View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15200_low_3 (Length: 250)

Name: NF15200_low_3
Description: NF15200
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15200_low_3
NF15200_low_3
[»] chr7 (42 HSPs)
chr7 (13-250)||(21157422-21157657)
chr7 (62-211)||(22687038-22687194)
chr7 (66-250)||(17811503-17811702)
chr7 (119-249)||(20570720-20570857)
chr7 (61-249)||(5058686-5058887)
chr7 (112-249)||(26565376-26565520)
chr7 (114-181)||(39182388-39182455)
chr7 (116-250)||(5715445-5715582)
chr7 (113-181)||(8329873-8329941)
chr7 (114-181)||(8329809-8329876)
chr7 (112-178)||(4574965-4575031)
chr7 (113-187)||(8346360-8346434)
chr7 (66-187)||(24989549-24989676)
chr7 (112-247)||(30294404-30294546)
chr7 (112-169)||(17741888-17741945)
chr7 (119-249)||(24725307-24725449)
chr7 (118-181)||(14055489-14055552)
chr7 (118-181)||(14365517-14365580)
chr7 (66-249)||(44944620-44944817)
chr7 (116-178)||(8304321-8304383)
chr7 (119-181)||(11326515-11326577)
chr7 (112-181)||(21846275-21846344)
chr7 (132-181)||(27509260-27509309)
chr7 (116-249)||(4247513-4247653)
chr7 (114-181)||(1977781-1977847)
chr7 (198-241)||(8629662-8629705)
chr7 (199-250)||(17809050-17809101)
chr7 (114-168)||(8343632-8343686)
chr7 (116-178)||(25842563-25842625)
chr7 (66-147)||(26281165-26281251)
chr7 (188-241)||(1981248-1981300)
chr7 (127-160)||(6917031-6917064)
chr7 (188-241)||(8254031-8254083)
chr7 (188-241)||(25842656-25842708)
chr7 (116-181)||(27221646-27221711)
chr7 (112-161)||(48621483-48621532)
chr7 (114-181)||(7730189-7730256)
chr7 (131-181)||(8346313-8346363)
chr7 (188-241)||(4574881-4574934)
chr7 (120-169)||(23618265-23618314)
chr7 (188-241)||(23618354-23618406)
chr7 (113-149)||(21846341-21846377)
[»] chr5 (31 HSPs)
chr5 (66-247)||(43005634-43005830)
chr5 (66-249)||(26021477-26021665)
chr5 (112-249)||(24648173-24648310)
chr5 (67-250)||(18843871-18844068)
chr5 (66-248)||(20321100-20321297)
chr5 (97-177)||(17624837-17624917)
chr5 (65-249)||(41688440-41688637)
chr5 (66-178)||(13341472-13341591)
chr5 (66-245)||(19579103-19579298)
chr5 (116-178)||(41427654-41427716)
chr5 (188-241)||(9996895-9996948)
chr5 (116-168)||(15051929-15051981)
chr5 (114-249)||(21058986-21059128)
chr5 (121-181)||(38158101-38158161)
chr5 (119-175)||(43235106-43235162)
chr5 (66-181)||(23172219-23172325)
chr5 (188-241)||(15052016-15052068)
chr5 (116-181)||(19042260-19042325)
chr5 (114-175)||(19377841-19377902)
chr5 (112-181)||(27340015-27340084)
chr5 (66-118)||(6852341-6852393)
chr5 (66-181)||(18051308-18051430)
chr5 (127-178)||(22984644-22984695)
chr5 (128-175)||(30799635-30799682)
chr5 (188-237)||(15446367-15446416)
chr5 (69-118)||(29270325-29270374)
chr5 (188-241)||(41427571-41427623)
chr5 (201-241)||(187809-187849)
chr5 (119-175)||(15446450-15446506)
chr5 (66-118)||(19979870-19979922)
chr5 (142-178)||(30804169-30804205)
[»] chr4 (37 HSPs)
chr4 (112-249)||(6346783-6346928)
chr4 (66-249)||(24719731-24719922)
chr4 (116-250)||(8010968-8011110)
chr4 (112-248)||(10394768-10394911)
chr4 (116-248)||(5375822-5375962)
chr4 (112-249)||(9149550-9149696)
chr4 (66-249)||(9770269-9770466)
chr4 (67-181)||(23064737-23064858)
chr4 (112-241)||(5943087-5943213)
chr4 (114-175)||(37240477-37240538)
chr4 (83-147)||(5884054-5884118)
chr4 (112-241)||(7452670-7452806)
chr4 (114-249)||(10143056-10143199)
chr4 (119-249)||(7044919-7045057)
chr4 (114-237)||(18459461-18459577)
chr4 (114-181)||(5361795-5361862)
chr4 (116-175)||(55476226-55476285)
chr4 (66-249)||(7045098-7045298)
chr4 (114-249)||(17466236-17466378)
chr4 (188-241)||(5884205-5884258)
chr4 (188-241)||(8409746-8409798)
chr4 (116-249)||(36120981-36121120)
chr4 (118-169)||(4157271-4157322)
chr4 (118-169)||(4157558-4157609)
chr4 (66-125)||(27528130-27528189)
chr4 (118-168)||(8889462-8889512)
chr4 (199-249)||(18403685-18403735)
chr4 (133-178)||(5884129-5884174)
chr4 (188-241)||(55476140-55476192)
chr4 (116-249)||(9911243-9911383)
chr4 (198-241)||(8020723-8020766)
chr4 (127-178)||(20812778-20812829)
chr4 (83-162)||(21314869-21314947)
chr4 (128-177)||(8743609-8743658)
chr4 (142-178)||(5845968-5846004)
chr4 (208-248)||(5846050-5846090)
chr4 (131-187)||(8931448-8931504)
[»] chr1 (28 HSPs)
chr1 (66-249)||(18304593-18304783)
chr1 (66-181)||(14074258-14074380)
chr1 (116-228)||(17055751-17055871)
chr1 (66-249)||(9351838-9352035)
chr1 (67-181)||(21846050-21846171)
chr1 (114-249)||(47786016-47786157)
chr1 (68-181)||(16125232-16125352)
chr1 (112-242)||(16434673-16434810)
chr1 (116-181)||(23528888-23528953)
chr1 (86-181)||(19009743-19009845)
chr1 (102-175)||(21242845-21242918)
chr1 (66-181)||(13100422-13100544)
chr1 (66-181)||(25146543-25146665)
chr1 (66-166)||(12513518-12513625)
chr1 (61-174)||(30619181-30619299)
chr1 (66-181)||(41032548-41032670)
chr1 (198-241)||(12002793-12002836)
chr1 (114-181)||(32881552-32881619)
chr1 (188-249)||(42179976-42180037)
chr1 (66-118)||(9954771-9954823)
chr1 (75-178)||(17197313-17197423)
chr1 (70-169)||(17869529-17869635)
chr1 (75-181)||(9954817-9954930)
chr1 (112-178)||(39845083-39845149)
chr1 (188-241)||(17197453-17197505)
chr1 (68-117)||(27917176-27917225)
chr1 (116-168)||(8773513-8773565)
chr1 (120-176)||(12002695-12002751)
[»] chr8 (29 HSPs)
chr8 (66-249)||(11879757-11879954)
chr8 (66-249)||(11897173-11897370)
chr8 (59-181)||(17647229-17647358)
chr8 (114-249)||(15761188-15761331)
chr8 (68-181)||(5922280-5922400)
chr8 (70-248)||(45403187-45403379)
chr8 (114-249)||(29384142-29384289)
chr8 (66-167)||(17566344-17566452)
chr8 (66-181)||(24414062-24414184)
chr8 (114-249)||(6810978-6811118)
chr8 (66-181)||(7489058-7489180)
chr8 (114-181)||(22910033-22910100)
chr8 (119-181)||(15294901-15294963)
chr8 (119-181)||(15475270-15475332)
chr8 (188-241)||(1018093-1018146)
chr8 (116-169)||(7262006-7262059)
chr8 (59-174)||(19704225-19704347)
chr8 (128-175)||(24056414-24056461)
chr8 (115-178)||(26574948-26575011)
chr8 (116-178)||(2040354-2040416)
chr8 (188-250)||(26575035-26575097)
chr8 (116-166)||(27836131-27836181)
chr8 (114-175)||(15231859-15231920)
chr8 (116-181)||(32424566-32424631)
chr8 (188-239)||(2040273-2040323)
chr8 (116-175)||(40541652-40541711)
chr8 (188-242)||(30240282-30240336)
chr8 (132-165)||(3094092-3094125)
chr8 (116-168)||(16752268-16752320)
[»] chr2 (35 HSPs)
chr2 (63-249)||(25538917-25539118)
chr2 (112-242)||(13502501-13502639)
chr2 (112-247)||(16766944-16767086)
chr2 (65-181)||(1405015-1405138)
chr2 (66-178)||(19245824-19245943)
chr2 (66-181)||(20063955-20064077)
chr2 (112-249)||(27406947-27407092)
chr2 (75-169)||(20034006-20034107)
chr2 (116-178)||(974573-974635)
chr2 (66-174)||(8428461-8428576)
chr2 (70-250)||(31237755-31237950)
chr2 (76-178)||(27523881-27523990)
chr2 (116-181)||(19262148-19262213)
chr2 (188-241)||(41002177-41002229)
chr2 (66-181)||(30433047-30433169)
chr2 (119-178)||(34578124-34578183)
chr2 (188-249)||(19492088-19492150)
chr2 (66-175)||(21869096-21869212)
chr2 (118-249)||(35565788-35565926)
chr2 (188-241)||(974490-974542)
chr2 (116-169)||(7302026-7302079)
chr2 (188-241)||(20034147-20034199)
chr2 (188-241)||(21869246-21869298)
chr2 (188-241)||(31023466-31023519)
chr2 (188-241)||(34578041-34578093)
chr2 (188-249)||(34841737-34841798)
chr2 (128-171)||(15627986-15628029)
chr2 (112-150)||(16767185-16767223)
chr2 (188-250)||(19519529-19519591)
chr2 (188-241)||(7301939-7301991)
chr2 (112-181)||(29661101-29661170)
chr2 (116-169)||(36430092-36430145)
chr2 (189-241)||(24473985-24474037)
chr2 (113-169)||(27749338-27749394)
chr2 (127-163)||(31062311-31062347)
[»] scaffold0186 (1 HSPs)
scaffold0186 (66-249)||(8600-8795)
[»] scaffold0016 (1 HSPs)
scaffold0016 (66-181)||(56200-56322)
[»] chr6 (35 HSPs)
chr6 (66-181)||(7223747-7223869)
chr6 (66-181)||(22498215-22498337)
chr6 (66-181)||(19748565-19748687)
chr6 (66-249)||(7918125-7918320)
chr6 (61-181)||(30912176-30912303)
chr6 (66-247)||(4841611-4841800)
chr6 (66-181)||(11327337-11327459)
chr6 (66-181)||(17543505-17543627)
chr6 (69-249)||(26053074-26053268)
chr6 (69-249)||(26073127-26073321)
chr6 (65-227)||(3573673-3573851)
chr6 (59-181)||(17103427-17103556)
chr6 (114-249)||(23897968-23898109)
chr6 (112-177)||(20432421-20432486)
chr6 (114-168)||(2912091-2912145)
chr6 (116-178)||(27890621-27890683)
chr6 (120-181)||(15527946-15528007)
chr6 (66-250)||(27233074-27233272)
chr6 (112-169)||(1179068-1179126)
chr6 (66-168)||(7621749-7621859)
chr6 (188-249)||(18490551-18490612)
chr6 (188-241)||(20399998-20400051)
chr6 (112-178)||(4596681-4596747)
chr6 (112-177)||(20399902-20399967)
chr6 (116-181)||(27614488-27614553)
chr6 (200-241)||(27890538-27890579)
chr6 (70-178)||(33592930-33593044)
chr6 (188-241)||(33593075-33593128)
chr6 (73-169)||(20981363-20981458)
chr6 (199-241)||(5422582-5422624)
chr6 (73-118)||(4594748-4594793)
chr6 (188-241)||(20432518-20432570)
chr6 (188-241)||(31108307-31108359)
chr6 (200-241)||(31407460-31407501)
chr6 (122-178)||(28669538-28669594)
[»] scaffold0048 (2 HSPs)
scaffold0048 (62-169)||(48441-48547)
scaffold0048 (63-181)||(61086-61211)
[»] chr3 (40 HSPs)
chr3 (118-249)||(42697004-42697143)
chr3 (65-181)||(10872489-10872612)
chr3 (69-241)||(27676600-27676787)
chr3 (114-181)||(17064539-17064606)
chr3 (66-181)||(24619972-24620094)
chr3 (112-236)||(6136397-6136529)
chr3 (114-250)||(25870152-25870295)
chr3 (66-249)||(28745933-28746130)
chr3 (66-178)||(8592174-8592293)
chr3 (66-166)||(41671426-41671533)
chr3 (116-236)||(13286113-13286241)
chr3 (116-181)||(20756254-20756319)
chr3 (65-145)||(6860985-6861065)
chr3 (114-181)||(28135994-28136061)
chr3 (114-180)||(3449140-3449206)
chr3 (195-241)||(15806302-15806348)
chr3 (75-167)||(3041469-3041568)
chr3 (188-241)||(6861051-6861104)
chr3 (66-178)||(8560232-8560351)
chr3 (112-169)||(17796809-17796866)
chr3 (112-169)||(19105249-19105306)
chr3 (198-250)||(10591788-10591840)
chr3 (116-168)||(22971054-22971106)
chr3 (118-181)||(22137509-22137572)
chr3 (66-168)||(29067522-29067630)
chr3 (188-241)||(9169825-9169877)
chr3 (188-241)||(18014143-18014195)
chr3 (198-241)||(8592333-8592376)
chr3 (118-181)||(21963663-21963726)
chr3 (118-181)||(21986099-21986162)
chr3 (133-249)||(39428059-39428183)
chr3 (116-178)||(18014226-18014288)
chr3 (66-116)||(24649524-24649574)
chr3 (189-242)||(3041374-3041426)
chr3 (188-241)||(8560382-8560433)
chr3 (112-149)||(13006089-13006126)
chr3 (188-241)||(19348705-19348757)
chr3 (188-241)||(22970961-22971013)
chr3 (113-178)||(27090677-27090742)
chr3 (185-245)||(22355971-22356030)
[»] scaffold0603 (1 HSPs)
scaffold0603 (112-249)||(8787-8932)
[»] scaffold0534 (1 HSPs)
scaffold0534 (66-167)||(916-1024)
[»] scaffold0028 (1 HSPs)
scaffold0028 (112-175)||(145826-145889)
[»] scaffold0042 (1 HSPs)
scaffold0042 (113-175)||(93534-93596)
[»] scaffold0510 (1 HSPs)
scaffold0510 (114-181)||(34-100)
[»] scaffold0417 (1 HSPs)
scaffold0417 (118-181)||(7289-7352)
[»] scaffold0150 (1 HSPs)
scaffold0150 (112-175)||(33176-33239)
[»] scaffold0259 (1 HSPs)
scaffold0259 (188-250)||(18539-18601)
[»] scaffold0079 (1 HSPs)
scaffold0079 (116-178)||(14758-14820)
[»] scaffold0027 (1 HSPs)
scaffold0027 (116-178)||(132947-133009)
[»] scaffold1178 (1 HSPs)
scaffold1178 (188-241)||(487-539)
[»] scaffold0001 (1 HSPs)
scaffold0001 (113-178)||(142864-142929)
[»] scaffold0684 (1 HSPs)
scaffold0684 (188-241)||(5137-5189)
[»] scaffold2084 (1 HSPs)
scaffold2084 (66-118)||(130-182)
[»] scaffold0017 (1 HSPs)
scaffold0017 (66-118)||(38302-38354)


Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 250
Target Start/End: Original strand, 21157422 - 21157657
Alignment:
Q  13 aatatgtagataatatgatgagccatgctttacatgatgataatagtccaacaaaggttgttaaaatcgggattttacttcagatcaaaagggaatagca 112  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||    
T  21157422 aatatgtagataatatgatgagccatgctttacacgatgataatagtctaacaaaggttgttaaaattggaattttacttcagatcaaaagggaatagca 21157521  T
Q  113 aaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaacaaaatcgatggattctaccaaaac 212  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||| ||||||||||| |||||||||||||||||    
T  21157522 aaatcgtaaaatctcaatcaaaattgaaggattttattcaactacttttgtagaatctatatagg--atggtaaacaaaatcaatggattctaccaaaac 21157619  T
Q  213 aaaagtaatgctaaatgtatgttataaatggtatataa 250  Q
    |||||||||||||||| |||||||||||||||||||||    
T  21157620 aaaagtaatgctaaatatatgttataaatggtatataa 21157657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 62 - 211
Target Start/End: Original strand, 22687038 - 22687194
Alignment:
Q  62 aacaaaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatc-------gtaaaatctcaatcaaaattgaaggattttactcaac 154  Q
    ||||||||||||||||||||||||||| ||||||||| |||| ||| |||||||||       |||||||| ||| ||||||||||| ||||||||||||    
T  22687038 aacaaaggttgttaaaatcgggattttgcttcagatcgaaagagaagagcaaaatcgagaatcgtaaaatcacaaccaaaattgaagaattttactcaac 22687137  T
Q  155 tacttttgtagaatctatataggaaatgataaacaaaatcgatggattctaccaaaa 211  Q
    ||||||||||||||| ||||| |||||   || |||||| |||||||| || |||||    
T  22687138 tacttttgtagaatcgatataagaaatcgcaatcaaaattgatggattttatcaaaa 22687194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 250
Target Start/End: Complemental strand, 17811702 - 17811503
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaa-------tcgtaaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| |||||||||| |||||||||| |||||||||||||||||||       |||||||||| |||||||||| ||| ||||||||||||  |||    
T  17811702 aaggttgtcaaaatcgggactttacttcaggtcaaaagggaatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaagattttactcaaggact 17811603  T
Q  159 tttgtagaatctatataggaaatgataaa--------caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatataa 250  Q
    ||||||||||| |||||| ||||  ||||        ||||||||||||||| |||| ||| || | ||||  ||||| ||| |||||||||||||||||    
T  17811602 tttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaatcgatggattttacccaaaaaatattaatattaaatatattttataaatggtatataa 17811503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 249
Target Start/End: Original strand, 20570720 - 20570857
Alignment:
Q  119 taaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattctaccaaa 210  Q
    ||||||| |||||||||||||| ||||||||||||  |||||||||||||| ||||| ||||| |||||        ||||||||||||| | |||||||    
T  20570720 taaaatcgcaatcaaaattgaaagattttactcaaggacttttgtagaatcgatataagaaattataaaatcacaatcaaaatcgatggactttaccaaa 20570819  T
Q  211 acaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    | || | |||| |||||| ||||||||||||||||||||    
T  20570820 a-aagaataatactaaatatatgttataaatggtatata 20570857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 249
Target Start/End: Complemental strand, 5058887 - 5058686
Alignment:
Q  61 caacaaaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaa-------tcgtaaaatctcaatcaaaattgaaggattttactcaa 153  Q
    |||| |||||||| |||||||||| ||||||||||||||||||||||||||||||       |||||||||  |||||||||| ||||||||||| ||||    
T  5058887 caactaaggttgtcaaaatcgggactttacttcagatcaaaagggaatagcaaaatcggaattcgtaaaattgcaatcaaaatcgaaggattttaatcaa 5058788  T
Q  154 ctacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggta 245  Q
      | |||||| ||||| |||||  ||||  ||||        ||||||||||||| | |||||||| || | |||| |||||| ||||||||||||||||    
T  5058787 ggaattttgt-gaatcgatataaaaaattgtaaaatcgcaatcaaaatcgatggactttaccaaaa-aataataatactaaatatatgttataaatggta 5058690  T
Q  246 tata 249  Q
    ||||    
T  5058689 tata 5058686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 249
Target Start/End: Original strand, 26565376 - 26565520
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattc 203  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||| |||||  ||||  ||||        |||||| ||||||||     
T  26565376 aaaatcgtaaaatcgtaatcaaaatcgaaggattttactcaactacttttgtagaatcaatataaaaaatcgtaaaattgcaatcaaaattgatggattt 26565475  T
Q  204 taccaaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    ||||||||||||| ||||| | ||| |||||||||||  |||||||    
T  26565476 taccaaaacaaaaataatg-ttaatatatgttataaactgtatata 26565520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 181
Target Start/End: Complemental strand, 39182455 - 39182388
Alignment:
Q  114 aatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    |||||||||||| ||| |||||| |||||||||||||||||||||||||||||||| ||||| |||||    
T  39182455 aatcgtaaaatcgcaaccaaaatcgaaggattttactcaactacttttgtagaatcgatataagaaat 39182388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 250
Target Start/End: Complemental strand, 5715582 - 5715445
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattctacc 207  Q
    |||||||||| |||||||||| || |||||||||||||  |||||||||||||| ||||||||||| |||||        ||||||||||| ||| ||||    
T  5715582 tcgtaaaatcgcaatcaaaatcgagggattttactcaaggacttttgtagaatcgatataggaaattataaaatcgcaatcaaaatcgatgaattttacc 5715483  T
Q  208 aaaacaaaagtaatgctaaatgtatgttataaatggtatataa 250  Q
    |||| ||||  ||||   ||| |||||||||||||||||||||    
T  5715482 aaaaaaaaa--aatg---aatatatgttataaatggtatataa 5715445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 8329873 - 8329941
Alignment:
Q  113 aaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||  ||||| |||||    
T  8329873 aaatcgtaaaatcgcaatcaaaatcaaaggattttactcaactacttttgtagaattgatataagaaat 8329941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 181
Target Start/End: Original strand, 8329809 - 8329876
Alignment:
Q  114 aatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    |||| ||||||  ||||||||||||||||||||||||||||||||||||||||||  ||||| |||||    
T  8329809 aatcataaaattgcaatcaaaattgaaggattttactcaactacttttgtagaattgatataagaaat 8329876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 4575031 - 4574965
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatatagga 178  Q
    |||||||||||||| ||||||||||  ||| ||| ||||||||||||||||||||||| ||||||||    
T  4575031 aaaatcgtaaaatcgcaatcaaaatcaaagaattctactcaactacttttgtagaatcgatatagga 4574965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 113 - 187
Target Start/End: Original strand, 8346360 - 8346434
Alignment:
Q  113 aaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa 187  Q
    ||||||||| ||| ||||||||||  ||||||||||||||||||||||||||||||  ||||| ||||| |||||    
T  8346360 aaatcgtaatatcgcaatcaaaatcaaaggattttactcaactacttttgtagaattgatataagaaatcataaa 8346434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 187
Target Start/End: Original strand, 24989549 - 24989676
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| |||||||||| ||||||| || || |||||||||| ||||||||       ||||||  |||||||||| ||||||||||||| ||  |||    
T  24989549 aaggttgtcaaaatcgggactttactttaggtcgaaagggaataacaaaatcgggactcgtaaaatggcaatcaaaatcgaaggattttact-aaggact 24989647  T
Q  159 tttgtagaatctatataggaaatgataaa 187  Q
    ||||||||||| ||||||||||| |||||    
T  24989648 tttgtagaatcgatataggaaattataaa 24989676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 112 - 247
Target Start/End: Complemental strand, 30294546 - 30294404
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattc 203  Q
    ||||||||||| || |||||||||| ||||||||||||| |||||||||| ||||||| ||| | |||||  ||||        |||| ||||||||||     
T  30294546 aaaatcgtaaa-tcacaatcaaaatcgaaggattttacttaactacttttatagaatcgataaaagaaatcctaaaatcacaatcaaactcgatggattt 30294448  T
Q  204 taccaaaacaaaagtaatgctaaatgtatgttataaatggtata 247  Q
    ||||||||||||  ||||| ||||| |||||||||||| |||||    
T  30294447 taccaaaacaaagataatgttaaatatatgttataaattgtata 30294404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 17741945 - 17741888
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatc 169  Q
    |||||||||||||  |||||||||||||||||||||||| |||||||||| |||||||    
T  17741945 aaaatcgtaaaattgcaatcaaaattgaaggattttacttaactacttttttagaatc 17741888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 249
Target Start/End: Original strand, 24725307 - 24725449
Alignment:
Q  119 taaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattctacc--- 207  Q
    ||||||| ||||||||||  |||||||||||||||  |||||||||||||| |||||||||||  ||||        ||||||||||||||| ||||       
T  24725307 taaaatcgcaatcaaaatcaaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccaa 24725406  T
Q  208 -aaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
     ||||  ||| |||| |||||| ||||||||||||||||||||    
T  24725407 aaaaaataaaataatactaaatatatgttataaatggtatata 24725449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 118 - 181
Target Start/End: Complemental strand, 14055552 - 14055489
Alignment:
Q  118 gtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    |||||||| ||| |||||| |||||||||||||||||||||||||||||| | ||||| |||||    
T  14055552 gtaaaatcgcaaccaaaatcgaaggattttactcaactacttttgtagaaacgatataagaaat 14055489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 118 - 181
Target Start/End: Complemental strand, 14365580 - 14365517
Alignment:
Q  118 gtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    |||||||| ||| |||||| |||||||||||||||||||||||||||||| | ||||| |||||    
T  14365580 gtaaaatcgcaaccaaaatcgaaggattttactcaactacttttgtagaaacgatataagaaat 14365517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 249
Target Start/End: Original strand, 44944620 - 44944817
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaa-------aatcgtaaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| |||||||||| ||||||||||||| ||||| ||||||||       | |||||||||| |||| ||||| |||  |||||||| ||  |||    
T  44944620 aaggttgtcaaaatcgggactttacttcagatcgaaaggaaatagcaaatgcgggactcgtaaaatcgcaattaaaatcgaacaattttacttaaggact 44944719  T
Q  159 tttgtagaatctatataggaaatgataaa--------caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    ||||||||||| ||||| |||||  ||||        |||||||||| || | |||||||| || | |||| |||||| ||||||||||||||||||||    
T  44944720 tttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatagactttaccaaaa-aataataatactaaatatatgttataaatggtatata 44944817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 8304383 - 8304321
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatatagga 178  Q
    |||||||||| |||||||||| ||||||||||||||||  |||||||||||||  ||||||||    
T  8304383 tcgtaaaatcacaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatagga 8304321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 11326577 - 11326515
Alignment:
Q  119 taaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    ||||||| ||||||||||||||| |||||||||||  |||||||| ||||| |||||||||||    
T  11326577 taaaatcacaatcaaaattgaagtattttactcaaggacttttgtggaatcaatataggaaat 11326515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 21846275 - 21846344
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    |||||| ||||||| ||| |||||| ||||||||||| |||||||||||| ||||||| ||||| |||||    
T  21846275 aaaatcctaaaatcgcaaccaaaatcgaaggattttaatcaactacttttatagaatcgatataagaaat 21846344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 27509260 - 27509309
Alignment:
Q  132 aaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    |||||||||||||||||||||||||||||| ||||||| ||||| |||||    
T  27509260 aaaattgaaggattttactcaactacttttatagaatcgatataagaaat 27509309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 249
Target Start/End: Complemental strand, 4247653 - 4247513
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattctacc 207  Q
    |||||||||| |||||||| |  |||||||||||||||  | |||||||||||| ||||| ||||| |||||        ||||||||||||||| ||||    
T  4247653 tcgtaaaatcgcaatcaaattcaaaggattttactcaaggatttttgtagaatcgatataagaaatcataaaatcgcaatcaaaatcgatggattttacc 4247554  T
Q  208 aaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
     ||| |||| |||| |||||| ||||||| ||||| ||||||    
T  4247553 taaa-aaaaataatactaaatatatgttacaaatgatatata 4247513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 181
Target Start/End: Complemental strand, 1977847 - 1977781
Alignment:
Q  114 aatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    |||||||||||| |||||||||| |||||||||||||||| || |||| ||||||| ||||| |||||    
T  1977847 aatcgtaaaatcgcaatcaaaatcgaaggattttactcaatta-ttttttagaatcgatataagaaat 1977781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 241
Target Start/End: Original strand, 8629662 - 8629705
Alignment:
Q  198 ggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||    
T  8629662 ggattctaccaaaacaaaaataatgctaaatatatgttataaat 8629705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 17809050 - 17809101
Alignment:
Q  199 gattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatataa 250  Q
    |||||||||||||||||| ||||||||||| |||||||||||| | ||||||    
T  17809050 gattctaccaaaacaaaaataatgctaaatatatgttataaattgcatataa 17809101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 8343632 - 8343686
Alignment:
Q  114 aatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaat 168  Q
    ||||||||||   |||||||||| |||| ||||||||||||||||||||||||||    
T  8343632 aatcgtaaaaatgcaatcaaaatcgaagtattttactcaactacttttgtagaat 8343686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 25842563 - 25842625
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatatagga 178  Q
    |||||||||| |||||||||||| |||||||||||||   |||||||||||||| || |||||    
T  25842563 tcgtaaaatcgcaatcaaaattggaggattttactcatgaacttttgtagaatcgatgtagga 25842625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 26281165 - 26281251
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaa-----atcgtaaaatctcaatcaaaattgaaggatttt 147  Q
    |||||||| |||||| ||| ||||||| || || ||| |||||||||||     ||||||||||| |||||||||||||||||||||    
T  26281165 aaggttgtcaaaatcaggactttactttaggtcgaaaaggaatagcaaatcaggatcgtaaaatcgcaatcaaaattgaaggatttt 26281251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 1981248 - 1981300
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||| |||||||| |||||||||| ||||||||||| ||||||||||||    
T  1981248 caaaatcga-ggattctatcaaaacaaaaataatgctaaatatatgttataaat 1981300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 6917064 - 6917031
Alignment:
Q  127 caatcaaaattgaaggattttactcaactacttt 160  Q
    ||||||||||||||||||||||||||||||||||    
T  6917064 caatcaaaattgaaggattttactcaactacttt 6917031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 8254031 - 8254083
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||| ||||||||||||||||||| ||||| ||||| ||||||||||||    
T  8254031 caaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgttataaat 8254083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 25842656 - 25842708
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||| ||||||||||||||||||| ||||| ||||| ||||||||||||    
T  25842656 caaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgttataaat 25842708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 27221711 - 27221646
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    |||||||||| |||||||||| ||||||||||||||    |||||||||||||| || ||||||||    
T  27221711 tcgtaaaatcgcaatcaaaatcgaaggattttactcggagacttttgtagaatcgatgtaggaaat 27221646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 48621483 - 48621532
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttactcaactactttt 161  Q
    |||||||||||||| ||||  |||||||| ||||||||||||||||||||    
T  48621483 aaaatcgtaaaatcgcaattgaaattgaaagattttactcaactactttt 48621532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 181
Target Start/End: Original strand, 7730189 - 7730256
Alignment:
Q  114 aatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    |||||||||||| ||| |||||| ||| | ||||||||||||||||||||| |||  ||||| |||||    
T  7730189 aatcgtaaaatcgcaaccaaaatcgaatggttttactcaactacttttgtataattgatataagaaat 7730256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 8346313 - 8346363
Alignment:
Q  131 caaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    |||||| |||||||||||||||||||||||| ||||||  ||||| |||||    
T  8346313 caaaatcgaaggattttactcaactacttttatagaattgatataagaaat 8346363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 4574934 - 4574881
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    |||||||||| |||| |||||||| |||| ||||||| ||| ||||||||||||    
T  4574934 caaaatcgatagattttaccaaaataaaaataatgcttaatatatgttataaat 4574881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 23618265 - 23618314
Alignment:
Q  120 aaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatc 169  Q
    |||||| |||||||||| |||| |||||||||||  ||||||||||||||    
T  23618265 aaaatcgcaatcaaaatcgaagaattttactcaaggacttttgtagaatc 23618314  T

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Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 23618354 - 23618406
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||| ||||||||||||||||||| ||||| ||||| ||| ||||||||    
T  23618354 caaaatcga-ggattctaccaaaacaaaaataatgttaaatatatattataaat 23618406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 21846341 - 21846377
Alignment:
Q  113 aaatcgtaaaatctcaatcaaaattgaaggattttac 149  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  21846341 aaatcgtaaaatcacaatcaaaattgatggattttac 21846377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 1e-31; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 66 - 247
Target Start/End: Original strand, 43005634 - 43005830
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| |||||||||||||| ||| ||||| ||||| ||||| ||| |||       ||||||| |||||||||||||| |||||||||||||| ||    
T  43005634 aaggttgtcaaaatcgggattttgctttagatcgaaaggaaatagaaaattcgaaaattgtaaaatcgcaatcaaaattgaaagattttactcaacttct 43005733  T
Q  159 tttgtagaatctatataggaaatgataaa--------caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtata 247  Q
    ||||||||||| |||||||||||  ||||         |||||||||||||| ||||||||||||| ||||||||||| |||||||||||| |||||    
T  43005734 tttgtagaatcgatataggaaatcgtaaaatcgcaattaaaatcgatggattgtaccaaaacaaaaataatgctaaatatatgttataaattgtata 43005830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 66 - 249
Target Start/End: Complemental strand, 26021665 - 26021477
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtag 165  Q
    |||||||| |||||||||||||| ||||||  |||||||||| |||||||||| |||||| |||||||||| | |||||||||||||||||||| ||||     
T  26021665 aaggttgtcaaaatcgggattttgcttcaggccaaaagggaagagcaaaatcg-aaaatcacaatcaaaatcgtaggattttactcaactacttgtgtaa 26021567  T
Q  166 aatctatataggaaatgataa----acaa--aatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
     ||| ||||| |||||  |||    ||||  || ||||| ||| ||||||||||| | ||||||||||| |||||||||||| |||||||    
T  26021566 catcgatataagaaatcgtaaaatcacaattaaacgatgcattttaccaaaacaataataatgctaaatatatgttataaattgtatata 26021477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 112 - 249
Target Start/End: Complemental strand, 24648310 - 24648173
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaacaaaatcgatggattctaccaaaa 211  Q
    ||||||||||||||  |||||||||  ||||||||||||||||||||||||||||||| |||||  ||||   || |||||||| |||||| ||| ||||    
T  24648310 aaaatcgtaaaatcgtaatcaaaatcaaaggattttactcaactacttttgtagaatcaatataaaaaatcgcaatcaaaatcggtggattttactaaaa 24648211  T
Q  212 caaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    || || ||||||||||| ||| |||||||| |||||||    
T  24648210 cataaataatgctaaatatatattataaattgtatata 24648173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 67 - 250
Target Start/End: Complemental strand, 18844068 - 18843871
Alignment:
Q  67 aggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactactt 159  Q
    ||||||| |||||||| | |||||||||| || |||||||||||||||||||       ||||||| |||||||||| | || |||||||||||  ||||    
T  18844068 aggttgtcaaaatcggaactttacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcggagtattttactcaaggactt 18843969  T
Q  160 ttgtagaatctatataggaaatgataaa--------caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatataa 250  Q
    |||||||||| |||||||||||  ||||        ||||||||||||||| |||| ||| |||| |||| |||||| |||||||||||||||||||||    
T  18843968 ttgtagaatccatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccaaa-aaaattaatactaaatatatgttataaatggtatataa 18843871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 66 - 248
Target Start/End: Complemental strand, 20321297 - 20321100
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| ||||| |||| |||||||||| |||||| ||||||| |||||||       ||||||| |||||||||||||||||||||||| ||  |||    
T  20321297 aaggttgtcaaaattgggactttacttcaggtcaaaaaggaatagtaaaatcgggactcataaaatcgcaatcaaaattgaaggattttactgaaggact 20321198  T
Q  159 tttgtagaatctatataggaaatgataaa--------caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatat 248  Q
    |||||||||||||||||||||||  ||||        ||||||||||||||| |||| | | |||| ||||  ||||| ||||||||||||| |||||    
T  20321197 tttgtagaatctatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccagaaaaaattaatattaaatatatgttataaatgatatat 20321100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 17624917 - 17624837
Alignment:
Q  97 tcaaaagggaatagcaaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatatagg 177  Q
    ||||||| ||||||||||||||||||||| ||||||||||  || ||||||||||||||||||||||  |||| |||||||    
T  17624917 tcaaaagagaatagcaaaatcgtaaaatcgcaatcaaaatcaaaagattttactcaactacttttgttaaatcaatatagg 17624837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 249
Target Start/End: Original strand, 41688440 - 41688637
Alignment:
Q  65 aaaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactac 157  Q
    ||||||||| |||||||||| ||||||| ||  | |||||||||||||||||||       ||||||| ||| |||||| ||||||||||||| ||  ||    
T  41688440 aaaggttgtcaaaatcgggactttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaaccaaaatcgaaggattttacttaaggac 41688539  T
Q  158 ttttgtagaatctatataggaaatgataaa--------caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    |||||||||||| |||||| ||||  ||||        ||||||||||| ||| |||||||  |||| |||| |||||| |||||||| |||||||||||    
T  41688540 ttttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaatcgatgaattttaccaaa--aaaaataatactaaatatatgttatgaatggtatata 41688637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 13341472 - 13341591
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaat--------cgtaaaatctcaatcaaaattgaaggattttactcaactac 157  Q
    |||||||| |||||||||||||| ||||| ||| ||||||||||| |||||        ||||||||| ||| | |||||||||||||| |||| |||||    
T  13341472 aaggttgtcaaaatcgggattttgcttcaaatcgaaagggaatagaaaaattgaaaaatcgtaaaatcgcaaacgaaattgaaggattt-actcgactac 13341570  T
Q  158 ttttgtagaatctatatagga 178  Q
    |||||||||||| ||||||||    
T  13341571 ttttgtagaatcgatatagga 13341591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 245
Target Start/End: Complemental strand, 19579298 - 19579103
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaata-gcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactac 157  Q
    ||||| || ||||||||||||||||||||| || ||||||| || ||||||| |       ||||||| |||||||||| ||||||||| ||||||  ||    
T  19579298 aaggtagtcaaaatcgggattttacttcaggtcgaaagggagtaagcaaaattgggactcataaaatcgcaatcaaaatcgaaggatttcactcaaggac 19579199  T
Q  158 ttttgtagaatctatataggaaatgataaa--------caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggta 245  Q
    ||||||||||||  ||||| ||||  ||||        ||||||||||||||| |||||||| |||| |||| | |||| |||||||| |||||||    
T  19579198 ttttgtagaatcgttatagaaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaaaaaaaataataccaaatatatgttatgaatggta 19579103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 41427716 - 41427654
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatatagga 178  Q
    |||||||||| |||||||||| |||||||||||||| |  |||||||||||||| ||||||||    
T  41427716 tcgtaaaatcgcaatcaaaatcgaaggattttactcgaggacttttgtagaatcgatatagga 41427654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 9996895 - 9996948
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||||||||| ||||||||||||| ||||||| ||| ||||||||||||    
T  9996895 caaaatcgatggattttaccaaaacaaaaataatgcttaatatatgttataaat 9996948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 15051929 - 15051981
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaat 168  Q
    |||||||||| |||||||||| ||||||||||||||||  |||||||||||||    
T  15051929 tcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaat 15051981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 249
Target Start/End: Original strand, 21058986 - 21059128
Alignment:
Q  114 aatcgtaaaatctcaatcaaaattgaaggatttt-actcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattct 204  Q
    |||||||||||| ||| |||||| ||| |||||| ||| ||||||||||||||||| |||||| ||||| |||||        ||||||||||||||| |    
T  21058986 aatcgtaaaatcgcaaccaaaatcgaaagatttttacttaactacttttgtagaatttatataagaaattataaaatcgcaatcaaaatcgatggatttt 21059085  T
Q  205 accaaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    || | || ||||  ||| |||||| ||||||||||||||| ||||    
T  21059086 acaacaaaaaaa--aatactaaatatatgttataaatggtttata 21059128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 38158101 - 38158161
Alignment:
Q  121 aaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    ||||| ||| |||||| ||||||||||||||||||| ||||||||||||||| || |||||    
T  38158101 aaatcgcaaccaaaatcgaaggattttactcaactatttttgtagaatctatgtaagaaat 38158161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 43235162 - 43235106
Alignment:
Q  119 taaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatata 175  Q
    ||||||| |||||||||| ||||||||||||||||  |||||||||||||| |||||    
T  43235162 taaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatata 43235106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 181
Target Start/End: Original strand, 23172219 - 23172325
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtag 165  Q
    |||||||| |||||||| | |||||||||| |  ||||||||||||||| ||||||        ||||||| |||| |||||||||||  ||||||||||    
T  23172219 aaggttgtcaaaatcggaactttacttcaggttgaaagggaatagcaaa-tcgtaa--------tcaaaatcgaagaattttactcaaagacttttgtag 23172309  T
Q  166 aatctatataggaaat 181  Q
    |||| |||||||||||    
T  23172310 aatcgatataggaaat 23172325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 15052016 - 15052068
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||| ||||||||||||||||||| ||||| ||||| ||||||||||||    
T  15052016 caaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgttataaat 15052068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 19042260 - 19042325
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    |||||||||| |||| ||||| |||| |||||||| ||  |||||||||||||| |||||||||||    
T  19042260 tcgtaaaatcacaattaaaatcgaagaattttacttaaggacttttgtagaatcgatataggaaat 19042325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 175
Target Start/End: Complemental strand, 19377902 - 19377841
Alignment:
Q  114 aatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatata 175  Q
    ||||||||| |  |||||||||| ||||||||||||||||  |||||||||||||| |||||    
T  19377902 aatcgtaaatttacaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatata 19377841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 27340015 - 27340084
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    |||||||| ||||| |||||||||| |||||||||||||||   |||||||||||||  ||||| |||||    
T  27340015 aaaatcgtgaaatcgcaatcaaaatcgaaggattttactcacggacttttgtagaattgatataagaaat 27340084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 6852341 - 6852393
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg 118  Q
    |||||||| |||||||||| || ||||||| || |||||||||||||||||||    
T  6852341 aaggttgtcaaaatcgggacttcacttcaggtcgaaagggaatagcaaaatcg 6852393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 181
Target Start/End: Original strand, 18051308 - 18051430
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatc-------gtaaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    ||||| || |||||||||||||||||| || || ||||||||||| ||||||       ||| |||| ||||||||||  ||| |||||| | ||  |||    
T  18051308 aaggtagtcaaaatcgggattttactttaggtcgaaagggaatagaaaaatcgggacttgtagaatcgcaatcaaaatcaaagaattttattgaaggact 18051407  T
Q  159 tttgtagaatctatataggaaat 181  Q
    ||||||||||| |||||||||||    
T  18051408 tttgtagaatcgatataggaaat 18051430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 22984644 - 22984695
Alignment:
Q  127 caatcaaaattgaaggattttactcaactacttttgtagaatctatatagga 178  Q
    |||||||||| ||||||||||||||||  | |||||||||||| ||||||||    
T  22984644 caatcaaaatcgaaggattttactcaaggaattttgtagaatcgatatagga 22984695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 30799682 - 30799635
Alignment:
Q  128 aatcaaaattgaaggattttactcaactacttttgtagaatctatata 175  Q
    |||| |||| |||||||||||| ||||||||||||||||||| |||||    
T  30799682 aatcgaaatcgaaggattttacacaactacttttgtagaatcgatata 30799635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 15446416 - 15446367
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttat 237  Q
    |||||||||||||||||| |||||||||| ||| | ||||| ||||||||    
T  15446416 caaaatcgatggattctatcaaaacaaaaataacgataaatatatgttat 15446367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 29270374 - 29270325
Alignment:
Q  69 gttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg 118  Q
    ||||| ||||||||||||||| ||||| ||||||| ||||| ||||||||    
T  29270374 gttgtcaaaatcgggattttatttcaggtcaaaagagaatatcaaaatcg 29270325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 41427623 - 41427571
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||| ||||||||||||||||||| ||||| ||||| ||| ||||||||    
T  41427623 caaaatcga-ggattctaccaaaacaaaaataatgataaatatatattataaat 41427571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 241
Target Start/End: Original strand, 187809 - 187849
Alignment:
Q  201 ttctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    |||||||||||||||| ||||| ||||| ||||||||||||    
T  187809 ttctaccaaaacaaaaataatgttaaatatatgttataaat 187849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 15446506 - 15446450
Alignment:
Q  119 taaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatata 175  Q
    ||||||| ||||| |||  ||||||||||| || ||||||||||||||||| |||||    
T  15446506 taaaatcacaatcgaaaccgaaggattttagtcgactacttttgtagaatcgatata 15446450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 19979922 - 19979870
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg 118  Q
    ||||| || |||||||||||||| |||||| ||||||| ||| ||||||||||    
T  19979922 aaggtggtcaaaatcgggattttgcttcaggtcaaaagagaagagcaaaatcg 19979870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 30804205 - 30804169
Alignment:
Q  142 gattttactcaactacttttgtagaatctatatagga 178  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  30804205 gattttactaaactacttttgtagaatcgatatagga 30804169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 112 - 249
Target Start/End: Original strand, 6346783 - 6346928
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattc 203  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||  ||||| |||||  ||||        |||||||||||||||     
T  6346783 aaaatcgtaaaatcacaatcaaaatcgaaggattttactcaactacttttgtagaatgaatataagaaattgtaaaatcgcaatcaaaatcgatggattt 6346882  T
Q  204 taccaaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
     |||||||||||| ||||| ||||| |||||||||||| |||||||    
T  6346883 caccaaaacaaaaataatgataaatatatgttataaattgtatata 6346928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 66 - 249
Target Start/End: Complemental strand, 24719922 - 24719731
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtag 165  Q
    |||||||| ||||||| |||||| |||||| || |||||||| |||||||||| ||||||  ||||| ||| |||||||||||||| | |||||||||||    
T  24719922 aaggttgtcaaaatcgagattttgcttcaggtcgaaagggaagagcaaaatcgaaaaatcgaaatcacaatcgaaggattttactcgattacttttgtag 24719823  T
Q  166 aatctatataggaaatgataaa--------caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    |||| ||||| |||||  ||||        |||||||||||  || ||||||| ||||| ||||| ||||| |||||||||||| |||||||    
T  24719822 aatcgatataagaaatcgtaaaatcgcaatcaaaatcgatgagttttaccaaagcaaaaataatgttaaatatatgttataaattgtatata 24719731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 116 - 250
Target Start/End: Original strand, 8010968 - 8011110
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattctacc 207  Q
    |||||||||| |||||||||| ||||||||||||||||||| |||| ||||||| ||||| |||||  ||||        ||||||||||| ||| ||||    
T  8010968 tcgtaaaatcgcaatcaaaatcgaaggattttactcaactatttttatagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatgtattttacc 8011067  T
Q  208 aaaacaaaagtaatgctaaatgtatgttataaatggtatataa 250  Q
    ||||||||| ||||||||||| |||||||||||| ||||||||    
T  8011068 aaaacaaaaataatgctaaatatatgttataaattgtatataa 8011110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 112 - 248
Target Start/End: Complemental strand, 10394911 - 10394768
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataa----aca---aaatcgatggattct 204  Q
    |||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||  ||||||||||  |||    |||   ||||||||||||  |    
T  10394911 aaaatcgtaaaatcgcaatcaaaatcgaaggactttactcaactacttttgtagaatcggtataggaaatcgtaaaattacaatcaaatcgatggatatt 10394812  T
Q  205 accaaaacaaaagtaatgctaaatgtatgttataaatggtatat 248  Q
    |||||||||||| ||||| ||||| |||||||||||| ||||||    
T  10394811 accaaaacaaaaataatggtaaatatatgttataaattgtatat 10394768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 116 - 248
Target Start/End: Complemental strand, 5375962 - 5375822
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattctacc 207  Q
    |||||||||| |||||||||| ||||||||||||||||  |||| |||||||||||||||||||||  ||||        ||||||||||||||| ||||    
T  5375962 tcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttctgtagaatctatataggaaattgtaaaatcacaatcaaaatcgatggattttacc 5375863  T
Q  208 aaaacaaaagtaatgctaaatgtatgttataaatggtatat 248  Q
     ||| |||| |||| |||||| ||||||||||||| |||||    
T  5375862 caaaaaaaattaatactaaatatatgttataaatgatatat 5375822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 112 - 249
Target Start/End: Original strand, 9149550 - 9149696
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa---------caaaatcgatggatt 202  Q
    ||||| |||||||  |||||||||||||||||||||||||||||||||| |||||||| ||||| |||||  ||||         |||||| ||| ||||    
T  9149550 aaaattgtaaaattccaatcaaaattgaaggattttactcaactactttcgtagaatcgatataagaaatcgtaaaaaacgcaatcaaaattgatagatt 9149649  T
Q  203 ctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
     |||||||| |||| ||||||||||| |||||||||||| |||||||    
T  9149650 ttaccaaaagaaaaataatgctaaatatatgttataaattgtatata 9149696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 249
Target Start/End: Complemental strand, 9770466 - 9770269
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| |||||||||| ||||||| || || |||||||||||||||||||       ||||||| |||||||||| ||||||||||||||||   ||    
T  9770466 aaggttgtcaaaatcgggactttactttaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggtct 9770367  T
Q  159 tttgtagaatctatataggaaatgataaa--------caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    ||||||||||| |||||| ||||  ||||        ||||||||||| ||| |||| ||| |||| |||| |||||| |||||||| |||||||||||    
T  9770366 tttgtagaatcgatatagcaaattgtaaaatcgcaatcaaaatcgatgaattttacccaaa-aaaattaatactaaatatatgttatgaatggtatata 9770269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 67 - 181
Target Start/End: Original strand, 23064737 - 23064858
Alignment:
Q  67 aggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactactt 159  Q
    ||||||| |||||||||| |||||||||| || |||||||||| | ||||||       ||||||| |||||||||||||||||||||| ||||  ||||    
T  23064737 aggttgtcaaaatcgggactttacttcaggtcgaaagggaataacgaaatcggaactcgtaaaatcgcaatcaaaattgaaggattttattcaaggactt 23064836  T
Q  160 ttgtagaatctatataggaaat 181  Q
    |||||||||| |||||||||||    
T  23064837 ttgtagaatcgatataggaaat 23064858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 112 - 241
Target Start/End: Original strand, 5943087 - 5943213
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaacaaaatcgatggattctaccaaaa 211  Q
    |||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||  | || |||||  |    |||||||||||||| ||||||||    
T  5943087 aaaatcgtaaaatcgcaagtaaaattgaaggattttactcaactacttttgtagaatcggtttaagaaatcgt----aaaatcgatggattttaccaaaa 5943182  T
Q  212 caaaagtaatgctaaatgt-atgttataaat 241  Q
     |||| ||||| ||||| | |||||||||||    
T  5943183 taaaaataatgttaaatataatgttataaat 5943213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 114 - 175
Target Start/End: Complemental strand, 37240538 - 37240477
Alignment:
Q  114 aatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatata 175  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||    
T  37240538 aatcgtaaaatcgcaatcaaaatcgaaggattttactcaactacttttgtagaatcgatata 37240477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 5884054 - 5884118
Alignment:
Q  83 gattttacttcagatcaaaagggaatagcaaaatcgtaaaatctcaatcaaaattgaaggatttt 147  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||    
T  5884054 gattttgcttcagatcaaaagggaatagcaaaatcgtaaaatcgcaatcgaaatcgaaggatttt 5884118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 241
Target Start/End: Complemental strand, 7452806 - 7452670
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattc 203  Q
    |||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||  ||||         ||||||||||||||     
T  7452806 aaaatcgtaaaatcgcaatcaaaatcgaaggattt-actcaactacttttgtagaatcaatatacgaaatcgtaaaagcacaactaaaatcgatggattt 7452708  T
Q  204 taccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    |  |||||||||| ||||||| ||| ||||||||||||    
T  7452707 tgtcaaaacaaaaataatgcttaatatatgttataaat 7452670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 249
Target Start/End: Complemental strand, 10143199 - 10143056
Alignment:
Q  114 aatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattcta 205  Q
    |||||||||||| |||||||||| ||||||||||| ||||||| |||||||||||| ||||| || ||  ||||        |||||| |||||||| ||    
T  10143199 aatcgtaaaatcgcaatcaaaatcgaaggattttattcaactaattttgtagaatcgatataagagattgtaaaatcgcaatcaaaattgatggatttta 10143100  T
Q  206 ccaaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
     ||||| |||| |||| |||||| ||| |||||| |||||||||    
T  10143099 tcaaaaaaaaaataatactaaatatatattataattggtatata 10143056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 249
Target Start/End: Complemental strand, 7045057 - 7044919
Alignment:
Q  119 taaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattctaccaaa 210  Q
    ||||||| |||||||||| ||| ||||||||||||||||||||| | |||| ||||| |||||  ||||        ||||||||||||||| |||||||    
T  7045057 taaaatcgcaatcaaaatcgaatgattttactcaactacttttgaataatcgatataagaaatcgtaaaatatcaatcaaaatcgatggattttaccaaa 7044958  T
Q  211 acaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    |||||| ||||| ||||  | |||||||| | |||||||    
T  7044957 acaaaaataatgttaaacatgtgttataatttgtatata 7044919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 237
Target Start/End: Original strand, 18459461 - 18459577
Alignment:
Q  114 aatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaacaaaatcgatggattctaccaaaaca 213  Q
    |||||||||||| |||| ||||| ||||||||| ||| ||||| |||||||||||  ||||| |||||      |||||||||||| || | ||||||||    
T  18459461 aatcgtaaaatcgcaattaaaatcgaaggatttgacttaactaattttgtagaattgatataagaaat------caaaatcgatggctt-tgccaaaaca 18459553  T
Q  214 aaagtaatgctaaatgtatgttat 237  Q
    ||||||| ||||||| ||||||||    
T  18459554 aaagtaacgctaaatatatgttat 18459577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 181
Target Start/End: Original strand, 5361795 - 5361862
Alignment:
Q  114 aatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    |||||||||||  ||| |||||| ||||| |||||||||||||||||||||||||| ||||| |||||    
T  5361795 aatcgtaaaattgcaaacaaaatcgaagggttttactcaactacttttgtagaatcgatatatgaaat 5361862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 175
Target Start/End: Complemental strand, 55476285 - 55476226
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatata 175  Q
    |||||||||| |||||||||| ||||||||||||||||  |||||||||||||| |||||    
T  55476285 tcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatata 55476226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 249
Target Start/End: Complemental strand, 7045298 - 7045098
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| ||||| || |||||||||||| || |||||||| |||||||||        ||||||| |||||||||| |||||||||||||||||| ||    
T  7045298 aaggttgtcaaaataggaattttacttcaggtcgaaagggaagagcaaaatcaaaaatcataaaatcgcaatcaaaatcgaaggattttactcaactgct 7045199  T
Q  159 tttgtagaatc--tatataggaaatgataaa--------caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatat 248  Q
    |||  ||||||   ||||| |||||  ||||        ||||||| ||||||  ||||||||||||| ||||| ||||| |||||||||| | ||||||    
T  7045198 tttcaagaatcgagatataagaaatcgtaaaatatcaatcaaaatctatggatcttaccaaaacaaaaataatgttaaatatatgttataatttgtatat 7045099  T
Q  249 a 249  Q
    |    
T  7045098 a 7045098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 249
Target Start/End: Complemental strand, 17466378 - 17466236
Alignment:
Q  114 aatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattcta 205  Q
    |||||||||||  ||| |||||||||| |||| ||||||||||||||||| ||||| ||||| |||||  ||||        ||||||||||||||| ||    
T  17466378 aatcgtaaaattgcaaacaaaattgaaagattatactcaactacttttgtggaatcgatataagaaattgtaaaattgcaatcaaaatcgatggatttta 17466279  T
Q  206 ccaaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
     ||| | |||| ||||  ||||| ||||||||||||||||||||    
T  17466278 -caacaaaaaaataatattaaatatatgttataaatggtatata 17466236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 5884205 - 5884258
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    |||||| |||||||| ||| |||||||||||||||||||| |||||||||||||    
T  5884205 caaaatagatggattttacaaaaacaaaagtaatgctaaaagtatgttataaat 5884258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 8409798 - 8409746
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||    
T  8409798 caaaatcga-ggattctaccaaaacaaaaataatgctaaatatatgttataaat 8409746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 249
Target Start/End: Complemental strand, 36121120 - 36120981
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattctacc 207  Q
    ||||||||||  ||||||||| ||| ||||||||||||  |||||||||| ||| |||||||||||  ||||        ||||||||||||||| ||||    
T  36121120 tcgtaaaatcggaatcaaaatcgaaagattttactcaaggacttttgtagtatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 36121021  T
Q  208 aaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    |||  || | |||| |||||| ||| ||||||||||||||||    
T  36121020 aaa--aataataatactaaatatattttataaatggtatata 36120981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 4157322 - 4157271
Alignment:
Q  118 gtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatc 169  Q
    |||||||| ||||||| || ||| ||||||||||||||||||||||||||||    
T  4157322 gtaaaatcgcaatcaagatcgaaagattttactcaactacttttgtagaatc 4157271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 4157609 - 4157558
Alignment:
Q  118 gtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatc 169  Q
    |||||||| ||||||| || ||| ||||||||||||||||||||||||||||    
T  4157609 gtaaaatcgcaatcaagatcgaaagattttactcaactacttttgtagaatc 4157558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 125
Target Start/End: Complemental strand, 27528189 - 27528130
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcgtaaaatc 125  Q
    |||||||| ||||||| |||||||||||| ||| |||||||||| |||||||| ||||||    
T  27528189 aaggttgtcaaaatcgagattttacttcatatcgaaagggaataacaaaatcgaaaaatc 27528130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 8889512 - 8889462
Alignment:
Q  118 gtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaat 168  Q
    |||||||| ||| |||||| ||||||| |||||||||||||||||||||||    
T  8889512 gtaaaatcgcaaccaaaatcgaaggatcttactcaactacttttgtagaat 8889462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 199 - 249
Target Start/End: Complemental strand, 18403735 - 18403685
Alignment:
Q  199 gattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    |||||||||||||||||| ||||| ||||| |||||||||||| |||||||    
T  18403735 gattctaccaaaacaaaaataatgttaaatatatgttataaattgtatata 18403685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 5884129 - 5884174
Alignment:
Q  133 aaattgaaggattttactcaactacttttgtagaatctatatagga 178  Q
    |||| ||||||||||||||||||| |||||||||||| ||||||||    
T  5884129 aaatcgaaggattttactcaactatttttgtagaatcaatatagga 5884174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 55476192 - 55476140
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||| ||||||||||||||||||| |||||| |||| ||||||||||||    
T  55476192 caaaatcga-ggattctaccaaaacaaaaataatgcaaaatatatgttataaat 55476140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 249
Target Start/End: Original strand, 9911243 - 9911383
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattctacc 207  Q
    |||||||||| |||| ||||  |||||||||||||| |  |||||||||||||| ||||| |||||  ||||        ||||||||||||| | ||||    
T  9911243 tcgtaaaatcgcaataaaaaacgaaggattttactcgagaacttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggactttacc 9911342  T
Q  208 aaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    |||| || | |||| || ||| ||||||||||||||||||||    
T  9911343 aaaa-aataataatacttaatatatgttataaatggtatata 9911383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 198 - 241
Target Start/End: Original strand, 8020723 - 8020766
Alignment:
Q  198 ggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||||||||||||| ||||| ||||| ||||||||||||    
T  8020723 ggattctaccaaaacaaaaataatgttaaatatatgttataaat 8020766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 178
Target Start/End: Complemental strand, 20812829 - 20812778
Alignment:
Q  127 caatcaaaattgaaggattttactcaactacttttgtagaatctatatagga 178  Q
    |||||||| |||||||||||||||||| ||||||||||| || || ||||||    
T  20812829 caatcaaatttgaaggattttactcaattacttttgtaggatataaatagga 20812778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 21314869 - 21314947
Alignment:
Q  83 gattttacttcagatcaaaagggaatagcaaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttg 162  Q
    |||||| ||||||||  |||||| |||||||||||| |||||  ||| |||||| | ||||||||||||||||| |||||    
T  21314869 gattttgcttcagattgaaaggggatagcaaaatcgaaaaattgcaaccaaaatcg-aggattttactcaactaattttg 21314947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 8743609 - 8743658
Alignment:
Q  128 aatcaaaattgaaggattttactcaactacttttgtagaatctatatagg 177  Q
    ||||||||| ||| |||||||||||||||| |||||| |||| |||||||    
T  8743609 aatcaaaatcgaaagattttactcaactacatttgtataatcgatatagg 8743658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 5845968 - 5846004
Alignment:
Q  142 gattttactcaactacttttgtagaatctatatagga 178  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  5845968 gattttactcaactatttttgtagaatcaatatagga 5846004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 5846050 - 5846090
Alignment:
Q  208 aaaacaaaagtaatgctaaatgtatgttataaatggtatat 248  Q
    ||||||||| ||||||||||| |||||||||||| ||||||    
T  5846050 aaaacaaaaataatgctaaatatatgttataaattgtatat 5846090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 8931504 - 8931448
Alignment:
Q  131 caaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa 187  Q
    |||||| |||||||||||||||||||||||  || |||| ||||| ||||| |||||    
T  8931504 caaaatcgaaggattttactcaactactttgataaaatcaatataagaaattataaa 8931448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 66 - 249
Target Start/End: Original strand, 18304593 - 18304783
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtag 165  Q
    |||||||| |||||||||| || ||||||| || ||||| || ||||||||||||||||| || ||||||| ||||||||||||| ||  ||||||||||    
T  18304593 aaggttgtcaaaatcgggacttcacttcaggtcgaaaggaaaaagcaaaatcgtaaaatcgcattcaaaatcgaaggattttactaaaggacttttgtag 18304692  T
Q  166 aatctatataggaaatgataaa--------caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    |||| |||||||||||  ||||        ||||||||||||||| || ||||| |||| |||| |||||| || ||||| |||||||||||    
T  18304693 aatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttatcaaaa-aaaattaatactaaatatacgttatgaatggtatata 18304783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 181
Target Start/End: Original strand, 14074258 - 14074380
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| |||||| ||| |||||||||| || ||||||||||||||||| |       ||||||| |||||||||| ||||||||||||||||  |||    
T  14074258 aaggttgtcaaaatcaggactttacttcaggtcgaaagggaatagcaaaattggaactcataaaatcacaatcaaaatcgaaggattttactcaaggact 14074357  T
Q  159 tttgtagaatctatataggaaat 181  Q
    ||||||||||| |||||||||||    
T  14074358 tttgtagaatcgatataggaaat 14074380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 17055751 - 17055871
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattctacc 207  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||| | |||||  ||||        |||||| |||||||| ||||    
T  17055751 tcgtaaaatcgcaatcaaaatcgaaggattttactcaactacttttgtagaatcgatacaagaaattgtaaaattgcaatcaaaatggatggattttacc 17055850  T
Q  208 aaaacaaaagtaatgctaaat 228  Q
    ||||||||| |||||||||||    
T  17055851 aaaacaaaaataatgctaaat 17055871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 249
Target Start/End: Original strand, 9351838 - 9352035
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| ||||||  || |||||||||| || |||| ||||||||||||||       ||||||| |||||||||| | |||||||||  |||  |||    
T  9351838 aaggttgtcaaaatcaagactttacttcaggtcgaaagcgaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgtaggattttatccaaggact 9351937  T
Q  159 tttgtagaatctatataggaaatgataaa--------caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    |||||||||||||||||||||||  ||||        ||||||||||| ||| |||| ||| |||| |||| |||||| ||||||||||||||||||||    
T  9351938 tttgtagaatctatataggaaattgtaaaatcacaatcaaaatcgatgaattttacccaaa-aaaattaatactaaatatatgttataaatggtatata 9352035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 181
Target Start/End: Original strand, 21846050 - 21846171
Alignment:
Q  67 aggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactactt 159  Q
    ||||||| |||||| ||| |||||| ||| || |||||||||||||||||||       ||||||| |||||||||| ||||||||||||||||  ||||    
T  21846050 aggttgtcaaaatcaggactttactccaggtcgaaagggaatagcaaaatcgggactcttaaaatcgcaatcaaaatcgaaggattttactcaaggactt 21846149  T
Q  160 ttgtagaatctatataggaaat 181  Q
    |||||||||| ||||| |||||    
T  21846150 ttgtagaatcgatataagaaat 21846171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 249
Target Start/End: Complemental strand, 47786157 - 47786016
Alignment:
Q  114 aatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattcta 205  Q
    |||||||||||| ||| |||||| |||||||||||||||||||||||||||||||  ||||| ||||| | |||         |||||||||||||| ||    
T  47786157 aatcgtaaaatcacaaccaaaatcgaaggattttactcaactacttttgtagaattgatataagaaatcacaaaatcgaaataaaaatcgatggatttta 47786058  T
Q  206 ccaaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    ||| |  |||| |||| |||||| ||||||||||||||||||||    
T  47786057 ccaca--aaaaataatactaaatatatgttataaatggtatata 47786016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 181
Target Start/End: Original strand, 16125232 - 16125352
Alignment:
Q  68 ggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaat-------cgtaaaatctcaatcaaaattgaaggattttactcaactacttt 160  Q
    ||||||||||||||| | |||||||||| || ||||||||||| |||||       ||||||||| |||||||||| ||||||||||||||||  || ||    
T  16125232 ggttgttaaaatcggaactttacttcaggtcgaaagggaatagtaaaattgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatt 16125331  T
Q  161 tgtagaatctatataggaaat 181  Q
    ||||||||| ||||| |||||    
T  16125332 tgtagaatcgatataagaaat 16125352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 16434810 - 16434673
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatatagg------aaatgataaacaaaatcgatggattcta 205  Q
    |||||||||||||  |||||||||| |||||||||||||| || |||||||||||||  ||||| |      ||||   || ||||||||||||||||||    
T  16434810 aaaatcgtaaaattgcaatcaaaatcgaaggattttactcgacaacttttgtagaattgatataagataacaaaatcgcaatcaaaatcgatggattcta 16434711  T
Q  206 ccaaaac-aaaagtaatgctaaatgtatgttataaatg 242  Q
    ||||||| |||| ||||| ||||| |||||||||||||    
T  16434710 ccaaaacaaaaattaatgataaatatatgttataaatg 16434673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 23528953 - 23528888
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    |||||||||| |||||||||| ||||||||||||||||  |||||||||||||| |||||||||||    
T  23528953 tcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataggaaat 23528888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 19009743 - 19009845
Alignment:
Q  86 tttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatatagga 178  Q
    ||||||||||||| |||||||||||||||||||       ||||||| ||||||||||  |||||||||||||||  ||||||||| |||| ||||||||    
T  19009743 tttacttcagatcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcaaaggattttactcaagaacttttgtaaaatcgatatagga 19009842  T
Q  179 aat 181  Q
    |||    
T  19009843 aat 19009845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 21242845 - 21242918
Alignment:
Q  102 agggaatagcaaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatata 175  Q
    |||||||| |||||||||||||||  ||| | |||||||| |||||||||||||| |||||||||||| |||||    
T  21242845 agggaataacaaaatcgtaaaatcgtaattacaattgaagaattttactcaactaattttgtagaatcgatata 21242918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 13100544 - 13100422
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| |||||||||| |||||||||  || ||||||||| |||||||||       ||||||| ||||||||||  |||||||||||||||  ||     
T  13100544 aaggttgtcaaaatcgggactttacttcaagtcgaaagggaatggcaaaatcggaactcgtaaaatcgcaatcaaaatcaaaggattttactcaaggaca 13100445  T
Q  159 tttgtagaatctatataggaaat 181  Q
    ||||||||||| ||||| |||||    
T  13100444 tttgtagaatcgatataagaaat 13100422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 181
Target Start/End: Original strand, 25146543 - 25146665
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaat-------cgtaaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| |||||| ||| |||||||||| |  |||||||||||||||||       ||||||||| |||||||||| ||||||||||||||||   ||    
T  25146543 aaggttgtcaaaatcaggactttacttcaggttgaaagggaatagcaaaatcggaaatcgtaaaatcgcaatcaaaatcgaaggattttactcaaggtct 25146642  T
Q  159 tttgtagaatctatataggaaat 181  Q
    || |||||||| |||||| ||||    
T  25146643 ttcgtagaatcgatatagaaaat 25146665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 166
Target Start/End: Complemental strand, 12513625 - 12513518
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| ||||| |||||||| |||||| ||||||| ||| ||||||||||       ||||||| ||| ||||||  ||||||||||||||||||||    
T  12513625 aaggttgtcaaaattgggattttgcttcaggtcaaaagagaagagcaaaatcgacaattgtaaaatcgcaaccaaaatcaaaggattttactcaactact 12513526  T
Q  159 tttgtaga 166  Q
    | ||||||    
T  12513525 tctgtaga 12513518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 174
Target Start/End: Complemental strand, 30619299 - 30619181
Alignment:
Q  61 caacaaaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcgtaaa------atctcaatcaaaattgaaggattttactcaac 154  Q
    |||| |||||||| |||||||||||||| |||||| || |||| ||| ||||||||||  ||      ||| |||  ||||| |||||||||||||||||    
T  30619299 caaccaaggttgtcaaaatcgggatttt-cttcaggtcgaaagagaagagcaaaatcgacaatcgtaaatcgcaacaaaaatcgaaggattttactcaac 30619201  T
Q  155 tacttttgtagaatctatat 174  Q
    ||||||||||||||| ||||    
T  30619200 tacttttgtagaatcgatat 30619181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 181
Target Start/End: Original strand, 41032548 - 41032670
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaat-------cgtaaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| ||||| ||||||||||||||| |  |||| ||| ||||||||       ||||||||| |||  ||||| |||| |||||||||||||| |    
T  41032548 aaggttgtcaaaatagggattttacttcaggttgaaagagaagagcaaaattgataatcgtaaaatcgcaactaaaatcgaagaattttactcaactagt 41032647  T
Q  159 tttgtagaatctatataggaaat 181  Q
    ||||||||||| ||||| |||||    
T  41032648 tttgtagaatcgatataagaaat 41032670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 241
Target Start/End: Original strand, 12002793 - 12002836
Alignment:
Q  198 ggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||    
T  12002793 ggattctaccaaaacaaaaataatgctaaatatatgttataaat 12002836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 181
Target Start/End: Complemental strand, 32881619 - 32881552
Alignment:
Q  114 aatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    |||||||||||| |||   |||| |||||||||||||||||||| ||||||||||| ||||| |||||    
T  32881619 aatcgtaaaatcgcaactgaaatcgaaggattttactcaactacgtttgtagaatcgatataagaaat 32881552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 42179976 - 42180037
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    ||||||||||||||| |||||||| |||  |||| ||| || ||||||||||||||||||||    
T  42179976 caaaatcgatggattttaccaaaaaaaatataatactatatatatgttataaatggtatata 42180037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 9954771 - 9954823
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg 118  Q
    |||||||| |||||||||| ||||||| || || |||||||||||||||||||    
T  9954771 aaggttgtcaaaatcgggactttacttaaggtcgaaagggaatagcaaaatcg 9954823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 178
Target Start/End: Original strand, 17197313 - 17197423
Alignment:
Q  75 aaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactacttttgtagaa 167  Q
    |||||||||| |||||||||  || ||||||| |||||||||||       ||||||| |||  ||||| ||||||||||||||||  ||||||||||||    
T  17197313 aaaatcgggactttacttcaagtcgaaagggagtagcaaaatcggaactcgtaaaatcgcaactaaaatcgaaggattttactcaaggacttttgtagaa 17197412  T
Q  168 tctatatagga 178  Q
    || || |||||    
T  17197413 tcaatgtagga 17197423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 169
Target Start/End: Original strand, 17869529 - 17869635
Alignment:
Q  70 ttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactacttttg 162  Q
    |||| |||||||||| | || ||||| ||||||||||| ||||||||||       ||||||| ||||||||||  |||||||||||||||  ||||||     
T  17869529 ttgtcaaaatcgggactctaattcaggtcaaaagggaagagcaaaatcgggacacgtaaaatcgcaatcaaaatcaaaggattttactcaaggactttta 17869628  T
Q  163 tagaatc 169  Q
    |||||||    
T  17869629 tagaatc 17869635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 181
Target Start/End: Original strand, 9954817 - 9954930
Alignment:
Q  75 aaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactacttttgtagaa 167  Q
    |||||||| | ||||||| || || |||||||||||||||||||       ||||||| |||||||||| ||||||||||||  ||  ||||||  ||||    
T  9954817 aaaatcggaactttacttaaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttaccaaaggacttttcaagaa 9954916  T
Q  168 tctatataggaaat 181  Q
    || |||||||||||    
T  9954917 tccatataggaaat 9954930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 39845083 - 39845149
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatatagga 178  Q
    ||||| |||||||  |||| ||||||||| ||||||||||||||| ||||||| | || ||||||||    
T  39845083 aaaattgtaaaattgcaattaaaattgaatgattttactcaactatttttgtaaagtcgatatagga 39845149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 17197453 - 17197505
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||| ||||||||||||||||||| ||||| ||||| ||||||| ||||    
T  17197453 caaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgttacaaat 17197505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 117
Target Start/End: Original strand, 27917176 - 27917225
Alignment:
Q  68 ggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatc 117  Q
    |||||||||||| || ||||| ||||||||||||||| || |||||||||    
T  27917176 ggttgttaaaattggaattttgcttcagatcaaaaggaaagagcaaaatc 27917225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 8773565 - 8773513
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaat 168  Q
    |||||||||| |||| ||||||||||||||||||| ||  | |||||||||||    
T  8773565 tcgtaaaatcgcaattaaaattgaaggattttacttaaggatttttgtagaat 8773513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 12002695 - 12002751
Alignment:
Q  120 aaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatatag 176  Q
    |||||| |||| ||||| |||||||||||||||   |||||||||||||| ||||||    
T  12002695 aaaatcacaataaaaatcgaaggattttactcatagacttttgtagaatcgatatag 12002751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 66 - 249
Target Start/End: Complemental strand, 11879954 - 11879757
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaa-------tcgtaaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| ||||||||||||||||||||| |||||||||||||| ||||       |||||||||| |||||||||| ||||||||||||  ||  |||    
T  11879954 aaggttgtcaaaatcgggattttacttcaggtcaaaagggaatagtaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttacctaagaact 11879855  T
Q  159 tttgtagaatctatataggaaatgataaa--------caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    ||| ||||||| |||||| ||||  ||||        ||||||||||||||| |||||||| || | |||| |||||| ||||||||||||||||||||    
T  11879854 tttatagaatcgatatagaaaattgtaaaatcgcattcaaaatcgatggattttaccaaaa-aataataatactaaatatatgttataaatggtatata 11879757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 66 - 249
Target Start/End: Complemental strand, 11897370 - 11897173
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaa-------tcgtaaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| ||||||||||||||||||||| |||||||||||||| ||||       |||||||||| |||||||||| ||||||||||||  ||  |||    
T  11897370 aaggttgtcaaaatcgggattttacttcaggtcaaaagggaatagtaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttacctaagaact 11897271  T
Q  159 tttgtagaatctatataggaaatgataaa--------caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    ||| ||||||| |||||| ||||  ||||        ||||||||||||||| |||||||| || | |||| |||||| ||||||||||||||||||||    
T  11897270 tttatagaatcgatatagaaaattgtaaaatcgcattcaaaatcgatggattttaccaaaa-aataataatactaaatatatgttataaatggtatata 11897173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 181
Target Start/End: Complemental strand, 17647358 - 17647229
Alignment:
Q  59 tccaacaaaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactc 151  Q
    |||||||||||||||||||||||||||||| |||||| || |||| ||  ||||||||||       ||||||| |||||||||| ||||||||||||||    
T  17647358 tccaacaaaggttgttaaaatcgggattttgcttcaggtcgaaagagatgagcaaaatcgacaatcataaaatcgcaatcaaaatcgaaggattttactc 17647259  T
Q  152 aactacttttgtagaatctatataggaaat 181  Q
    ||||| |||||||||||| ||||| |||||    
T  17647258 aactagttttgtagaatcgatataagaaat 17647229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 114 - 249
Target Start/End: Original strand, 15761188 - 15761331
Alignment:
Q  114 aatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattcta 205  Q
    |||||||||||| ||||  |||| |||||||||||||||| ||||||||||||||| ||||| ||| |  ||||        ||||||||||||||| ||    
T  15761188 aatcgtaaaatcgcaatataaatcgaaggattttactcaattacttttgtagaatcgatataagaagtagtaaaatcgcaatcaaaatcgatggatttta 15761287  T
Q  206 ccaaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    ||||||||||| ||||||||||| |||||||||||| |||||||    
T  15761288 ccaaaacaaaaataatgctaaatatatgttataaattgtatata 15761331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 181
Target Start/End: Complemental strand, 5922400 - 5922280
Alignment:
Q  68 ggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatc-------gtaaaatctcaatcaaaattgaaggattttactcaactacttt 160  Q
    |||||| |||||||||| |||||||||| || ||||||||||||||||||       ||| |||| |||||||||| ||||||||||||||||  |||||    
T  5922400 ggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttt 5922301  T
Q  161 tgtagaatctatataggaaat 181  Q
    ||||||||| |||||||||||    
T  5922300 tgtagaatcgatataggaaat 5922280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 248
Target Start/End: Complemental strand, 45403379 - 45403187
Alignment:
Q  70 ttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactacttttg 162  Q
    |||| |||||||||| |||| ||||  || |||||||||||||||||||       ||||||| |||||||||| ||||||||||||| ||  |||||||    
T  45403379 ttgtcaaaatcgggactttatttcacgtcgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaaggattttacttaaagacttttg 45403280  T
Q  163 tagaatctatataggaaatgataaa-------caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatat 248  Q
    ||||||| |||||||||||  ||||       |||||||||| |||| |||||||| || | ||||  ||||| |||||||||||||||||||    
T  45403279 tagaatcgatataggaaattgtaaaacgcaatcaaaatcgatagattttaccaaaaaaataataatattaaatatatgttataaatggtatat 45403187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 114 - 249
Target Start/End: Original strand, 29384142 - 29384289
Alignment:
Q  114 aatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattcta 205  Q
    |||||||||||| ||| |||||| |||||||||||||||||||||||||||||||  ||||| |||||  ||||        ||||||||||||||| ||    
T  29384142 aatcgtaaaatcgcaaccaaaatcgaaggattttactcaactacttttgtagaattaatataagaaatcgtaaaatcgcaatcaaaatcgatggatttta 29384241  T
Q  206 ccaaaacaaa----agtaatgctaaatgtatgttataaatggtatata 249  Q
    |||||| |||    | |||| |||||| ||||||||||||||||||||    
T  29384242 ccaaaaaaaaaaatactaatactaaatatatgttataaatggtatata 29384289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 167
Target Start/End: Complemental strand, 17566452 - 17566344
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaat-------cgtaaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||| |||||||| ||||||| |||||| ||||||||||| ||||||||       ||||||||  |||||||||| |||| ||||||||||||||||    
T  17566452 aaggtttttaaaatcaggattttgcttcaggtcaaaagggaagagcaaaattgaaaatcgtaaaattgcaatcaaaatcgaagaattttactcaactact 17566353  T
Q  159 tttgtagaa 167  Q
    |||||||||    
T  17566352 tttgtagaa 17566344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 181
Target Start/End: Original strand, 24414062 - 24414184
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaat-------cgtaaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| ||||| || | |||||||||  || |||||||||||||||||       ||||||||| |||||||||| ||||||||||||||||  | |    
T  24414062 aaggttgtcaaaattggaactttacttcatgtcgaaagggaatagcaaaatttagactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaatt 24414161  T
Q  159 tttgtagaatctatataggaaat 181  Q
    ||||||||||| |||||||||||    
T  24414162 tttgtagaatcgatataggaaat 24414184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 114 - 249
Target Start/End: Complemental strand, 6811118 - 6810978
Alignment:
Q  114 aatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa-------caaaatcgatggattctac 206  Q
    |||||||||||| ||| |||||| |||| |||||| |||||||||||||||||||  ||||| |||||   |||       ||||||||||||||| |||    
T  6811118 aatcgtaaaatcgcaaccaaaatcgaagaattttaatcaactacttttgtagaatagatataagaaattgaaaatcgcaatcaaaatcgatggattttac 6811019  T
Q  207 caaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    ||||  |||| |||| |||||| ||||||||||||| ||||||    
T  6811018 caaa--aaaaataatactaaatatatgttataaatgatatata 6810978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 181
Target Start/End: Original strand, 7489058 - 7489180
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaat-------cgtaaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| |||||| ||| |||||||||  || ||||| |||||||||||       ||||||||| |||||||||| | ||||||||||||||  |||    
T  7489058 aaggttgtcaaaatcaggactttacttcaagtcgaaaggaaatagcaaaattaggactcgtaaaatcgcaatcaaaatcggaggattttactcaaggact 7489157  T
Q  159 tttgtagaatctatataggaaat 181  Q
    ||||||||||| |||||| ||||    
T  7489158 tttgtagaatcgatatagaaaat 7489180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 181
Target Start/End: Original strand, 22910033 - 22910100
Alignment:
Q  114 aatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    |||||||||||| ||| | |||||||||||||||| ||||||| |||||||||||| ||||| |||||    
T  22910033 aatcgtaaaatcgcaaccgaaattgaaggattttattcaactatttttgtagaatcgatataagaaat 22910100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 15294963 - 15294901
Alignment:
Q  119 taaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    ||||||| |||||||||| ||||||||||||||||  |||||||||||||| ||||| |||||    
T  15294963 taaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatccatataagaaat 15294901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 15475332 - 15475270
Alignment:
Q  119 taaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    ||||||| |||||||||| ||||||||||||||||  |||||||||||||| ||||| |||||    
T  15475332 taaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatccatataagaaat 15475270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 1018093 - 1018146
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    |||||||||| ||||||||||||| |||| ||||| ||||||||||||||||||    
T  1018093 caaaatcgatagattctaccaaaataaaaataatgttaaatgtatgttataaat 1018146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 7262059 - 7262006
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatc 169  Q
    |||||||||| ||||||||||| |||||||||||||||  ||||||||||||||    
T  7262059 tcgtaaaatcgcaatcaaaattaaaggattttactcaaggacttttgtagaatc 7262006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 174
Target Start/End: Original strand, 19704225 - 19704347
Alignment:
Q  59 tccaacaaaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaa-------tcgtaaaatctcaatcaaaattgaaggattttactc 151  Q
    |||||||| | |||||| ||| ||||||||||||||  || ||||||||||||||||       |||||||||| ||||||||||  ||||| |||||||    
T  19704225 tccaacaaggtttgttagaattgggattttacttcaagtccaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcaaaggaatttactc 19704324  T
Q  152 aactacttttgtagaatctatat 174  Q
    ||  ||| |||||||||| ||||    
T  19704325 aaggactgttgtagaatcgatat 19704347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 24056414 - 24056461
Alignment:
Q  128 aatcaaaattgaaggattttactcaactacttttgtagaatctatata 175  Q
    ||||||||| ||||||||||||||||||| |||||||||||| |||||    
T  24056414 aatcaaaatcgaaggattttactcaactagttttgtagaatcaatata 24056461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 26574948 - 26575011
Alignment:
Q  115 atcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatatagga 178  Q
    ||||||||||| |||||||||||||||||||||||  ||||| || ||||||||  ||||||||    
T  26574948 atcgtaaaatcgcaatcaaaattgaaggattttacctaactatttatgtagaattcatatagga 26575011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 2040416 - 2040354
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatatagga 178  Q
    |||||||||| |||||||||| |||||||||||||||   |||||||||||||| || |||||    
T  2040416 tcgtaaaatcgcaatcaaaatcgaaggattttactcatggacttttgtagaatcgatgtagga 2040354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 26575035 - 26575097
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatataa 250  Q
    ||||||||||||||||||||||||||||| | ||||||||  |||||| ||||| | ||||||    
T  26575035 caaaatcgatggattctaccaaaacaaaattgatgctaaaaatatgttttaaattgaatataa 26575097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 27836131 - 27836181
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtaga 166  Q
    |||||||||| |||||||||| ||||||||||||||||  |||||||||||    
T  27836131 tcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtaga 27836181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 175
Target Start/End: Complemental strand, 15231920 - 15231859
Alignment:
Q  114 aatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatata 175  Q
    |||||||||||| |||  ||||| | | |||||||||||||||||||||||||||| |||||    
T  15231920 aatcgtaaaatcgcaactaaaatcgtacgattttactcaactacttttgtagaatcgatata 15231859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 32424631 - 32424566
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    |||||||||| |||| ||||| ||||||||||||||||  | |||||||||||| | |||||||||    
T  32424631 tcgtaaaatcgcaattaaaatcgaaggattttactcaaggagttttgtagaatcgagataggaaat 32424566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 2040323 - 2040273
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataa 239  Q
    ||||||||| ||||||||||||||||||| ||||| ||||| ||||||||||    
T  2040323 caaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgttataa 2040273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 175
Target Start/End: Original strand, 40541652 - 40541711
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatata 175  Q
    |||||||||| |||||||||||||| ||||||| ||||  |||| ||||||||| |||||    
T  40541652 tcgtaaaatcgcaatcaaaattgaaagattttattcaaggacttctgtagaatcgatata 40541711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 242
Target Start/End: Original strand, 30240282 - 30240336
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatg 242  Q
    |||||| |||||||||||||||||||||| |||| |||||| ||| | |||||||    
T  30240282 caaaattgatggattctaccaaaacaaaaataatactaaatatatatcataaatg 30240336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 3094092 - 3094125
Alignment:
Q  132 aaaattgaaggattttactcaactacttttgtag 165  Q
    |||||||||||||||||||||| |||||||||||    
T  3094092 aaaattgaaggattttactcaattacttttgtag 3094125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 16752320 - 16752268
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaat 168  Q
    |||||||||| ||| |||||| ||||||||||||||||  | |||||||||||    
T  16752320 tcgtaaaatcgcaaacaaaatcgaaggattttactcaaggaattttgtagaat 16752268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 4e-25; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 249
Target Start/End: Original strand, 25538917 - 25539118
Alignment:
Q  63 acaaaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaact 155  Q
    ||||||||||| |||||||| | ||||| |||| || ||||||||||| |||||||       ||||||| ||||||||||| |||||||||||| ||||    
T  25538917 acaaaggttgtcaaaatcggtactttacatcaggtcgaaagggaatagaaaaatcgggtctcgtaaaatcgcaatcaaaattaaaggattttactgaact 25539016  T
Q  156 acttttgtagaatctatataggaaatgataaa--------caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtata 247  Q
    |||||||||||||| |||||  ||||  ||||        |||||||||| |||| |||||||||| || ||||||||||| ||||||||| || |||||    
T  25539017 acttttgtagaatcgatataaaaaattgtaaaattgcaatcaaaatcgatagattttaccaaaacagaaataatgctaaatatatgttatatattgtata 25539116  T
Q  248 ta 249  Q
    ||    
T  25539117 ta 25539118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 13502501 - 13502639
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattc 203  Q
    ||||||||||||||  ||||||||||||||||| ||| ||||||| |||||||||||||||||| |||||  ||||        |||||||||||||||     
T  13502501 aaaatcgtaaaatcgtaatcaaaattgaaggatattagtcaactatttttgtagaatctatataagaaatcgtaaaatcgcaatcaaaatcgatggattt 13502600  T
Q  204 taccaaaacaaaagtaatgctaaatgtatgttataaatg 242  Q
    ||||||||||||| ||||  ||||| |||||||||||||    
T  13502601 taccaaaacaaaaataatattaaatatatgttataaatg 13502639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 112 - 247
Target Start/End: Complemental strand, 16767086 - 16766944
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattc 203  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||  ||||        ||||||| | |||||     
T  16767086 aaaatcataaaatcgcaatcaaaattgaaggattttactcaactacttttatagaatcgatataagaaatcgtaaaatcgcaatcaaaatcaaaggatt- 16766988  T
Q  204 taccaaaacaaaagtaatgctaaatgtatgttataaatggtata 247  Q
    ||||||||||||| ||||||||||| | |||||||||| |||||    
T  16766987 taccaaaacaaaaataatgctaaatatttgttataaattgtata 16766944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 65 - 181
Target Start/End: Complemental strand, 1405138 - 1405015
Alignment:
Q  65 aaaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactac 157  Q
    ||||||||| ||||||| || |||| || || ||||||||||||||||||||||       ||||||| |||||||||| ||||||||||||||||  ||    
T  1405138 aaaggttgtcaaaatcgagactttaatttaggtcaaaagggaatagcaaaatcggtactcataaaatcgcaatcaaaatcgaaggattttactcaagaac 1405039  T
Q  158 ttttgtagaatctatataggaaat 181  Q
    |||||||||||| |||||||||||    
T  1405038 ttttgtagaatcgatataggaaat 1405015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 178
Target Start/End: Complemental strand, 19245943 - 19245824
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatc-------gtaaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| |||||||||||||| |||||  |  ||||||||||||||||||       |||||||| ||||||||||  |||||||||||| |||||||    
T  19245943 aaggttgtcaaaatcgggattttgcttcaagttgaaagggaatagcaaaatcaaaaatcgtaaaatcgcaatcaaaatctaaggattttacttaactact 19245844  T
Q  159 tttgtagaatctatatagga 178  Q
    ||||||||||| ||||||||    
T  19245843 tttgtagaatcgatatagga 19245824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 20064077 - 20063955
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| |||||||||  |||||||||| |  |||||||||||||||||||       ||||||| |||||||||| |||| |||||||||||  |||    
T  20064077 aaggttgtcaaaatcggggctttacttcaggttgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaagaattttactcaaggact 20063978  T
Q  159 tttgtagaatctatataggaaat 181  Q
    ||||||||||| |||||||||||    
T  20063977 tttgtagaatcgatataggaaat 20063955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 112 - 249
Target Start/End: Complemental strand, 27407092 - 27406947
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattc 203  Q
    |||||||||| ||| ||||||||||  ||| |||||||||||||||||||| | |||| ||||| ||||| |||||        |||||| ||||||||     
T  27407092 aaaatcgtaatatcgcaatcaaaatccaagaattttactcaactacttttggataatcaatataagaaatcataaaatcgcaatcaaaattgatggattt 27406993  T
Q  204 taccaaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
     |||||||||||| ||||||||||| ||| |||||||  |||||||    
T  27406992 caccaaaacaaaaataatgctaaatatatattataaactgtatata 27406947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 169
Target Start/End: Original strand, 20034006 - 20034107
Alignment:
Q  75 aaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactacttttgtagaa 167  Q
    |||||||||| |||||||||  || ||||||| |||||||||||       ||||||| |||||||||||||||||||||||||||  ||||||||||||    
T  20034006 aaaatcgggactttacttcaagtcgaaagggagtagcaaaatcgagactcgtaaaatcgcaatcaaaattgaaggattttactcaaggacttttgtagaa 20034105  T
Q  168 tc 169  Q
    ||    
T  20034106 tc 20034107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 974635 - 974573
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatatagga 178  Q
    |||||||||| |||||||||| ||||||||||||||||  |||||||||||||| ||||||||    
T  974635 tcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatatagga 974573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 174
Target Start/End: Complemental strand, 8428576 - 8428461
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| |||||||||||||| ||| || || ||||||||||| ||||||        ||||||| |||||||||| |||||||||| |||||||| |    
T  8428576 aaggttgtcaaaatcgggattttgctttaggtcgaaagggaatagaaaaatcaaaaattctaaaatcgcaatcaaaatcgaaggattttgctcaactatt 8428477  T
Q  159 tttgtagaatctatat 174  Q
    ||||||||||| ||||    
T  8428476 tttgtagaatcaatat 8428461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 250
Target Start/End: Original strand, 31237755 - 31237950
Alignment:
Q  70 ttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactacttttg 162  Q
    |||| |||||| ||| |||||||||| |||||||||||||| |||||||       ||||||| ||||||| || ||||||||||||||||  |||||||    
T  31237755 ttgtcaaaatcaggactttacttcagttcaaaagggaatagtaaaatcgggactcgtaaaatcgcaatcaatatcgaaggattttactcaaggacttttg 31237854  T
Q  163 tagaatctatataggaaatgataaa--------caaaatcgatggattctaccaaaacaaaagtaatgc-taaatgtatgttataaatggtatataa 250  Q
    || |||| |||||| ||||  ||||        ||||||||||||||| |||||||| || | |||| | | ||| |||||||||||||||||||||    
T  31237855 taaaatcgatatagaaaattgtaaaattgcaatcaaaatcgatggattttaccaaaa-aataataatacatgaatatatgttataaatggtatataa 31237950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 76 - 178
Target Start/End: Original strand, 27523881 - 27523990
Alignment:
Q  76 aaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactacttttgtagaat 168  Q
    ||||||||| |||||||||  || ||||||| |||||||||||       ||||||| |||||||||| ||||||||||||||||  |||||||||||||    
T  27523881 aaatcgggactttacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaat 27523980  T
Q  169 ctatatagga 178  Q
    | || |||||    
T  27523981 cgatgtagga 27523990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 19262148 - 19262213
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    |||||||||| |||||||||| ||| ||||||||||||  |||||||||||||| ||||| |||||    
T  19262148 tcgtaaaatcgcaatcaaaatcgaaagattttactcaaggacttttgtagaatcgatataagaaat 19262213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 41002229 - 41002177
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||    
T  41002229 caaaatcga-ggattctaccaaaacaaaaataatgctaaatatatgttataaat 41002177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 30433169 - 30433047
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| ||||||||||  ||||||||| || ||| | ||||| |||||||       ||||||| |||||||||| ||| ||||||||||||  |||    
T  30433169 aaggttgtcaaaatcgggacattacttcaggtcgaaaagcaatagaaaaatcgggactcataaaatcgcaatcaaaatcgaatgattttactcaaggact 30433070  T
Q  159 tttgtagaatctatataggaaat 181  Q
    ||| ||||||| |||||||||||    
T  30433069 tttatagaatcgatataggaaat 30433047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 178
Target Start/End: Complemental strand, 34578183 - 34578124
Alignment:
Q  119 taaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatatagga 178  Q
    ||||||| ||||||||||||||||||||||||||   |||||||||||||| || |||||    
T  34578183 taaaatcgcaatcaaaattgaaggattttactcatggacttttgtagaatcgatgtagga 34578124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 19492150 - 19492088
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaa-agtaatgctaaatgtatgttataaatggtatata 249  Q
    ||||||||||||||| |||||||| ||| | ||||||||||| |||||||||||| |||||||    
T  19492150 caaaatcgatggattttaccaaaaaaaataataatgctaaatatatgttataaattgtatata 19492088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 175
Target Start/End: Original strand, 21869096 - 21869212
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    ||||| || |||||||||| |||||||||  || ||||||||||| |||||||       ||||||| |||| ||||| ||||||||||| ||||  |||    
T  21869096 aaggtcgtcaaaatcgggactttacttcaagtcgaaagggaatagaaaaatcgggactcttaaaatcgcaattaaaatcgaaggattttattcaatgact 21869195  T
Q  159 tttgtagaatctatata 175  Q
    ||||||||||| |||||    
T  21869196 tttgtagaatcgatata 21869212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 249
Target Start/End: Original strand, 35565788 - 35565926
Alignment:
Q  118 gtaaaatctcaatcaaaattgaaggatttta---ctcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattctac 206  Q
    |||||||| |||  ||||| |||||||||||   ||||||||||||||||||||| ||||| ||||| |||||        ||||||||||||||| |||    
T  35565788 gtaaaatcgcaactaaaatcgaaggattttattactcaactacttttgtagaatcgatataagaaatcataaaatcacaatcaaaatcgatggattttac 35565887  T
Q  207 caaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    ||||| ||    ||| |||||| |||||||||||| |||||||    
T  35565888 caaaaaaa----aatactaaatatatgttataaattgtatata 35565926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 974542 - 974490
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||| ||||||||||||||||||| ||||| ||||| ||||||||||||    
T  974542 caaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgttataaat 974490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 7302079 - 7302026
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatc 169  Q
    |||||||||  |||||||||| ||||||||||||||||  ||||||||||||||    
T  7302079 tcgtaaaattgcaatcaaaatcgaaggattttactcaaggacttttgtagaatc 7302026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 20034147 - 20034199
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||| ||||||||||||||||||| ||||| ||||| ||||||||||||    
T  20034147 caaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgttataaat 20034199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 21869246 - 21869298
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||||| ||||||||||||||||| | ||||||||| ||||||||||||    
T  21869246 caaaatcgatg-attctaccaaaacaaaaattatgctaaatatatgttataaat 21869298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 31023519 - 31023466
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||||||||| |||||||| |||| ||||| ||||| ||||||||||||    
T  31023519 caaaatcgatggattttaccaaaataaaaataatgttaaatatatgttataaat 31023466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 34578093 - 34578041
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||| ||||||||||||||||||| ||||| ||||| ||||||||||||    
T  34578093 caaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgttataaat 34578041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 34841798 - 34841737
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    |||||||||||||||||| | |||||||| ||||  ||||| |||||||||||| |||||||    
T  34841798 caaaatcgatggattctatccaaacaaaaataataataaatatatgttataaattgtatata 34841737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 15628029 - 15627986
Alignment:
Q  128 aatcaaaattgaaggattttactcaactacttttgtagaatcta 171  Q
    ||||||||| ||||| ||||||||||||||||||||||| ||||    
T  15628029 aatcaaaatcgaaggtttttactcaactacttttgtagagtcta 15627986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 150
Target Start/End: Complemental strand, 16767223 - 16767185
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttact 150  Q
    |||||| ||||||| ||||||||||||||||||||||||    
T  16767223 aaaatcataaaatcgcaatcaaaattgaaggattttact 16767185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 19519591 - 19519529
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatataa 250  Q
    |||||| ||| |||||||| ||||| ||| ||||||||||| |||||||||||| | ||||||    
T  19519591 caaaattgatagattctacaaaaaccaaaataatgctaaatatatgttataaattgcatataa 19519529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 7301991 - 7301939
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||| |||||||||||||| |||| ||||| ||||| ||||||||||||    
T  7301991 caaaatcga-ggattctaccaaaataaaaataatgttaaatatatgttataaat 7301939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 29661170 - 29661101
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    |||||||||||| | |||| ||||| ||||| ||||| | |||||||||||||| ||| ||||| |||||    
T  29661170 aaaatcgtaaaaccgcaattaaaatcgaaggtttttattaaactacttttgtagtatcgatataagaaat 29661101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 36430145 - 36430092
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatc 169  Q
    |||||||||| |||||||||| ||||||| ||||||||  | ||||||||||||    
T  36430145 tcgtaaaatcgcaatcaaaatcgaaggatattactcaataatttttgtagaatc 36430092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 24474037 - 24473985
Alignment:
Q  189 aaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||| |||||||||||||||||||| ||||| |||||  ||| |||||||    
T  24474037 aaaatcgttggattctaccaaaacaaaattaatgataaatagatgatataaat 24473985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 169
Target Start/End: Original strand, 27749338 - 27749394
Alignment:
Q  113 aaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatc 169  Q
    ||||||||||||| ||||| |||||||| || |||||||||  | ||||||||||||    
T  27749338 aaatcgtaaaatcgcaatctaaattgaatgagtttactcaaggatttttgtagaatc 27749394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 31062347 - 31062311
Alignment:
Q  127 caatcaaaattgaaggattttactcaactacttttgt 163  Q
    |||||||||| ||| ||||||||||||||||||||||    
T  31062347 caatcaaaatcgaaagattttactcaactacttttgt 31062311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 249
Target Start/End: Complemental strand, 8795 - 8600
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||| | |||||||||| |||||||||| || |||||||||| ||||||||       ||||||| ||||||||||||||||||||||||||| || |    
T  8795 aaggttctcaaaatcgggactttacttcaggtcgaaagggaataacaaaatcggaactcgtaaaatcgcaatcaaaattgaaggattttactcaagtatt 8696  T
Q  159 tttgtagaatctatataggaaatgataaa--------caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    || |||||||| |||||||||||  ||||        ||||||||||||||| ||||||   |||| |||| |||||| |||| |||||||||||||||    
T  8695 ttcgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttaccaa---aaaaataatactaaatatatggtataaatggtatata 8600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 66 - 181
Target Start/End: Original strand, 56200 - 56322
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| ||||||| || |||||||||| || |||||||||||||||||||       ||||||| |||||||||| ||||||||||||||||  |||    
T  56200 aaggttgtcaaaatcgagactttacttcaggtcgaaagggaatagcaaaatcgagacatctaaaatcgcaatcaaaatcgaaggattttactcaaggact 56299  T
Q  159 tttgtagaatctatataggaaat 181  Q
    ||||||||||| |||||||||||    
T  56300 tttgtagaatcgatataggaaat 56322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 7e-24; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 7223869 - 7223747
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| |||||||||| |||||||||| || |||||||||||||||||||       ||||||  |||||||||| ||||||||||||||||  |||    
T  7223869 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaattgcaatcaaaatcgaaggattttactcaaggact 7223770  T
Q  159 tttgtagaatctatataggaaat 181  Q
    ||||||||||| |||||||||||    
T  7223769 tttgtagaatcgatataggaaat 7223747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 66 - 181
Target Start/End: Original strand, 22498215 - 22498337
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaat-------cgtaaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| ||||| |||| |||||||||| || |||||||||||||||||       ||||||||| |||||||||||||| ||||||||||||  |||    
T  22498215 aaggttgtcaaaattgggactttacttcaggtcgaaagggaatagcaaaattgggactcgtaaaatcgcaatcaaaattgaacgattttactcaaagact 22498314  T
Q  159 tttgtagaatctatataggaaat 181  Q
    ||||||||||| |||||||||||    
T  22498315 tttgtagaatcgatataggaaat 22498337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 19748687 - 19748565
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| |||||||||| |||| ||||| |  |||||||||||||||||||       ||||||| |||||||||| ||||||||||||||||  |||    
T  19748687 aaggttgtcaaaatcgggactttaattcaggttgaaagggaatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaggattttactcaaggact 19748588  T
Q  159 tttgtagaatctatataggaaat 181  Q
    ||||||||||| |||||||||||    
T  19748587 tttgtagaatcgatataggaaat 19748565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 249
Target Start/End: Original strand, 7918125 - 7918320
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatc-------gtaaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| |||||||||  |||||||||| || ||||||||||||| ||||       |||||||  |||||||||| |||| |||||||||||  |||    
T  7918125 aaggttgtcaaaatcggggctttacttcaggtcgaaagggaatagcagaatcaggactcgtaaaattgcaatcaaaatcgaagaattttactcaaggact 7918224  T
Q  159 tttgtagaatctatataggaaatgataaa--------caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    ||||||||||| |||||||||||  ||||        ||||||||||||||| ||||||   |||| |||| |||||| ||||||||||||| ||||||    
T  7918225 tttgtagaatcaatataggaaattgtaaaatcgcaatcaaaatcgatggattttaccaa---aaaaataatactaaatttatgttataaatgatatata 7918320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 30912176 - 30912303
Alignment:
Q  61 caacaaaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatc-------gtaaaatctcaatcaaaattgaaggattttactcaa 153  Q
    |||| |||||||| |||||||| ||||| |||||| |  |||| |||||||||||||       |||||||||||| |||||||||||||||||| ||||    
T  30912176 caactaaggttgtcaaaatcggaattttgcttcaggttgaaagagaatagcaaaatcgataatcgtaaaatctcaaccaaaattgaaggattttattcaa 30912275  T
Q  154 ctacttttgtagaatctatataggaaat 181  Q
    ||||||||||| |||| ||||| |||||    
T  30912276 ctacttttgtaaaatcgatataagaaat 30912303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 247
Target Start/End: Original strand, 4841611 - 4841800
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtag 165  Q
    |||||| |||||||||||||||| ||| |  || ||||  || ||| |||||| |||||| ||||||||||  |||||||||||||||||||||||||||    
T  4841611 aaggtttttaaaatcgggattttgctttacgtcgaaagtaaagagcgaaatcgaaaaatcacaatcaaaatcaaaggattttactcaactacttttgtag 4841710  T
Q  166 aatctatataggaaatgataaa--------caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtata 247  Q
    ||||   ||| |||||  ||||        ||||||||||| ||| |||||||||||||   |||| |||| |||||||||||| |||||    
T  4841711 aatcgggataagaaatcgtaaaatcgcaatcaaaatcgatgtattttaccaaaacaaaaaatatgcaaaatatatgttataaattgtata 4841800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 181
Target Start/End: Original strand, 11327337 - 11327459
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| |||||||||  |||||||||| |  |||||||||||||||||||       ||||||| |||||||||| |||| |||||||||||  |||    
T  11327337 aaggttgtcaaaatcggggctttacttcaggttgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaagaattttactcaaggact 11327436  T
Q  159 tttgtagaatctatataggaaat 181  Q
    ||||||||||| |||||||||||    
T  11327437 tttgtagaatcgatataggaaat 11327459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 181
Target Start/End: Original strand, 17543505 - 17543627
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||||||||| |||| |||||||||| || ||| |||||||||||||||       |||||||  ||||||||| ||||||||||||||||  |||    
T  17543505 aaggttgttaaaattgggactttacttcaggtcgaaaaggaatagcaaaatcgggactcataaaatcgaaatcaaaatcgaaggattttactcaaggact 17543604  T
Q  159 tttgtagaatctatataggaaat 181  Q
    ||||||||||| |||| ||||||    
T  17543605 tttgtagaatcgatattggaaat 17543627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 249
Target Start/End: Original strand, 26053074 - 26053268
Alignment:
Q  69 gttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaat-------cgtaaaatctcaatcaaaattgaaggattttactcaactactttt 161  Q
    ||||| |||||| ||| |||||||||| || ||||| |||||||||||       ||||||||| |||||||||| ||| ||||||||||||  ||||||    
T  26053074 gttgtcaaaatcaggactttacttcaggtcgaaaggaaatagcaaaattgggactcgtaaaatcccaatcaaaatcgaatgattttactcaatgactttt 26053173  T
Q  162 gtagaatctatataggaaatgataaa--------caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    |||||||| |||| ||||||  ||||        ||||||||||||||| |||||||| || | |||| |||| | ||||||||||||||||||||    
T  26053174 gtagaatcgatattggaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaa-aataataatactaactatatgttataaatggtatata 26053268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 249
Target Start/End: Original strand, 26073127 - 26073321
Alignment:
Q  69 gttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaat-------cgtaaaatctcaatcaaaattgaaggattttactcaactactttt 161  Q
    ||||| |||||| ||| |||||||||| || ||||| |||||||||||       ||||||||| |||||||||| ||| ||||||||||||  ||||||    
T  26073127 gttgtcaaaatcaggactttacttcaggtcgaaaggaaatagcaaaattgggactcgtaaaatcccaatcaaaatcgaatgattttactcaatgactttt 26073226  T
Q  162 gtagaatctatataggaaatgataaa--------caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    |||||||| |||| ||||||  ||||        ||||||||||||||| |||||||| || | |||| |||| | ||||||||||||||||||||    
T  26073227 gtagaatcgatattggaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaa-aataataatactaactatatgttataaatggtatata 26073321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 65 - 227
Target Start/End: Original strand, 3573673 - 3573851
Alignment:
Q  65 aaaggttgttaaaatcgggattttacttcagatc-aaaagggaatagcaaaa-------tcgtaaaatctcaatcaaaattgaaggattttactcaacta 156  Q
    ||||||||| |||||||||| |||||||||| || |||||||||||||||||       |||||||||| |||||||||| | |||| ||||||||||||    
T  3573673 aaaggttgtcaaaatcgggactttacttcaggtcgaaaagggaatagcaaaatcaggactcgtaaaatcgcaatcaaaatcgtaggaatttactcaacta 3573772  T
Q  157 cttttgtagaatctatataggaaatgataaa--------caaaatcgatggattctaccaaaacaaaagtaatgctaaa 227  Q
    || |||||||||  ||||| |||||  ||||        |||||||||||  || ||||||||||||| ||||||||||    
T  3573773 ctcttgtagaatagatataagaaattgtaaaatcgcaatcaaaatcgatgagttttaccaaaacaaaaataatgctaaa 3573851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 181
Target Start/End: Complemental strand, 17103556 - 17103427
Alignment:
Q  59 tccaacaaaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatc-------gtaaaatctcaatcaaaattgaaggattttactc 151  Q
    |||||| |||||||| |||||||||| |||||||||  || |||||||||| |||||||       |||||||| ||||||| |  ||||||||||||||    
T  17103556 tccaaccaaggttgtcaaaatcgggactttacttcaagtcgaaagggaataacaaaatcaggactcgtaaaatcgcaatcaataccgaaggattttactc 17103457  T
Q  152 aactacttttgtagaatctatataggaaat 181  Q
    ||  |||||||||||||| |||||||||||    
T  17103456 aaggacttttgtagaatcgatataggaaat 17103427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 114 - 249
Target Start/End: Complemental strand, 23898109 - 23897968
Alignment:
Q  114 aatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattcta 205  Q
    ||||||||||||  || |||||| |||||||||||||||||||| ||||||||||| ||||| |||||  ||||        ||||||||||||||| ||    
T  23898109 aatcgtaaaatcgaaaccaaaatcgaaggattttactcaactac-tttgtagaatcgatataagaaattgtaaaatctcaatcaaaatcgatggatttta 23898011  T
Q  206 ccaaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    |||||| ||||  ||| |||||| ||||||||||||||||||||    
T  23898010 ccaaaa-aaaaaaaatactaaatatatgttataaatggtatata 23897968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 177
Target Start/End: Original strand, 20432421 - 20432486
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatatagg 177  Q
    |||||||||||||| ||||||||||||||| |||||||| ||||| |||||||||||| |||||||    
T  20432421 aaaatcgtaaaatcgcaatcaaaattgaagaattttacttaactagttttgtagaatcgatatagg 20432486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 2912091 - 2912145
Alignment:
Q  114 aatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaat 168  Q
    ||||||||||||  |||| ||||||||||||||||||||||||||||||||||||    
T  2912091 aatcgtaaaatcataatcgaaattgaaggattttactcaactacttttgtagaat 2912145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 27890683 - 27890621
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatatagga 178  Q
    ||||||||||  ||||||||||||||||||||||||||  |||||||||||||| ||||||||    
T  27890683 tcgtaaaatcgtaatcaaaattgaaggattttactcaaggacttttgtagaatcgatatagga 27890621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 15527946 - 15528007
Alignment:
Q  120 aaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    |||||| |||||||||| ||||||||||||||||  |||||||||||||| |||||||||||    
T  15527946 aaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataggaaat 15528007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 250
Target Start/End: Original strand, 27233074 - 27233272
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| ||||||| |  |||||||||| ||||||||||||  ||||||||       ||||||| |||||||||||||||||||||||||||   ||    
T  27233074 aaggttgtcaaaatcgagcctttacttcaggtcaaaagggaatgacaaaatcgggactcataaaatcgcaatcaaaattgaaggattttactcaaggtct 27233173  T
Q  159 tttgtagaatctatataggaaatgataaa--------caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatataa 250  Q
    || ||||||||  ||||| ||||  ||||        |||||||||| |||| ||||| || || | |||| |||||| |||||||||||||||||||||    
T  27233174 ttagtagaatcgctatagaaaattgtaaaatcgcaatcaaaatcgatagattttaccataa-aacaataatactaaatatatgttataaatggtatataa 27233272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 1179126 - 1179068
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaat-tgaaggattttactcaactacttttgtagaatc 169  Q
    |||||| |||| || |||||||||| |||||||||||||||||||||||||||||||||    
T  1179126 aaaatcctaaagtcgcaatcaaaatctgaaggattttactcaactacttttgtagaatc 1179068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 168
Target Start/End: Original strand, 7621749 - 7621859
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcgtaaaatctcaa--------tcaaaattgaaggattttactcaactac 157  Q
    |||||||| || |||| ||||||||||  |||| |||||||||| |||||||| ||||||  ||        |||||||||||| |||||||||||||||    
T  7621749 aaggttgtcaagatcgagattttacttacgatcgaaagggaataacaaaatcgaaaaatcataaaactgttatcaaaattgaagaattttactcaactac 7621848  T
Q  158 ttttgtagaat 168  Q
    |||||||||||    
T  7621849 ttttgtagaat 7621859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 18490551 - 18490612
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    |||||| |||||||||||||||| ||||| ||||| ||||| |||||||||||| |||||||    
T  18490551 caaaattgatggattctaccaaatcaaaaataatgataaatatatgttataaatcgtatata 18490612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 20399998 - 20400051
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    |||||||||||||||| |||||||||||| ||||| ||||| ||||||||||||    
T  20399998 caaaatcgatggattccaccaaaacaaaaataatgataaatatatgttataaat 20400051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 4596681 - 4596747
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatatagga 178  Q
    ||||| |||||||  ||||||||||||||||||| ||||||| ||||||| ||||||  ||||||||    
T  4596681 aaaattgtaaaattgcaatcaaaattgaaggattctactcaattacttttctagaattgatatagga 4596747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 177
Target Start/End: Original strand, 20399902 - 20399967
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatatagg 177  Q
    ||||| |||||||| |||| |||||||||| |||||||||||||  |||||||||||  |||||||    
T  20399902 aaaattgtaaaatcacaataaaaattgaagaattttactcaacttgttttgtagaattgatatagg 20399967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 27614488 - 27614553
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    |||||||||| |||||||||| ||||||||||||||||  ||||  |||||| | |||||||||||    
T  27614488 tcgtaaaatcacaatcaaaatcgaaggattttactcaatgacttgagtagaaacaatataggaaat 27614553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 27890579 - 27890538
Alignment:
Q  200 attctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||||||||||| ||||||||||| ||||||||||||    
T  27890579 attctaccaaaacaaaaataatgctaaatatatgttataaat 27890538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 33592930 - 33593044
Alignment:
Q  70 ttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaat-------cgtaaaatctcaatcaaaattgaaggattttactcaactacttttg 162  Q
    |||| |||||||||||||| ||||| ||| |||||||||| ||||||       ||||||||  ||||| |||| ||| ||||| |||||||||||||||    
T  33592930 ttgtcaaaatcgggattttgcttcatatcgaaagggaataacaaaattgaaaatcgtaaaattgcaatcgaaatcgaatgattt-actcaactacttttg 33593028  T
Q  163 tagaatctatatagga 178  Q
    ||||||  ||||||||    
T  33593029 tagaattgatatagga 33593044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 33593075 - 33593128
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    |||||||||||||||||||||||| |||| ||||| ||||  ||||||||||||    
T  33593075 caaaatcgatggattctaccaaaagaaaaataatgttaaacatatgttataaat 33593128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 169
Target Start/End: Complemental strand, 20981458 - 20981363
Alignment:
Q  73 ttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatc 169  Q
    |||||||||||| ||| ||| || |  ||||| ||||||||||||  ||||||  |||||||||  ||| ||||||||||||| |||||||||||||    
T  20981458 ttaaaatcgggacttttctttaggtttaaaggaaatagcaaaatcc-aaaatcgtaatcaaaatcaaagaattttactcaactgcttttgtagaatc 20981363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 241
Target Start/End: Original strand, 5422582 - 5422624
Alignment:
Q  199 gattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    |||| ||||||||||||| ||||||||||| ||||||||||||    
T  5422582 gattttaccaaaacaaaaataatgctaaatatatgttataaat 5422624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 4594748 - 4594793
Alignment:
Q  73 ttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg 118  Q
    |||||||||||||||| ||||||||| ||||| || ||||||||||    
T  4594748 ttaaaatcgggattttgcttcagatcgaaaggtaagagcaaaatcg 4594793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 20432518 - 20432570
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    |||||||||||||||| |||||||||||| |||| || ||| ||||||||||||    
T  20432518 caaaatcgatggattccaccaaaacaaaaataatact-aatatatgttataaat 20432570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 31108359 - 31108307
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||| |||||||| |||||||||||||| |||||||  |||||||||||    
T  31108359 caaaatcga-ggattctaacaaaacaaaagtaaagctaaatacatgttataaat 31108307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 31407501 - 31407460
Alignment:
Q  200 attctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||||||||||| ||||| ||||| ||||||||||||    
T  31407501 attctaccaaaacaaaaataatgttaaatatatgttataaat 31407460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 28669594 - 28669538
Alignment:
Q  122 aatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatatagga 178  Q
    |||| |||| |||| |||||||||||||| ||||| |||||||||||| || |||||    
T  28669594 aatcgcaataaaaaatgaaggattttacttaactatttttgtagaatcgatgtagga 28669538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 62 - 169
Target Start/End: Original strand, 48441 - 48547
Alignment:
Q  62 aacaaaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcgtaaaatctcaatcaaaattgaaggattttactcaactactttt 161  Q
    |||||||||||| |||||||||||||| |||||| || ||||| || || ||| |  |||||||||||||||||| ||||||||||||| ||||||||||    
T  48441 aacaaaggttgtcaaaatcgggattttgcttcagttctaaaggaaaaagtaaa-tattaaaatctcaatcaaaatcgaaggattttacttaactactttt 48539  T
Q  162 gtagaatc 169  Q
    ||||||||    
T  48540 gtagaatc 48547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 181
Target Start/End: Original strand, 61086 - 61211
Alignment:
Q  63 acaaaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaa-------tcgtaaaatctcaatcaaaattgaaggattttactcaact 155  Q
    ||||||||||  |||||||||||||| |||||| ||||||| ||| || ||||       |||||||||| |||||||||| |||| |||||||| ||||    
T  61086 acaaaggttgccaaaatcgggattttgcttcaggtcaaaagagaaaagtaaaatttaaaatcgtaaaatcacaatcaaaatcgaagaattttacttaact 61185  T
Q  156 acttttgtagaatctatataggaaat 181  Q
    |||||||||||||| ||||| |||||    
T  61186 acttttgtagaatcgatatatgaaat 61211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 118 - 249
Target Start/End: Complemental strand, 42697143 - 42697004
Alignment:
Q  118 gtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattctaccaa 209  Q
    |||||||| |||  ||||||||||||||||| |||||||||||||||||||| ||||| ||||| |||||        ||||||||||||||| ||||||    
T  42697143 gtaaaatcgcaactaaaattgaaggattttattcaactacttttgtagaatcgatataagaaatcataaactcgcaatcaaaatcgatggattttaccaa 42697044  T
Q  210 aacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    || ||||  ||| | |||| ||||||||||||||||||||    
T  42697043 aaaaaaaaaaataccaaatatatgttataaatggtatata 42697004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 65 - 181
Target Start/End: Original strand, 10872489 - 10872612
Alignment:
Q  65 aaaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactac 157  Q
    ||||||||| |||||| |||||||||||||| ||||||||||| || ||||||        ||||||| |||||||||||||||||||||||| ||||||    
T  10872489 aaaggttgtcaaaatcaggattttacttcaggtcaaaagggaagagaaaaatcaaaaatcataaaatcgcaatcaaaattgaaggattttactaaactac 10872588  T
Q  158 ttttgtagaatctatataggaaat 181  Q
    ||||| |||||| ||||| |||||    
T  10872589 ttttgaagaatcgatataagaaat 10872612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 241
Target Start/End: Complemental strand, 27676787 - 27676600
Alignment:
Q  69 gttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactactttt 161  Q
    |||||||||||| ||||||| |||||  || |||||||| ||||||||||       ||||||| |||||||||| ||| ||||||||||||||||||||    
T  27676787 gttgttaaaatcaggattttgcttcaagtcgaaagggaagagcaaaatcgaaaatcttaaaatcgcaatcaaaatcgaaagattttactcaactactttt 27676688  T
Q  162 gtagaatctatataggaaatgataaa--------caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||| |||| ||||| |||||  ||||        ||||||| ||||||| |||||||||||||  |||| ||||| ||||||||||||    
T  27676687 gtaaaatcgatataagaaatcgtaaaatcacaatcaaaatcaatggattttaccaaaacaaaaacaatgttaaatatatgttataaat 27676600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 181
Target Start/End: Complemental strand, 17064606 - 17064539
Alignment:
Q  114 aatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||| |||||    
T  17064606 aatcgtaaaatcgcaatcaaaatcgaaggattttactcaactacttttgtagaatcaatataagaaat 17064539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 181
Target Start/End: Original strand, 24619972 - 24620094
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| |||||||| | |||||||||  |||||||||||||||||||| |       ||||||| |||||||||| ||||||||||||||||  |||    
T  24619972 aaggttgtcaaaatcggaactttacttcaagtcaaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaagact 24620071  T
Q  159 tttgtagaatctatataggaaat 181  Q
    ||||||||||| |||||| ||||    
T  24620072 tttgtagaatcgatatagaaaat 24620094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 236
Target Start/End: Original strand, 6136397 - 6136529
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattc 203  Q
    |||||||||||||| ||||||||||  || |||||||||||||||||||| ||||||| ||||| |||||  ||||        |||||||||||||||     
T  6136397 aaaatcgtaaaatcgcaatcaaaatcaaaagattttactcaactacttttatagaatcgatataagaaatcgtaaaatcacaatcaaaatcgatggattt 6136496  T
Q  204 taccaaaacaaaagtaatgctaaatgtatgtta 236  Q
    ||||||||||||| |||| |||| | |||||||    
T  6136497 taccaaaacaaaaataatactaactatatgtta 6136529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 250
Target Start/End: Original strand, 25870152 - 25870295
Alignment:
Q  114 aatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattcta 205  Q
    |||||||||||| ||| ||||||  ||||||||||||||||||  ||||||||||| ||||| |||||  ||||        ||||||||||||||| ||    
T  25870152 aatcgtaaaatcgcaaccaaaatcaaaggattttactcaactaagtttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggatttta 25870251  T
Q  206 ccaaaacaaaagtaatgctaaatgtatgttataaatggtatataa 250  Q
    |||||| || | |||| |||||| |||||||||||||||||||||    
T  25870252 ccaaaa-aacaataatactaaatatatgttataaatggtatataa 25870295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 249
Target Start/End: Complemental strand, 28746130 - 28745933
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| ||||| |||| |||||||||| || ||||  |||||||||||||       ||||||| |||||||||| |||| |||||||||||  |||    
T  28746130 aaggttgtcaaaattgggactttacttcaggtcgaaagaaaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaagaattttactcaagaact 28746031  T
Q  159 tttgtagaatctatataggaaatgataaa--------caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    ||||||||||| |||||||||||  ||||        ||||||||||||||| |||| ||| |||| ||||  ||||| |||||||||||| |||||||    
T  28746030 tttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccaaa-aaaattaatagtaaatatatgttataaatagtatata 28745933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 8592174 - 8592293
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    ||||||||  ||||||||| |||||||||  || ||||| |||||||||||||       ||||||| |||||||||| ||||||||||||||||  |||    
T  8592174 aaggttgtcgaaatcgggactttacttcaagtcgaaaggaaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggact 8592273  T
Q  159 tttgtagaatctatatagga 178  Q
    ||||||||||| ||||||||    
T  8592274 tttgtagaatcgatatagga 8592293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 166
Target Start/End: Complemental strand, 41671533 - 41671426
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| |||||||||||||| |||||| || |||| ||| ||||||||||       ||||||| ||| |||||| |||||||||||||||||||||    
T  41671533 aaggttgtcaaaatcgggattttgcttcaggtcgaaagagaagagcaaaatcgataattgtaaaatcgcaaccaaaatcgaaggattttactcaactact 41671434  T
Q  159 tttgtaga 166  Q
    ||||||||    
T  41671433 tttgtaga 41671426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 236
Target Start/End: Complemental strand, 13286241 - 13286113
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattctacc 207  Q
    |||||||||| ||||||||||  || |||||||||||||||||||||||||||| ||||| |||||  ||||         |||||||||||||| ||||    
T  13286241 tcgtaaaatcgcaatcaaaatcaaaagattttactcaactacttttgtagaatcgatataagaaatcgtaaaatcacaatgaaaatcgatggattttacc 13286142  T
Q  208 aaaacaaaagtaatgctaaatgtatgtta 236  Q
    ||||||||| |||| |||| | |||||||    
T  13286141 aaaacaaaaataatactaactatatgtta 13286113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 20756319 - 20756254
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    |||||||||| |||||||||||||| ||||||||||||  | |||||||||||| |||||||||||    
T  20756319 tcgtaaaatcgcaatcaaaattgaaagattttactcaaggatttttgtagaatcgatataggaaat 20756254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 145
Target Start/End: Original strand, 6860985 - 6861065
Alignment:
Q  65 aaaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcgtaaaatctcaatcaaaattgaaggatt 145  Q
    ||||||||| ||||| |||||||| |||||| || ||||||||||| |||||| ||||||| |||||||||| || |||||    
T  6860985 aaaggttgtcaaaattgggattttgcttcaggtcgaaagggaatagtaaaatcataaaatcgcaatcaaaatcgatggatt 6861065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 181
Target Start/End: Complemental strand, 28136061 - 28135994
Alignment:
Q  114 aatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    |||||||||||| | |||||||| ||||||||||||||||||||||||||| |||  ||||| |||||    
T  28136061 aatcgtaaaatcgctatcaaaatcgaaggattttactcaactacttttgtaaaattgatataagaaat 28135994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 3449140 - 3449206
Alignment:
Q  114 aatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaa 180  Q
    |||||||||||| ||| |||||| ||| ||||||| |||||||||||||||||||| ||||| ||||    
T  3449140 aatcgtaaaatcgcaaccaaaatcgaatgattttattcaactacttttgtagaatcgatataagaaa 3449206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 241
Target Start/End: Original strand, 15806302 - 15806348
Alignment:
Q  195 gatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||    
T  15806302 gatggattctaccaaaacaaaaataatgctaaatatatgttataaat 15806348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 3041568 - 3041469
Alignment:
Q  75 aaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactacttttgtagaa 167  Q
    ||||||||||||||||||||  || ||| ||| |||||||||||       ||||||| |||||||||| ||||||||||||||||  ||||||||||||    
T  3041568 aaaatcgggattttacttcaagtcgaaatggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaa 3041469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 6861051 - 6861104
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||||||||||||||||||||||| ||| ||||| | ||||||||||||    
T  6861051 caaaatcgatggattctaccaaaacaaaaataaagctaactatatgttataaat 6861104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 8560232 - 8560351
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||| | |||||||||| |||||||||  |||||||||| |||||||||||       | ||||| |||||||||| ||||||||||||||||    |    
T  8560232 aaggttatcaaaatcgggactttacttcaagtcaaaagggagtagcaaaatcgagactcgtgaaatcgcaatcaaaatcgaaggattttactcaaggttt 8560331  T
Q  159 tttgtagaatctatatagga 178  Q
    ||||||||||| ||||||||    
T  8560332 tttgtagaatcaatatagga 8560351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 17796866 - 17796809
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatc 169  Q
    |||||||||||||  |||| ||||| |||| |||||||||||||||||||||||||||    
T  17796866 aaaatcgtaaaattgcaattaaaatcgaagcattttactcaactacttttgtagaatc 17796809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 19105306 - 19105249
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatc 169  Q
    |||||||||||||  |||| ||||| |||| |||||||||||||||||||||||||||    
T  19105306 aaaatcgtaaaattgcaattaaaatcgaagcattttactcaactacttttgtagaatc 19105249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 250
Target Start/End: Complemental strand, 10591840 - 10591788
Alignment:
Q  198 ggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatataa 250  Q
    ||||||||||||||||||| ||||||||||| |||||||||||| | ||||||    
T  10591840 ggattctaccaaaacaaaaataatgctaaatatatgttataaattgcatataa 10591788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 22971106 - 22971054
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaat 168  Q
    |||||||||| |||||||||| ||||||||||||||||  |||||||||||||    
T  22971106 tcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaat 22971054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 181
Target Start/End: Complemental strand, 22137572 - 22137509
Alignment:
Q  118 gtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    |||||||| ||| ||||||  ||| ||||||||||||||||||||||||||| ||||| |||||    
T  22137572 gtaaaatcacaaccaaaatcaaagaattttactcaactacttttgtagaatcgatataagaaat 22137509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 168
Target Start/End: Complemental strand, 29067630 - 29067522
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||||| |||||||| | |||||||||| || || ||||||||||||||||       ||||||||||||| |||| ||||||||||||||||  | |    
T  29067630 aaggttgtcaaaatcggaactttacttcaggtcgaatgggaatagcaaaatcggaactcataaaatctcaatc-aaatcgaaggattttactcaaggatt 29067532  T
Q  159 tttgtagaat 168  Q
    ||||||||||    
T  29067531 tttgtagaat 29067522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 9169877 - 9169825
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||| ||||||||||||||||||| ||||| ||||| ||||||||||||    
T  9169877 caaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgttataaat 9169825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 18014195 - 18014143
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||| |||||||| |||||||||| ||||||||||| ||||||||||||    
T  18014195 caaaatcga-ggattctatcaaaacaaaaataatgctaaatatatgttataaat 18014143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 198 - 241
Target Start/End: Original strand, 8592333 - 8592376
Alignment:
Q  198 ggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||||||||||||| ||||| ||||| ||||||||||||    
T  8592333 ggattctaccaaaacaaaaataatgataaatatatgttataaat 8592376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 181
Target Start/End: Complemental strand, 21963726 - 21963663
Alignment:
Q  118 gtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    |||||||| ||| ||||||| ||| ||||||||||| ||||||| ||||||| ||||| |||||    
T  21963726 gtaaaatcacaaccaaaattaaagaattttactcaattacttttatagaatcgatataagaaat 21963663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 181
Target Start/End: Complemental strand, 21986162 - 21986099
Alignment:
Q  118 gtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    |||||||| ||| ||||||| ||| ||||||||||| ||||||| ||||||| ||||| |||||    
T  21986162 gtaaaatcacaaccaaaattaaagaattttactcaattacttttatagaatcgatataagaaat 21986099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 249
Target Start/End: Complemental strand, 39428183 - 39428059
Alignment:
Q  133 aaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattctaccaaaacaaaagtaatgct 224  Q
    |||| ||||||||||||||||  | |||||| ||||| |||||||||||  ||||        ||||||||||||||| |||| ||| |||| |||| ||    
T  39428183 aaatcgaaggattttactcaaagatttttgtggaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccaaaaaaaattaatact 39428084  T
Q  225 aaatgtatgttataaatggtatata 249  Q
    |||| |||||||||| | |||||||    
T  39428083 aaatatatgttataagtagtatata 39428059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 18014288 - 18014226
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatatagga 178  Q
    |||||||||| |||||||||| ||||||||||||||||  |||||| || || | ||||||||    
T  18014288 tcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttataaaaccgatatagga 18014226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 24649524 - 24649574
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaat 116  Q
    |||||||| ||||| |||| |||||||||| || |||||||||||||||||    
T  24649524 aaggttgtcaaaattgggactttacttcaggtcgaaagggaatagcaaaat 24649574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 3041426 - 3041374
Alignment:
Q  189 aaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatg 242  Q
    |||||||| ||||||||||||||||||| ||||| ||||| |||| ||||||||    
T  3041426 aaaatcga-ggattctaccaaaacaaaaataatgttaaatatatgctataaatg 3041374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 8560382 - 8560433
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||||| |||||||||||| |||| ||||||||||| ||||||||||||    
T  8560382 caaaatcgatg-attctaccaaaataaaa-taatgctaaatatatgttataaat 8560433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 149
Target Start/End: Complemental strand, 13006126 - 13006089
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttac 149  Q
    |||||||||||||| |||||||||||||| ||||||||    
T  13006126 aaaatcgtaaaatcgcaatcaaaattgaatgattttac 13006089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 19348757 - 19348705
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||| ||||| ||||||||||||| ||||| ||||| ||||||||||||    
T  19348757 caaaatcga-ggattataccaaaacaaaaataatgttaaatatatgttataaat 19348705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 22971013 - 22970961
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||| ||||||||||||||||||| ||||| || || ||||||||||||    
T  22971013 caaaatcga-ggattctaccaaaacaaaaataatgttatatatatgttataaat 22970961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 178
Target Start/End: Complemental strand, 27090742 - 27090677
Alignment:
Q  113 aaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatatagga 178  Q
    ||||||||| ||| |||| ||||| ||||||||||||||||  | ||||||| |||| ||||||||    
T  27090742 aaatcgtaagatcgcaataaaaatcgaaggattttactcaaggaattttgtataatcgatatagga 27090677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 22355971 - 22356030
Alignment:
Q  185 aaacaaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggta 245  Q
    |||||||||||||||||| |||||||| || | ||||  ||||| ||||||||||||||||    
T  22355971 aaacaaaatcgatggattttaccaaaa-aataataataataaatatatgttataaatggta 22356030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 249
Target Start/End: Original strand, 8787 - 8932
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaatgataaa--------caaaatcgatggattc 203  Q
    |||||| |||||||  ||||||||| |||||||||||||||||||||||||||||||  ||||| ||| |  ||||        |||||||||||||||     
T  8787 aaaatcataaaatcgtaatcaaaatcgaaggattttactcaactacttttgtagaatagatataagaacttgtaaaatcgcaatcaaaatcgatggattt 8886  T
Q  204 taccaaaacaaaagtaatgctaaatgtatgttataaatggtatata 249  Q
    ||||||||||||  ||||||||||| |||||||||| | |||||||    
T  8887 taccaaaacaaagataatgctaaatatatgttataagttgtatata 8932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0534 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 167
Target Start/End: Complemental strand, 1024 - 916
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaat-------cgtaaaatctcaatcaaaattgaaggattttactcaactact 158  Q
    |||||| |||||||| ||||||| |||||| ||||||||||| ||||||||       ||||||||  |||||||||| |||| ||||||||||||||||    
T  1024 aaggtttttaaaatcaggattttgcttcaggtcaaaagggaagagcaaaattgaaaatcgtaaaattgcaatcaaaatcgaagaattttactcaactact 925  T
Q  159 tttgtagaa 167  Q
    |||||||||    
T  924 tttgtagaa 916  T

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Target: scaffold0028 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 175
Target Start/End: Complemental strand, 145889 - 145826
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatata 175  Q
    |||||||||||||  |||||||||| |||||||||||||||  ||||||||||||||| |||||    
T  145889 aaaatcgtaaaatagcaatcaaaatcgaaggattttactcacttacttttgtagaatcgatata 145826  T

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Target: scaffold0042 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 175
Target Start/End: Original strand, 93534 - 93596
Alignment:
Q  113 aaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatata 175  Q
    |||| ||||||||  ||||||||| ||||||||||| |||||||||||||||||||| |||||    
T  93534 aaattgtaaaatcgtaatcaaaatcgaaggattttattcaactacttttgtagaatcgatata 93596  T

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Target: scaffold0510 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 181
Target Start/End: Original strand, 34 - 100
Alignment:
Q  114 aatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    ||||||||||||  || |||||| |||||||||||||||||||| ||||||||||| ||||| |||||    
T  34 aatcgtaaaatcgaaaccaaaatcgaaggattttactcaactac-tttgtagaatcgatataagaaat 100  T

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Target: scaffold0417 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 181
Target Start/End: Original strand, 7289 - 7352
Alignment:
Q  118 gtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatataggaaat 181  Q
    ||||||||  ||||||||| |||||||||||||||| ||||||||| ||||  |||||||||||    
T  7289 gtaaaatcgtaatcaaaatcgaaggattttactcaagtacttttgttgaatagatataggaaat 7352  T

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Target: scaffold0150 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 175
Target Start/End: Complemental strand, 33239 - 33176
Alignment:
Q  112 aaaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatata 175  Q
    ||||| |||||||| |||||||||| |||| ||||||||||  ||||||||||||||| |||||    
T  33239 aaaattgtaaaatcgcaatcaaaatcgaagaattttactcacttacttttgtagaatcgatata 33176  T

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Target: scaffold0259 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 18601 - 18539
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaatggtatataa 250  Q
    |||||| ||||||||||| |||||||||| |||| |||||| |||||||||||| | ||||||    
T  18601 caaaatagatggattctatcaaaacaaaaataatactaaatatatgttataaattgcatataa 18539  T

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Target: scaffold0079 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 14758 - 14820
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatatagga 178  Q
    |||||||||| |||||||||| ||||||||||| ||||  |||||||||||||| || |||||    
T  14758 tcgtaaaatcgcaatcaaaatcgaaggattttattcaaagacttttgtagaatcgatgtagga 14820  T

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Target: scaffold0027 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 132947 - 133009
Alignment:
Q  116 tcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatatagga 178  Q
    |||||||||| |||||||||| |||||||||| |||||  |||||||||||||| || |||||    
T  132947 tcgtaaaatcgcaatcaaaatcgaaggattttcctcaaggacttttgtagaatcgatgtagga 133009  T

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Target: scaffold1178 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1178
Description:

Target: scaffold1178; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 539 - 487
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||| ||||||||||||||||||| ||||||||||| |||| |||||||    
T  539 caaaatcga-ggattctaccaaaacaaaaataatgctaaatatatgatataaat 487  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 178
Target Start/End: Complemental strand, 142929 - 142864
Alignment:
Q  113 aaatcgtaaaatctcaatcaaaattgaaggattttactcaactacttttgtagaatctatatagga 178  Q
    ||||| ||||||| |||| ||||||||||||||||||||||  | |||||||||||  ||||||||    
T  142929 aaatcctaaaatcgcaattaaaattgaaggattttactcaaggagttttgtagaatagatatagga 142864  T

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Target: scaffold0684 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 5137 - 5189
Alignment:
Q  188 caaaatcgatggattctaccaaaacaaaagtaatgctaaatgtatgttataaat 241  Q
    ||||||||| |||||||||||||  |||| ||||||||||| ||||||||||||    
T  5137 caaaatcga-ggattctaccaaatgaaaaataatgctaaatatatgttataaat 5189  T

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Target: scaffold2084 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold2084
Description:

Target: scaffold2084; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 182 - 130
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg 118  Q
    |||||| | |||||||||| |||||||||  |||||||||| |||||||||||    
T  182 aaggttatcaaaatcgggactttacttcaagtcaaaagggagtagcaaaatcg 130  T

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Target: scaffold0017 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 38302 - 38354
Alignment:
Q  66 aaggttgttaaaatcgggattttacttcagatcaaaagggaatagcaaaatcg 118  Q
    |||||||| |||||||||| |||||||||  || ||||| |||||||||||||    
T  38302 aaggttgtcaaaatcgggactttacttcaagtcgaaaggaaatagcaaaatcg 38354  T

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