View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15204_low_23 (Length: 305)
Name: NF15204_low_23
Description: NF15204
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15204_low_23 |
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Alignment Details
Target: chr6 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 2 - 188
Target Start/End: Original strand, 20577595 - 20577781
Alignment:
| Q |
2 |
aaacgttataaaataaataaaccaaataaacaacgaattaatttttagattatcattttctcatcaatttagtatttaaatgtttaacattaactaaaaa |
101 |
Q |
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| T |
20577595 |
aaacgttataaaataaataaaccaaataaacaatgaattaatttttagattatcattttctcatcaatttagtatttaaatgtttaacattaactaaaaa |
20577694 |
T |
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| Q |
102 |
attaataaattatattttcatccatcaatttgtcccatcggttaatcctcttcccctagggataaattgattaacaaaaatattcaa |
188 |
Q |
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| T |
20577695 |
attaataaattatattttcatccatcaatttgttccatcggttaatcctcttcccctagggataaattgattaacaaaaatattcaa |
20577781 |
T |
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