View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15205_high_34 (Length: 236)
Name: NF15205_high_34
Description: NF15205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15205_high_34 |
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Alignment Details
Target: chr4 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 9741102 - 9741318
Alignment:
| Q |
5 |
gcatctatgtccgagtccagacccacgaaggttgttaaaattcgaagtatgcatagctatatctttggcgcgattgcatgctttttggcgaatagcagtg |
104 |
Q |
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| T |
9741102 |
gcatctaagtccaagtccagacccacggaggttgttaaaattcgaagtatgcatagctatatctttggcgcgattgcatgctttttggcgaatagcagtg |
9741201 |
T |
|
| Q |
105 |
gtattggctctagtacttaattctttcactccatcacaacacaatgaggatggatctttcacaccacctgttaggtaatccaagcaatcagctagggtta |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9741202 |
gtattggctctagtacttaattctttcactccatcacaacacaatgaggatggatctttcacaccacctgttaggtaatccaagcaatcagctagggtta |
9741301 |
T |
|
| Q |
205 |
ttttcaccagatcacat |
221 |
Q |
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||||||||||||||||| |
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| T |
9741302 |
ttttcaccagatcacat |
9741318 |
T |
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