View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15206_low_12 (Length: 281)
Name: NF15206_low_12
Description: NF15206
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15206_low_12 |
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Alignment Details
Target: chr1 (Bit Score: 161; Significance: 6e-86; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 99 - 263
Target Start/End: Original strand, 12033191 - 12033355
Alignment:
| Q |
99 |
cctgtgcaatataatgtaatttggaacaagatggtaccttaggttattttgaacaatttgattagacgtgaaattttaatgtggatgaccacctttatgt |
198 |
Q |
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| T |
12033191 |
cctgtgtaatataatgtaatttggaacaagatggtaccttaggttattttgaacaatttgattagacgtgaaattttaatgtggatgaccacctttatgt |
12033290 |
T |
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| Q |
199 |
agtgactagtgctttgataaatcatgatctagagaatgcatgctacacggtttgatagattgacc |
263 |
Q |
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| T |
12033291 |
agtgactagtgctttgataaatcatgatctagagaatgcatgctacacggtttgatagattgacc |
12033355 |
T |
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