View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15205_high_11 (Length: 558)

Name: NF15205_high_11
Description: NF15205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15205_high_11
NF15205_high_11
[»] chr1 (28 HSPs)
chr1 (1-539)||(12177155-12177681)
chr1 (224-394)||(26977720-26977890)
chr1 (215-407)||(22414746-22414938)
chr1 (249-378)||(16050399-16050528)
chr1 (249-400)||(34273092-34273242)
chr1 (250-411)||(52565586-52565745)
chr1 (217-409)||(4601413-4601605)
chr1 (249-334)||(5671775-5671860)
chr1 (249-436)||(23728719-23728906)
chr1 (210-336)||(16030361-16030487)
chr1 (198-408)||(25408050-25408260)
chr1 (215-341)||(33101501-33101627)
chr1 (1-84)||(12177120-12177203)
chr1 (210-411)||(14254966-14255155)
chr1 (225-364)||(1659760-1659899)
chr1 (268-413)||(23280185-23280327)
chr1 (199-342)||(5459702-5459844)
chr1 (224-409)||(21098772-21098956)
chr1 (249-407)||(3590832-3590990)
chr1 (224-318)||(16299591-16299685)
chr1 (254-343)||(2140940-2141025)
chr1 (202-409)||(21682516-21682723)
chr1 (199-342)||(18246098-18246240)
chr1 (198-409)||(48637504-48637704)
chr1 (268-361)||(2612638-2612730)
chr1 (287-336)||(12032251-12032300)
chr1 (197-329)||(43344450-43344580)
chr1 (52-122)||(11993227-11993298)
[»] chr3 (30 HSPs)
chr3 (205-526)||(1770786-1771106)
chr3 (213-456)||(431195-431438)
chr3 (249-456)||(17143627-17143835)
chr3 (250-436)||(12516191-12516377)
chr3 (217-362)||(9801057-9801201)
chr3 (253-411)||(30606937-30607095)
chr3 (249-372)||(16704407-16704530)
chr3 (239-452)||(12731444-12731657)
chr3 (204-456)||(17485505-17485755)
chr3 (250-455)||(25495945-25496149)
chr3 (249-436)||(14859998-14860185)
chr3 (246-371)||(28715451-28715572)
chr3 (247-451)||(7835458-7835662)
chr3 (197-385)||(28723724-28723912)
chr3 (268-363)||(21342259-21342354)
chr3 (215-411)||(12108390-12108586)
chr3 (202-436)||(20622364-20622600)
chr3 (202-345)||(2311824-2311967)
chr3 (256-433)||(13932956-13933136)
chr3 (249-345)||(8122905-8123000)
chr3 (249-336)||(6109652-6109739)
chr3 (268-335)||(13085073-13085140)
chr3 (253-322)||(12251997-12252066)
chr3 (327-407)||(20122707-20122787)
chr3 (210-302)||(21649379-21649471)
chr3 (327-409)||(20118903-20118985)
chr3 (265-322)||(9781519-9781576)
chr3 (249-291)||(17396740-17396782)
chr3 (39-94)||(42530816-42530871)
chr3 (4-65)||(42530811-42530871)
[»] chr7 (27 HSPs)
chr7 (203-456)||(9135240-9135493)
chr7 (198-450)||(16986977-16987229)
chr7 (205-436)||(13292022-13292253)
chr7 (215-396)||(12644756-12644938)
chr7 (249-445)||(5863192-5863389)
chr7 (249-451)||(26762794-26762997)
chr7 (224-358)||(7486525-7486659)
chr7 (251-337)||(9867937-9868023)
chr7 (215-329)||(21161213-21161326)
chr7 (249-409)||(43171962-43172113)
chr7 (268-369)||(29373470-29373571)
chr7 (249-405)||(5925405-5925561)
chr7 (268-409)||(39879411-39879553)
chr7 (250-362)||(34854249-34854361)
chr7 (268-367)||(10287564-10287663)
chr7 (249-322)||(5929024-5929097)
chr7 (304-413)||(12265047-12265156)
chr7 (293-362)||(16204340-16204409)
chr7 (224-409)||(18773961-18774146)
chr7 (290-443)||(16203768-16203922)
chr7 (239-406)||(1979057-1979224)
chr7 (261-407)||(20034333-20034478)
chr7 (36-94)||(44338572-44338630)
chr7 (372-409)||(23629173-23629210)
chr7 (33-74)||(44338651-44338692)
chr7 (239-302)||(9573459-9573522)
chr7 (1-62)||(44338570-44338630)
[»] chr8 (36 HSPs)
chr8 (203-413)||(21416697-21416907)
chr8 (239-430)||(3459390-3459580)
chr8 (253-449)||(18322952-18323149)
chr8 (246-362)||(30477643-30477759)
chr8 (268-411)||(26916822-26916965)
chr8 (251-341)||(6928084-6928174)
chr8 (246-365)||(24507459-24507578)
chr8 (251-411)||(17698209-17698369)
chr8 (250-411)||(5859821-5859982)
chr8 (279-436)||(11776142-11776299)
chr8 (268-408)||(13754782-13754921)
chr8 (246-345)||(17927694-17927793)
chr8 (199-309)||(23269201-23269311)
chr8 (239-409)||(24576509-24576679)
chr8 (224-405)||(4565323-4565504)
chr8 (258-337)||(24070866-24070946)
chr8 (302-450)||(17319521-17319665)
chr8 (249-384)||(15058040-15058175)
chr8 (269-324)||(13765014-13765069)
chr8 (338-397)||(16214721-16214780)
chr8 (36-94)||(20242249-20242307)
chr8 (36-94)||(20250853-20250911)
chr8 (304-362)||(23497136-23497194)
chr8 (276-309)||(7220553-7220586)
chr8 (305-410)||(20055625-20055729)
chr8 (33-74)||(20242328-20242369)
chr8 (33-74)||(20250791-20250832)
chr8 (36-119)||(16579348-16579429)
chr8 (299-330)||(7220617-7220648)
chr8 (36-85)||(16584092-16584139)
chr8 (279-385)||(23243819-23243925)
chr8 (1-62)||(20242247-20242307)
chr8 (1-62)||(20250853-20250913)
chr8 (239-291)||(14666883-14666935)
chr8 (269-297)||(17319657-17319685)
chr8 (369-453)||(24070952-24071036)
[»] chr2 (30 HSPs)
chr2 (202-446)||(3586321-3586566)
chr2 (215-361)||(36267469-36267615)
chr2 (249-444)||(20120352-20120547)
chr2 (249-445)||(15825159-15825355)
chr2 (249-444)||(10923056-10923251)
chr2 (251-430)||(24499796-24499973)
chr2 (210-436)||(18135837-18136063)
chr2 (246-409)||(29711020-29711181)
chr2 (249-436)||(15390484-15390671)
chr2 (252-436)||(19050334-19050518)
chr2 (239-397)||(24157244-24157402)
chr2 (210-363)||(45258124-45258277)
chr2 (269-345)||(12168998-12169074)
chr2 (249-360)||(12127638-12127749)
chr2 (271-362)||(19919039-19919130)
chr2 (236-342)||(27846512-27846618)
chr2 (249-343)||(45715000-45715094)
chr2 (249-445)||(18772257-18772450)
chr2 (239-322)||(18770307-18770392)
chr2 (244-343)||(24755468-24755567)
chr2 (369-456)||(30638662-30638749)
chr2 (198-309)||(30638517-30638628)
chr2 (251-448)||(29137908-29138106)
chr2 (327-408)||(19290550-19290631)
chr2 (255-362)||(23257793-23257899)
chr2 (331-409)||(24318999-24319077)
chr2 (275-342)||(18134349-18134418)
chr2 (249-335)||(36022466-36022551)
chr2 (6-71)||(38583930-38583993)
chr2 (4-74)||(32290746-32290817)
[»] scaffold0291 (2 HSPs)
scaffold0291 (250-456)||(15309-15515)
scaffold0291 (203-408)||(8508-8708)
[»] chr4 (22 HSPs)
chr4 (202-456)||(19643660-19643914)
chr4 (215-407)||(12683756-12683948)
chr4 (253-441)||(2674467-2674652)
chr4 (253-408)||(47253286-47253440)
chr4 (249-436)||(15742053-15742239)
chr4 (250-409)||(5518546-5518705)
chr4 (250-455)||(29157108-29157314)
chr4 (249-410)||(15514486-15514647)
chr4 (249-409)||(14601941-14602101)
chr4 (253-341)||(19809710-19809798)
chr4 (249-436)||(16012371-16012557)
chr4 (249-409)||(1638244-1638404)
chr4 (352-456)||(17746036-17746140)
chr4 (251-329)||(10981873-10981950)
chr4 (249-409)||(18463805-18463965)
chr4 (251-326)||(14003073-14003148)
chr4 (251-409)||(25066151-25066309)
chr4 (253-341)||(19818702-19818790)
chr4 (249-299)||(13171084-13171134)
chr4 (4-122)||(24225601-24225718)
chr4 (215-298)||(3981921-3982002)
chr4 (224-291)||(17110678-17110745)
[»] chr6 (45 HSPs)
chr6 (254-441)||(11087512-11087700)
chr6 (269-413)||(16130993-16131137)
chr6 (251-411)||(18147313-18147473)
chr6 (268-536)||(33596885-33597155)
chr6 (249-434)||(9403177-9403362)
chr6 (224-362)||(19305444-19305582)
chr6 (249-442)||(22572050-22572243)
chr6 (210-393)||(19730533-19730715)
chr6 (250-408)||(30680998-30681156)
chr6 (249-410)||(12449508-12449669)
chr6 (224-391)||(20148297-20148462)
chr6 (224-391)||(22184366-22184531)
chr6 (265-409)||(27860874-27861018)
chr6 (240-436)||(31295434-31295630)
chr6 (269-436)||(34064220-34064387)
chr6 (265-342)||(3404855-3404932)
chr6 (239-408)||(12424241-12424410)
chr6 (251-456)||(18566664-18566869)
chr6 (276-409)||(19277003-19277135)
chr6 (278-453)||(31423719-31423894)
chr6 (268-407)||(689786-689924)
chr6 (239-365)||(15480311-15480437)
chr6 (239-328)||(14080479-14080567)
chr6 (270-379)||(17380123-17380232)
chr6 (250-343)||(34187305-34187397)
chr6 (239-411)||(16343574-16343746)
chr6 (250-410)||(22497223-22497383)
chr6 (225-343)||(9292012-9292129)
chr6 (268-361)||(10115659-10115752)
chr6 (269-345)||(4251034-4251110)
chr6 (253-328)||(14268440-14268515)
chr6 (259-362)||(34572967-34573070)
chr6 (250-343)||(9277293-9277385)
chr6 (253-436)||(13823279-13823459)
chr6 (216-320)||(19331695-19331799)
chr6 (249-328)||(25008398-25008476)
chr6 (290-342)||(12203631-12203683)
chr6 (327-409)||(14184482-14184564)
chr6 (327-409)||(18994062-18994144)
chr6 (1-74)||(22860764-22860838)
chr6 (246-361)||(12487970-12488085)
chr6 (254-384)||(23768203-23768333)
chr6 (316-362)||(27772538-27772584)
chr6 (1-61)||(9291168-9291228)
chr6 (246-362)||(17703704-17703819)
[»] chr5 (24 HSPs)
chr5 (249-452)||(32418368-32418572)
chr5 (254-451)||(25333745-25333944)
chr5 (250-411)||(26994530-26994691)
chr5 (198-411)||(25537359-25537572)
chr5 (253-360)||(22903102-22903209)
chr5 (250-408)||(27083166-27083322)
chr5 (251-436)||(22865768-22865953)
chr5 (327-456)||(31202254-31202383)
chr5 (239-367)||(24647283-24647411)
chr5 (273-411)||(20025312-20025449)
chr5 (249-410)||(25828913-25829074)
chr5 (250-409)||(18799786-18799944)
chr5 (249-436)||(24546352-24546534)
chr5 (205-296)||(31202467-31202558)
chr5 (249-343)||(8938917-8939010)
chr5 (254-318)||(19993182-19993246)
chr5 (330-409)||(25679172-25679251)
chr5 (269-341)||(34493542-34493610)
chr5 (39-94)||(11335324-11335379)
chr5 (254-300)||(19846079-19846125)
chr5 (246-300)||(26163637-26163691)
chr5 (36-82)||(27314808-27314854)
chr5 (330-399)||(21213329-21213398)
chr5 (4-72)||(11335324-11335391)
[»] scaffold0360 (1 HSPs)
scaffold0360 (247-411)||(13925-14089)
[»] scaffold0294 (1 HSPs)
scaffold0294 (252-411)||(166-326)
[»] scaffold0140 (1 HSPs)
scaffold0140 (249-409)||(6303-6463)
[»] scaffold0205 (2 HSPs)
scaffold0205 (249-433)||(22891-23075)
scaffold0205 (249-384)||(10866-11001)
[»] scaffold0002 (2 HSPs)
scaffold0002 (202-436)||(379674-379908)
scaffold0002 (224-367)||(120979-121122)
[»] scaffold0023 (1 HSPs)
scaffold0023 (249-411)||(95734-95896)
[»] scaffold0054 (1 HSPs)
scaffold0054 (250-409)||(68728-68885)
[»] scaffold0380 (1 HSPs)
scaffold0380 (249-413)||(6782-6946)
[»] scaffold0005 (1 HSPs)
scaffold0005 (249-409)||(215277-215437)
[»] scaffold0103 (1 HSPs)
scaffold0103 (249-407)||(40801-40959)
[»] scaffold0057 (1 HSPs)
scaffold0057 (253-429)||(73708-73884)
[»] scaffold0074 (2 HSPs)
scaffold0074 (202-336)||(35211-35346)
scaffold0074 (333-409)||(53199-53275)
[»] scaffold0464 (1 HSPs)
scaffold0464 (239-451)||(11511-11719)
[»] scaffold0505 (1 HSPs)
scaffold0505 (204-328)||(7845-7969)
[»] scaffold0263 (1 HSPs)
scaffold0263 (222-408)||(20424-20610)
[»] scaffold0479 (1 HSPs)
scaffold0479 (250-452)||(5049-5246)
[»] scaffold0101 (1 HSPs)
scaffold0101 (215-449)||(10620-10838)
[»] scaffold0013 (1 HSPs)
scaffold0013 (249-362)||(4397-4510)
[»] scaffold0092 (1 HSPs)
scaffold0092 (249-361)||(21592-21704)
[»] scaffold0174 (2 HSPs)
scaffold0174 (253-327)||(29286-29358)
scaffold0174 (322-373)||(24819-24870)
[»] scaffold0096 (1 HSPs)
scaffold0096 (305-409)||(42309-42413)
[»] scaffold0126 (1 HSPs)
scaffold0126 (287-342)||(31818-31873)
[»] scaffold0034 (1 HSPs)
scaffold0034 (254-364)||(18442-18551)
[»] scaffold0543 (1 HSPs)
scaffold0543 (327-408)||(4875-4956)
[»] scaffold0492 (1 HSPs)
scaffold0492 (327-408)||(6421-6502)


Alignment Details
Target: chr1 (Bit Score: 353; Significance: 0; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 1 - 539
Target Start/End: Original strand, 12177155 - 12177681
Alignment:
Q  1 aagtgcaatcaatcagaagaataaaattaggagat-aagtgcaatcaatcataagaatcaaaagggagagaagtgaaatcaatcaagagaatcaatagct 99  Q
    ||||||||||||||| |||||| |||  |||| |  ||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||    
T  12177155 aagtgcaatcaatcataagaatcaaa--aggaaaagaagtgcaatcaatcagaataatcaaaagggggagaagtgaaatcaatcaagagaatcaatagct 12177252  T
Q  100 agaaatgcaatcaattagaagaacaaaataatcttcccggtgagaacggatgagtggcaatagtggcaggtaatgatttggtgaggcgagataaggggtt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||    ||||||| ||||||| ||   |||||| ||    
T  12177253 agaaatgcaatcaattagaagaacaaaataatcttcccggtgagaacggatgagtgg------tgga---taatgatctggtgagacgg--taagggttt 12177341  T
Q  200 ctggtacggaggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgt 299  Q
    ||||||||  |||||||||| |||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12177342 ctggtacgacggcgttgagtaatcgcggtggaacgaaaggtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgt 12177441  T
Q  300 gtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcg 399  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||     
T  12177442 gtagaaagtgttgtgaaaagtgaattataccttgaggaggaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgagttatgcggca 12177541  T
Q  400 tttgattagggatgatggaggacacgtgtagggtgatgctcgtgcgggggcgcgcttgcctgcatcacagtgcacttgatctggcatgttctctcaggca 499  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||     
T  12177542 tttgattagggatggtggaggacacgtgtagggtgatgctcgtgcggggacgcgcttgcctgcatcacggtgcacttgatctggcatgttctgtcaggcg 12177641  T
Q  500 cagagctttaaggtggtgtaagttatgctacgtgtcagtg 539  Q
    |||||||||||||  ||||||||||||||| |||||||||    
T  12177642 cagagctttaaggcagtgtaagttatgctatgtgtcagtg 12177681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 224 - 394
Target Start/End: Original strand, 26977720 - 26977890
Alignment:
Q  224 gcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaa 323  Q
    ||||||||| | || |||||| || ||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||    
T  26977720 gcggtggaacgaaaggtgcctgcaggcacgttagcactccaacgctcaagtcagtaatggaaccgagaaagagtgtgtagaaagtattgtgaaaaatgaa 26977819  T
Q  324 tcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatg 394  Q
    ||||||||||||| |||||||| || | ||||||||||| ||||  |||| ||||| ||||| ||||||||    
T  26977820 tcataccttgagggtgaagcaatttgacccttatataggcgcgcgatgggaataaccgtctctgggttatg 26977890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 215 - 407
Target Start/End: Original strand, 22414746 - 22414938
Alignment:
Q  215 tgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtg 314  Q
    |||||| | ||||||||| | || |||||  || |||||||||||||| ||| ||||||||||||||| |||||| ||| ||||||||||||||||||||    
T  22414746 tgagtctttgcggtggaacgaaaggtgcccgcaggcacgttagcactctgacgctcaagtcagtaatgaaactgaaaaaaagtgtgtagaaagtgttgtg 22414845  T
Q  315 aaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgatta 407  Q
    |||||||||||||| ||||||| ||||||||||||| |||| ||||||   || | | ||||||| ||||||| |||||||||||| ||||||    
T  22414846 aaaagtgaatcatatcttgagggtgaagcaagttcatccttgtataggcatgcgtcgagcataacggtctccgtgttatgcggcgtatgatta 22414938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 249 - 378
Target Start/End: Original strand, 16050399 - 16050528
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    ||||||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||       
T  16050399 gcacgttagcactccaacgctcaagtcattgatggaactgagaaagagtgtgtagaaagtgtggtgaaaagtgaaccataccttgaggatgaagcaatgc 16050498  T
Q  349 caaccttatataggtgcgcattgggcataa 378  Q
    || |||||||||||||||||||||| ||||    
T  16050499 cacccttatataggtgcgcattgggaataa 16050528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 249 - 400
Target Start/End: Original strand, 34273092 - 34273242
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    ||||||||||||||| |  ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||  |    
T  34273092 gcacgttagcactccaatgctcaagtcagtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagggtgaagcaatgt 34273191  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgt 400  Q
    |  ||||||||||||| || ||||| ||||| | |||| |||| ||||||||    
T  34273192 cgcccttatataggtgtgc-ttgggaataaccgcctccaggttttgcggcgt 34273242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 250 - 411
Target Start/End: Original strand, 52565586 - 52565745
Alignment:
Q  250 cacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttc 349  Q
    ||||||||||||| ||| ||||||||||||| |||||||| |||||||| | ||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  52565586 cacgttagcactctgacgctcaagtcagtaaaggaactgaaaaagagtgcgcagaaagtgttgtgaaaagtgaatcataacttgagggtgaagcaagttc 52565685  T
Q  350 aaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattaggga 411  Q
    | |||||||| |  |||  |||| |||||  ||||||| ||||||| || | ||||||||||    
T  52565686 atccttatattg--gcgtgttggtcataatcgtctccgagttatgcagcatgtgattaggga 52565745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 217 - 409
Target Start/End: Complemental strand, 4601605 - 4601413
Alignment:
Q  217 agtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaa 316  Q
    |||| ||||||||||| | || ||| || || |||||||||||||||||| ||||||||||||||| |||||||||| | ||||||  ||||| ||||||    
T  4601605 agtcttcgcggtggaacgaaaggtgactgcaggcacgttagcactccgacgctcaagtcagtaatgaaactgagaaataatgtgtaataagtgctgtgaa 4601506  T
Q  317 aagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagg 409  Q
    |  |||    | |||||||| ||||||||||||| ||||||||| | ||||||||| |||| | |||||||||||||||| ||| ||||||||    
T  4601505 atttgatgtgtcccttgagggtgaagcaagttcacccttatatacgcgcgcattggtcatagccgtctccgggttatgcgccgtgtgattagg 4601413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 249 - 334
Target Start/End: Original strand, 5671775 - 5671860
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttga 334  Q
    ||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5671775 gcacgttagcactccaacgctcaagttagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcatacattga 5671860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 249 - 436
Target Start/End: Complemental strand, 23728906 - 23728719
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    ||||||||||| |  ||| ||||||||| |||||||| ||||||||||||||||  ||||||||||||||||||    |||||||||| |||| ||||||    
T  23728906 gcacgttagcattatgacgctcaagtcattaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagggtgaaacaagtt 23728807  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggtgat 436  Q
    || ||||||||||| || | |||| |||||| |||| |   ||||||||| | ||||||||||    | |||||||||||||||||||    
T  23728806 cacccttatataggcgcacgttggccataaccgtcttcaaattatgcggcatgtgattagggacagagcaggacacgtgtagggtgat 23728719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 210 - 336
Target Start/End: Original strand, 16030361 - 16030487
Alignment:
Q  210 ggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtg 309  Q
    |||| |||||| || |||||||||| || ||| || || |||||||| || ||  |  ||||||||||||||||||||||  ||||||||||||||||||    
T  16030361 ggcgatgagtcttcacggtggaatgaaaggtgtctgcaggcacgttatcagtcaaatgctcaagtcagtaatggaactgaataagagtgtgtagaaagtg 16030460  T
Q  310 ttgtgaaaagtgaatcataccttgagg 336  Q
    |||||||||||||||||||||||||||    
T  16030461 ttgtgaaaagtgaatcataccttgagg 16030487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 198 - 408
Target Start/End: Original strand, 25408050 - 25408260
Alignment:
Q  198 ttctggtacggaggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagt 297  Q
    ||||||||||| |||  ||||||   ||||||||||| || |||||| ||  |||||||||||||| |  ||||||||||||||| |||||| | |||||    
T  25408050 ttctggtacggcggcaatgagtctctgcggtggaatgaaaggtgcctgcagacacgttagcactccaatgctcaagtcagtaatgaaactgaaagagagt 25408149  T
Q  298 gtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcgg 397  Q
    |||||  ||||||||||||||||||    | |||||||| ||||||||||||| ||||  ||||| | |  |||  ||||||||||||||||||||  ||    
T  25408150 gtgtaagaagtgttgtgaaaagtgatgtgtcccttgagggtgaagcaagttcaccctttcataggcgtgttttgttcataactgtctccgggttataagg 25408249  T
Q  398 cgtttgattag 408  Q
    ||| |||||||    
T  25408250 cgtgtgattag 25408260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 215 - 341
Target Start/End: Complemental strand, 33101627 - 33101501
Alignment:
Q  215 tgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtg 314  Q
    |||||| |||| || ||||| || |||| | || ||||||||||||||| || |||||||| ||||||||||||||||| ||||||||||||||||||||    
T  33101627 tgagtcttcgctgtagaatgaaaggtgcatgcaggcacgttagcactccaacgctcaagtcggtaatggaactgagaaaaagtgtgtagaaagtgttgtg 33101528  T
Q  315 aaaagtgaatcataccttgaggatgaa 341  Q
    ||||||||| | || ||||||| ||||    
T  33101527 aaaagtgaaccgtaacttgagggtgaa 33101501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 12177120 - 12177203
Alignment:
Q  1 aagtgcaatcaatcagaagaataaaattaggagataagtgcaatcaatcataagaatcaaaagggagagaagtgaaatcaatca 84  Q
    |||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||| | ||||||| |||||||||    
T  12177120 aagtgcaatcaatcagaagaataaaatggggacataagtgcaatcaatcataagaatcaaaaggaaaagaagtgcaatcaatca 12177203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 210 - 411
Target Start/End: Complemental strand, 14255155 - 14254966
Alignment:
Q  210 ggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtg 309  Q
    |||| |||||| ||| ||||||| | |  |||||| || ||||| ||||||||| || ||||||||| ||||| |||||||||||||||||||  |||||    
T  14255155 ggcgatgagtcttcgtggtggaacgaagggtgcctgcaagcacgatagcactccaacgctcaagtcattaatgaaactgagaaagagtgtgtaagaagtg 14255056  T
Q  310 ttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagg 409  Q
    |||||            |||||||||| |||| |||||||| |||||||||||  ||| |||| ||||||| ||||| ||||||||||||| ||||||||    
T  14255055 ttgtg------------taccttgagggtgaaacaagttcacccttatataggcacgctttggtcataactttctccaggttatgcggcgtatgattagg 14254968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 225 - 364
Target Start/End: Complemental strand, 1659899 - 1659760
Alignment:
Q  225 cggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaat 324  Q
    |||||||| | || ||| |||||| ||||||| |||||| || ||||||||| ||||||| |||||||||| ||||||  ||||||||||||||||||      
T  1659899 cggtggaacgaaaggtgtctacatacacgttatcactccaacgctcaagtcaataatggatctgagaaagaatgtgtaagaagtgttgtgaaaagtgaga 1659800  T
Q  325 cataccttgaggatgaagcaagttcaaccttatataggtg 364  Q
     ||| |||| || || |||||||||| |||||||||||||    
T  1659799 aatatcttgtgggtggagcaagttcacccttatataggtg 1659760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 413
Target Start/End: Complemental strand, 23280327 - 23280185
Alignment:
Q  268 ctcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgc 367  Q
    ||||||||||||||||||||||||||| ||||||| |  |||||||||||||||||| || || ||||| ||||||||||||| | ||||||| ||||||    
T  23280327 ctcaagtcagtaatggaactgagaaagtgtgtgtata--gtgttgtgaaaagtgaataatgccatgagggtgaagcaagttcacctttatataagtgcgc 23280230  T
Q  368 attgggcataactgtctccgggttatgcggcgtttgattagggatg 413  Q
      || || |||| || |||||||| | | |||| ||||||||||||    
T  23280229 gctgagcttaaccgtttccgggtttttc-gcgtgtgattagggatg 23280185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 199 - 342
Target Start/End: Complemental strand, 5459844 - 5459702
Alignment:
Q  199 tctggtacggaggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtg 298  Q
    |||||||||| |||| |||||| ||| ||||| | | || |||| | || | ||||||||||||| ||  ||||  |||||| ||| |||||||||||||    
T  5459844 tctggtacggtggcgatgagtcttcgtggtgggacgaaaggtgcatgcaggtacgttagcactccaacgttcaaaacagtaacgga-ctgagaaagagtg 5459746  T
Q  299 tgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaag 342  Q
    |||||||||||||||| |||||||||||||| ||| ||||||||    
T  5459745 tgtagaaagtgttgtgtaaagtgaatcatacattggggatgaag 5459702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 224 - 409
Target Start/End: Complemental strand, 21098956 - 21098772
Alignment:
Q  224 gcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgaga-aagagtgtgtagaaagtgttgtgaaaagtga 322  Q
    ||||||||| | || ||| || || |||| |||||||||||||  ||||||||||||||||||||| | || ||| | || || ||||| |||||||||     
T  21098956 gcggtggaacgaaaggtggctgcaggcacattagcactccgacgatcaagtcagtaatggaactgatagaaaagtat-tataa-gtgttatgaaaagtgt 21098859  T
Q  323 atcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagg 409  Q
        |||||||||| ||||||||||||| ||||||||||||||||  | |||||||| ||||| | ||||||||| || ||||||||    
T  21098858 tgtgtaccttgagggtgaagcaagttcacccttatataggtgcgctcttggcataaccgtctctgagttatgcggtgtatgattagg 21098772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 407
Target Start/End: Original strand, 3590832 - 3590990
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgaga-aagagtgtgtagaaagtgttgtgaaaagtgaatcatacctt-gaggatgaagcaag 346  Q
    |||| |||||||||||||  ||||||||||||||||||||||| || ||| | ||| | | |||||||||||||     |||||| |||| |||||||||    
T  3590832 gcaccttagcactccgacgatcaagtcagtaatggaactgagagaaaagtct-tagga-gagttgtgaaaagtgttgtgtacctttgagggtgaagcaag 3590929  T
Q  347 ttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgatta 407  Q
    |||| ||||||||||| || |  | |||||||| |||||||||||||||||||| ||||||    
T  3590930 ttcacccttatataggcgcactcttggcataaccgtctccgggttatgcggcgtatgatta 3590990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 224 - 318
Target Start/End: Complemental strand, 16299685 - 16299591
Alignment:
Q  224 gcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaa 318  Q
    ||||||||| | || ||| || ||||||| |||||||||||||  |||||| ||||||| ||||||||||||||| |||  ||||||||||||||    
T  16299685 gcggtggaacgaaacgtgtctgcatgcacattagcactccgacgttcaagtaagtaatgaaactgagaaagagtgcgtaagaagtgttgtgaaaa 16299591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 254 - 343
Target Start/End: Complemental strand, 2141025 - 2140940
Alignment:
Q  254 ttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagc 343  Q
    |||||||||| || |||||||||||||| |||     ||||| |||||||||||||||||| |||||||| |||||||||||| ||||||    
T  2141025 ttagcactccaacgctcaagtcagtaattgaaa----aaagaatgtgtagaaagtgttgtggaaagtgaaccataccttgagggtgaagc 2140940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 202 - 409
Target Start/End: Complemental strand, 21682723 - 21682516
Alignment:
Q  202 ggtacggaggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaa-agagtgtg 300  Q
    ||||||| |||| ||||||   || |||||| | || ||||||| | | ||||| ||||||| || |||||||||||||||||||| |||| ||||||||    
T  21682723 ggtacggcggcgatgagtctctgctgtggaacgaaaggtgcctataggtacgtttgcactccaacgctcaagtcagtaatggaact-agaagagagtgtg 21682625  T
Q  301 tagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgt 400  Q
    ||  || | ||||||||||| |    |||||||||| ||| |||| |||| ||||||||||| | || |||  |||||  ||||| ||||||||| ||||    
T  21682624 taagaaatattgtgaaaagtaatgtgtaccttgagggtgacgcaaattcacccttatataggcgtgcgttgatcataatagtctctgggttatgctgcgt 21682525  T
Q  401 ttgattagg 409  Q
     ||||||||    
T  21682524 gtgattagg 21682516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 342
Target Start/End: Original strand, 18246098 - 18246240
Alignment:
Q  199 tctggtacggaggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtg 298  Q
    |||||||||| || | |||||| | ||||||||| | || ||| ||  | |||||||| |||||| || ||||||| |||| | ||| ||||||||||||    
T  18246098 tctggtacggtggtgatgagtcttggcggtggaacgaaaggtgtctgtaagcacgttaacactccaacgctcaagtgagtattagaattgagaaagagtg 18246197  T
Q  299 tgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaag 342  Q
    | || |||||| || ||||||||| ||||||||||||| |||||    
T  18246198 tataaaaagtg-tgagaaaagtgattcataccttgagggtgaag 18246240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 409
Target Start/End: Original strand, 48637504 - 48637704
Alignment:
Q  198 ttctggtacggaggcgttgagtcatc-gcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagag 296  Q
    |||||||| || |||| |||||| || ||||| ||| | || |||||| || |||||| ||||||| ||| |||||||||||||||||||||| | ||||    
T  48637504 ttctggtatggtggcgatgagtcttctgcggtagaacgaaaggtgcctgcaggcacgtcagcactctgacgctcaagtcagtaatggaactgaaagagag 48637603  T
Q  297 tgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcg 396  Q
      ||||  ||||||||||            |||||||||| |||| |||||||| ||||||||||| | ||    |||||||| ||||||| ||||||||    
T  48637604 gatgtaagaagtgttgtg------------taccttgagggtgaaacaagttcacccttatataggcgggctcgtggcataaccgtctccgtgttatgcg 48637691  T
Q  397 gcgtttgattagg 409  Q
    |||| ||||||||    
T  48637692 gcgtgtgattagg 48637704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 361
Target Start/End: Complemental strand, 2612730 - 2612638
Alignment:
Q  268 ctcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatatag 361  Q
    |||||||||||| |||||||||| ||||||||||| ||| ||  |  |||| |||||||||||||||||||||||| |  ||| ||||||||||    
T  2612730 ctcaagtcagtattggaactgaggaagagtgtgtaaaaaatg-cggaaaaaatgaatcataccttgaggatgaagctaactcacccttatatag 2612638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 287 - 336
Target Start/End: Complemental strand, 12032300 - 12032251
Alignment:
Q  287 tgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgagg 336  Q
    |||||||||||||||||||||||||||| ||| ||||||||| |||||||    
T  12032300 tgagaaagagtgtgtagaaagtgttgtgtaaaatgaatcataacttgagg 12032251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 329
Target Start/End: Complemental strand, 43344580 - 43344450
Alignment:
Q  197 gttctggtacggaggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagag 296  Q
    |||||||||||| |||| |||||| | ||||||| ||| || ||| || ||   ||||||||||||  || |||||||||||| || |||| ||||||||    
T  43344580 gttctggtacggtggcgatgagtctttgcggtgggatgaaaggtgtctgcagaaacgttagcactcgaacgctcaagtcagtattgaaact-agaaagag 43344482  T
Q  297 tgtgtagaaagtgttgtgaaaagtgaatcatac 329  Q
    |||||| ||||||  | ||||||||||||||||    
T  43344481 tgtgtaaaaagtg-ggggaaaagtgaatcatac 43344450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 122
Target Start/End: Complemental strand, 11993298 - 11993227
Alignment:
Q  52 aagaatcaaaagggag-agaagtgaaatcaatcaagagaatcaatagctagaaatgcaatcaattagaagaa 122  Q
    |||||||||||||| | |||||||||||||||||  |||||||||||  |||| | |||| |||||||||||    
T  11993298 aagaatcaaaaggggggagaagtgaaatcaatcagaagaatcaatagagagaagtccaattaattagaagaa 11993227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 6e-60; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 205 - 526
Target Start/End: Original strand, 1770786 - 1771106
Alignment:
Q  205 acggaggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtaga 304  Q
    |||||||| ||||||| | ||||||||| | || ||| || || ||| ||||| |||||||| ||||||| ||||||||||||||| |||||||||||||    
T  1770786 acggaggcattgagtctttgcggtggaaggaaaggtgtctgcaagcatgttagtactccgacgctcaagttagtaatggaactgaggaagagtgtgtaga 1770885  T
Q  305 aagtgttgtgaaaagtgaatcat--accttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgttt 402  Q
    ||||||||||||||||| |||||   |||||||||||||||||||||  |||||||||||||||| ||| ||||||| |||||||  ||||||||||| |    
T  1770886 aagtgttgtgaaaagtg-atcatgcgccttgaggatgaagcaagttcgcccttatataggtgcgcgttgtgcataaccgtctccgaattatgcggcgtat 1770984  T
Q  403 gattagggatgatggaggacacgtgtagggtgatgctcgtgcgggggcgcgcttgcctgcatcacagtgcacttgatctggcatgttctctcaggcacag 502  Q
    ||||||||| ||| ||||||||  ||| |||||| |||| |||||||||| |||   ||   |||||||||||||| ||| ||||||| ||||  | |||    
T  1770985 gattagggacgatagaggacac--gtaaggtgatcctcgcgcgggggcgcacttctatgtggcacagtgcacttgagctgacatgttcgctcaaacgcag 1771082  T
Q  503 agctttaaggtggtgtaagttatg 526  Q
    ||| |||||  |||||||||||||    
T  1771083 agcgttaagacggtgtaagttatg 1771106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 213 - 456
Target Start/End: Complemental strand, 431438 - 431195
Alignment:
Q  213 gttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttg 312  Q
    |||||||| ||||||||||| | || |||||||||  |||||||||||| |||| ||||||||| ||||||||||||||||||||| || ||||||| ||    
T  431438 gttgagtcttcgcggtggaaagaaaggtgcctacagacacgttagcacttcgacgctcaagtcaataatggaactgagaaagagtgcgtggaaagtgctg 431339  T
Q  313 tgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggat 412  Q
    ||||||||||||  | |||||||| ||||||| || || ||||||||||| |||  |||  ||||||||||| |||||||||| |||| |||||||||||    
T  431338 tgaaaagtgaattgtcccttgagggtgaagcatgtccacccttatataggcgcgtgttgctcataactgtctgcgggttatgcagcgtgtgattagggat 431239  T
Q  413 gatggaggacacgtgtagggtgatgctcgtgcgggggcgcgctt 456  Q
    |  |||||||||||||| |||||| ||| |||||||| ||||||    
T  431238 ggaggaggacacgtgtaaggtgatcctcatgcgggggagcgctt 431195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 249 - 456
Target Start/End: Complemental strand, 17143835 - 17143627
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||  |    
T  17143835 gcacgttagcactccgacgctcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgggggtgaaacaacat 17143736  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatga-tggaggacacgtgtagggtgatgctcgtgcggg 447  Q
    || ||||||||| | | ||||||   ||||||| || ||||||  ||||||| |||||||||| || | |||||||| ||||||| ||| ||| || |||    
T  17143735 cacccttatataagcgtgcattgaaaataactgccttcgggtttcgcggcgtgtgattagggacgactagaggacacatgtagggcgatcctcatgtggg 17143636  T
Q  448 ggcgcgctt 456  Q
    |||| ||||    
T  17143635 ggcgtgctt 17143627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 250 - 436
Target Start/End: Original strand, 12516191 - 12516377
Alignment:
Q  250 cacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttc 349  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||| ||||||  ||||||||||||||||||    |||||||||| ||||||||||||    
T  12516191 cacgttagcactccgacgctcaagttagtaatggaactgagaaagattgtgtaataagtgttgtgaaaagtgatatgtaccttgagggtgaagcaagttc 12516290  T
Q  350 aaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggtgat 436  Q
    | | ||||||||||| || |||| |||||| |||||||  ||||||| | | |||||||||| |  | |||||||||||||||||||    
T  12516291 acctttatataggtgtgccttggccataaccgtctccgccttatgcgacatgtgattagggacggagcaggacacgtgtagggtgat 12516377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 217 - 362
Target Start/End: Complemental strand, 9801201 - 9801057
Alignment:
Q  217 agtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaa 316  Q
    |||| |||| |||||| | || |||||| || ||||||||||||||  ||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  9801201 agtcttcgcagtggaacgaaaggtgcctgcaagcacgttagcactca-acactcaagtcagtaatagaacagagaaagagtgtgtagaaagtgttgtgaa 9801103  T
Q  317 aagtgaatcataccttgaggatgaagcaagttcaaccttatatagg 362  Q
    |||||||||||||||||||| ||||||||  ||| |||||||||||    
T  9801102 aagtgaatcataccttgagggtgaagcaatgtcacccttatatagg 9801057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 253 - 411
Target Start/End: Original strand, 30606937 - 30607095
Alignment:
Q  253 gttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaac 352  Q
    ||||||| ||| || |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||| |||  || |    
T  30606937 gttagcattccaacgctcaagtcagtaatggaattgagaaagagtgagtagaaagtgttgtgaaaagtgaattataccttgagggtgaagtaaggccacc 30607036  T
Q  353 cttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattaggga 411  Q
    |||||||||| |||| ||  | |||||||||||||||||  || |||| ||||||||||    
T  30607037 cttatataggcgcgcgttaagaataactgtctccgggtttcgccgcgtgtgattaggga 30607095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 249 - 372
Target Start/End: Original strand, 16704407 - 16704530
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    ||||||| ||| ||| || || ||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16704407 gcacgttggcattccaacgctgaagtcagtaatggagttgagaaagagagtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaagcaagtt 16704506  T
Q  349 caaccttatataggtgcgcattgg 372  Q
    || ||||||||||| |||| ||||    
T  16704507 cacccttatataggcgcgcgttgg 16704530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 239 - 452
Target Start/End: Complemental strand, 12731657 - 12731444
Alignment:
Q  239 gtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggat 338  Q
    |||||||||  || ||||| |||||||| |||| |||| |||||||||||||||||||||| ||  ||||||||||||||||||     ||||||||| |    
T  12731657 gtgcctacaaccatgttagtactccgacgctcacgtcattaatggaactgagaaagagtgtataagaagtgttgtgaaaagtgatgtgaaccttgagggt 12731558  T
Q  339 gaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggtgatgc 438  Q
    |||||||||||| ||||||||| ||| ||  ||| ||||||||||| ||||||||||||||| ||||| ||||    | ||||||| |||| |||||| |    
T  12731557 gaagcaagttcacccttatatatgtgtgcgctggtcataactgtcttcgggttatgcggcgtgtgatttgggacagagtaggacacatgtaaggtgattc 12731458  T
Q  439 tcgtgcgggggcgc 452  Q
    ||| ||| ||||||    
T  12731457 tcgcgcgagggcgc 12731444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 204 - 456
Target Start/End: Complemental strand, 17485755 - 17485505
Alignment:
Q  204 tacggaggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtag 303  Q
    |||||||  |||||||| ||||||||||| | || ||| ||    |||| ||||||| || || |||||||||||||||||| |||||| ||||||||||    
T  17485755 tacggagctgttgagtcttcgcggtggaacgaaaggtgtctgtgggcacattagcaccccaacgctcaagtcagtaatggaattgagaaggagtgtgtag 17485656  T
Q  304 aaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttg 403  Q
    | | ||||||| ||| |||||  |||||||||| ||||||||  |||  | | |||||| |||| |||| |||||  ||||||||||||||| |||| ||    
T  17485655 agaatgttgtgtaaaatgaatagtaccttgagggtgaagcaaaatca--cgtgtataggcgcgcgttggtcataatcgtctccgggttatgctgcgtgtg 17485558  T
Q  404 attagggatgatggaggacacgtgtagggtgatgctcgtgcgggggcgcgctt 456  Q
    ||||| || ||  || ||||||||||||| ||| ||||||| |||||||||||    
T  17485557 attagtgacgaaagatgacacgtgtagggcgatcctcgtgctggggcgcgctt 17485505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 250 - 455
Target Start/End: Original strand, 25495945 - 25496149
Alignment:
Q  250 cacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttc 349  Q
    ||||||||||||| ||| ||||||||||||||  |||||||||||||||||||  ||| ||||  ||||||||    |||||| | | ||||||||||||    
T  25495945 cacgttagcactctgac-ctcaagtcagtaatcaaactgagaaagagtgtgtaagaagagttgaaaaaagtgatgtgtaccttaaaggtgaagcaagttc 25496043  T
Q  350 aaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggtgatgctcgtgcggggg 449  Q
    | ||||||||||| || | |||  |||||| |||||||||||||||||||| |||||||| | | || ||||||||||| || |||| ||||  ||||||    
T  25496044 acccttatataggcgcacgttgatcataaccgtctccgggttatgcggcgtgtgattaggaacggtgtaggacacgtgttggatgatcctcgctcggggg 25496143  T
Q  450 cgcgct 455  Q
    ||||||    
T  25496144 cgcgct 25496149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 249 - 436
Target Start/End: Complemental strand, 14860185 - 14859998
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    |||| ||||||||| ||  ||||| |||||||||||||||||||| ||| ||||  ||||||||||||||||||    |||||||||| |||||||||||    
T  14860185 gcacattagcactctgattctcaactcagtaatggaactgagaaacagtttgtaagaagtgttgtgaaaagtgatgtgtaccttgagggtgaagcaagtt 14860086  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggtgat 436  Q
    || ||||||||||| |||| |  | |||||| |||||| ||||||| ||||| ||||||||||    | |||||||||||| ||||||    
T  14860085 cacccttatataggcgcgcttaagtcataaccgtctccaggttatgaggcgtatgattagggacagagcaggacacgtgtatggtgat 14859998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 246 - 371
Target Start/End: Complemental strand, 28715572 - 28715451
Alignment:
Q  246 catgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaa 345  Q
    |||||||||||||||||| ||     ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||    
T  28715572 catgcacgttagcactccaac-----agtcagtaatggaactgagaaagagtgtgtataaagtgttgtgaaaagtgaatcataccttgagggtgaaacaa 28715478  T
Q  346 gttcaaccttat-ataggtgcgcattg 371  Q
      ||| |||||| |||| |||||||||    
T  28715477 tatcacccttataatagatgcgcattg 28715451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 247 - 451
Target Start/End: Complemental strand, 7835662 - 7835458
Alignment:
Q  247 atgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaag 346  Q
    |||||||||||| || |||||||  ||| ||| ||| |||||||||| ||| ||||||||||||||||||||||||  | || ||||| |||||||||||    
T  7835662 atgcacgttagctctacgacactagagttagtgatgaaactgagaaatagtatgtagaaagtgttgtgaaaagtgatacgtatcttgatgatgaagcaag 7835563  T
Q  347 ttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggtgatgctcgtgcgg 446  Q
    |||| |||| ||||||  | | |||  |||||| ||||| |||||||||| ||| |||| ||| | |  |||||||||||| |||| ||| |||| ||||    
T  7835562 ttcatccttttataggaacacgttgtccataaccgtctctgggttatgcgacgtgtgatcaggaacggaggaggacacgtgcagggcgatcctcgcgcgg 7835463  T
Q  447 gggcg 451  Q
    |||||    
T  7835462 gggcg 7835458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 197 - 385
Target Start/End: Complemental strand, 28723912 - 28723724
Alignment:
Q  197 gttctggtacggaggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagag 296  Q
    |||| ||||||| |||  |||||| ||||||||||| | || ||||  | | ||||||| ||| ||| || ||||||||| |||||||||| ||||||||    
T  28723912 gttccggtacggtggcaatgagtcttcgcggtggaacgaaatgtgctaataggcacgttggcaatccaacgctcaagtcactaatggaactaagaaagag 28723813  T
Q  297 tgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctc 385  Q
    |||||||||| |||||||||||||||||| || || |||| |||| |||  ||| ||||||||||| |||| ||| | |||||||||||    
T  28723812 tgtgtagaaaatgttgtgaaaagtgaatcgtatctggagggtgaaacaatgtcatccttatataggcgcgctttgagaataactgtctc 28723724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 268 - 363
Target Start/End: Complemental strand, 21342354 - 21342259
Alignment:
Q  268 ctcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggt 363  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||| ||||| ||| | | ||||||||||||    
T  21342354 ctcaagtcagtaatggaactgataaagagtgtatagaaagtgttgtgaaaagtgaatcatacattgagggtgaagtaaggttacccttatataggt 21342259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 215 - 411
Target Start/End: Original strand, 12108390 - 12108586
Alignment:
Q  215 tgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtg 314  Q
    |||||| ||| ||||||||| || |||| | |||||| |||| ||||||||| ||||||| |||||||||||||||||||| |||| |  || |||| ||    
T  12108390 tgagtcctcgtggtggaatgaaaggtgcatgcatgcatgttaccactccgacgctcaagttagtaatggaactgagaaagaatgtgaaataa-tgttctg 12108488  T
Q  315 aaaagtga-atcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattaggga 411  Q
     ||| ||| |   |||||||||| ||||||||||||| |||||||||||  ||| |||| |||||| | |||||||||||||||| | ||||||||||    
T  12108489 gaaaatgagaatgtaccttgagggtgaagcaagttcacccttatataggcacgcgttggtcataacggcctccgggttatgcggcttgtgattaggga 12108586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 202 - 436
Target Start/End: Original strand, 20622364 - 20622600
Alignment:
Q  202 ggtacggaggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgt 301  Q
    |||||||  |||||||||| |||| ||| || | || || ||| || ||| |||| ||||  ||| |||||||||||||||  |  |||||| |||||||    
T  20622364 ggtacggccgcgttgagtcttcgcagtgaaacgaaaggttcctgcaggcatgttaacactttgacgctcaagtcagtaatgagatagagaaatagtgtgt 20622463  T
Q  302 aga--aagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcg 399  Q
    |||  ||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||| |   |  ||||||||||| ||||  |||||||| | ||    
T  20622464 agataaagtggtgtgaaaagtgaatcataccttgagggtgaagcaagttcacccttatatatgcatgtgttgggcataaccgtctttgggttatgtgacg 20622563  T
Q  400 tttgattagggatgatggaggacacgtgtagggtgat 436  Q
    | |||||||    |||  |||||||||||||||||||    
T  20622564 tgtgattagaagcgataaaggacacgtgtagggtgat 20622600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 202 - 345
Target Start/End: Complemental strand, 2311967 - 2311824
Alignment:
Q  202 ggtacggaggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgt 301  Q
    ||||||| ||||  ||||| ||| ||||||||| || ||| || ||   ||||||||||||| || ||||| |||| || |||  ||||||||| |||||    
T  2311967 ggtacggtggcgaagagtcttcgtggtggaatgaaaggtgtctgcagatacgttagcactccaacgctcaaatcagcaagggatttgagaaagaatgtgt 2311868  T
Q  302 agaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaa 345  Q
    |||||||||||||||| |||||||||||||||||| ||||||||    
T  2311867 agaaagtgttgtgaaaggtgaatcataccttgagggtgaagcaa 2311824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 256 - 433
Target Start/End: Original strand, 13932956 - 13933136
Alignment:
Q  256 agcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcatacctt---gaggatgaagcaagttcaac 352  Q
    |||| ||| ||||||||||||||||| ||||||| |||  ||| || |||| |||||||||||||||||||||||||   |  || ||||||||||||      
T  13932956 agcagtccaacactcaagtcagtaattgaactgataaaatgtgggttgaaaatgttgtgaaaagtgaatcataccttaggggtgaagaagcaagttcact 13933055  T
Q  353 cttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggt 433  Q
    |||||||||  |||| ||   ||||||  |||| || ||||||||||| ||||||| |||||| || ||||| ||||||||    
T  13933056 cttatatagacgcgcgttcaacataaccatctctggattatgcggcgtgtgattagagatgatagatgacacttgtagggt 13933136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 249 - 345
Target Start/End: Complemental strand, 8123000 - 8122905
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaa 345  Q
    ||||||||||||||| || ||||||||||||||| || ||| ||| | | ||| ||||| |||||||||||||||||||||||||||| ||||||||    
T  8123000 gcacgttagcactccaacgctcaagtcagtaatgaaattgaaaaa-actatgtcgaaagcgttgtgaaaagtgaatcataccttgagggtgaagcaa 8122905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 249 - 336
Target Start/End: Complemental strand, 6109739 - 6109652
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgagg 336  Q
    ||||||||||||||| ||||| ||||||||||| ||||||| ||  | |||  ||||||||||||||||||||||||| | |||||||    
T  6109739 gcacgttagcactccaacacttaagtcagtaatcgaactgaaaacaaatgtaaagaaagtgttgtgaaaagtgaatcacatcttgagg 6109652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 13085140 - 13085073
Alignment:
Q  268 ctcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgag 335  Q
    ||||||||| ||||| |||||||||||| | |||||||||| ||||||||||||||||| ||||||||    
T  13085140 ctcaagtcaataatgaaactgagaaagaatatgtagaaagtattgtgaaaagtgaatcaaaccttgag 13085073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 12251997 - 12252066
Alignment:
Q  253 gttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtga 322  Q
    |||||||||| ||||||||||||||||| | || ||||||||||||||||  || |||||||||||||||    
T  12251997 gttagcactctgacactcaagtcagtaacgaaaatgagaaagagtgtgtaagaattgttgtgaaaagtga 12252066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 327 - 407
Target Start/End: Complemental strand, 20122787 - 20122707
Alignment:
Q  327 taccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgatta 407  Q
    |||||||||| ||||| ||||||| ||||||||||| |||| |  || ||||| |||||||||||||||||||| ||||||    
T  20122787 taccttgagggtgaagaaagttcacccttatataggcgcgcttatggaataaccgtctccgggttatgcggcgtatgatta 20122707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 210 - 302
Target Start/End: Original strand, 21649379 - 21649471
Alignment:
Q  210 ggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgta 302  Q
    |||| |||||| ||||||||||| | || |||||| || |||||||||||| || ||  ||||||||||||||||||||||| ||| ||||||    
T  21649379 ggcgatgagtcttcgcggtggaacgaaaggtgcctgcaagcacgttagcaccccaacgatcaagtcagtaatggaactgagagagaatgtgta 21649471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 327 - 409
Target Start/End: Complemental strand, 20118985 - 20118903
Alignment:
Q  327 taccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagg 409  Q
    |||||||||| ||||||||||||| ||||||||||| |||| |  |||||||| |||||  |||||| |||||| ||||||||    
T  20118985 taccttgagggtgaagcaagttcacccttatataggcgcgcttatggcataaccgtctctaggttattcggcgtatgattagg 20118903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 9781576 - 9781519
Alignment:
Q  265 acactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtga 322  Q
    |||||||| ||||||||| |||||| ||||||||||||  ||||||||||||||||||    
T  9781576 acactcaaatcagtaatgtaactgaaaaagagtgtgtaagaagtgttgtgaaaagtga 9781519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 291
Target Start/End: Original strand, 17396740 - 17396782
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgaga 291  Q
    ||||||||||||||||||| |||||||| ||||||||||||||    
T  17396740 gcacgttagcactccgacaatcaagtcaataatggaactgaga 17396782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 42530871 - 42530816
Alignment:
Q  39 tgcaatcaatcataagaatcaaaagggagagaagtgaaatcaatcaagagaatcaa 94  Q
    |||||||||||| ||||||||||||||  ||||||| |||||||||  ||||||||    
T  42530871 tgcaatcaatcagaagaatcaaaaggggaagaagtgcaatcaatcagaagaatcaa 42530816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 42530871 - 42530811
Alignment:
Q  4 tgcaatcaatcagaagaataaaattaggagataagtgcaatcaatcataagaatcaaaaggg 65  Q
    ||||||||||||||||||| |||   ||| | ||||||||||||||| ||||||||||||||    
T  42530871 tgcaatcaatcagaagaatcaaaagggga-agaagtgcaatcaatcagaagaatcaaaaggg 42530811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 1e-57; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 203 - 456
Target Start/End: Complemental strand, 9135493 - 9135240
Alignment:
Q  203 gtacggaggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgta 302  Q
    |||||| || ||| |||| || |||||||| | || |||| || | ||||||||||||||  || |||||||||||||||||| ||||||||||||||||    
T  9135493 gtacggcggtgttaagtcttcacggtggaacgaaaggtgcatataggcacgttagcactctaacgctcaagtcagtaatggaattgagaaagagtgtgta 9135394  T
Q  303 gaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgttt 402  Q
     ||| ||||||||||||||||||||||||||||| |||||||| |||| ||||||||||   || ||||| |||||| ||||||||||||||  |||| |    
T  9135393 aaaactgttgtgaaaagtgaatcataccttgagggtgaagcaaattcacccttatatagacacgtattggtcataaccgtctccgggttatgtagcgtgt 9135294  T
Q  403 gattagggatgatggaggacacgtgtagggtgatgctcgtgcgggggcgcgctt 456  Q
    ||||||||| |  ||||||||| |||| |||||| |||||||||||||||||||    
T  9135293 gattagggacggaggaggacacatgtaaggtgatcctcgtgcgggggcgcgctt 9135240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 198 - 450
Target Start/End: Complemental strand, 16987229 - 16986977
Alignment:
Q  198 ttctggtacggaggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagt 297  Q
    ||||||||||| |||  |||||| ||||||||||| | || |||| | |  |||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  16987229 ttctggtacggcggcaatgagtcttcgcggtggaacgaaaggtgcatgcgggcacgttagcactctgacactcaagccagtaatggaattgagaaagagt 16987130  T
Q  298 gtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcgg 397  Q
    |||||  ||||||||||||||||||    | |||| | | ||||||||||||| ||||||||||| |||| |||| |||||| |||||||| ||||||||    
T  16987129 gtgtaagaagtgttgtgaaaagtgatgtgtcccttaaaggtgaagcaagttcacccttatataggcgcgcgttggccataaccgtctccggattatgcgg 16987030  T
Q  398 cgtttgattagggatgatggaggacacgtgtagggtgatgctcgtgcgggggc 450  Q
     || ||||||||||||  | |||||||||| |||||||| || ||||| ||||    
T  16987029 tgtgtgattagggatggagcaggacacgtgcagggtgatccttgtgcgagggc 16986977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 205 - 436
Target Start/End: Complemental strand, 13292253 - 13292022
Alignment:
Q  205 acggaggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtaga 304  Q
    |||| |||| |||||| ||| ||||||| | || ||| || || | ||||||||||||  || ||||||||||||||| |||||| ||||||||||||      
T  13292253 acggcggcgatgagtcttcgtggtggaaggaaaggtgtctgcaggtacgttagcactctaacgctcaagtcagtaatgaaactgaaaaagagtgtgtaag 13292154  T
Q  305 aagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttga 404  Q
    ||||||||||||||||||    |||||||||| ||||||||||||| | ||||||||| |||| |||| |||||| |||||||||||||||||||| ||     
T  13292153 aagtgttgtgaaaagtgatgtgtaccttgagggtgaagcaagttcaccattatataggcgcgcgttggccataaccgtctccgggttatgcggcgtgtgg 13292054  T
Q  405 ttagggatgatggaggacacgtgtagggtgat 436  Q
    ||||||| |  | | |||||||||||||||||    
T  13292053 ttagggacggagcatgacacgtgtagggtgat 13292022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 215 - 396
Target Start/End: Original strand, 12644756 - 12644938
Alignment:
Q  215 tgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgtt-gt 313  Q
    |||||| || |||||||| | || |||| | || ||| |||||||||||||| |||| ||||||||||||||||||||| ||||||| ||||||||| ||    
T  12644756 tgagtcttcacggtggaacgaaaggtgcatgcaggcaagttagcactccgacgctcaggtcagtaatggaactgagaaaaagtgtgtggaaagtgttggt 12644855  T
Q  314 gaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcg 396  Q
    |||||||||||  ||| |||||| ||||||||||||| |||| || ||| |||| |||| |||||| |||| |||||||||||    
T  12644856 gaaaagtgaattgtacgttgagggtgaagcaagttcacccttgtagaggcgcgcgttggtcataaccgtcttcgggttatgcg 12644938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 249 - 445
Target Start/End: Original strand, 5863192 - 5863389
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    ||||||||||||||  || |||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||| || |||||  |    
T  5863192 gcacgttagcactcaaacgctcaagtcagtaatcgaactgagaaagagtgtgtagaaaatgttgtaaaaagtgaatcataccttgagggtggagcaatgt 5863291  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattaggga-tgatggaggacacgtgtagggtgatgctcgtgcg 445  Q
    || |||| |||||| |||| ||||  ||||| | |||||||||   |||| | ||||||||||  | | |||||||||||||  ||||| ||||||||    
T  5863292 cacccttgtataggcgcgcgttggaaataaccgcctccgggtttcacggcatgtgattagggacggttagaggacacgtgtaacgtgatcctcgtgcg 5863389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 249 - 451
Target Start/End: Complemental strand, 26762997 - 26762794
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    ||||||||||||||| || ||||||||||||| |||||| | ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||      
T  26762997 gcacgttagcactccaacgctcaagtcagtaaaggaactcataaatagtgtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaagcaagga 26762898  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattaggga-tgatggaggacacgtgtagggtgatgctcgtgcggg 447  Q
    || || |||||||| |||  |||   |||||   ||||||||| || ||||| ||||||||||  | | |||||||| |||| |||||| |||| || ||    
T  26762897 cacccatatataggcgcgtgttgttgataaccacctccgggttttggggcgtgtgattagggacggttagaggacacttgtatggtgatcctcgcgcagg 26762798  T
Q  448 ggcg 451  Q
    ||||    
T  26762797 ggcg 26762794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 224 - 358
Target Start/End: Original strand, 7486525 - 7486659
Alignment:
Q  224 gcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaa 323  Q
    ||||||||||| || |||| | || ||||||||||||||| || ||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  7486525 gcggtggaatgaaaggtgcatgcaggcacgttagcactccaacgctcaattcagtaatggaactgagaaagattgtgtagaaggtgttgtgaaaagtgaa 7486624  T
Q  324 tcataccttgaggatgaagcaagttcaaccttata 358  Q
    |||| |||| | | ||||| ||||||| |||||||    
T  7486625 tcatcccttaaaggtgaagaaagttcacccttata 7486659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 251 - 337
Target Start/End: Complemental strand, 9868023 - 9867937
Alignment:
Q  251 acgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgagga 337  Q
    |||||||||||| ||| ||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||    
T  9868023 acgttagcactctgacgctcaagtcagtaatggaactgaggaagagtttgtagaaagtgttgttaaaagtgaatcataccttgagga 9867937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 215 - 329
Target Start/End: Original strand, 21161213 - 21161326
Alignment:
Q  215 tgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtg 314  Q
    |||||| ||||||||||| | |||||| || || ||||||||||||||| || ||||||||||||||||| || |||||| |||||||||||||||||||    
T  21161213 tgagtcttcgcggtggaacg-aaagtgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagctaagaaagtgtgtgtagaaagtgttgtg 21161311  T
Q  315 aaaagtgaatcatac 329  Q
    |||||||||||||||    
T  21161312 aaaagtgaatcatac 21161326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 249 - 409
Target Start/End: Complemental strand, 43172113 - 43171962
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    ||||||||||||||| |  ||||||||| ||||||||||||||||| |         |||||||||||||||||||||||| |||||| |||||||| ||    
T  43172113 gcacgttagcactccaatgctcaagtcaataatggaactgagaaagtg---------agtgttgtgaaaagtgaatcatacattgagggtgaagcaactt 43172023  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagg 409  Q
    || ||||||||||| ||| |||| | ||||||| ||||||||| |||||| ||||||||||    
T  43172022 cacccttatataggcgcggattgagaataactgcctccgggttttgcggcatttgattagg 43171962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 268 - 369
Target Start/End: Original strand, 29373470 - 29373571
Alignment:
Q  268 ctcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgc 367  Q
    |||||||||||  || || |||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||  ||| ||| ||||||| ||||    
T  29373470 ctcaagtcagttgtgtaattgagaaagagtgtgtagaaaatgttgtgaaaattgaatcataccttgagggtgaagcaatgtcaccctcatataggcgcgc 29373569  T
Q  368 at 369  Q
    ||    
T  29373570 at 29373571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 249 - 405
Target Start/End: Complemental strand, 5925561 - 5925405
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    ||||||||||||||| ||  ||||||||||||||||||||||| |||  || ||  |||||| ||||||||||     | |||||||| |||||||||||    
T  5925561 gcacgttagcactccaacgatcaagtcagtaatggaactgagagagaaagtctaagaagtgtcgtgaaaagtgttgtgttccttgagggtgaagcaagtt 5925462  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgat 405  Q
    || |||||| |||| ||||    |||||||| |||||||||||||||||||| ||||    
T  5925461 cacccttatgtaggcgcgctcgtggcataaccgtctccgggttatgcggcgtgtgat 5925405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 268 - 409
Target Start/End: Original strand, 39879411 - 39879553
Alignment:
Q  268 ctcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttga-ggatgaagcaagttcaaccttatataggtgcg 366  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||| || ||| ||  |||||||  ||| ||||||||||  ||     
T  39879411 ctcaagtcagtaatgaaactgagaaagagtgtgtaaaaagtgttgtaaaaagtgaatcatgccatgaggggggaagcaatgtcacccttatatagacgca 39879510  T
Q  367 cattgggcataactgtctccgggttatgcggcgtttgattagg 409  Q
    ||||||  ||||| | |||||  || |||||||| ||||||||    
T  39879511 cattggaaataaccgcctccgaattttgcggcgtgtgattagg 39879553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 250 - 362
Target Start/End: Original strand, 34854249 - 34854361
Alignment:
Q  250 cacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttc 349  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||||||||||  || |||||||||||||||    |||  ||||| |||| |||||||    
T  34854249 cacgttagcactctgacgctcaagttagtaatgaaactgagaaagagtgtgtaagaaatgttgtgaaaagtgatgtgtactctgagggtgaaacaagttc 34854348  T
Q  350 aaccttatatagg 362  Q
    | |||||||||||    
T  34854349 acccttatatagg 34854361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 268 - 367
Target Start/End: Complemental strand, 10287663 - 10287564
Alignment:
Q  268 ctcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgc 367  Q
    ||||||||||||||||| |||||||| ||||||||  ||||||||||||||||||   ||||||||||| || | |||||| | ||||||||||| ||||    
T  10287663 ctcaagtcagtaatggatctgagaaaaagtgtgtaagaagtgttgtgaaaagtgagagataccttgagggtgtaacaagtttacccttatataggcgcgc 10287564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 249 - 322
Target Start/End: Complemental strand, 5929097 - 5929024
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtga 322  Q
    |||| |||||||||| ||||||||||||||||||||||||| | |||| |||||  ||||||||||||||||||    
T  5929097 gcacattagcactccaacactcaagtcagtaatggaactgaaagagagagtgtaagaagtgttgtgaaaagtga 5929024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 304 - 413
Target Start/End: Complemental strand, 12265156 - 12265047
Alignment:
Q  304 aaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttg 403  Q
    |||||||||||||||||||  | |||||||||| | ||||||||||| |||||||||||  |||     |||||||  ||||||||||||||||||| ||    
T  12265156 aaagtgttgtgaaaagtgatgcgtaccttgagggtcaagcaagttcacccttatataggcacgctcgaagcataaccatctccgggttatgcggcgtatg 12265057  T
Q  404 attagggatg 413  Q
    ||||||||||    
T  12265056 attagggatg 12265047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 362
Target Start/End: Original strand, 16204340 - 16204409
Alignment:
Q  293 agagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatatagg 362  Q
    |||||||||| |||||||||||||||||||| |||||||| ||| ||||| || |||| |||||||||||    
T  16204340 agagtgtgtataaagtgttgtgaaaagtgaaccataccttaagggtgaagaaaattcacccttatatagg 16204409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 224 - 409
Target Start/End: Original strand, 18773961 - 18774146
Alignment:
Q  224 gcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaa 323  Q
    ||||||||| | || |||| | || ||||||||||||| ||||  |||| |||||||||||||||||| |||  ||  |  |||||| ||||||||||      
T  18773961 gcggtggaacgaaaggtgcatgcaggcacgttagcacttcgacgatcaaatcagtaatggaactgagagagaaagtcaaagaagtgtagtgaaaagtgtt 18774060  T
Q  324 tcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagg 409  Q
       |||||||||| |||| ||| |||| ||||||||||  | ||  | |||||||| ||||||| |||||||||||| ||||||||    
T  18774061 gtgtaccttgagggtgaaacaaattcacccttatatagacgtgctcttggcataaccgtctccgagttatgcggcgtatgattagg 18774146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 290 - 443
Target Start/End: Original strand, 16203768 - 16203922
Alignment:
Q  290 gaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtg--cgcattgggcataactgtctccg 387  Q
    ||||||||||||| |||||||| ||||||||||| |||||||| ||| ||||| ||  ||| ||||||||||| |  ||| |||   ||||| |||||||    
T  16203768 gaaagagtgtgtataaagtgttatgaaaagtgaaccataccttaagggtgaagaaaagtcacccttatataggagctcgcgttg---ataaccgtctccg 16203864  T
Q  388 ggttatgcggcgtttgattaggga--tgatggaggacacgtgtagggtgatgctcgtg 443  Q
     |||  | ||||| ||||||||||   | | |||||||||||||||||||| ||||||    
T  16203865 tgtttcgtggcgtgtgattagggagcggttagaggacacgtgtagggtgatcctcgtg 16203922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 239 - 406
Target Start/End: Original strand, 1979057 - 1979224
Alignment:
Q  239 gtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggat 338  Q
    |||||| || ||||||||| |||| ||| |||||||||||||||||||||||| |||  || ||  |||||||||||| ||||     ||  ||| |  |    
T  1979057 gtgcctgcaagcacgttagtactctgacgctcaagtcagtaatggaactgagagagaaagtctaagaagtgttgtgaagagtgttgtgtatattgggagt 1979156  T
Q  339 gaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgatt 406  Q
    |||||||||||| | |||||||||  |||    |||||||| |||| ||||||||||||||| |||||    
T  1979157 gaagcaagttcacctttatataggcacgctcgtggcataaccgtctgcgggttatgcggcgtgtgatt 1979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 261 - 407
Target Start/End: Original strand, 20034333 - 20034478
Alignment:
Q  261 tccgacactcaagtcagtaatggaactgaga-aagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatat 359  Q
    ||||||| ||||||||||||||||||||||| || ||| | ||||| |||| ||||||||||     |||||||||| | |||||||| || ||||||||    
T  20034333 tccgacaatcaagtcagtaatggaactgagagaaaagttt-tagaa-gtgtagtgaaaagtgttgtgtaccttgagggtaaagcaagtacacccttatat 20034430  T
Q  360 aggtgcgcattgggcataactgtctccgggttatgcggcgtttgatta 407  Q
    |||  |||  | ||||| || |||||||||||||||||| | ||||||    
T  20034431 aggcccgctcttggcatgaccgtctccgggttatgcggcatatgatta 20034478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 44338630 - 44338572
Alignment:
Q  36 aagtgcaatcaatcataagaatcaaaagggagagaagtgaaatcaatcaagagaatcaa 94  Q
    ||||||||||||||| |||| ||||| |||||||||||| |||||||||  ||||||||    
T  44338630 aagtgcaatcaatcagaagagtcaaaggggagagaagtgcaatcaatcagaagaatcaa 44338572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 372 - 409
Target Start/End: Original strand, 23629173 - 23629210
Alignment:
Q  372 ggcataactgtctccgggttatgcggcgtttgattagg 409  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  23629173 ggcataactgtctccgggttatgcggcgtatgattagg 23629210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 44338692 - 44338651
Alignment:
Q  33 gataagtgcaatcaatcataagaatcaaaagggagagaagtg 74  Q
    |||||||||||||||||| |||||||||||||| ||||||||    
T  44338692 gataagtgcaatcaatcaaaagaatcaaaagggggagaagtg 44338651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 302
Target Start/End: Complemental strand, 9573522 - 9573459
Alignment:
Q  239 gtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgta 302  Q
    |||||| || ||||||||||||||| || | ||||||| ||  |||||||||||||||||||||    
T  9573522 gtgcctgcaggcacgttagcactccaacgcacaagtcaatatgggaactgagaaagagtgtgta 9573459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 44338630 - 44338570
Alignment:
Q  1 aagtgcaatcaatcagaagaataaaattaggagataagtgcaatcaatcataagaatcaaaa 62  Q
    |||||||||||||||||||| | |||   ||||| ||||||||||||||| |||||||||||    
T  44338630 aagtgcaatcaatcagaagagtcaaagg-ggagagaagtgcaatcaatcagaagaatcaaaa 44338570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 9e-56; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 203 - 413
Target Start/End: Original strand, 21416697 - 21416907
Alignment:
Q  203 gtacggaggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgta 302  Q
    |||||| ||||||||||  ||||| ||||   ||| ||| || ||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  21416697 gtacggcggcgttgagtattcgcgatggatctgaaggtgtctgcatgctcgttagcactccgacgctcaagtcagtaatgaaactgagaaagagtgtgta 21416796  T
Q  303 gaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgttt 402  Q
    |||||||||||||||| |||||| |||||| ||| ||||||||||||| |||| |||||| |||| ||||||||||| |||||||||||||||||| | |    
T  21416797 gaaagtgttgtgaaaaatgaatcgtaccttaagggtgaagcaagttcacccttgtataggggcgcgttgggcataaccgtctccgggttatgcggcctgt 21416896  T
Q  403 gattagggatg 413  Q
    ||||| |||||    
T  21416897 gattatggatg 21416907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 239 - 430
Target Start/End: Complemental strand, 3459580 - 3459390
Alignment:
Q  239 gtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgtt-gtgaaaagtgaatcataccttgagga 337  Q
    |||||| || |||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||| ||||||||||     
T  3459580 gtgcctgcaggcacgttagcactccggcgctcaagtcagtaatggaactgagcaagagtgtgtagaaagtgttggtgaaaagtaaatcgtaccttgagg- 3459482  T
Q  338 tgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtag 430  Q
    ||||||||||||| ||||||||||| |||  |||| | |||| ||||| |||||||||||||| |||||| ||| || ||||||||| |||||    
T  3459481 tgaagcaagttcacccttatataggcgcg-gttggtcgtaaccgtctctgggttatgcggcgtgtgattaaggacgaaggaggacacatgtag 3459390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 253 - 449
Target Start/End: Original strand, 18322952 - 18323149
Alignment:
Q  253 gttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaac 352  Q
    |||| |||||| || |||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||| ||| |    
T  18322952 gttaacactccaacgctcaagtcagtaatagaactgagaaagattgtgtagaaaatgttgtgaaaagtgaatcatacattgaggatgaagcaaggtcacc 18323051  T
Q  353 cttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggat-gatggaggacacgtgtagggtgatgctcgtgcggggg 449  Q
    ||||||||||   |  ||| | ||||||| |||||||||  ||||||| ||||||||||| | | ||||||||  ||||  |||| ||||||||||||    
T  18323052 cttatataggcaagagttgagaataactgcctccgggtttcgcggcgtgtgattagggatggttagaggacacacgtagcatgatcctcgtgcggggg 18323149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 246 - 362
Target Start/End: Original strand, 30477643 - 30477759
Alignment:
Q  246 catgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaa 345  Q
    |||||||||||||||||| || ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  30477643 catgcacgttagcactccaacgctcaagtcagtaacgaaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaagtaa 30477742  T
Q  346 gttcaaccttatatagg 362  Q
      ||| |||||||||||    
T  30477743 tgtcacccttatatagg 30477759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 268 - 411
Target Start/End: Complemental strand, 26916965 - 26916822
Alignment:
Q  268 ctcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgc 367  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||  ||  ||||||||||| ||||    
T  26916965 ctcaagtcagtaatggaactgagagagagtgtgtagaaagtgttgtgaaaagtgagtcataccttgagcatgaagcaatgtcgcccttatataggcgcgc 26916866  T
Q  368 attgggcataactgtctccgggttatgcggcgtttgattaggga 411  Q
     ||| | ||||| | |||| |||| |||||||| ||||||||||    
T  26916865 gttgagaataaccgcctccaggttttgcggcgtgtgattaggga 26916822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 251 - 341
Target Start/End: Complemental strand, 6928174 - 6928084
Alignment:
Q  251 acgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaa 341  Q
    ||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6928174 acgttagcatttcaacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaa 6928084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 246 - 365
Target Start/End: Original strand, 24507459 - 24507578
Alignment:
Q  246 catgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaa 345  Q
    |||||||||||| ||||| ||  |||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |     
T  24507459 catgcacgttagtactccaacgatcaagtcaataatggaaatgagaaagagtgtctagaaagtgttgtgaaaagtgaatcataccttgagggtgaagtag 24507558  T
Q  346 gttcaaccttatataggtgc 365  Q
    ||||| || |||||||||||    
T  24507559 gttcacccatatataggtgc 24507578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 251 - 411
Target Start/End: Complemental strand, 17698369 - 17698209
Alignment:
Q  251 acgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttca 350  Q
    ||||||||| ||| |||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||  ||    
T  17698369 acgttagcattccaacatgcaagtcagtaatggaaccgagaaagagtgtgtagaaagtgttgtgaaaagtgaattatactttgagggtgaagcaaggcca 17698270  T
Q  351 accttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattaggga 411  Q
     || |||||||| |||| | | ||||||| |||| ||  ||  ||||||| ||||||||||    
T  17698269 cccatatataggcgcgcgtcgagcataaccgtcttcgaatttagcggcgtgtgattaggga 17698209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 250 - 411
Target Start/End: Original strand, 5859821 - 5859982
Alignment:
Q  250 cacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttc 349  Q
    |||||||||||||| || ||||||||| |||||||||| ||||| ||||||| || |||||| ||| ||||||||| |||||||||  ||||||||| ||    
T  5859821 cacgttagcactccaacgctcaagtcaataatggaactaagaaatagtgtgttgagagtgttttgagaagtgaatcgtaccttgagattgaagcaaggtc 5859920  T
Q  350 aaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattaggga 411  Q
    | ||||||||||| |||| ||||  ||||| | ||| || || |||||||  ||||||||||    
T  5859921 acccttatataggcgcgcgttggaaataaccgcctctggattttgcggcgagtgattaggga 5859982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 279 - 436
Target Start/End: Complemental strand, 11776299 - 11776142
Alignment:
Q  279 aatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataa 378  Q
    ||||||||||||||||||||| ||   ||||||| |||||||||    |||||||||| |||| |||||||| | |||||||||||||| ||||||||||    
T  11776299 aatggaactgagaaagagtgtttaaggagtgttgggaaaagtgatatgtaccttgagggtgaaacaagttcacctttatataggtgcgcgttgggcataa 11776200  T
Q  379 ctgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggtgat 436  Q
    | |||||||| | ||||||||| |||||| |||||  | | ||||| |||||||||||    
T  11776199 ccgtctccggataatgcggcgtgtgattaaggatggagcatgacacatgtagggtgat 11776142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 268 - 408
Target Start/End: Original strand, 13754782 - 13754921
Alignment:
Q  268 ctcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgc 367  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||| |  |||  ||||||||||  |||    
T  13754782 ctcaagtcagtaatgaaactgagaaagagtgtgtagaaagtgttgtgtaaagtgaatcctaccttgagggtgaagctaagtcactcttatataggcacgc 13754881  T
Q  368 attgggcataactgtctccgggttatgcggcgtttgattag 408  Q
    | || | ||||| |||| ||| || |||||||| |||||||    
T  13754882 a-tgagaataaccgtcttcggattttgcggcgtgtgattag 13754921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 246 - 345
Target Start/End: Complemental strand, 17927793 - 17927694
Alignment:
Q  246 catgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaa 345  Q
    |||||||||||||||||| || || |||||||||||||||||||||  |||| ||||||||||||| ||||| |||||||||||||| ||| ||||||||    
T  17927793 catgcacgttagcactccaacgcttaagtcagtaatggaactgagattgagtatgtagaaagtgttatgaaaggtgaatcataccttaagggtgaagcaa 17927694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 199 - 309
Target Start/End: Original strand, 23269201 - 23269311
Alignment:
Q  199 tctggtacggaggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtg 298  Q
    |||||||||| |||| |||||| | ||||||||| | || ||| ||||| ||| ||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  23269201 tctggtacggtggcgatgagtctttgcggtggaacgaaaggtgtctacaggcaagttagcactccaacacttaagtcagtaatggaactgataaagagtg 23269300  T
Q  299 tgtagaaagtg 309  Q
    |||||||||||    
T  23269301 tgtagaaagtg 23269311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 239 - 409
Target Start/End: Complemental strand, 24576679 - 24576509
Alignment:
Q  239 gtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggat 338  Q
    |||||| || |||||||| ||||| ||| |||||||||||||||||||| | || |||||||||  |||||||||||||||| |    |||||||||| |    
T  24576679 gtgcctgcaggcacgttaacactctgacgctcaagtcagtaatggaactaaaaatgagtgtgtaagaagtgttgtgaaaagtaatgtgtaccttgagggt 24576580  T
Q  339 gaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagg 409  Q
    |||| ||||||| |||||||||||  ||| |||  |||||| | |||| ||||||||| ||| ||||||||    
T  24576579 gaaggaagttcacccttatataggcacgcgttgatcataaccgcctccaggttatgcgacgtgtgattagg 24576509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 224 - 405
Target Start/End: Complemental strand, 4565504 - 4565323
Alignment:
Q  224 gcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaa 323  Q
    ||||||||| | || ||| || || ||| ||||||||||||||| |||||| ||||||| |||||| | |||  || ||  |||||||||||||||||      
T  4565504 gcggtggaacgaaaggtgtctgcaggcatgttagcactccgacaatcaagttagtaatgaaactgaaagagaaagtataagaagtgttgtgaaaagtgtt 4565405  T
Q  324 tcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgat 405  Q
       |||||||||| ||||||||||||| ||||||||| | ||||    ||||||||||||||||||||||||||||| ||||    
T  4565404 gtgtaccttgagggtgaagcaagttcacccttatataagcgcgctcgtggcataactgtctccgggttatgcggcgtgtgat 4565323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 258 - 337
Target Start/End: Original strand, 24070866 - 24070946
Alignment:
Q  258 cactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcat-accttgagga 337  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  24070866 cactccaacacttaagtcagtaatggaactaagaaagagtgtgtagaaagtgttgtgagaagtgaatcataaccttgagga 24070946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 450
Target Start/End: Complemental strand, 17319665 - 17319521
Alignment:
Q  302 agaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtt 401  Q
    |||||| ||||||||||||||||||| ||| |||| ||||||||||||| | ||||||||  ||||||||| |||||| | ||   |||||||| ||||     
T  17319665 agaaagagttgtgaaaagtgaatcatgcctcgagggtgaagcaagttcacctttatatag--gcgcattggtcataaccg-ct-atggttatgccgcgtg 17319570  T
Q  402 tgattagggatgatggaggacacgtgtagggtgatgctcgtgcgggggc 450  Q
    |||||||||||   |||||||||||||| |||||| || ||||||||||    
T  17319569 tgattagggatcgaggaggacacgtgtatggtgatcctggtgcgggggc 17319521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 249 - 384
Target Start/End: Original strand, 15058040 - 15058175
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    ||||||||||||| | || | ||||| ||||||| || ||||||| | |||||||||||||| ||||||| | ||||||||||||||| |||| |||  |    
T  15058040 gcacgttagcactacaacgcacaagttagtaatgaaattgagaaaaaatgtgtagaaagtgtggtgaaaaataaatcataccttgagggtgaaacaacgt 15058139  T
Q  349 caaccttatataggtgcgcattgggcataactgtct 384  Q
    ||  |||||||| |||||||||| | ||||| ||||    
T  15058140 cacacttatataagtgcgcattgaggataaccgtct 15058175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 269 - 324
Target Start/End: Original strand, 13765014 - 13765069
Alignment:
Q  269 tcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaat 324  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  13765014 tcaagtgagtaatgaaactgagaaagagtgtgtagaaagtgttgtgtaaagtgaat 13765069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 338 - 397
Target Start/End: Original strand, 16214721 - 16214780
Alignment:
Q  338 tgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcgg 397  Q
    ||||||||||||| ||||||||||| |||| |  |||||||| |||||||||||||||||    
T  16214721 tgaagcaagttcacccttatataggcgcgcttgtggcataaccgtctccgggttatgcgg 16214780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 20242307 - 20242249
Alignment:
Q  36 aagtgcaatcaatcataagaatcaaaagggagagaagtgaaatcaatcaagagaatcaa 94  Q
    ||||||||||||||| |||| ||||| |||||||||||| |||||||||  ||||||||    
T  20242307 aagtgcaatcaatcagaagagtcaaaggggagagaagtgcaatcaatcagaagaatcaa 20242249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 20250853 - 20250911
Alignment:
Q  36 aagtgcaatcaatcataagaatcaaaagggagagaagtgaaatcaatcaagagaatcaa 94  Q
    ||||||||||||||| |||| ||||| |||||||||||| |||||||||  ||||||||    
T  20250853 aagtgcaatcaatcagaagagtcaaaggggagagaagtgcaatcaatcagaagaatcaa 20250911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 362
Target Start/End: Complemental strand, 23497194 - 23497136
Alignment:
Q  304 aaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatatagg 362  Q
    ||||||||||||| ||||||||||||||||||| | ||||||  ||| |||||||||||    
T  23497194 aaagtgttgtgaatagtgaatcataccttgagggttaagcaaagtcacccttatatagg 23497136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 276 - 309
Target Start/End: Original strand, 7220553 - 7220586
Alignment:
Q  276 agtaatggaactgagaaagagtgtgtagaaagtg 309  Q
    ||||||||||||||||||||||||||||||||||    
T  7220553 agtaatggaactgagaaagagtgtgtagaaagtg 7220586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 305 - 410
Target Start/End: Original strand, 20055625 - 20055729
Alignment:
Q  305 aagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttga 404  Q
    ||||||||||||||||||    |||||| ||| ||||||||||||| ||||||||||| |||| ||| |||||||  |||||| |  |||||| || |||    
T  20055625 aagtgttgtgaaaagtgatgtgtacctt-agggtgaagcaagttcatccttatataggcgcgccttgagcataaccatctccgtgagatgcggggtatga 20055723  T
Q  405 ttaggg 410  Q
    ||||||    
T  20055724 ttaggg 20055729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 20242369 - 20242328
Alignment:
Q  33 gataagtgcaatcaatcataagaatcaaaagggagagaagtg 74  Q
    |||||||||||||||||| |||||||||||||| ||||||||    
T  20242369 gataagtgcaatcaatcaaaagaatcaaaagggggagaagtg 20242328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 20250791 - 20250832
Alignment:
Q  33 gataagtgcaatcaatcataagaatcaaaagggagagaagtg 74  Q
    |||||||||||||||||| |||||||||||||| ||||||||    
T  20250791 gataagtgcaatcaatcaaaagaatcaaaagggggagaagtg 20250832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 16579348 - 16579429
Alignment:
Q  36 aagtgcaatcaatcataagaatcaaaagggagagaagtgaaatcaatcaagagaatcaatagctagaaatgcaatcaattagaa 119  Q
    ||||||||||||||| |||||||||||  | ||||||||||||||||||| | ||||| |||  |||| | |||||||| ||||    
T  16579348 aagtgcaatcaatcacaagaatcaaaa--gtgagaagtgaaatcaatcaaaataatcactagggagaagtacaatcaatcagaa 16579429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 330
Target Start/End: Original strand, 7220617 - 7220648
Alignment:
Q  299 tgtagaaagtgttgtgaaaagtgaatcatacc 330  Q
    ||||||||||||||||||||||||||||||||    
T  7220617 tgtagaaagtgttgtgaaaagtgaatcatacc 7220648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 16584092 - 16584139
Alignment:
Q  36 aagtgcaatcaatcataagaatcaaaagggagagaagtgaaatcaatcaa 85  Q
    ||||||||||||||| |||||||||||  | |||||||||||||||||||    
T  16584092 aagtgcaatcaatcaaaagaatcaaaa--gtgagaagtgaaatcaatcaa 16584139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 279 - 385
Target Start/End: Original strand, 23243819 - 23243925
Alignment:
Q  279 aatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataa 378  Q
    ||||||||||| | | ||||||||  ||||||||||||||||||    || ||||||| |||||||||||||  ||||||||   |||| ||| ||||||    
T  23243819 aatggaactgaaagatagtgtgtaagaagtgttgtgaaaagtgatgtgtatcttgagggtgaagcaagttcactcttatatacacgcgccttgagcataa 23243918  T
Q  379 ctgtctc 385  Q
    | |||||    
T  23243919 ccgtctc 23243925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20242307 - 20242247
Alignment:
Q  1 aagtgcaatcaatcagaagaataaaattaggagataagtgcaatcaatcataagaatcaaaa 62  Q
    |||||||||||||||||||| | |||   ||||| ||||||||||||||| |||||||||||    
T  20242307 aagtgcaatcaatcagaagagtcaaagg-ggagagaagtgcaatcaatcagaagaatcaaaa 20242247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 20250853 - 20250913
Alignment:
Q  1 aagtgcaatcaatcagaagaataaaattaggagataagtgcaatcaatcataagaatcaaaa 62  Q
    |||||||||||||||||||| | |||   ||||| ||||||||||||||| |||||||||||    
T  20250853 aagtgcaatcaatcagaagagtcaaagg-ggagagaagtgcaatcaatcagaagaatcaaaa 20250913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 14666935 - 14666883
Alignment:
Q  239 gtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgaga 291  Q
    |||||| || ||||||||||||||||||  |||||||| |||||||| |||||    
T  14666935 gtgcctgcaggcacgttagcactccgacgatcaagtcaataatggaattgaga 14666883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 269 - 297
Target Start/End: Complemental strand, 17319685 - 17319657
Alignment:
Q  269 tcaagtcagtaatggaactgagaaagagt 297  Q
    |||||||||||||||||||||||||||||    
T  17319685 tcaagtcagtaatggaactgagaaagagt 17319657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 369 - 453
Target Start/End: Original strand, 24070952 - 24071036
Alignment:
Q  369 ttgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggtgatgctcgtgcgggggcgcg 453  Q
    |||| |||||| ||||  |||||||||||||| |||||||||| |  | |||||||| ||| |||||| || |||||||| ||||    
T  24070952 ttggtcataaccgtctatgggttatgcggcgtgtgattagggacggagaaggacacgcgtacggtgattcttgtgcggggacgcg 24071036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 4e-55; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 202 - 446
Target Start/End: Original strand, 3586321 - 3586566
Alignment:
Q  202 ggtacggaggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgt 301  Q
    ||||||| | ||||||||| | ||||||||||| || |||| | |  ||||||||| |||||||| |||||||||||||||||||||||||| |||| ||    
T  3586321 ggtacggcgacgttgagtctttgcggtggaatgaaaggtgcatgccggcacgttaggactccgacgctcaagtcagtaatggaactgagaaaaagtgagt 3586420  T
Q  302 agaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtt 401  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||| |||| |||||| |  ||  |||||||||||||     
T  3586421 agaaagtgttgtgaaaagtgaatcataccttgagggtgaagcaagttcacccttatataggcgcgcgttggtcataaccgcttcttggttatgcggcgtg 3586520  T
Q  402 tgattaggga-tgatggaggacacgtgtagggtgatgctcgtgcgg 446  Q
    ||| ||||||  | | |||||||| |||||| |||| |||||||||    
T  3586521 tgaatagggacggttagaggacacatgtaggatgatcctcgtgcgg 3586566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 215 - 361
Target Start/End: Original strand, 36267469 - 36267615
Alignment:
Q  215 tgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtg 314  Q
    |||||| |||| |||||||| || |||||| |||||| |||| |||||| || ||||||||||||||| |||||||||||||||||||||||| ||||||    
T  36267469 tgagtcttcgcagtggaatgaaaggtgcctgcatgcatgttaacactccaacgctcaagtcagtaatgaaactgagaaagagtgtgtagaaagggttgtg 36267568  T
Q  315 aaaagtgaatcataccttgaggatgaagcaagttcaaccttatatag 361  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||    
T  36267569 aaaagtgaatcataccttgagggtgaagcaagttcacccttatatag 36267615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 249 - 444
Target Start/End: Original strand, 20120352 - 20120547
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||| ||||| |||||||||||||||||||| | || |||||     
T  20120352 gcacgttagcactccgactctcaagtcagtaatgaaactgagaaagagtgtgtggaaagtggtgtgataagtgaatcataccttgagggtaaaacaagtc 20120451  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggtgatgctcgtgc 444  Q
    || |||||||||||||||  |||| |||||  |||||  ||||||||||||| |||||| |||||  || ||||||||| | | |||| |||||||    
T  20120452 catccttatataggtgcgtgttggtcataatcgtctctaggttatgcggcgtgtgattaaggatggaggcggacacgtgaatgttgatcctcgtgc 20120547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 249 - 445
Target Start/End: Original strand, 15825159 - 15825355
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    |||||||||||||  ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |    |||||||||| |||||||||||    
T  15825159 gcacgttagcactttgacgctcaagtcggtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtcatgtgtaccttgagggtgaagcaagtt 15825258  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggtgatgctcgtgcg 445  Q
    || |||| |||||| |||| |||| |||||| |||| || |||||||||||| || ||| ||| |  | ||||||| ||||||||||| || |||||    
T  15825259 cacccttgtataggcgcgcgttggtcataaccgtcttcgagttatgcggcgtgtgtttaaggacggagtaggacacatgtagggtgatccttgtgcg 15825355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 249 - 444
Target Start/End: Complemental strand, 10923251 - 10923056
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    |||||||| ||||||||||||||||||||| |||||||| | ||||||||||||||||||| |||||||||||||   | |||||||| |||||||||||    
T  10923251 gcacgttatcactccgacactcaagtcagttatggaacttataaagagtgtgtagaaagtgctgtgaaaagtgaagtgtgccttgagggtgaagcaagtt 10923152  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggtgatgctcgtgc 444  Q
    || |||||||||   | |  |||| |||||| |||| ||| ||||||||||| ||||||| || |   |||||||||||||||||||| |||||||    
T  10923151 cacccttatatacacgtgtgttggtcataacagtcttcggcttatgcggcgtgtgattagagacggaagaggacacgtgtagggtgatcctcgtgc 10923056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 251 - 430
Target Start/End: Original strand, 24499796 - 24499973
Alignment:
Q  251 acgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttca 350  Q
    ||||||||||||| || |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  24499796 acgttagcactccaacgctcaagtcagtaatggaaatgagaaagagtgtgtagaaaatgttgtgaaaagtgaatcataccttaagggtgaagcaagttca 24499895  T
Q  351 accttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggat-gatggaggacacgtgtag 430  Q
     ||||||| ||| | || ||| | ||||   ||| |||||| |||  ||| ||||||||||| | ||||||||||||||||    
T  24499896 cccttataaaggcgtgcgttgagaataa---tcttcgggttttgctacgtgtgattagggatggctggaggacacgtgtag 24499973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 210 - 436
Target Start/End: Original strand, 18135837 - 18136063
Alignment:
Q  210 ggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtg 309  Q
    ||||||||||| || |||||| ||| || ||||||  | ||||||||| |||| ||| ||||||| |||||||||||||||||||||||||||  |||||    
T  18135837 ggcgttgagtcttcacggtgggatgaaaggtgcctgtaggcacgttagtactctgacgctcaagttagtaatggaactgagaaagagtgtgtaagaagtg 18135936  T
Q  310 ttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagg 409  Q
    |||| ||||||||   |||||| || | ||||||||||||| ||||||||||| || | |||| ||  |||||||||  || ||||| ||| ||||||||    
T  18135937 ttgtcaaaagtgatgtatacctagaaggtgaagcaagttcacccttatataggcgcacgttggccactactgtctccacgtaatgcgacgtgtgattagg 18136036  T
Q  410 gatgatggaggacacgtgtagggtgat 436  Q
    || | || ||||||| |||||||||||    
T  18136037 gacggtgcaggacacatgtagggtgat 18136063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 246 - 409
Target Start/End: Original strand, 29711020 - 29711181
Alignment:
Q  246 catgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaa 345  Q
    |||||||||||||||||| || ||||||||| |||||||| |||  ||||| |||||  ||||||||||||||||||    |||||||||| ||||||||    
T  29711020 catgcacgttagcactccaacgctcaagtcactaatggaattga--aagagagtgtacgaagtgttgtgaaaagtgatgtgtaccttgagggtgaagcaa 29711117  T
Q  346 gttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagg 409  Q
    ||||| ||||||||||| ||||||||||| |||| ||||||| |||||||||| | ||||||||    
T  29711118 gttcacccttatataggcgcgcattgggcttaaccgtctccgtgttatgcggcatgtgattagg 29711181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 249 - 436
Target Start/End: Complemental strand, 15390671 - 15390484
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    |||||||||||||  ||| ||||||| ||| |||||||| | ||| ||||||||  ||||||||||||||||||    |||||||||| |||||||||||    
T  15390671 gcacgttagcactttgacgctcaagtaagtgatggaactaataaacagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagggtgaagcaagtt 15390572  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggtgat 436  Q
    || ||||||||||| |||| | || |||||| ||| ||||||||||||  || |||||||||| |  | |||||||||||||||||||    
T  15390571 cacccttatataggcgcgcgtaggccataaccgtccccgggttatgcgatgtgtgattagggacggagcaggacacgtgtagggtgat 15390484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 252 - 436
Target Start/End: Complemental strand, 19050518 - 19050334
Alignment:
Q  252 cgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaa 351  Q
    ||||||||||| ||| |||||||||||||| ||||| |||||||| |||||  ||||||||||||||||||    |||| ||||  ||||| |||||||     
T  19050518 cgttagcactctgacgctcaagtcagtaatagaactaagaaagagagtgtaagaagtgttgtgaaaagtgatgtgtaccctgagagtgaagtaagttcac 19050419  T
Q  352 ccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggtgat 436  Q
    |||||||||||   || |||| |||||||  |||||||||||||||||| |||||||| |||  | |||||| ||||||||||||    
T  19050418 ccttatataggcttgcgttggccataactaactccgggttatgcggcgtatgattaggcatggagcaggacatgtgtagggtgat 19050334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 239 - 397
Target Start/End: Complemental strand, 24157402 - 24157244
Alignment:
Q  239 gtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggat 338  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||| | |  || ||  ||||||||||||||||      |||||||||| |    
T  24157402 gtgcctacatgcacgttagcactctgacgctcaagtcagtaatggaactgagagataaagtctaagaagtgttgtgaaaagtattgtgtaccttgagggt 24157303  T
Q  339 gaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcgg 397  Q
    |||||||||||| ||||||||| | |||  |||| | ||||||||||||||||||||||    
T  24157302 gaagcaagttcacccttatataagcgcgtgttggccctaactgtctccgggttatgcgg 24157244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 210 - 363
Target Start/End: Complemental strand, 45258277 - 45258124
Alignment:
Q  210 ggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtg 309  Q
    |||| |||||| ||||||||||| | ||  || || || |||||||| |||||| |  ||||||| ||||||| |||| ||||||| ||||| |||||||    
T  45258277 ggcgatgagtcttcgcggtggaacgaaagatgtctgcaggcacgttaacactccaaagctcaagtaagtaatgaaactaagaaagaatgtgtcgaaagtg 45258178  T
Q  310 ttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggt 363  Q
    ||||||||||||||||||||||||||| ||||||||  ||| ||||||||||||    
T  45258177 ttgtgaaaagtgaatcataccttgagggtgaagcaaagtcacccttatataggt 45258124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 269 - 345
Target Start/End: Original strand, 12168998 - 12169074
Alignment:
Q  269 tcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaa 345  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  12168998 tcaagtcagtaatggaactaagaaagagtgtgtagaaagtgttgtgaaaagtgaattataccttgagggtgaagcaa 12169074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 249 - 360
Target Start/End: Complemental strand, 12127749 - 12127638
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    ||||||||||||||| || ||||||||||||||| |||| |||| | |||||||||||||||||||||||||||||||||| |||  | ||||||||  |    
T  12127749 gcacgttagcactccaacgctcaagtcagtaatgaaactaagaacgtgtgtgtagaaagtgttgtgaaaagtgaatcatactttggtggtgaagcaatgt 12127650  T
Q  349 caaccttatata 360  Q
    ||||||||||||    
T  12127649 caaccttatata 12127638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 271 - 362
Target Start/End: Complemental strand, 19919130 - 19919039
Alignment:
Q  271 aagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatatagg 362  Q
    |||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||  ||||||||||    
T  19919130 aagtcaataatggaaatgagaaagagtatgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaatatcactcttatatagg 19919039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 236 - 342
Target Start/End: Complemental strand, 27846618 - 27846512
Alignment:
Q  236 aaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgag 335  Q
    ||||||||| || ||||||||||||||| ||  ||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||  |||||||||    
T  27846618 aaagtgcctgcaggcacgttagcactccaacgatcaagtcagtaatggaactgagaaacagtttgtagaaagtgttgtgtaaagtgaattgtaccttgag 27846519  T
Q  336 gatgaag 342  Q
    | |||||    
T  27846518 ggtgaag 27846512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 249 - 343
Target Start/End: Original strand, 45715000 - 45715094
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagc 343  Q
    ||||||||||||||| || ||||||||||||||| ||||||||||||||||||| ||||||| ||||||| ||||||||||||||| | ||||||    
T  45715000 gcacgttagcactccaacgctcaagtcagtaatgaaactgagaaagagtgtgtaaaaagtgtggtgaaaattgaatcataccttgaaggtgaagc 45715094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 249 - 445
Target Start/End: Original strand, 18772257 - 18772450
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    |||||||||||||| ||  |||||   ||||||||||||    |||||||||||||||||||||||||||||||     ||||||||| |||||||||||    
T  18772257 gcacgttagcactctgatgctcaaagtagtaatggaact----aagagtgtgtagaaagtgttgtgaaaagtgacgtgcaccttgagggtgaagcaagtt 18772352  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgatt-agggatgatggaggacacgtgtagggtgatgctcgtgcg 445  Q
    || ||||||||||   | | |||| ||||||||||||||| ||||||||||| ||||| | |||||  |||||| || ||||||||||| ||| ||||    
T  18772353 cacccttatatagacacacgttggtcataactgtctccggattatgcggcgtgtgattaatggatggaggaggatacatgtagggtgatcctcatgcg 18772450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 18770307 - 18770392
Alignment:
Q  239 gtgcctacat--gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtga 322  Q
    ||||||||||  |||||||||||||| ||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  18770307 gtgcctacataggcacgttagcactctgacgctcaagtcagtaatgaaattgagaaagagtgtgtagaaagtgttgtgaaaagtga 18770392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 343
Target Start/End: Original strand, 24755468 - 24755567
Alignment:
Q  244 tacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagc 343  Q
    |||| ||||||||| ||||| || ||||||||||| ||||||||  |||| |||||||||||| |||||||||||||||||| |||||| | ||||||||    
T  24755468 tacaagcacgttagtactccaaccctcaagtcagtgatggaactctgaaaaagtgtgtagaaattgttgtgaaaagtgaatcgtacctttaagatgaagc 24755567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 369 - 456
Target Start/End: Original strand, 30638662 - 30638749
Alignment:
Q  369 ttgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggtgatgctcgtgcgggggcgcgctt 456  Q
    |||| ||||||||||| ||||||||||||| | ||||||||||||  |||||||||||||| |||||| ||| |||||||| ||||||    
T  30638662 ttggtcataactgtctgcgggttatgcggcatgtgattagggatggaggaggacacgtgtaaggtgatcctcatgcgggggagcgctt 30638749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 198 - 309
Target Start/End: Original strand, 30638517 - 30638628
Alignment:
Q  198 ttctggtacggaggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagt 297  Q
    |||||||| || || |||||||||||||||||||| | ||  || |||||  ||||||| |||| |||| |||| ||||||||||||||| |||||||||    
T  30638517 ttctggtagggtggtgttgagtcatcgcggtggaaagaaagatgtctacagacacgttaacacttcgacgctcatgtcagtaatggaactaagaaagagt 30638616  T
Q  298 gtgtagaaagtg 309  Q
    | || |||||||    
T  30638617 gcgtggaaagtg 30638628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 251 - 448
Target Start/End: Original strand, 29137908 - 29138106
Alignment:
Q  251 acgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtga-atcataccttgaggatgaagcaagttc 349  Q
    |||||||||| ||||| ||||||||| ||||| |||||||||||||||||||  || ||||||| ||||||| |   ||||  |||  |||||||||| |    
T  29137908 acgttagcacaccgacgctcaagtcattaatgcaactgagaaagagtgtgtaagaaatgttgtggaaagtgagaatgtaccccgagagtgaagcaagtcc 29138007  T
Q  350 aaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggtgatgctcgtgcgggg 448  Q
    | |  ||||| ||  ||| |||| ||||||  |||||| ||||||| |||| |||||||||| |  | || ||||||||||||| || |||| ||||||    
T  29138008 acctctatatgggcacgcgttggtcataaccatctccgagttatgctgcgtgtgattagggacggagtagtacacgtgtagggtaatcctcgcgcgggg 29138106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 408
Target Start/End: Original strand, 19290550 - 19290631
Alignment:
Q  327 taccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattag 408  Q
    |||||| ||| ||||||||||||| |||||||||| ||||| | || |||||| ||||||||||||||| |||| |||||||    
T  19290550 taccttaagggtgaagcaagttcacccttatatagatgcgcttgggtcataaccgtctccgggttatgcagcgtatgattag 19290631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 362
Target Start/End: Original strand, 23257793 - 23257899
Alignment:
Q  255 tagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaacct 354  Q
    |||||||  ||| ||||||||||| | |||| ||| || ||||||||||||||||| | |||||||||||  |||||||||| |||| |||| ||| |||    
T  23257793 tagcactttgacgctcaagtcagtgaaggaaatgacaaggagtgtgtagaaagtgtgg-gaaaagtgaattgtaccttgagggtgaatcaaggtcaccct 23257891  T
Q  355 tatatagg 362  Q
    ||||||||    
T  23257892 tatatagg 23257899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 409
Target Start/End: Original strand, 24318999 - 24319077
Alignment:
Q  331 ttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagg 409  Q
    |||||| ||||||||||||| ||||||||||| ||||  | |||||||| ||||| |||||||||  ||| ||||||||    
T  24318999 ttgagggtgaagcaagttcacccttatataggcgcgctcttggcataaccgtctctgggttatgcaacgtatgattagg 24319077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 275 - 342
Target Start/End: Original strand, 18134349 - 18134418
Alignment:
Q  275 cagtaatggaactgagaaagagtgtgtag--aaagtgttgtgaaaagtgaatcataccttgaggatgaag 342  Q
    ||||||||||| ||||||||||| |||||  ||||| ||||||||| |||||  |||||||||| |||||    
T  18134349 cagtaatggaattgagaaagagtatgtagaaaaagtattgtgaaaaatgaattgtaccttgagggtgaag 18134418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 249 - 335
Target Start/End: Original strand, 36022466 - 36022551
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgag 335  Q
    |||||||| |||||  || |||||||||||| ||  ||||||||||||| |||| |||||| || | ||||||||||||| ||||||    
T  36022466 gcacgttaacactctaacgctcaagtcagtattgagactgagaaagagtttgtaaaaagtg-tgagcaaagtgaatcatatcttgag 36022551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 38583930 - 38583993
Alignment:
Q  6 caatcaatcagaagaataaaattaggagataagtgcaatcaatcataagaatcaaaagggagagaa 71  Q
    ||||||||||||||||| |||   |||||  |||||||||||||| |||||||||||||| |||||    
T  38583930 caatcaatcagaagaatcaaagggggaga--agtgcaatcaatcagaagaatcaaaagggcgagaa 38583993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 32290817 - 32290746
Alignment:
Q  4 tgcaatcaatcagaagaa-taaaattaggagataagtgcaat-caatcataagaatcaaaagggagagaagtg 74  Q
    |||||||||||||||||| |||||| ||| || ||||||||| |||||| ||||| |||||||| ||||||||    
T  32290817 tgcaatcaatcagaagaactaaaatgagg-gagaagtgcaatacaatcagaagaaccaaaagggggagaagtg 32290746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 107; Significance: 2e-53; HSPs: 2)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 250 - 456
Target Start/End: Complemental strand, 15515 - 15309
Alignment:
Q  250 cacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttc 349  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15515 cacgttagcactccgacgctccagtcagtaatggaactgagaaagagtatctagaaagtgttgtgaaaagtgaatcataccttgagggtgaagcaagttc 15416  T
Q  350 aaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggtgatgctcgtgcggggg 449  Q
    | |||||||||||||| | || | |||||| || ||||| ||||||| | | ||||||||||  | ||||||||| |||| |||||| ||||   |||||    
T  15415 acccttatataggtgcacgttagtcataaccgtgtccggattatgcgacatgtgattagggacaaaggaggacacatgtaaggtgatcctcgcaaggggg 15316  T
Q  450 cgcgctt 456  Q
    |||||||    
T  15315 cgcgctt 15309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 203 - 408
Target Start/End: Complemental strand, 8708 - 8508
Alignment:
Q  203 gtacggaggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgta 302  Q
    |||||| ||||||||||| | ||||||||||  || |||  | || ||||||||||||| |||| ||||||||||||||| |||||| ||| ||||||||    
T  8708 gtacggcggcgttgagtctttgcggtggaataaaaggtgtttgca-gcacgttagcacttcgacgctcaagtcagtaatgaaactgaaaaacagtgtgta 8610  T
Q  303 gaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgttt 402  Q
    |||||||||||||||||||||||||||||| ||| ||||     |||| ||||||||||| |||| ||| ||||||| ||||||||||||||| ||||||    
T  8609 gaaagtgttgtgaaaagtgaatcataccttaagggtgaac----ttcacccttatataggcgcgcgttgagcataaccgtctccgggttatgcagcgttt 8514  T
Q  403 gattag 408  Q
    ||||||    
T  8513 gattag 8508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 107; Significance: 2e-53; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 202 - 456
Target Start/End: Original strand, 19643660 - 19643914
Alignment:
Q  202 ggtacggaggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgt 301  Q
    ||||||| ||||||||||| ||| | ||||| |||| |||||  || | |||||| || |||||| || |||||||||||||||||||||||||||||||    
T  19643660 ggtacggcggcgttgagtcttcgtgatggaacggaaggtgcccgcaggtacgttaccaatccgacgcttaagtcagtaatggaactgagaaagagtgtgt 19643759  T
Q  302 agaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtt 401  Q
    ||||||| ||||||||||||||||||||||||||| |||| |||||||| ||||||||||| | || ||| | ||||| ||||| | ||||||||||||     
T  19643760 agaaagtcttgtgaaaagtgaatcataccttgagggtgaaacaagttcacccttatataggcgtgcgttgaggataaccgtctctgagttatgcggcgtg 19643859  T
Q  402 tgattagggatgatggaggacacgtgtagggtgatgctcgtgcgggggcgcgctt 456  Q
     ||||||||| | | |||||||| | || |||||| |||| ||||||||| ||||    
T  19643860 agattagggacggtagaggacacatataaggtgatcctcgcgcgggggcgtgctt 19643914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 215 - 407
Target Start/End: Original strand, 12683756 - 12683948
Alignment:
Q  215 tgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtg 314  Q
    |||||| | ||||||||| | || |||||| || ||||||||||||||| || ||||||| ||||||| |||||||||||||||||||||||||||||||    
T  12683756 tgagtctttgcggtggaacgaaaggtgcctgcaggcacgttagcactccaacgctcaagttagtaatgaaactgagaaagagtgtgtagaaagtgttgtg 12683855  T
Q  315 aaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgatta 407  Q
    |||||||||||||||||| ||| ||||||||||||| |||||| |||| |||||||  ||||||| ||||||| |||||||| ||| ||||||    
T  12683856 aaaagtgaatcataccttaagggtgaagcaagttcacccttatctaggcgcgcattaagcataaccgtctccgagttatgcgacgtatgatta 12683948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 253 - 441
Target Start/End: Complemental strand, 2674652 - 2674467
Alignment:
Q  253 gttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaac 352  Q
    ||||||||||| || | ||||||| ||||| ||||||||    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  2674652 gttagcactccaacgcacaagtcaataatgtaactgaga----gtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagtaagttcacc 2674557  T
Q  353 cttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattaggga-tgatggaggacacgtgtagggtgatgctcg 441  Q
    |||||||| | |||| ||| ||||||| |||||||| || |||||||| ||||||||||  | | |||||||||||||||||||| ||||    
T  2674556 cttatataagcgcgcgttgagcataaccgtctccggattttgcggcgtgtgattagggacagttagaggacacgtgtagggtgatcctcg 2674467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 253 - 408
Target Start/End: Original strand, 47253286 - 47253440
Alignment:
Q  253 gttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaac 352  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |  ||| |    
T  47253286 gttagcactccaacgctcaagtcagtaatggaactgagaaagagtgtgtaaaaagtgttgtgaaaagtgaatcataccttgagggtgaagctaagtcacc 47253385  T
Q  353 cttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattag 408  Q
    |||||||||| ||||| ||   ||||||||||||||||| ||||| || |||||||    
T  47253386 cttatataggcgcgca-tgataataactgtctccgggttttgcggtgtgtgattag 47253440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 249 - 436
Target Start/End: Complemental strand, 15742239 - 15742053
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    ||||||||||||||  || |||||||||||||||||||||||||| ||||||||  ||||||||||||||||||    |||||||||  |||||||| ||    
T  15742239 gcacgttagcactcttacgctcaagtcagtaatggaactgagaaaaagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagactgaagcaaatt 15742140  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggtgat 436  Q
    || ||||||||||| |||  |||| |||||| |||||||||||||||||||| |||||| ||| || | | |||||||||||||||||    
T  15742139 cacccttatataggcgcgtgttggccataaccgtctccgggttatgcggcgtgtgattaaggacga-gcaagacacgtgtagggtgat 15742053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 250 - 409
Target Start/End: Original strand, 5518546 - 5518705
Alignment:
Q  250 cacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttc 349  Q
    |||||||||||| | || |||||||||||||| ||||||||| ||| ||||||  |||||||||| |||||||  | |||||||||| ||||||||||||    
T  5518546 cacgttagcacttcaacgctcaagtcagtaattgaactgagagagaatgtgtaagaagtgttgtggaaagtgatgcgtaccttgagggtgaagcaagttc 5518645  T
Q  350 aaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagg 409  Q
    | ||||||||||| |||  ||||||||||| |||||||||||||  ||||| ||||||||    
T  5518646 acccttatataggcgcgtgttgggcataaccgtctccgggttataaggcgtatgattagg 5518705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 250 - 455
Target Start/End: Original strand, 29157108 - 29157314
Alignment:
Q  250 cacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttc 349  Q
    |||||| ||||||| || ||||||| |||||||||||||||||| ||||||||| |||||||||| |||||||| |||||||||| | ||||| ||||||    
T  29157108 cacgtttgcactccaacgctcaagttagtaatggaactgagaaaaagtgtgtagtaagtgttgtgtaaagtgaaccataccttgatggtgaagtaagttc 29157207  T
Q  350 aaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattaggga-tgatggaggacacgtgtagggtgatgctcgtgcgggg 448  Q
    | ||||||||||| |||| | | | ||||| ||||| ||||||||||||   ||||||||||  | | |||||||| |||||| |||| |||  |||| |    
T  29157208 acccttatataggcgcgcgtagaggataaccgtctctgggttatgcggctaatgattagggacggttagaggacacatgtaggatgatcctcacgcggtg 29157307  T
Q  449 gcgcgct 455  Q
    |||||||    
T  29157308 gcgcgct 29157314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 249 - 410
Target Start/End: Complemental strand, 15514647 - 15514486
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    ||||||||||||||| || |||||||||||||||||||||| ||||||||||||  |||||||||| |||||||    |||||||||| |||||||||||    
T  15514647 gcacgttagcactccaacgctcaagtcagtaatggaactgaaaaagagtgtgtaagaagtgttgtggaaagtgatgtgtaccttgagggtgaagcaagtt 15514548  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattaggg 410  Q
    || |||||||||||  |||  ||| ||||||  ||||| ||||||||||| | |||||||||    
T  15514547 cacccttatataggctcgccctggtcataaccatctccaggttatgcggcatatgattaggg 15514486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 249 - 409
Target Start/End: Complemental strand, 14602101 - 14601941
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    ||||||||||| ||| || ||||||||||||||| |||||| | ||||||||||  |||||||||||||||||     |||||||||| |||||||||||    
T  14602101 gcacgttagcaatccaacgctcaagtcagtaatgaaactgaaagagagtgtgtaagaagtgttgtgaaaagtgttgtgtaccttgagggtgaagcaagtt 14602002  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagg 409  Q
    || ||||||||||  | |  |||  ||||||||||||||||||||||||||| ||||||||    
T  14602001 catccttatatagccgtgtgttgatcataactgtctccgggttatgcggcgtgtgattagg 14601941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 253 - 341
Target Start/End: Original strand, 19809710 - 19809798
Alignment:
Q  253 gttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaa 341  Q
    ||||||||||| || ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  19809710 gttagcactccaacgctcaagtcagtaatgaaactaagaaagagtgtgtagaaagtgttgtgaaaagtgaattataccttgagggtgaa 19809798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 249 - 436
Target Start/End: Complemental strand, 16012557 - 16012371
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    |||||||| ||||||||| |||||||||||||||||||||||| ||||||||||  |||  |||||| ||||||    || ||||||| |||||||||||    
T  16012557 gcacgttaacactccgacgctcaagtcagtaatggaactgagatagagtgtgtaagaagcattgtgagaagtgatatgtatcttgagg-tgaagcaagtt 16012459  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggtgat 436  Q
    || ||||||||||| |||| ||||  ||||  || |||| |||||||||||| ||||||| || |  | || ||||||||||||||||    
T  16012458 cacccttatataggcgcgcgttggtaataatcgtatccgagttatgcggcgtgtgattagtgacggagcagaacacgtgtagggtgat 16012371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 249 - 409
Target Start/End: Complemental strand, 1638404 - 1638244
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    |||| |||||||||||||  ||||||||||||||||||||||| |||  || ||  |||||||  ||||||||     |||||||||| |||||||||||    
T  1638404 gcactttagcactccgacgatcaagtcagtaatggaactgagagagaaagtctaagaagtgttaagaaaagtgttgtgtaccttgagggtgaagcaagtt 1638305  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagg 409  Q
    || ||||||||||||||||    |||||||| |||||||||||||||||| | ||||||||    
T  1638304 cacccttatataggtgcgctcgtggcataaccgtctccgggttatgcggcatatgattagg 1638244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 352 - 456
Target Start/End: Complemental strand, 17746140 - 17746036
Alignment:
Q  352 ccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggtgatgctcgtgcgggggcg 451  Q
    |||| ||||| ||||  |||| |||||||||||| | |||||||| ||| |||||||| |||| ||||||||||||||||||||| |||||| |||||||    
T  17746140 ccttttatagatgcgtgttggtcataactgtctctgcgttatgcgacgtgtgattaggaatgaaggaggacacgtgtagggtgatcctcgtgtgggggcg 17746041  T
Q  452 cgctt 456  Q
    |||||    
T  17746040 cgctt 17746036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 251 - 329
Target Start/End: Original strand, 10981873 - 10981950
Alignment:
Q  251 acgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcatac 329  Q
    ||||| ||||||| |||||||||||||||||||||| ||||||||||||||| |||||| || ||||||||||||||||    
T  10981873 acgttggcactccaacactcaagtcagtaatggaaccgagaaagagtgtgtaaaaagtg-tgggaaaagtgaatcatac 10981950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 249 - 409
Target Start/End: Original strand, 18463805 - 18463965
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    ||||||||||||||  |||||||| ||||||  |||||| ||| |||  |||||   ||||||||||||||||     || ||||||| |||| ||| ||    
T  18463805 gcacgttagcactctaacactcaaatcagtatgggaacttagagagaaggtgtaaggagtgttgtgaaaagtgttgtgtatcttgagggtgaaacaattt 18463904  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagg 409  Q
    || ||||||||||| |||| |  |||||||| |||||||||||||||||||| ||||||||    
T  18463905 catccttatataggcgcgcttgtggcataaccgtctccgggttatgcggcgtatgattagg 18463965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 251 - 326
Target Start/End: Complemental strand, 14003148 - 14003073
Alignment:
Q  251 acgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatca 326  Q
    |||||||||||  ||| |||||||||||||||||||||||||||||| ||| ||||||||| |||||| |||||||    
T  14003148 acgttagcactatgacgctcaagtcagtaatggaactgagaaagagtttgtggaaagtgttatgaaaaatgaatca 14003073  T

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Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 251 - 409
Target Start/End: Original strand, 25066151 - 25066309
Alignment:
Q  251 acgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttca 350  Q
    |||||||||||| |||  ||||||||||||||||||| ||| |||   | ||  | |||||||||||||||     |||||||||| ||||||||||| |    
T  25066151 acgttagcactctgacgatcaagtcagtaatggaactaagagagaaaatctaagacgtgttgtgaaaagtgttgtgtaccttgaggttgaagcaagttta 25066250  T
Q  351 accttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagg 409  Q
     ||||||||||| |||| |  |||||||| ||||| |||||||||||||| ||| ||||    
T  25066251 cccttatataggcgcgcttgtggcataaccgtctctgggttatgcggcgtatgactagg 25066309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 341
Target Start/End: Original strand, 19818702 - 19818790
Alignment:
Q  253 gttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaa 341  Q
    ||||||||||| || |||||||||||| |  |||  |  ||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  19818702 gttagcactccaacgctcaagtcagtacttaaaccaatcaagagtgtgtagaaagtgttgtgaaaagtgaattataccttgatgatgaa 19818790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 249 - 299
Target Start/End: Original strand, 13171084 - 13171134
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgt 299  Q
    ||||||||||||||| || ||||||||||||||||||||||| ||||||||    
T  13171084 gcacgttagcactccaactctcaagtcagtaatggaactgagcaagagtgt 13171134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 24225718 - 24225601
Alignment:
Q  4 tgcaatcaatcagaagaataaaattaggagataagtgcaatcaatcataagaatcaaaagggagagaagtgaaatcaatcaagagaatcaatagctagaa 103  Q
    ||||||||||||||||||| |||  |||| | ||||||||| ||||| ||||||||||| || |||||||| ||| |||||  ||||| ||||   ||||    
T  24225718 tgcaatcaatcagaagaatcaaaagaggaaa-aagtgcaatgaatcagaagaatcaaaaaggggagaagtgcaatgaatcagaagaatgaataatgagaa 24225620  T
Q  104 atgcaatcaattagaagaa 122  Q
    ||||||||||  |||||||    
T  24225619 atgcaatcaaacagaagaa 24225601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 298
Target Start/End: Original strand, 3981921 - 3982002
Alignment:
Q  215 tgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtg 298  Q
    |||||| || |||||||| | || |||| | |||||||||||||||||| |||||||||||  |||||||||||| ||||||||    
T  3981921 tgagtcttcacggtggaacgaaaggtgcatgcatgcacgttagcactccaacactcaagtc--taatggaactgaaaaagagtg 3982002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 224 - 291
Target Start/End: Original strand, 17110678 - 17110745
Alignment:
Q  224 gcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgaga 291  Q
    ||||||||| | || |||||| || ||||||||||||||||||  ||||||||||||||||| |||||    
T  17110678 gcggtggaacgaaatgtgcctgcaagcacgttagcactccgacgatcaagtcagtaatggaattgaga 17110745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 8e-50; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 254 - 441
Target Start/End: Original strand, 11087512 - 11087700
Alignment:
Q  254 ttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaacc 353  Q
    ||||||||  ||| || |||||||||||| |||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||| |||||||| ||    
T  11087512 ttagcactttgacccttaagtcagtaatgtaactgagaaagagtatgtagattgtgttgtgaaaagtgaatcataccttgaggatgaaacaagttcaccc 11087611  T
Q  354 ttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattaggga-tgatggaggacacgtgtagggtgatgctcg 441  Q
    |||||||||||||| ||| |||||||||||||||| ||||||||||| | |||| |||  | | |||||||||||||||||||| ||||    
T  11087612 ttatataggtgcgcgttgagcataactgtctccggattatgcggcgtgtaattaaggacggttagaggacacgtgtagggtgatcctcg 11087700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 269 - 413
Target Start/End: Original strand, 16130993 - 16131137
Alignment:
Q  269 tcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgca 368  Q
    ||||||||||||||||||||| |||||||||  |||||||||||||||| |||||||||||||||||| |||| |||||| | ||||||||||| |||||    
T  16130993 tcaagtcagtaatggaactgataaagagtgtacagaaagtgttgtgaaacgtgaatcataccttgagggtgaaacaagtttacccttatataggcgcgca 16131092  T
Q  369 ttgggcataactgtctccgggttatgcggcgtttgattagggatg 413  Q
    ||  |||||||||||||||| ||||| ||| | ||||||||||||    
T  16131093 ttaagcataactgtctccggattatgtggcatgtgattagggatg 16131137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 251 - 411
Target Start/End: Original strand, 18147313 - 18147473
Alignment:
Q  251 acgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttca 350  Q
    |||||| |||||| || ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||  |||    
T  18147313 acgttaacactccaacgctcaagtcactaatggaaccgagaaagagtgtgtagaaagtgttgtgaaaagtgactcatacctttagggtgaagcaatgtca 18147412  T
Q  351 accttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattaggga 411  Q
     ||||||||||||||||||||||  |||| | ||| ||||| ||| |||| ||||||||||    
T  18147413 cccttatataggtgcgcattgggattaaccgcctctgggttttgcagcgtgtgattaggga 18147473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 268 - 536
Target Start/End: Original strand, 33596885 - 33597155
Alignment:
Q  268 ctcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgc 367  Q
    ||||| ||||||||| |||| ||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||  |||||||||| ||||    
T  33596885 ctcaactcagtaatgaaactaagaaaaagtgtgtagaaagtgttgtgaaaatggaatcataccttgaggatgaagcaagttcactcttatataggcgcgc 33596984  T
Q  368 attgggcataactgtctccgggttatgcggcgtttgattagggatgatg-gaggacacgtgtagggtgatgctcgtgcggg-ggcgcgcttgcctgcatc 465  Q
     ||| |||||| |||| |||| ||||||||||| |||||||||  | |  |||||||| |||||| |||  |||| ||||| ||||| ||    ||   |    
T  33596985 tttgagcataattgtcaccggattatgcggcgtatgattaggggcggttagaggacacatgtaggatgaccctcgcgcgggaggcgcactcatgtgtggc 33597084  T
Q  466 acagtgcacttgatctggcatgttctctcaggcacagagctttaaggtggtgtaagttatgctacgtgtca 536  Q
    || | ||||||||  |||| ||||| ||||||| | |||| ||||||||||||||||||||  ||||||||    
T  33597085 acggagcacttgagttggcgtgttccctcaggcgcggagccttaaggtggtgtaagttatgtcacgtgtca 33597155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 249 - 434
Target Start/End: Original strand, 9403177 - 9403362
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    ||||||||| |||||||| ||||||||| |||||||||||||||||||||||||  |||||||||| |||||||    |||||||||| |||||||||||    
T  9403177 gcacgttagaactccgacgctcaagtcaataatggaactgagaaagagtgtgtaagaagtgttgtggaaagtgatgtgtaccttgagggtgaagcaagtt 9403276  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggtg 434  Q
    || |||||||||||||||| |||| |||||||| |||  ||||||||| | | ||   ||||| || | |||||||||||||||||    
T  9403277 cacccttatataggtgcgcgttggccataactgcctctaggttatgcgacatgtggccagggacgaagcaggacacgtgtagggtg 9403362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 224 - 362
Target Start/End: Original strand, 19305444 - 19305582
Alignment:
Q  224 gcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaa 323  Q
    ||||||||| | || || |||| | |||||||||||||   || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19305444 gcggtggaacgaaaggttcctagaggcacgttagcacttaaacgctcaagtcagtaatggaactgagtaagagtgtgtagaaagtgttgtgaaaagtgaa 19305543  T
Q  324 tcataccttgaggatgaagcaagttcaaccttatatagg 362  Q
    ||||||||||||| ||||||||| ||| ||||| |||||    
T  19305544 tcataccttgagggtgaagcaaggtcacccttaaatagg 19305582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 249 - 442
Target Start/End: Original strand, 22572050 - 22572243
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    |||||||||||||  ||| |||| ||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||||| ||||||| |||||||||||    
T  22572050 gcacgttagcactatgacgctcatgtcagtaatggaattga-aaagagtgtgtagaaggtgttgtgtaaagtgaatcatatcttgagggtgaagcaagtt 22572148  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattaggga-tgatggaggacacgtgtagggtgatgctcgt 442  Q
    || | |||||| || |||| ||| ||||||| |||||| |||||||||  || ||||||||||  | | |||||||||||| ||||||| |||||    
T  22572149 cacctttatattggcgcgcgttgagcataaccgtctccaggttatgcgaagtatgattagggacggttagaggacacgtgtggggtgatcctcgt 22572243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 210 - 393
Target Start/End: Complemental strand, 19730715 - 19730533
Alignment:
Q  210 ggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtg 309  Q
    ||||||||||| ||| ||||||| | ||||||| | || ||| ||||||||||| || ||||||||| |||||||||||||||||||||||||  |||||    
T  19730715 ggcgttgagtcttcgtggtggaa-gtaaagtgcatgcaggcatgttagcactccaacgctcaagtcaataatggaactgagaaagagtgtgtaagaagtg 19730617  T
Q  310 ttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttat 393  Q
    | ||| |||||||    |||||||||| ||||||||||||| |||||||||||||||||||||  ||||| || ||| ||||||    
T  19730616 tcgtgtaaagtgatgtgtaccttgagggtgaagcaagttcacccttatataggtgcgcattggctataaccgtgtccaggttat 19730533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 250 - 408
Target Start/End: Original strand, 30680998 - 30681156
Alignment:
Q  250 cacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttc 349  Q
    |||||||||||||| || ||||||||||||||| |||||| |||||| |||||||| || ||||||||||||||||||||||||||||||||||||  ||    
T  30680998 cacgttagcactccaacgctcaagtcagtaatgaaactgataaagagcgtgtagaatgtattgtgaaaagtgaatcataccttgaggatgaagcaatgtc 30681097  T
Q  350 aaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattag 408  Q
    | | ||| ||||| |||| ||| | ||||| | ||||| ||| |||||||| |||||||    
T  30681098 acctttagataggcgcgcgttgagaataaccgcctccgagttttgcggcgtgtgattag 30681156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 249 - 410
Target Start/End: Complemental strand, 12449669 - 12449508
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    |||||||||||||| ||| ||||||||||||||||| |||| ||||||||||||  |||||||||| |||||||    |||||||||| |||| ||||||    
T  12449669 gcacgttagcactctgacgctcaagtcagtaatggagctgaaaaagagtgtgtaagaagtgttgtggaaagtgatgtgtaccttgagggtgaatcaagtt 12449570  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattaggg 410  Q
     | ||||||||||| |||| |||| ||||||||||||| |||||||| | || |||||||||    
T  12449569 tacccttatataggcgcgcgttggtcataactgtctccaggttatgcagtgtgtgattaggg 12449508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 224 - 391
Target Start/End: Original strand, 20148297 - 20148462
Alignment:
Q  224 gcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaa 323  Q
    ||||||||| | ||||||| | ||  ||||||||||||||  | ||||||| |||||||||| |||||||||||||  ||||||||||||||||||||||    
T  20148297 gcggtggaacgaaaagtgcatgcagacacgttagcactccatcgctcaagttagtaatggaattgagaaagagtgt--agaaagtgttgtgaaaagtgaa 20148394  T
Q  324 tcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggtt 391  Q
    ||||||||||| | ||||||||| ||| |||||||||||  ||| ||| | ||||||| |||||||||    
T  20148395 tcataccttgatggtgaagcaaggtcacccttatataggcacgcgttgagaataactgcctccgggtt 20148462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 224 - 391
Target Start/End: Complemental strand, 22184531 - 22184366
Alignment:
Q  224 gcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaa 323  Q
    ||||||||| | ||||||| | ||  ||||||||||||||  | ||||||| |||||||||| |||||||||||||  ||||||||||||||||||||||    
T  22184531 gcggtggaacgaaaagtgcatgcagacacgttagcactccatcgctcaagttagtaatggaattgagaaagagtgt--agaaagtgttgtgaaaagtgaa 22184434  T
Q  324 tcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggtt 391  Q
    ||||||||||| | ||||||||| ||| |||||||||||  ||| ||| | ||||||| |||||||||    
T  22184433 tcataccttgatggtgaagcaaggtcacccttatataggcacgcgttgagaataactgcctccgggtt 22184366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 265 - 409
Target Start/End: Complemental strand, 27861018 - 27860874
Alignment:
Q  265 acactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtg 364  Q
    ||||||||||||||||||||||||| | |||| |||||  ||||||||||||||||||    ||| |||||| ||||||||||||| |||| |||||| |    
T  27861018 acactcaagtcagtaatggaactgaaagagagagtgtaagaagtgttgtgaaaagtgatgtgtactttgagggtgaagcaagttcacccttttataggcg 27860919  T
Q  365 cgcattgggcataactgtctccgggttatgcggcgtttgattagg 409  Q
    ||  |||| |||||| |||||||||||||||||||| ||||||||    
T  27860918 cgtgttggccataaccgtctccgggttatgcggcgtgtgattagg 27860874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 240 - 436
Target Start/End: Complemental strand, 31295630 - 31295434
Alignment:
Q  240 tgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatg 339  Q
    ||||| || ||| ||||||||| |||| ||||||||||||||| |||||||||||||||||||  ||||||||||||||||||    ||||| |||| ||    
T  31295630 tgcctgcaggcatgttagcacttcgacgctcaagtcagtaatgaaactgagaaagagtgtgtatgaagtgttgtgaaaagtgatatgtacctcgagggtg 31295531  T
Q  340 aagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggtgat 436  Q
    ||||||||||| ||||| ||||| | |  |||| |||||| |||| ||||||||||  ||| |||||||| | |  | | |||||||||||||||||    
T  31295530 aagcaagttcacccttacataggcgggggttggccataaccgtcttcgggttatgcttcgtgtgattaggaacggagcaagacacgtgtagggtgat 31295434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 269 - 436
Target Start/End: Original strand, 34064220 - 34064387
Alignment:
Q  269 tcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgca 368  Q
    |||||||||||||| |||| ||||||||||||||  ||||||||||||||||||    |||||||||| ||||||||||||| ||||||||||| |||      
T  34064220 tcaagtcagtaatgaaactaagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagggtgaagcaagttcacccttatataggcgcgag 34064319  T
Q  369 ttgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggtgat 436  Q
    |||| |||||| ||| ||||||||||||||   |||||||||  || | ||||||| |||| ||||||    
T  34064320 ttggccataaccgtcaccgggttatgcggcacgtgattaggggcgaagtaggacacatgtatggtgat 34064387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 265 - 342
Target Start/End: Complemental strand, 3404932 - 3404855
Alignment:
Q  265 acactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaag 342  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  3404932 acacttaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaaatgaatcataccttgagggtgaag 3404855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 239 - 408
Target Start/End: Complemental strand, 12424410 - 12424241
Alignment:
Q  239 gtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggat 338  Q
    |||||| || ||||||||||||| ||||| ||||||||||||||||||||||| |||  || || ||||||||||||||||||     |||||| ||| |    
T  12424410 gtgcctgcaggcacgttagcactacgacaatcaagtcagtaatggaactgagagagaaagtctaaaaagtgttgtgaaaagtgttgtgtaccttaagggt 12424311  T
Q  339 gaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattag 408  Q
    |||||||||||| ||||||||||| ||||    | |||||| |||||||||||||||||| | |||||||    
T  12424310 gaagcaagttcacccttatataggcgcgctcgtgacataaccgtctccgggttatgcggcatgtgattag 12424241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 251 - 456
Target Start/End: Original strand, 18566664 - 18566869
Alignment:
Q  251 acgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttca 350  Q
    ||||||||||  ||| |||  |||||||||||||||||||||||| ||||||||||| ||||| |||||||||   |||||||||| ||| |||||||||    
T  18566664 acgttagcacaacgagactggagtcagtaatggaactgagaaagattgtgtagaaagcgttgtaaaaagtgaagtctaccttgagggtgaggcaagttca 18566763  T
Q  351 accttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggtgatgctcgtgcgggggc 450  Q
     |  |||||||| |||  |||| ||||   |||||  ||||||||||||| ||||||| || | | ||||||||||||| |||||| |||||  || |||    
T  18566764 cctctatataggcgcgggttggtcatactcgtctctaggttatgcggcgtgtgattagcgacggtagaggacacgtgtaaggtgatcctcgtatggaggc 18566863  T
Q  451 gcgctt 456  Q
    ||||||    
T  18566864 gcgctt 18566869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 276 - 409
Target Start/End: Complemental strand, 19277135 - 19277003
Alignment:
Q  276 agtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggca 375  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||||    |||||||||| ||||||||||||| ||||||||||| |||| |||| ||    
T  19277135 agtaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagggtgaagcaagttcacccttatataggcgcgctttggtca 19277036  T
Q  376 taactgtctccgggttatgcggcgtttgattagg 409  Q
    |||| |||| | ||||||||||||| ||||||||    
T  19277035 taaccgtct-ctggttatgcggcgtatgattagg 19277003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 278 - 453
Target Start/End: Complemental strand, 31423894 - 31423719
Alignment:
Q  278 taatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcata 377  Q
    ||||| |||||||||||||| ||||||||||||||||| |||||||||||  ||||||| |||||||||| || ||||||||||| |||  ||||||||     
T  31423894 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaatcatgtcttgagggtgaagcaagtgcacccttatataggcgcgtgttgggcat- 31423796  T
Q  378 actgtctccgggttatgcggcgtttgattagggatga-tggaggacacgtgtagggtgatgctcgtgcgggggcgcg 453  Q
    || || ||||||||||||| ||| ||||  ||||  | | |||||||| ||||||||||| ||||||| ||| ||||    
T  31423795 accgtgtccgggttatgcgacgtgtgatcggggacaattagaggacacatgtagggtgatcctcgtgcagggacgcg 31423719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 268 - 407
Target Start/End: Complemental strand, 689924 - 689786
Alignment:
Q  268 ctcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgc 367  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||| || | |||| ||| ||||||||||| || |    
T  689924 ctcaagtcagtaatggaactgagaaagtgtgtgtataaagtgttgtgaaaagtgaatcgtaccttgaggctg-atcaaggtcacccttatataggcgcac 689826  T
Q  368 attgggcataactgtctccgggttatgcggcgtttgatta 407  Q
     |||  |||||  ||||||| ||| |||||||| ||||||    
T  689825 gttgatcataatcgtctccgagttttgcggcgtgtgatta 689786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 239 - 365
Target Start/End: Complemental strand, 15480437 - 15480311
Alignment:
Q  239 gtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggat 338  Q
    |||||| || ||| |||| |||||  || ||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||  |    
T  15480437 gtgcctgcaagcaagttatcactcgaactctcaagtcaataatgaaactgagaaaaagtgtgtagaaagtgttgtgaaaagtgaatcataccttgagagt 15480338  T
Q  339 gaagcaagttcaaccttatataggtgc 365  Q
    ||||| |  ||| ||||||||||||||    
T  15480337 gaagctaagtcacccttatataggtgc 15480311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 239 - 328
Target Start/End: Original strand, 14080479 - 14080567
Alignment:
Q  239 gtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcata 328  Q
    ||||||||| |||| ||||||||| ||| ||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  14080479 gtgcctacaggcacattagcactctgacgctcaagttagtaatg-aactgagaaagagtgtgtagtaagtgttgtgaaaagtgaatcata 14080567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 270 - 379
Target Start/End: Original strand, 17380123 - 17380232
Alignment:
Q  270 caagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcat 369  Q
    |||||||||||| |||||||||||||||||| | |||||||||||||||||||||| |||||| ||| ||| ||||| ||| ||||||||||| | || |    
T  17380123 caagtcagtaatagaactgagaaagagtgtgaataaagtgttgtgaaaagtgaatcttaccttcaggttgacgcaaggtcacccttatataggcgtgcgt 17380222  T
Q  370 tgggcataac 379  Q
    |||| |||||    
T  17380223 tgggaataac 17380232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 250 - 343
Target Start/End: Original strand, 34187305 - 34187397
Alignment:
Q  250 cacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagc 343  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||  |||||||||| ||||||    
T  34187305 cacgttagcacaccaacactcaagtcagtaatggaactgagaaagagtgtgtaaaaagtgtggtg-aaagtgaattgtaccttgagggtgaagc 34187397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 239 - 411
Target Start/End: Original strand, 16343574 - 16343746
Alignment:
Q  239 gtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggat 338  Q
    |||||| || ||||||||||||||| ||||||||||||||||||||||||||| |||  |||||  |||||||||| |||||||    ||| ||||   |    
T  16343574 gtgcctgcaggcacgttagcactccaacactcaagtcagtaatggaactgagagagaaagtgtaagaagtgttgtggaaagtgatgtgtactttgaatgt 16343673  T
Q  339 gaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattaggga 411  Q
    ||||||||||||  ||||||||||  ||| ||| ||||||| ||||||| |  ||||||||| ||||| ||||    
T  16343674 gaagcaagttcacacttatataggcacgcgttgagcataaccgtctccgtgagatgcggcgtatgattgggga 16343746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 250 - 410
Target Start/End: Complemental strand, 22497383 - 22497223
Alignment:
Q  250 cacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttc 349  Q
    ||||||||||||||||| ||||||||||||||||||| || | |||| || || ||||||||||||||||||     |||||||||| ||||||||||||    
T  22497383 cacgttagcactccgacgctcaagtcagtaatggaacagaaagagagagtataaaaagtgttgtgaaaagtgttgtgtaccttgagggtgaagcaagttc 22497284  T
Q  350 aaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattaggg 410  Q
    | || |||||||   |||    ||||||||  |||| |||||||||| ||| |||||||||    
T  22497283 acccatatatagacacgctcatggcataaccatctctgggttatgcgacgtgtgattaggg 22497223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 225 - 343
Target Start/End: Complemental strand, 9292129 - 9292012
Alignment:
Q  225 cggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaat 324  Q
    |||||||| | || |||||| || |||||||||||| |  || |||||||||||| ||||||||||||| ||| |||| |||||| || |||||||||||    
T  9292129 cggtggaacgaaaggtgcctgcaagcacgttagcacgctaacgctcaagtcagtattggaactgagaaatagtatgtaaaaagtg-tgggaaaagtgaat 9292031  T
Q  325 cataccttgaggatgaagc 343  Q
    |||||||||||| ||||||    
T  9292030 cataccttgagggtgaagc 9292012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 361
Target Start/End: Complemental strand, 10115752 - 10115659
Alignment:
Q  268 ctcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatatag 361  Q
    ||||||||||||||| ||||||||||||| | ||| ||||| |||||||||||||||||||||| |||| |||||| |  ||| ||||||||||    
T  10115752 ctcaagtcagtaatgaaactgagaaagagcgagtaaaaagttttgtgaaaagtgaatcatacctcgagggtgaagctaagtcagccttatatag 10115659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 4251110 - 4251034
Alignment:
Q  269 tcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaa 345  Q
    |||||||||||||| || |||||||||||||| ||| ||||||||||||||| ||||||| ||||||| ||||||||    
T  4251110 tcaagtcagtaatgaaaatgagaaagagtgtggagagagtgttgtgaaaagtaaatcatatcttgagggtgaagcaa 4251034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 253 - 328
Target Start/End: Original strand, 14268440 - 14268515
Alignment:
Q  253 gttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcata 328  Q
    ||||||||||| || || ||||||||||||||||| ||| | ||||||||||||||||| ||||||||||||||||    
T  14268440 gttagcactccaacgctgaagtcagtaatggaactaagacatagtgtgtagaaagtgttttgaaaagtgaatcata 14268515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 259 - 362
Target Start/End: Complemental strand, 34573070 - 34572967
Alignment:
Q  259 actccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttata 358  Q
    ||||| || ||||||| |||||| ||||| ||||| |||||||||||||||| |||||||||||||||||| |||||| |||||  |  ||| |||||||    
T  34573070 actccaacgctcaagttagtaatagaactaagaaaaagtgtgtagaaagtgtggtgaaaagtgaatcatacattgagggtgaagttaagtcacccttata 34572971  T
Q  359 tagg 362  Q
    ||||    
T  34572970 tagg 34572967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 250 - 343
Target Start/End: Complemental strand, 9277385 - 9277293
Alignment:
Q  250 cacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagc 343  Q
    ||||||||||||   || |||||||||||| ||||||||||||||||| |||| ||||||| | | ||||||||||||||||||||| ||||||    
T  9277385 cacgttagcactataacgctcaagtcagtattggaactgagaaagagtatgtaaaaagtgtggag-aaagtgaatcataccttgagggtgaagc 9277293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 436
Target Start/End: Complemental strand, 13823459 - 13823279
Alignment:
Q  253 gttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaac 352  Q
    ||||||||||| ||  ||||||||||||||||||||||||| | |   |||||  |||||| |||||||     |||||||||| ||||||||||||| |    
T  13823459 gttagcactccaacgatcaagtcagtaatggaactgagaaaaaatccttagaat-tgttgtaaaaagtgttgtgtaccttgagggtgaagcaagttcacc 13823361  T
Q  353 cttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggtgat 436  Q
     ||||||||  ||||| | |||||||| ||||||| |||||||||||| |||| |||  | |  | ||||||||||||||||||    
T  13823360 tttatatag--gcgcacttggcataaccgtctccgagttatgcggcgtatgataaggagttagagcggacacgtgtagggtgat 13823279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 320
Target Start/End: Complemental strand, 19331799 - 19331695
Alignment:
Q  216 gagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtga 315  Q
    ||||| ||||||||||| | || |||| | || | ||||||| |||||||| || ||||||||||||||||| |||||||| || ||||||||||||||     
T  19331799 gagtcttcgcggtggaacgaaaggtgcttgcaggtacgttagtactccgacgcttaagtcagtaatggaactaagaaagagagtatagaaagtgttgtgt 19331700  T
Q  316 aaagt 320  Q
    |||||    
T  19331699 aaagt 19331695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 249 - 328
Target Start/End: Complemental strand, 25008476 - 25008398
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcata 328  Q
    |||||||| |||||| || |||||||||||||||||| |||||||||||||||| |||||| || | |||||||||||||    
T  25008476 gcacgttaacactccaacgctcaagtcagtaatggaattgagaaagagtgtgtaaaaagtg-tgggtaaagtgaatcata 25008398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 12203683 - 12203631
Alignment:
Q  290 gaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaag 342  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| |||||    
T  12203683 gaaagagtatgtagaaagtgttgtgaaaagtgaatcatactttgagggtgaag 12203631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 327 - 409
Target Start/End: Complemental strand, 14184564 - 14184482
Alignment:
Q  327 taccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagg 409  Q
    |||||||||| ||||||||||||| ||||||||||||||||    ||||||||  ||| ||||||||| ||||| ||||||||    
T  14184564 taccttgagggtgaagcaagttcacccttatataggtgcgctcgtggcataaccatcttcgggttatgaggcgtgtgattagg 14184482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 327 - 409
Target Start/End: Original strand, 18994062 - 18994144
Alignment:
Q  327 taccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagg 409  Q
    |||| ||||| ||||||||||||| ||||||||||| |||| |  |||||||| |||||| | |||||||| |||||||||||    
T  18994062 taccctgaggttgaagcaagttcacccttatataggcgcgcttgtggcataaccgtctccagattatgcggtgtttgattagg 18994144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 22860838 - 22860764
Alignment:
Q  1 aagtgcaatcaatcagaagaataaaattaggagataagtgcaat-caatcataagaatcaaaagggagagaagtg 74  Q
    |||||||||||||||||||||  |||   || || ||||||||| |||||| |||||||||||||||||||||||    
T  22860838 aagtgcaatcaatcagaagaaccaaaaggggggagaagtgcaatgcaatcagaagaatcaaaagggagagaagtg 22860764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 361
Target Start/End: Complemental strand, 12488085 - 12487970
Alignment:
Q  246 catgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaa 345  Q
    |||||||||||||||||  || || |||||| |||| ||||| | | ||||||||||   |||||||||||||||||    ||| |||||| |||  |||    
T  12488085 catgcacgttagcactctaacgctgaagtcaataatagaactaaaatagagtgtgtaagtagtgttgtgaaaagtgatgtgtacattgagggtgatacaa 12487986  T
Q  346 gttcaaccttatatag 361  Q
    ||||| ||||||||||    
T  12487985 gttcacccttatatag 12487970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 254 - 384
Target Start/End: Original strand, 23768203 - 23768333
Alignment:
Q  254 ttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaacc 353  Q
    |||||||||| |  |||||||||||||| ||||||| | | ||||||||  |||||||||| |||||||    |||||  ||| | ||||||||||| ||    
T  23768203 ttagcactccaatgctcaagtcagtaattgaactgaaagatagtgtgtaagaagtgttgtggaaagtgatgtgtacctcaagggtaaagcaagttcaccc 23768302  T
Q  354 ttatataggtgcgcattgggcataactgtct 384  Q
    ||||| || ||| | ||  ||||||||||||    
T  23768303 ttatacagatgcacctttagcataactgtct 23768333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 316 - 362
Target Start/End: Complemental strand, 27772584 - 27772538
Alignment:
Q  316 aaagtgaatcataccttgaggatgaagcaagttcaaccttatatagg 362  Q
    ||||||||||||||||||| | ||||||||| ||| |||||||||||    
T  27772584 aaagtgaatcataccttgaaggtgaagcaaggtcacccttatatagg 27772538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 9291168 - 9291228
Alignment:
Q  1 aagtgcaatcaatcagaagaataaaattaggagataagtgcaatcaatcataagaatcaaa 61  Q
    |||||||||||||||||||||  |||   || || ||||||||||||||| ||||||||||    
T  9291168 aagtgcaatcaatcagaagaaccaaaaggggggagaagtgcaatcaatcagaagaatcaaa 9291228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 246 - 362
Target Start/End: Complemental strand, 17703819 - 17703704
Alignment:
Q  246 catgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaa 345  Q
    |||||||||| || ||| ||| |||||||||| |  |||| |||||| ||||||||| ||||| | | |||||||||||| ||||||  || ||||| ||    
T  17703819 catgcacgttggctctctgactctcaagtcagcataggaaatgagaaggagtgtgtaaaaagtat-gagaaaagtgaatcgtaccttacgggtgaagaaa 17703721  T
Q  346 gttcaaccttatatagg 362  Q
      ||| |||||||||||    
T  17703720 tctcacccttatatagg 17703704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 8e-50; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 249 - 452
Target Start/End: Complemental strand, 32418572 - 32418368
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    |||||| | ||||| ||| ||||||||| | ||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  32418572 gcacgtcaacactctgacgctcaagtcactgatggaacagagaaagagtgtgtagagagtgttgtgaagagtgaatcataccttgaggatgaagcaagtt 32418473  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggat-gatggaggacacgtgtagggtgatgctcgtgcggg 447  Q
    || |||| |||||  | || ||  || ||||||||||||||||||||||||| ||||||||||| | | | |||||||||||||||||| |||| |||||    
T  32418472 cacccttgtatagacgtgcgttaagcttaactgtctccgggttatgcggcgtgtgattagggatggttaggggacacgtgtagggtgatcctcgcgcggg 32418373  T
Q  448 ggcgc 452  Q
    |||||    
T  32418372 ggcgc 32418368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 254 - 451
Target Start/End: Original strand, 25333745 - 25333944
Alignment:
Q  254 ttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaacc 353  Q
    |||| |||||||| ||||||||||||||| |||| ||| ||||||||||||||||||||| ||||||||||||||| |||||  |||||||||||||  |    
T  25333745 ttagtactccgacgctcaagtcagtaatgtaactaagagagagtgtgtagaaagtgttgttaaaagtgaatcatactttgagagtgaagcaagttcactc 25333844  T
Q  354 ttatataggtgcgcattgggcataactgtctcc--gggttatgcggcgtttgattagggatgatggaggacacgtgtagggtgatgctcgtgcgggggcg 451  Q
    ||||||| | | ||||||  |||||| ||||||  |||| ||||||||| ||| |||||| |  ||||||||||||||||||||| ||||||||||||||    
T  25333845 ttatataagcgtgcattgctcataaccgtctccgggggtaatgcggcgtgtgactagggaaggaggaggacacgtgtagggtgatcctcgtgcgggggcg 25333944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 250 - 411
Target Start/End: Complemental strand, 26994691 - 26994530
Alignment:
Q  250 cacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttc 349  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||| || ||||||||| ||    
T  26994691 cacgttagcactccgacgctcaagtcagtaatggaattgagaaagagtgtttagaaggtgttgtgaaaagtgaatcataccttgggggtgaagcaaggtc 26994592  T
Q  350 aaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattaggga 411  Q
    | ||||||||||| |||| ||| |  |||| |||| || ||| |||||||| ||||||||||    
T  26994591 acccttatataggcgcgcgttgagagtaaccgtcttcgagttttgcggcgtgtgattaggga 26994530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 198 - 411
Target Start/End: Original strand, 25537359 - 25537572
Alignment:
Q  198 ttctggtacggaggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagt 297  Q
    |||||| |||| ||||  ||||| ||||||||||| | || |||||| || ||||||||||||||| || ||||||   ||||||||||||||||||| |    
T  25537359 ttctggcacggcggcgaagagtcttcgcggtggaacgaaaggtgcctgcaagcacgttagcactccaacgctcaagattgtaatggaactgagaaagatt 25537458  T
Q  298 gtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcgg 397  Q
    |||||  ||||||||||||||||||   ||||||||||| ||||| ||||||| ||||||||||| |||| |||| || ||| |||||| ||||||| |     
T  25537459 gtgtatgaagtgttgtgaaaagtgatgtataccttgagggtgaagaaagttcacccttatataggcgcgccttggccaaaaccgtctccaggttatgtga 25537558  T
Q  398 cgtttgattaggga 411  Q
    ||| ||||||||||    
T  25537559 cgtgtgattaggga 25537572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 253 - 360
Target Start/End: Original strand, 22903102 - 22903209
Alignment:
Q  253 gttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaac 352  Q
    ||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||  ||| |    
T  22903102 gttagcacttcaacgctcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaaacaatatcacc 22903201  T
Q  353 cttatata 360  Q
    ||||||||    
T  22903202 cttatata 22903209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 250 - 408
Target Start/End: Complemental strand, 27083322 - 27083166
Alignment:
Q  250 cacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttc 349  Q
    |||||||||||||| |||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||  |  ||    
T  27083322 cacgttagcactccaacactcaagtcagtaa-gaaactgtgaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaagttaagtc 27083224  T
Q  350 aaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattag 408  Q
    | ||||  ||||| ||||  || | |||||||||||| |||| |||||||| |||||||    
T  27083223 acccttgcataggcgcgc-gtgagaataactgtctccaggttttgcggcgtgtgattag 27083166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 251 - 436
Target Start/End: Original strand, 22865768 - 22865953
Alignment:
Q  251 acgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttca 350  Q
    |||||||||||  ||| ||||||| |||||||||||||||||| ||||||||  || |||||||||||||||    |||||||||| |||||||||||||    
T  22865768 acgttagcactttgacgctcaagttagtaatggaactgagaaaaagtgtgtaagaaatgttgtgaaaagtgatgtgtaccttgagggtgaagcaagttca 22865867  T
Q  351 accttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggtgat 436  Q
     ||||||||||| | || |||| |||||| || ||||| ||||||| | | |||||||||| |  | | |||||||||||||||||    
T  22865868 cccttatataggcgtgcgttggccataaccgtttccggattatgcgacttgtgattagggacggagcatgacacgtgtagggtgat 22865953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 327 - 456
Target Start/End: Complemental strand, 31202383 - 31202254
Alignment:
Q  327 taccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgt 426  Q
    |||||||||| ||||||||||||| ||||||||||| || | |||| |||||| |||||  ||||||||||||| ||||||||| ||  ||| |||||||    
T  31202383 taccttgagggtgaagcaagttcacccttatataggcgcacgttggtcataaccgtctctaggttatgcggcgtgtgattaggggtggaggaagacacgt 31202284  T
Q  427 gtagggtgatgctcgtgcgggggcgcgctt 456  Q
    ||||||| || |||| ||||||||||||||    
T  31202283 gtagggtaatcctcgcgcgggggcgcgctt 31202254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 239 - 367
Target Start/End: Original strand, 24647283 - 24647411
Alignment:
Q  239 gtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggat 338  Q
    |||| ||||| ||| ||| |||||| || ||||| |||||||||||||||| ||||||||||||  ||||||||||||||||||   ||||||| ||| |    
T  24647283 gtgcatacatacactttaacactccaacgctcaattcagtaatggaactgaaaaagagtgtgtaagaagtgttgtgaaaagtgatgtataccttaagggt 24647382  T
Q  339 gaagcaagttcaaccttatataggtgcgc 367  Q
    |||||||||||| ||||||||||| ||||    
T  24647383 gaagcaagttcacccttatataggcgcgc 24647411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 273 - 411
Target Start/End: Original strand, 20025312 - 20025449
Alignment:
Q  273 gtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgg 372  Q
    ||||| |||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||| || ||| ||||||| ||| ||||  ||     
T  20025312 gtcaggaatgaaactgagaaagagtgtgtagaaagtgttgtgtaaagtgaatcattccttgagggtgaagctaggtcacccttatacaggcgcgc-gtga 20025410  T
Q  373 gcataactgtctccgggttatgcggcgtttgattaggga 411  Q
    | ||||| ||||||||||| || || || ||||||||||    
T  20025411 gaataaccgtctccgggttttgtggtgtgtgattaggga 20025449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 249 - 410
Target Start/End: Complemental strand, 25829074 - 25828913
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    ||||||||||| || ||| ||| ||||| |||||||| ||||||| ||||||||  |||| |||||||||||||    | |||||||| |||| ||||||    
T  25829074 gcacgttagcaatctgacgctctagtcaataatggaattgagaaaaagtgtgtaagaagtattgtgaaaagtgatgtgtcccttgagggtgaaacaagtt 25828975  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattaggg 410  Q
    || || ||||||   |||  |||| |||| | |||||||||||||||||||| |||||||||    
T  25828974 cacccgtatataaaagcgtgttggccatagccgtctccgggttatgcggcgtgtgattaggg 25828913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 250 - 409
Target Start/End: Original strand, 18799786 - 18799944
Alignment:
Q  250 cacgttagcactccgacactcaagtcagtaatggaactgaga-aagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    |||||||||||||||||  ||||||||||||||||||||||| || ||| | ||| | | |||||||||||||     |||||||| |||||||||||||    
T  18799786 cacgttagcactccgacgatcaagtcagtaatggaactgagagaaaagt-tctagga-gagttgtgaaaagtgttgtgtaccttgatgatgaagcaagtt 18799883  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagg 409  Q
    || ||||||||||| ||||    |||||||| ||||| |||||||| ||||| ||||||||    
T  18799884 cacccttatataggcgcgctcgaggcataaccgtctctgggttatgtggcgtgtgattagg 18799944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 249 - 436
Target Start/End: Original strand, 24546352 - 24546534
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaa-gt 347  Q
    ||||||||| ||||| || || ||||||||||||||| |||||    |||| ||  ||||||||||||| ||||    |||||||| | |||||||| ||    
T  24546352 gcacgttagaactcc-acgctaaagtcagtaatggaattgaga----gtgtataagaagtgttgtgaaa-gtgatgtgtaccttgaaggtgaagcaaagt 24546445  T
Q  348 tcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggtgat 436  Q
    ||| ||||||||||| |||| || | |||||| |||||||||||||||||||| |||||||||| |  | | |||||||||||||||||    
T  24546446 tcacccttatataggcgcgcgttagccataaccgtctccgggttatgcggcgtgtgattagggacggagcaagacacgtgtagggtgat 24546534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 205 - 296
Target Start/End: Complemental strand, 31202558 - 31202467
Alignment:
Q  205 acggaggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagag 296  Q
    |||| |||| |||||| |||||||||||  ||||||||||||| | ||||||||| |||||| |||||||||||| ||||||||||| ||||    
T  31202558 acggcggcgatgagtcttcgcggtggaacagaaagtgcctacaggaacgttagcattccgacgctcaagtcagtattggaactgagagagag 31202467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 249 - 343
Target Start/End: Original strand, 8938917 - 8939010
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagc 343  Q
    |||||||| |||||| |  ||| |||||||| |||||||||||||||||||||| |||||| || |||||||||||||||| |||||| ||||||    
T  8938917 gcacgttaacactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgggaaaagtgaatcatacattgagggtgaagc 8939010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 318
Target Start/End: Complemental strand, 19993246 - 19993182
Alignment:
Q  254 ttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaa 318  Q
    |||||| ||| | |||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  19993246 ttagcagtccaatactcaagtcagtaatggaactgagaaagagcgtgttgaaagtgttgtgaaaa 19993182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 330 - 409
Target Start/End: Complemental strand, 25679251 - 25679172
Alignment:
Q  330 cttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagg 409  Q
    ||||||| ||||||||||||| ||||||||||||||||  | |||||||| |||| |||||||||||| || ||||||||    
T  25679251 cttgagggtgaagcaagttcacccttatataggtgcgctcttggcataaccgtcttcgggttatgcggagtatgattagg 25679172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 269 - 341
Target Start/End: Original strand, 34493542 - 34493610
Alignment:
Q  269 tcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaa 341  Q
    ||||||||||||||||| |||  ||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  34493542 tcaagtcagtaatggaattga--aagagtgt--agaaagtgttgtgaaaagtgaatcataccttgagggtgaa 34493610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 11335324 - 11335379
Alignment:
Q  39 tgcaatcaatcataagaatcaaaagggagagaagtgaaatcaatcaagagaatcaa 94  Q
    |||||||||||| ||||||||| |||| |||||||| |||||||||| ||||||||    
T  11335324 tgcaatcaatcagaagaatcaatagggggagaagtgtaatcaatcaaaagaatcaa 11335379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 254 - 300
Target Start/End: Original strand, 19846079 - 19846125
Alignment:
Q  254 ttagcactccgacactcaagtcagtaatggaactgagaaagagtgtg 300  Q
    |||||||||  ||||||||||||||| ||||||| ||||||||||||    
T  19846079 ttagcactctaacactcaagtcagtattggaactaagaaagagtgtg 19846125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 26163637 - 26163691
Alignment:
Q  246 catgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtg 300  Q
    ||||||| |||||||||| || |||||||||| |||| |||| ||||||||||||    
T  26163637 catgcacattagcactccaacgctcaagtcagaaatgaaactaagaaagagtgtg 26163691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 27314854 - 27314808
Alignment:
Q  36 aagtgcaatcaatcataagaatcaaaagggagagaagtgaaatcaat 82  Q
    ||||||||||||||| || |||||||||||||||||||  |||||||    
T  27314854 aagtgcaatcaatcacaaaaatcaaaagggagagaagtataatcaat 27314808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 399
Target Start/End: Original strand, 21213329 - 21213398
Alignment:
Q  330 cttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcg 399  Q
    ||||||| ||||||||||||| ||||||||||| ||||  | || ||||| |||||| |||||| |||||    
T  21213329 cttgagggtgaagcaagttcacccttatataggcgcgctcttggtataaccgtctcctggttatacggcg 21213398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 11335324 - 11335391
Alignment:
Q  4 tgcaatcaatcagaagaataaaattaggagataagtgcaatcaatcataagaatcaaaagggagagaag 72  Q
    ||||||||||||||||||| || |  || || ||||| ||||||||| |||||||||||||| ||||||    
T  11335324 tgcaatcaatcagaagaatcaa-tagggggagaagtgtaatcaatcaaaagaatcaaaagggggagaag 11335391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 247 - 411
Target Start/End: Original strand, 13925 - 14089
Alignment:
Q  247 atgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaag 346  Q
    ||||||||||| ||||| |  ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  13925 atgcacgttagtactccaaagctcaagtcagtaatgaaactgagaaagagtgtgtagaaagtgttgtgagaagtgaatcataccttgagggtgaagcaag 14024  T
Q  347 ttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattaggga 411  Q
     ||| ||||||||||||| |||||||| ||||| | |||| |||| ||||| || ||||||||||    
T  14025 atcacccttatataggtgtgcattgggaataaccgcctccaggttttgcggtgtgtgattaggga 14089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 93; Significance: 5e-45; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 252 - 411
Target Start/End: Complemental strand, 326 - 166
Alignment:
Q  252 cgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtga-atcataccttgaggatgaagcaagttca 350  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||| |   |||||||||| |||||||||||||    
T  326 cgttagcactccgacgctcaagtcagtaatggaactgagaaagagtgtgtaagaagtgttgtgaaaagtgagaatgtaccttgagggtgaagcaagttca 227  T
Q  351 accttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattaggga 411  Q
     |||||| |||| |||| |||| |||||||||||||||||||||| | || ||||||||||    
T  226 cccttatctaggcgcgcgttggtcataactgtctccgggttatgcagtgtgtgattaggga 166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 249 - 409
Target Start/End: Original strand, 6303 - 6463
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    ||||||||||||| |||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||  |||||||||||    
T  6303 gcacgttagcacttcgaagctcaagtcagtaatggaactgagaaatagtgtgtagaaagtgttgtgaaaagtgagtcgtaccttgagcgtgaagcaagtt 6402  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagg 409  Q
    || ||||||||||| || | |||  |||||| |||||||||||| | || || ||||||||    
T  6403 catccttatataggcgcacgttgaacataaccgtctccgggttacgtggtgtgtgattagg 6463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 81; Significance: 7e-38; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 249 - 433
Target Start/End: Original strand, 22891 - 23075
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||  |||||||  ||||||||||||||||||    |||||||||| |||||||||||    
T  22891 gcacgttagcactctgacgctcaagtcagtaatggaactgagaaatcgtgtgtaagaagtgttgtgaaaagtgacgtgtaccttgagggtgaagcaagtt 22990  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggt 433  Q
    || |||||| ||||||||| ||||  |||||  ||||| |||||||||| || |||||||||| |  | |||||| |||||||||    
T  22991 cacccttatgtaggtgcgcgttggtgataaccctctccaggttatgcggtgtgtgattagggacggagcaggacatgtgtagggt 23075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 249 - 384
Target Start/End: Complemental strand, 11001 - 10866
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    ||||||||||||||| || ||||||||| |||||||||||| | ||||||||||  ||||||||||||||||||    |||||||||| |||| ||||||    
T  11001 gcacgttagcactccaacgctcaagtcaataatggaactgaaagagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagggtgaaacaagtt 10902  T
Q  349 caaccttatataggtgcgcattgggcataactgtct 384  Q
    || | ||||||||  ||||||||  |||||| ||||    
T  10901 cacctttatatagacgcgcattgatcataaccgtct 10866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 79; Significance: 1e-36; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 202 - 436
Target Start/End: Original strand, 379674 - 379908
Alignment:
Q  202 ggtacggaggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgt 301  Q
    ||||||| | || |||||| ||||||||||| | || |||| |  | |||||||||||||  |||||| |||||||||||||||||||||||||||||||    
T  379674 ggtacggcgacgatgagtcttcgcggtggaacgaaaggtgcatctaggcacgttagcactttgacactgaagtcagtaatggaactgagaaagagtgtgt 379773  T
Q  302 agaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtt 401  Q
    |  ||||||||||||||||||    |||||||||| ||||||||||||| || |||||||| ||   |||| ||||||  |||| |  |||||||||||     
T  379774 aagaagtgttgtgaaaagtgatgtgtaccttgagggtgaagcaagttcacccgtatataggcgcatgttggtcataaccatctctgaattatgcggcgtg 379873  T
Q  402 tgattagggatgatggaggacacgtgtagggtgat 436  Q
    |||||| ||| |  | |||||||||||||||||||    
T  379874 tgattatggacggagcaggacacgtgtagggtgat 379908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 224 - 367
Target Start/End: Complemental strand, 121122 - 120979
Alignment:
Q  224 gcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaa 323  Q
    ||||||||||| || ||||||| |  |||||||| |||| ||  || |||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  121122 gcggtggaatgaaaggtgcctagaaacacgttagtactctgatgcttaagtcagtaatggaactgagaaagagtgtgtataaagtgttgtgaaaagtgat 121023  T
Q  324 tcataccttgaggatgaagcaagttcaaccttatataggtgcgc 367  Q
       |||||||||| |||||||| |||| ||||||||||| ||||    
T  121022 gtgtaccttgagggtgaagcaaattcacccttatataggcgcgc 120979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 249 - 411
Target Start/End: Complemental strand, 95896 - 95734
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    |||||||| |||| | || ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||  |    
T  95896 gcacgttaccacttcaacgctcaagttagtaatggaactgagaaagagtgcgtagaaagtgttgtgaaaagtgaatcataccttcagggtgaagcaacgt 95797  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattaggga 411  Q
    || |||||||||||  ||| || || ||| ||  ||||| ||| |||||||| ||||||||||    
T  95796 cacccttatataggcacgcgtttggaatatctacctccgagttttgcggcgtgtgattaggga 95734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 250 - 409
Target Start/End: Complemental strand, 68885 - 68728
Alignment:
Q  250 cacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttc 349  Q
    |||||||||||||| || ||||||| |||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||  |||||||| ||    
T  68885 cacgttagcactccaacgctcaagttagtaatggaactgagaaagagtat--agaaagtgttgtgaaaagtgaatcataccttgagggagaagcaaggtc 68788  T
Q  350 aaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagg 409  Q
    | |||||||||||  ||| ||| | ||||||| ||| |||||  ||||| | ||||||||    
T  68787 acccttatataggcacgcgttgagaataactgcctctgggtttcgcggcatgtgattagg 68728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 249 - 413
Target Start/End: Complemental strand, 6946 - 6782
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    |||||||||  ||| ||| |||||||||||| || ||||||||| |||||||||  ||||||||||||||||||    |||||||||| |||| ||||||    
T  6946 gcacgttaggtctctgacgctcaagtcagtattgaaactgagaacgagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagggtgaaacaagtt 6847  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatg 413  Q
    || |||| |||||| || | |||| |||||| |||||| ||||||||||||| ||||||||||||    
T  6846 cacccttgtataggcgcacgttggccataaccgtctccaggttatgcggcgtgtgattagggatg 6782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 249 - 409
Target Start/End: Original strand, 215277 - 215437
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    ||||||||||| ||| || ||||||||||||||| |||||| | ||||||||||  |||||||||||||||||     |||||||||| |||||||||||    
T  215277 gcacgttagcaatccaacgctcaagtcagtaatgaaactgaaagagagtgtgtaagaagtgttgtgaaaagtgttgtgtaccttgagggtgaagcaagtt 215376  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagg 409  Q
    || ||||||||||  | |  |||  ||||||||||||||||||||||||||| ||||||||    
T  215377 catccttatatagccgtgtgttgatcataactgtctccgggttatgcggcgtgtgattagg 215437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 249 - 407
Target Start/End: Original strand, 40801 - 40959
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    ||||||||||||||| || ||||||||||| |||||||||| | |||| |||||| ||||||| ||||||||||    |||||||||| |||||||||||    
T  40801 gcacgttagcactccaacgctcaagtcagtgatggaactgaaagagagagtgtaggaagtgttatgaaaagtgatgtgtaccttgagggtgaagcaagtt 40900  T
Q  349 caaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgatta 407  Q
    || |||| |||||| | ||  ||| |||||| |||||||||||||||||| | ||||||    
T  40901 cacccttttataggcgtgcgctggtcataaccgtctccgggttatgcggcatgtgatta 40959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 253 - 429
Target Start/End: Complemental strand, 73884 - 73708
Alignment:
Q  253 gttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaac 352  Q
    |||||||||| ||| ||||| | |||||||||  ||| |||||||| ||||||||||||||||||||| ||||||||||| ||| ||||||||||||| |    
T  73884 gttagcactctgacgctcaaattagtaatggatttgaaaaagagtgcgtagaaagtgttgtgaaaagtaaatcataccttcagggtgaagcaagttcacc 73785  T
Q  353 cttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgta 429  Q
      |||||||| |||  ||||| ||||| ||||||| ||||||   ||| |||||||||| |||  |||| |||||||    
T  73784 aatatataggcgcgtgttgggtataaccgtctccgagttatgatacgtatgattagggacgatataggaaacgtgta 73708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 202 - 336
Target Start/End: Original strand, 35211 - 35346
Alignment:
Q  202 ggtacggaggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgt 301  Q
    ||||||| ||||||||||| |||  ||| || | || |||| | || |||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  35211 ggtacggcggcgttgagtcttcgtagtgcaacgaaatgtgcttgcaggcacgttagcactctgacactcaagtcagtaacggaactgagaaagagtgtgt 35310  T
Q  302 agaaagtgttgtg-aaaagtgaatcataccttgagg 336  Q
     |||||||||||| ||||||||||||| | ||||||    
T  35311 ggaaagtgttgtgaaaaagtgaatcatcctttgagg 35346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 409
Target Start/End: Complemental strand, 53275 - 53199
Alignment:
Q  333 gaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagg 409  Q
    |||| ||||||||||||| ||||||||||| ||||    |||||||| |||||  |||||||||| |||||||||||    
T  53275 gaggttgaagcaagttcacccttatataggcgcgctcgtggcataaccgtctctaggttatgcggtgtttgattagg 53199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 239 - 451
Target Start/End: Original strand, 11511 - 11719
Alignment:
Q  239 gtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggat 338  Q
    |||||||||  || ||||||||||| || ||||  ||| |||||||||||||||||||||| ||   ||||||||||||||||| |   ||||||||| |    
T  11511 gtgcctacaaccatgttagcactccaacgctcacctcattaatggaactgagaaagagtgtata---agtgttgtgaaaagtga-tgtgaccttgagggt 11606  T
Q  339 gaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggtgatgc 438  Q
    ||| |||||||| ||||||||| ||| ||  ||| ||||||||||| ||||||||||||||| ||||| |||| |  | ||||||| |||| |||||| |    
T  11607 gaaccaagttcacccttatatatgtgtgcgctggtcataactgtcttcgggttatgcggcgtgtgatttgggacggagtaggacacatgtaaggtgattc 11706  T
Q  439 tcgtgcgggggcg 451  Q
    ||| ||| |||||    
T  11707 tcgcgcgagggcg 11719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 204 - 328
Target Start/End: Original strand, 7845 - 7969
Alignment:
Q  204 tacggaggcgttgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtag 303  Q
    ||||| |||| |||||| || |||||||| | || |||| |  | ||||||||||||||  || ||||| ||||||||| || |||||||||||||||||    
T  7845 tacggtggcgatgagtcttcacggtggaaggaaaggtgcatgtaggcacgttagcactctaacgctcaaatcagtaatgcaattgagaaagagtgtgtag 7944  T
Q  304 aaagtgttgtgaaaagtgaatcata 328  Q
    |||||||||||||||||||||||||    
T  7945 aaagtgttgtgaaaagtgaatcata 7969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 222 - 408
Target Start/End: Complemental strand, 20610 - 20424
Alignment:
Q  222 tcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtg 321  Q
    ||||||||||| | || |||| ||||  || |||||||||| ||| ||||||||| ||| ||||||||||||||||||||||||| |||| |||||||||    
T  20610 tcgcggtggaacgaaaggtgcttacaaacatgttagcactctgacgctcaagtcactaaaggaactgagaaagagtgtgtagaaaatgttatgaaaagtg 20511  T
Q  322 aatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattag 408  Q
    |    ||||||| || ||||  || |||| || |||||||| |||| |||| |||| | ||||||| ||||||  |||| |||||||    
T  20510 atgtgtaccttgtgggtgaaataaattcacccatatataggcgcgcgttggtcatagccgtctccgagttatgtagcgtgtgattag 20424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 250 - 452
Target Start/End: Original strand, 5049 - 5246
Alignment:
Q  250 cacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttc 349  Q
    |||||||| ||||||||||||| |||| |     |||||||||||  ||||||  ||||||||||||||||||     ||||||||| ||||||||||||    
T  5049 cacgttagaactccgacactcacgtcatt-----aactgagaaaggttgtgtaagaagtgttgtgaaaagtgacgtgaaccttgagggtgaagcaagttc 5143  T
Q  350 aaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatgatggaggacacgtgtagggtgatgctcgtgcggggg 449  Q
    | ||||||||||||| ||  ||  |||||| |||| ||| ||||||||||| ||||| |||| |  | ||||||| |||| |||||| |||| ||| |||    
T  5144 acccttatataggtgtgcgctgatcataaccgtcttcggcttatgcggcgtgtgatttgggacggagtaggacacatgtaaggtgattctcgcgcgaggg 5243  T

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Target: scaffold0101 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 215 - 449
Target Start/End: Complemental strand, 10838 - 10620
Alignment:
Q  215 tgagtcatcgcggtggaatggaaagtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtg 314  Q
    |||||| ||| ||||||||| || ||| ||  | ||| ||||||||||||||  |||||||||||||||||||||||||||             ||||||    
T  10838 tgagtcttcgtggtggaatgaaaggtgtctgtaggcatgttagcactccgacgttcaagtcagtaatggaactgagaaaga-------------gttgtg 10752  T
Q  315 aaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattagggatga 414  Q
    ||||||||||||| ||| |||| ||||||||||||| | ||||||||||   |||| | |||||| ||||   |||||||| |||| |||||||||        
T  10751 aaaagtgaatcatgcctcgagggtgaagcaagttcacctttatataggt--ccatttgtcataaccgtct-atggttatgccgcgtgtgattaggggcag 10655  T
Q  415 tggaggacacgtgtagggtgatgctcgtgcggggg 449  Q
     |||||||||||||| |||||| ||||||||||||    
T  10654 aggaggacacgtgtatggtgatcctcgtgcggggg 10620  T

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Target: scaffold0013 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 249 - 362
Target Start/End: Complemental strand, 4510 - 4397
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    ||||||||||||||| || ||||||||| ||||| |||||| | |||| |||||  ||||||| |||||| |||    |||||||||| |||||||||||    
T  4510 gcacgttagcactccaacgctcaagtcactaatgaaactgaaagagagagtgtaagaagtgttatgaaaaatgatgtgtaccttgagggtgaagcaagtt 4411  T
Q  349 caaccttatatagg 362  Q
    || |||||||||||    
T  4410 cacccttatatagg 4397  T

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Target: scaffold0092 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 361
Target Start/End: Complemental strand, 21704 - 21592
Alignment:
Q  249 gcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagtt 348  Q
    ||||||||||||||| ||||||||||||||| || |||||| | ||||||| ||  |||||||||| |||||||    |||||||||| |||||||| ||    
T  21704 gcacgttagcactccaacactcaagtcagtattgaaactgaaagagagtgtttaagaagtgttgtggaaagtgatgtgtaccttgagggtgaagcaaatt 21605  T
Q  349 caaccttatatag 361  Q
    || ||||| ||||    
T  21604 cacccttacatag 21592  T

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Target: scaffold0174 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 327
Target Start/End: Complemental strand, 29358 - 29286
Alignment:
Q  253 gttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcat 327  Q
    ||||||||||| || ||||||||||||||| || | || ||||||||  ||||||||||||||||||||||||||    
T  29358 gttagcactccaacgctcaagtcagtaatgaaaataaggaagagtgt--agaaagtgttgtgaaaagtgaatcat 29286  T

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Target: scaffold0174; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 373
Target Start/End: Complemental strand, 24870 - 24819
Alignment:
Q  322 aatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattggg 373  Q
    ||||||||||||||| ||||||||  ||||||||||||||| |||| |||||    
T  24870 aatcataccttgaggttgaagcaatgtcaaccttatataggcgcgcgttggg 24819  T

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Target: scaffold0096 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 409
Target Start/End: Original strand, 42309 - 42413
Alignment:
Q  305 aagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttga 404  Q
    |||||||||||||||||     |||||||||| ||||||||||||| |||||||||||  |||  | |||||||| ||||| | ||||||||| || |||    
T  42309 aagtgttgtgaaaagtgttgtgtaccttgagggtgaagcaagttcacccttatataggcccgctcttggcataaccgtctctgagttatgcggtgtatga 42408  T
Q  405 ttagg 409  Q
    |||||    
T  42409 ttagg 42413  T

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Target: scaffold0126 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 342
Target Start/End: Complemental strand, 31873 - 31818
Alignment:
Q  287 tgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaag 342  Q
    ||||||||| |||||||||||||||||| || ||||||| ||| || |||||||||    
T  31873 tgagaaagattgtgtagaaagtgttgtgtaatgtgaatcgtacatttaggatgaag 31818  T

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Target: scaffold0034 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 254 - 364
Target Start/End: Complemental strand, 18551 - 18442
Alignment:
Q  254 ttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagcaagttcaacc 353  Q
    |||||||||| |||||||||||||||  || | | |||| ||||||||| ||||||| |  |||| |||||||||||||  || |||||| |  ||| ||    
T  18551 ttagcactccaacactcaagtcagtatagggaataagaaggagtgtgtacaaagtgtag-aaaaaatgaatcataccttcgggttgaagctaagtcaccc 18453  T
Q  354 ttatataggtg 364  Q
    |||||||||||    
T  18452 ttatataggtg 18442  T

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Target: scaffold0543 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 408
Target Start/End: Complemental strand, 4956 - 4875
Alignment:
Q  327 taccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattag 408  Q
    |||| |||||||||||||| ||||  ||||||||||| ||| |  ||||||| ||||||||  ||||||||| | |||||||    
T  4956 taccatgaggatgaagcaaattcactcttatataggttcgcttgtggcataattgtctccgatttatgcggcatgtgattag 4875  T

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Target: scaffold0492 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 408
Target Start/End: Complemental strand, 6502 - 6421
Alignment:
Q  327 taccttgaggatgaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgggttatgcggcgtttgattag 408  Q
    |||| |||||||||||||| ||||  ||||||||||| ||| |  ||||||| ||||||||  ||||||||| | |||||||    
T  6502 taccatgaggatgaagcaaattcactcttatataggttcgcttgtggcataattgtctccgatttatgcggcatgtgattag 6421  T

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