49397380 aattttggattttgaggggccgaatcccataagaagtttcttcttagggagtcatggtccttgaa 49397316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 192
Target Start/End: Original strand, 2505826 - 2505893
Alignment:
Q  125 tagaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaa 192  Q
    ||||||||||||||||||||| |||| |||| |||||||   |||||  |||||||||||||||||||    
T  2505826 tagaattttggattttgaggggcagaatcccgtaagaagtcccttcttggggagtcatggtccttgaa 2505893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 25538777 - 25538840
Alignment:
Q  129 attttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaa 192  Q
    ||||||||||||||||| | ||||||| |||||||   ||||||||||||||||| ||||||||    
T  25538777 attttggattttgaggggcggagtcccgtaagaagtctcttctaagggagtcatgttccttgaa 25538840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 29822950 - 29822885
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaa 192  Q
    |||||||| |||||||||| ||||||||| || ||||   |||||| |||||||||||||||||||    
T  29822950 gaattttgaattttgaggggcagagtcccgtaggaagtcccttctacgggagtcatggtccttgaa 29822885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 38536541 - 38536476
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaa 192  Q
    ||||||||||||||||||| | |||||||||||||||    |||||| ||||| ||||||||||||    
T  38536541 gaattttggattttgaggggcggagtcccataagaagtcctttctaaaggagttatggtccttgaa 38536476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 40704034 - 40703926
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||| ||||||||||| | ||||||| |||||||   ||||||| | ||||||||||||||||         ||||||||||||||||||   ||||    
T  40704034 gaattttagattttgaggggcggagtcccgtaagaagttccttctaatgaagtcatggtccttgaattttttctgattttctggggaagtttcttagcaa 40703935  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  40703934 tccgatcaa 40703926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 52089624 - 52089559
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaa 192  Q
    ||||||||||||||||||| | ||||||| |||||||   |||||| |||||| ||||||||||||    
T  52089624 gaattttggattttgaggggcggagtcccgtaagaagtcccttctatgggagttatggtccttgaa 52089559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 190
Target Start/End: Original strand, 49001353 - 49001415
Alignment:
Q  128 aattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttg 190  Q
    |||||||||||||||||  | ||||||| |||||||   ||||||||||||||||| ||||||    
T  49001353 aattttggattttgaggagcggagtcccgtaagaagtcccttctaagggagtcatgatccttg 49001415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 163
Target Start/End: Original strand, 53836079 - 53836117
Alignment:
Q  125 tagaattttggattttgagggacagagtcccataagaag 163  Q
    ||||||||||||||||||||||| ||||||| |||||||    
T  53836079 tagaattttggattttgagggacggagtcccgtaagaag 53836117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 18050986 - 18051094
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | || |||| ||| |||   |||||| ||||||||||||||||||          |||||||||| ||||||||| ||||    
T  18050986 gaattttggattttgaggggcggaatcccgtaaaaagttccttctacgggagtcatggtccttgatttttttttgattttctgggaaagtttcggagcaa 18051085  T
Q  227 tccgatcaa 235  Q
    || ||||||    
T  18051086 tctgatcaa 18051094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 188
Target Start/End: Original strand, 27741910 - 27741971
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtcct 188  Q
    ||||||||||||||||||| | |||||||||||||||   |||||| ||||| |||| ||||    
T  27741910 gaattttggattttgaggggcggagtcccataagaagttccttctacgggaggcatgatcct 27741971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 23524156 - 23524092
Alignment:
Q  128 aattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaa 192  Q
    |||||||||||||||||| |  |||||||||| |||   |||||  |||||||||||||||||||    
T  23524156 aattttggattttgaggggcgaagtcccataataagtcccttcttcgggagtcatggtccttgaa 23524092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 47456975 - 47456939
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaag 163  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  47456975 gaattttggattttgagggacggagttccataagaag 47456939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 188
Target Start/End: Original strand, 53893824 - 53893884
Alignment:
Q  128 aattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtcct 188  Q
    |||||||||||||||||| | ||| |||||||||||   |||||| |||||| ||||||||    
T  53893824 aattttggattttgaggggcggagacccataagaagtcccttctacgggagtgatggtcct 53893884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 42894739 - 42894631
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | ||||||| |||||||   ||||||||||||||||||||||||||         |||||||||||||||||||| | ||    
T  42894739 gaattttggattttgaggggcggagtcccgtaagaagttccttctaagggagtcatggtccttgaattttttctaattttctggggaagtttcggagtaa 42894640  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  42894639 tccgatcaa 42894631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 41510222 - 41510329
Alignment:
Q  128 aattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaat 227  Q
    ||||||||||||||||||   |||||||||||||||   |||||||| |||||||||||||||||         ||||||| |||||||||||| |||||    
T  41510222 aattttggattttgaggggtggagtcccataagaagttccttctaagagagtcatggtccttgaattttttctgattttctagggaagtttcggagcaat 41510321  T
Q  228 ccgatcaa 235  Q
    ||||||||    
T  41510322 ccgatcaa 41510329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 17474590 - 17474655
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaa 192  Q
    ||||||||||||||||||| | ||||||| |||||||   ||||||||||||||||||||||||||    
T  17474590 gaattttggattttgaggggcggagtcccgtaagaagtttcttctaagggagtcatggtccttgaa 17474655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 231
Target Start/End: Original strand, 44465532 - 44465636
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | ||||||| |||||||   |||||| |||||||||||||||||||         ||||||||||||| |||||| ||||    
T  44465532 gaattttggattttgaggggcggagtcccgtaagaagtcccttctaggggagtcatggtccttgaattttttctgattttctggggaaatttcggagcaa 44465631  T
Q  227 tccga 231  Q
    |||||    
T  44465632 tccga 44465636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 192
Target Start/End: Original strand, 25217564 - 25217631
Alignment:
Q  125 tagaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaa 192  Q
    ||||||||||||||||||||| | ||||||| |||||||   |||||| |||||||||||||||||||    
T  25217564 tagaattttggattttgaggggcggagtcccgtaagaagtcccttctatgggagtcatggtccttgaa 25217631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 5507782 - 5507673
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaa-nnnnnnnnnattttctggggaagtttcggcgca 225  Q
    ||||||||||||||||||| | |||| ||||||||||   |||||| |||||||||| ||||||||          |||||||||||||||||||| |||    
T  5507782 gaattttggattttgaggggcggagttccataagaagtttcttctatgggagtcatgatccttgaatttttttctgattttctggggaagtttcggagca 5507683  T
Q  226 atccgatcaa 235  Q
    ||||||||||    
T  5507682 atccgatcaa 5507673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 27670858 - 27670750
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    |||||||| |||||||||| | ||||||||||||| |   |||||||||||||||||||| |||||         ||||| |||| ||||||||| ||||    
T  27670858 gaattttgaattttgaggggcggagtcccataagaggtctcttctaagggagtcatggtcgttgaattttttctgattttatgggaaagtttcggagcaa 27670759  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  27670758 tccgatcaa 27670750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 38065370 - 38065480
Alignment:
Q  128 aattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaat 227  Q
    |||||||||||||||||| | ||||||| |||||||   ||||||  ||||||||| ||||||||         ||||| |||| ||||||||| |||||    
T  38065370 aattttggattttgaggggcggagtcccgtaagaagtctcttctacaggagtcatgatccttgaattttttctgattttatgggaaagtttcggagcaat 38065469  T
Q  228 ccgatcaaata 238  Q
    |||||||||||    
T  38065470 ccgatcaaata 38065480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 41854695 - 41854804
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaa-nnnnnnnnnattttctggggaagtttcggcgca 225  Q
    ||||||||||||||||||| | |||||||||||||||   ||||||| || |||||| ||||||||          |||||||||||||||||| | |||    
T  41854695 gaattttggattttgaggggcggagtcccataagaagttccttctaatggtgtcatgatccttgaatttttttctgattttctggggaagtttcagagca 41854794  T
Q  226 atccgatcaa 235  Q
    ||||||||||    
T  41854795 atccgatcaa 41854804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 38308624 - 38308732
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | |||||| |||| ||    ||||||||||||||||| ||||||||         |||||||||||||||||| | ||||    
T  38308624 gaattttggattttgaggggcggagtccaataaaaattcccttctaagggagtcatgatccttgaattttttctgattttctggggaagtttcagagcaa 38308723  T
Q  227 tccgatcaa 235  Q
    || ||||||    
T  38308724 tctgatcaa 38308732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 33452234 - 33452298
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttga 191  Q
    ||||||||||||||||||| | ||||||| |||||||   ||| || ||||||||||||||||||    
T  33452234 gaattttggattttgaggggcggagtcccgtaagaagtcgcttttatgggagtcatggtccttga 33452298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 32187736 - 32187769
Alignment:
Q  202 attttctggggaagtttcggcgcaatccgatcaa 235  Q
    |||||||||||||||||||| |||||||||||||    
T  32187736 attttctggggaagtttcggagcaatccgatcaa 32187769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 41203053 - 41203086
Alignment:
Q  202 attttctggggaagtttcggcgcaatccgatcaa 235  Q
    |||||||||||||||||||| |||||||||||||    
T  41203053 attttctggggaagtttcggagcaatccgatcaa 41203086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 15994980 - 15995016
Alignment:
Q  202 attttctggggaagtttcggcgcaatccgatcaaata 238  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  15994980 attttatggggaagtttcggagcaatccgatcaaata 15995016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 34006622 - 34006515
Alignment:
Q  128 aattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaat 227  Q
    |||||||||||||||||||| ||||||| |||||||   |||||| |||||||||| ||||||||         |||||||||||||||||||| |||||    
T  34006622 aattttggattttgagggacggagtcccgtaagaagtcccttctacgggagtcatgatccttgaattttttctgattttctggggaagtttcggagcaat 34006523  T
Q  228 ccgatcaa 235  Q
    ||||||||    
T  34006522 ccgatcaa 34006515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 42546329 - 42546222
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | ||||||| |||||||   ||||||||||||||||||||||| ||         |||||||||||||||||||| ||||    
T  42546329 gaattttggattttgaggg-cggagtcccgtaagaagttccttctaagggagtcatggtccttaaattttttctgattttctggggaagtttcggagcaa 42546231  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  42546230 tccgatcaa 42546222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 45046647 - 45046755
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | ||||| |||||||||   ||||||||||||||||||||||||||         ||||| |||| ||||||||| ||||    
T  45046647 gaattttggattttgaggggcggagtctcataagaagtcccttctaagggagtcatggtccttgaattttttctgattttttgggcaagtttcggagcaa 45046746  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  45046747 tccgatcaa 45046755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 40907731 - 40907839
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | |||||||||||||||   ||| || | |||||||| ||||||||         |||||||||||||||||||| ||||    
T  40907731 gaattttggattttgaggggcggagtcccataagaagtcccttttatgagagtcatgatccttgaattttttctgattttctggggaagtttcggagcaa 40907830  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  40907831 tccgatcaa 40907839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 49786630 - 49786522
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | ||||| |||||||||   |||||| |||||||||||||||||||         ||||| |||||||||||| | ||||    
T  49786630 gaattttggattttgaggggcggagtctcataagaagtctcttctacgggagtcatggtccttgaattttttctgattttttggggaagtttcagagcaa 49786531  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  49786530 tccgatcaa 49786522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 28866428 - 28866535
Alignment:
Q  128 aattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaat 227  Q
    |||||||||||||||||| | ||||||| || ||||   ||||||||||||||| ||||||||||         ||||| |||||||||||||| |||||    
T  28866428 aattttggattttgaggggcggagtcccgtaggaagtgccttctaagggagtcacggtccttgaattttttctaattttttggggaagtttcggagcaat 28866527  T
Q  228 ccgatcaa 235  Q
    ||||||||    
T  28866528 ccgatcaa 28866535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 18583341 - 18583449
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | ||||||| |||||||   |||||| ||||||| |||||||||||         ||||| |||||||||||| | ||||    
T  18583341 gaattttggattttgaggggcggagtcccgtaagaagtctcttctatgggagtcgtggtccttgaatttgttctgattttttggggaagtttcagagcaa 18583440  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  18583441 tccgatcaa 18583449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 41584462 - 41584570
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||| |||| |||||| | ||||||| |||||||   |||||| |||||||||||||||||||         |||||||||| ||||||||| ||||    
T  41584462 gaattttagattgtgaggggcggagtcccgtaagaagtcccttctatgggagtcatggtccttgaattttttctgattttctgggcaagtttcggagcaa 41584561  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  41584562 tccgatcaa 41584570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 235
Target Start/End: Original strand, 44572895 - 44573005
Alignment:
Q  125 tagaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgc 224  Q
    |||||||||| ||||||| || | ||||||| |||||||   |||||| |||||||||||||||||||         ||||| |||||||||||||| ||    
T  44572895 tagaattttgaattttgatgggcggagtcccctaagaagtctcttctatgggagtcatggtccttgaattttttctgattttatggggaagtttcggagc 44572994  T
Q  225 aatccgatcaa 235  Q
    |||| ||||||    
T  44572995 aatctgatcaa 44573005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 6099739 - 6099774
Alignment:
Q  128 aattttggattttgagggacagagtcccataagaag 163  Q
    |||||||||||||||||| |||||||||||||||||    
T  6099739 aattttggattttgaggggcagagtcccataagaag 6099774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 6099919 - 6099954
Alignment:
Q  128 aattttggattttgagggacagagtcccataagaag 163  Q
    |||||||||||||||||| |||||||||||||||||    
T  6099919 aattttggattttgaggggcagagtcccataagaag 6099954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Complemental strand, 26230401 - 26230366
Alignment:
Q  128 aattttggattttgagggacagagtcccataagaag 163  Q
    |||||| |||||||||||||||||||||||||||||    
T  26230401 aattttagattttgagggacagagtcccataagaag 26230366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 800690 - 800742
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtc 180  Q
    ||||||||||||||||||| ||||||||| |||||||   ||||||||||||||    
T  800690 gaattttggattttgaggg-cagagtcccgtaagaagtcccttctaagggagtc 800742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 26723360 - 26723393
Alignment:
Q  202 attttctggggaagtttcggcgcaatccgatcaa 235  Q
    |||||||||||||||||||| |||||||||||||    
T  26723360 attttctggggaagtttcggagcaatccgatcaa 26723393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 49677770 - 49677737
Alignment:
Q  202 attttctggggaagtttcggcgcaatccgatcaa 235  Q
    |||||||||||||||||||| |||||||||||||    
T  49677770 attttctggggaagtttcggagcaatccgatcaa 49677737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 52744715 - 52744748
Alignment:
Q  202 attttctggggaagtttcggcgcaatccgatcaa 235  Q
    |||||||||||||||||||| |||||||||||||    
T  52744715 attttctggggaagtttcggagcaatccgatcaa 52744748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 2539813 - 2539705
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | ||||||| |||||||  ||||||| | |||||||||||||||||         |||||||||| ||||||||| ||||    
T  2539813 gaattttggattttgaggggcggagtcccgtaagaagtcacttctatgagagtcatggtccttgaattttttctgattttctgggcaagtttcggagcaa 2539714  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  2539713 tccgatcaa 2539705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 2813020 - 2813129
Alignment:
Q  128 aattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaa--nnnnnnnnnattttctggggaagtttcggcgca 225  Q
    ||||||||||||||||||   |||||||||||||||    |||||||||||||||||||||||||           |||||||||||||||||||| |||    
T  2813020 aattttggattttgaggggtggagtcccataagaagtccattctaagggagtcatggtccttgaattttttttctgattttctggggaagtttcggagca 2813119  T
Q  226 atccgatcaa 235  Q
    ||||||||||    
T  2813120 atccgatcaa 2813129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 17264770 - 17264664
Alignment:
Q  128 aattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaat 227  Q
    ||||||||||||||||||||  |||||| |||||||   |||||| |||||||||||||||||||         |||||||||||||||||||| |||||    
T  17264770 aattttggattttgagggacgaagtcccgtaagaagtcccttctaggggagtcatggtccttgaa-tttttctgattttctggggaagtttcggagcaat 17264672  T
Q  228 ccgatcaa 235  Q
    || |||||    
T  17264671 cccatcaa 17264664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 3717079 - 3717187
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | ||||||| |||||||   |||||| ||||| |||||||||||||         ||||| |||||| ||||||| ||||    
T  3717079 gaattttggattttgaggggcggagtcccgtaagaagtctcttctaggggagccatggtccttgaattttttctgattttttggggatgtttcggagcaa 3717178  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  3717179 tccgatcaa 3717187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 4508099 - 4508207
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | ||||||| |||||||   |||||  |||||||||||||||||||         |||||||| ||||||||||| ||||    
T  4508099 gaattttggattttgaggggcggagtcccttaagaagtctcttctgtgggagtcatggtccttgaattgtttctgattttctgcggaagtttcggagcaa 4508198  T
Q  227 tccgatcaa 235  Q
    ||| |||||    
T  4508199 tccaatcaa 4508207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 5639223 - 5639158
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaa 192  Q
    ||||||||||||||||||| | ||||||| |||||||   ||||||| ||||||||||||||||||    
T  5639223 gaattttggattttgaggggcggagtcccgtaagaagtctcttctaaaggagtcatggtccttgaa 5639158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 14587358 - 14587423
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaa 192  Q
    ||||||||||||||||| | | ||||||| |||||||   |||||||||||||| |||||||||||    
T  14587358 gaattttggattttgagtggcggagtcccgtaagaagttccttctaagggagtcttggtccttgaa 14587423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 237160 - 237096
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttga 191  Q
    ||||||||||||||||||| | ||||||| |||||||   ||||||||||| || ||||||||||    
T  237160 gaattttggattttgaggggcggagtcccgtaagaagacccttctaagggattcttggtccttga 237096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 21514828 - 21514936
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaa-nnnnnnnnnattttctggggaagtttcggcgca 225  Q
    ||||||||||||||||||| | ||||||| |||||||   ||||||||||||| ||| ||||||||          ||||| |||||||||||||| |||    
T  21514828 gaattttggattttgaggggcggagtcccgtaagaagtcccttctaagggagt-atgatccttgaatttttttctaattttatggggaagtttcggagca 21514926  T
Q  226 atccgatcaa 235  Q
    ||||||||||    
T  21514927 atccgatcaa 21514936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 5699853 - 5699820
Alignment:
Q  202 attttctggggaagtttcggcgcaatccgatcaa 235  Q
    |||||||||||||||||||| |||||||||||||    
T  5699853 attttctggggaagtttcggagcaatccgatcaa 5699820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 28873368 - 28873260
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | ||||||| |||||||   |||||| |||||||||| ||||||||         |||||||||||||||||||| ||||    
T  28873368 gaattttggattttgaggggcggagtcccgtaagaagtctcttctaggggagtcatgttccttgaattttttctaattttctggggaagtttcggagcaa 28873269  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  28873268 tccgatcaa 28873260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 231
Target Start/End: Original strand, 51540427 - 51540528
Alignment:
Q  130 ttttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaatcc 229  Q
    |||||||||||||||| |||| |||||| |||||   ||||||||||||||||||||||||||         ||||| |||||||||||||| |||||||    
T  51540427 ttttggattttgaggggcagaatcccatgagaagtcccttctaagggagtcatggtccttgaattttttcggattttttggggaagtttcggagcaatcc 51540526  T
Q  230 ga 231  Q
    ||    
T  51540527 ga 51540528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 38977546 - 38977653
Alignment:
Q  128 aattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaat 227  Q
    |||||||||||||||||| | |||||||| ||||||   |||||| |||||||| ||||||||||         ||||||||||||||||| || |||||    
T  38977546 aattttggattttgaggggcggagtcccacaagaagtcccttctacgggagtcacggtccttgaattttttcttattttctggggaagttttggagcaat 38977645  T
Q  228 ccgatcaa 235  Q
    ||||||||    
T  38977646 ccgatcaa 38977653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 235
Target Start/End: Complemental strand, 51258765 - 51258658
Alignment:
Q  128 aattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaat 227  Q
    |||||||||||||||||| | ||||||| |||||||   |||||| |||||||||| ||||||||         |||||||||| ||||||||| |||||    
T  51258765 aattttggattttgaggggcggagtcccgtaagaagtcccttctacgggagtcatgatccttgaattttttctgattttctgggaaagtttcggagcaat 51258666  T
Q  228 ccgatcaa 235  Q
    ||||||||    
T  51258665 ccgatcaa 51258658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 3351863 - 3351971
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||| ||||||||||| | |||||||||||||||   |||||| ||||||||| |||| ||||         ||||||| |||||||||||| ||||    
T  3351863 gaattttagattttgaggggcggagtcccataagaagtcccttctacgggagtcattgtccctgaattttttctgattttctagggaagtttcggagcaa 3351962  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  3351963 tccgatcaa 3351971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 3902603 - 3902711
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | ||||||| ||||||    |||||||||| |||||||||||||||         |||||||||| ||||||| | ||||    
T  3902603 gaattttggattttgaggggcggagtcccgtaagaaattccttctaagggtgtcatggtccttgaattttttctgattttctgggcaagtttccgagcaa 3902702  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  3902703 tccgatcaa 3902711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 47302381 - 47302316
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaa 192  Q
    ||||||||||||||||||| ||||||||| |||||||   |||||| |||||||||| ||||||||    
T  47302381 gaattttggattttgaggggcagagtcccgtaagaagtcccttctatgggagtcatgatccttgaa 47302316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 50716615 - 50716507
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | || |||| |||||||   ||||||  |||||||||||||||||          |||||||||||||||||||| ||||    
T  50716615 gaattttggattttgaggggcggaatcccgtaagaagtctcttctagaggagtcatggtccttgagttttttctgattttctggggaagtttcggagcaa 50716516  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  50716515 tccgatcaa 50716507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 50796232 - 50796340
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | || |||| |||||||   ||||||  |||||||||||||||||          |||||||||||||||||||| ||||    
T  50796232 gaattttggattttgaggggcggaatcccgtaagaagtctcttctagaggagtcatggtccttgagttttttctgattttctggggaagtttcggagcaa 50796331  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  50796332 tccgatcaa 50796340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 34821140 - 34821248
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | || |||| |||||||   |||||| | |||||||||||||||||         |||||||||||||||||| | || |    
T  34821140 gaattttggattttgaggggcggactcccgtaagaagtcccttctatgagagtcatggtccttgaattttttctgattttctggggaagtttcagagcga 34821239  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  34821240 tccgatcaa 34821248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 35142435 - 35142328
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    |||||||||||||| |||| | ||| ||| |||||||   |||||| |||||||||||||||||||         ||||||| |||||||||||| ||||    
T  35142435 gaattttggatttttaggggcggagccccgtaagaagtcccttctacgggagtcatggtccttgaattttttctgattttct-gggaagtttcggagcaa 35142337  T
Q  227 tccgatcaa 235  Q
    |||||||||    
T  35142336 tccgatcaa 35142328  T

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Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 43472765 - 43472830
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaa 192  Q
    ||||||||||||||||||| | ||||||| |||||||   ||||||  ||||||||||||||||||    
T  43472765 gaattttggattttgaggggcggagtcccgtaagaagtcccttctagaggagtcatggtccttgaa 43472830  T

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Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 2358419 - 2358484
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaa 192  Q
    ||||||| ||||||||||| |  |||||| |||||||   |||||| |||||||||||||||||||    
T  2358419 gaattttagattttgaggggcgtagtcccgtaagaagtcccttctaggggagtcatggtccttgaa 2358484  T

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Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 4394341 - 4394233
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnnattttctggggaagtttcggcgcaa 226  Q
    ||||||||||||||||||| | || |||| ||| |||   |||||| ||||||||||||||||||          |||||||||| ||||||||| ||||    
T  4394341 gaattttggattttgaggggcggaatcccgtaaaaagttccttctacgggagtcatggtccttgatttttttttgattttctgggaaagtttcggagcaa 4394242  T
Q  227 tccgatcaa 235  Q
    || ||||||    
T  4394241 tctgatcaa 4394233  T

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Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 35345781 - 35345814
Alignment:
Q  202 attttctggggaagtttcggcgcaatccgatcaa 235  Q
    |||||||||||||||||||| |||||||||||||    
T  35345781 attttctggggaagtttcggagcaatccgatcaa 35345814  T

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Target: scaffold0027 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Original strand, 141791 - 141826
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaa 162  Q
    ||||||||||||||||||| ||||||||||||||||    
T  141791 gaattttggattttgaggggcagagtcccataagaa 141826  T

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Target: scaffold0027; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 141836 - 141869
Alignment:
Q  202 attttctggggaagtttcggcgcaatccgatcaa 235  Q
    |||||||||||||||||||| |||||||||||||    
T  141836 attttctggggaagtttcggagcaatccgatcaa 141869  T

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Target: scaffold0508 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 3190 - 3252
Alignment:
Q  127 gaattttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtcctt 189  Q
    |||||||||||||||||||   | |||||||||||||   |||||||||| ||||||||||||    
T  3190 gaattttggattttgaggggtggggtcccataagaagtcccttctaagggggtcatggtcctt 3252  T

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Target: scaffold0010 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 235
Target Start/End: Complemental strand, 140844 - 140739
Alignment:
Q  131 tttggattttgagggacagagtcccataagaaggaacttctaagggagtcatggtccttgaannnnnnnnn-attttctggggaagtttcggcgcaatcc 229  Q
    ||||||||||||||| |  |||||| |||||||   ||| || |||||||||||||||||||          |||||||||||||||||||| |||||||    
T  140844 tttggattttgaggggcgaagtcccgtaagaagtcccttttatgggagtcatggtccttgaatttttttctgattttctggggaagtttcggagcaatcc 140745  T
Q  230 gatcaa 235  Q
    ||||||    
T  140744 gatcaa 140739  T

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