View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15206_high_17 (Length: 241)
Name: NF15206_high_17
Description: NF15206
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15206_high_17 |
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Alignment Details
Target: chr5 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 39977217 - 39977439
Alignment:
| Q |
1 |
tgtcacaaacaattgtttgtgacattctaccttgtaaatcacattttgttatactaggaaaagaacaaggttgatgaggtggtttagatgaaagataagc |
100 |
Q |
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| T |
39977217 |
tgtcacaaacaattgtttgtgacattctaccttgtaaatcacattttgttatactaggaaaagaacaaggttgatgaggtggtttagatgaaagataagc |
39977316 |
T |
|
| Q |
101 |
taaattaaaaccataacttttcatttttcttgcagctctatagtatgaatttgcaagtagttggtacaaaaccaaatctacaagccttagaagaaccatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39977317 |
taaattaaaaccataacttttcatttttcttgcagctctatagtatgaatttgcaagtagttggtacaaaaccaaatctacaagccttagaagaaccatt |
39977416 |
T |
|
| Q |
201 |
ggaaacatcatgataaatatttc |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
39977417 |
ggaaacatcatgataaatatttc |
39977439 |
T |
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