View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15206_high_21 (Length: 222)
Name: NF15206_high_21
Description: NF15206
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15206_high_21 |
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Alignment Details
Target: chr4 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 15 - 204
Target Start/End: Original strand, 41378350 - 41378534
Alignment:
| Q |
15 |
tatacttctcactaaaaataacaattgatatagtcgatcatggcgatgaactcatcaaaattagaagggtcgtttctcattttctaacccaattctttac |
114 |
Q |
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|||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41378350 |
tatacttctcactaaaaataacaattgatataattgatcatggcgatgaactcatcaaaattagaagggtcgtttctcattttctaacccaattctttac |
41378449 |
T |
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| Q |
115 |
acagttttggatcattacattaccaattaagaaatagaaaagccgaggtgggtctcatctcatctcatttatcacaattaacacattcat |
204 |
Q |
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| T |
41378450 |
acagttttggatcattacattaccaattaggaaatagaaaagccaaggtggg-----tctcatctcatttatcacaattaacacattcat |
41378534 |
T |
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