View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15205_low_29 (Length: 278)
Name: NF15205_low_29
Description: NF15205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15205_low_29 |
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Alignment Details
Target: chr6 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 19 - 268
Target Start/End: Complemental strand, 18030318 - 18030069
Alignment:
| Q |
19 |
gttgaagccacaagctagtgccaaaggcttctccaacacaagaccaccatcaacaaataaagctaaggatgatgtccctatcaagaagaatcccaacaac |
118 |
Q |
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| T |
18030318 |
gttgaagccacaagctagtgcaaaaggcttctccaacacaagaccaccatcaacaaataaagctaaagatgatgtccctatcaagaaaaatcccaacaat |
18030219 |
T |
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| Q |
119 |
aagaatgatgatgatgatattcctaaggaagttatgtatagaataataggtagaatattgtttagtactttagttccaatggcattagggttatcattct |
218 |
Q |
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| T |
18030218 |
aagaatgatgatgatgatattcctaaggaagttatgtatagaataataggtagaatattgtttagtactttagttccaatggcattagggttatcattct |
18030119 |
T |
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| Q |
219 |
tgcatctttatggtgagttaaaggatagacacatatttaatgctcctttg |
268 |
Q |
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| T |
18030118 |
tgcatctttatggtgagttaaaggatagacacatatttaatgctcctttg |
18030069 |
T |
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