View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15208_low_11 (Length: 218)

Name: NF15208_low_11
Description: NF15208
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15208_low_11
NF15208_low_11
[»] chr3 (37 HSPs)
chr3 (16-199)||(4023219-4023402)
chr3 (16-199)||(4372329-4372513)
chr3 (16-199)||(4382070-4382254)
chr3 (16-200)||(20492820-20492997)
chr3 (16-199)||(25433899-25434083)
chr3 (16-199)||(11079-11263)
chr3 (16-199)||(10002517-10002701)
chr3 (16-180)||(2487981-2488147)
chr3 (16-188)||(4781547-4781721)
chr3 (16-199)||(6423096-6423280)
chr3 (16-199)||(8973635-8973819)
chr3 (16-199)||(8984190-8984374)
chr3 (16-158)||(10506987-10507130)
chr3 (16-158)||(10507801-10507944)
chr3 (19-188)||(12387026-12387197)
chr3 (16-188)||(19827331-19827505)
chr3 (16-188)||(20743809-20743983)
chr3 (16-199)||(682901-683085)
chr3 (16-199)||(1684343-1684527)
chr3 (16-199)||(6433523-6433707)
chr3 (16-178)||(9537924-9538088)
chr3 (16-178)||(9548250-9548414)
chr3 (16-160)||(5654756-5654902)
chr3 (16-188)||(51977586-51977760)
chr3 (16-199)||(16334508-16334692)
chr3 (16-188)||(13118545-13118716)
chr3 (16-188)||(14801528-14801700)
chr3 (16-140)||(20293835-20293960)
chr3 (16-158)||(24872354-24872497)
chr3 (19-188)||(24773557-24773728)
chr3 (16-158)||(49386510-49386653)
chr3 (16-118)||(38817133-38817236)
chr3 (33-158)||(24814639-24814765)
chr3 (16-158)||(11459928-11460071)
chr3 (86-199)||(16697898-16698011)
chr3 (23-133)||(23503022-23503133)
chr3 (16-156)||(11043844-11043984)
[»] chr1 (40 HSPs)
chr1 (16-199)||(13965836-13966019)
chr1 (17-199)||(2369510-2369693)
chr1 (16-199)||(18384133-18384317)
chr1 (16-188)||(12420198-12420372)
chr1 (16-189)||(2117644-2117819)
chr1 (16-199)||(30548712-30548897)
chr1 (16-199)||(37013141-37013326)
chr1 (16-188)||(20315220-20315394)
chr1 (16-200)||(25020257-25020442)
chr1 (16-188)||(27066869-27067043)
chr1 (19-199)||(42035006-42035189)
chr1 (16-188)||(25868135-25868309)
chr1 (16-199)||(16155672-16155856)
chr1 (16-140)||(49336538-49336663)
chr1 (16-186)||(21459417-21459589)
chr1 (16-188)||(18096017-18096191)
chr1 (16-188)||(20316789-20316963)
chr1 (16-188)||(20327271-20327445)
chr1 (16-158)||(1973814-1973957)
chr1 (16-158)||(1988601-1988744)
chr1 (20-180)||(41542935-41543097)
chr1 (35-199)||(21904416-21904581)
chr1 (16-135)||(25038548-25038668)
chr1 (16-135)||(25043760-25043880)
chr1 (16-140)||(4951219-4951344)
chr1 (16-135)||(22961693-22961813)
chr1 (15-105)||(25822346-25822437)
chr1 (20-158)||(34823761-34823900)
chr1 (23-160)||(22957253-22957390)
chr1 (16-158)||(21820591-21820733)
chr1 (16-99)||(26192276-26192360)
chr1 (16-118)||(21793541-21793644)
chr1 (16-158)||(52948827-52948970)
chr1 (16-110)||(8541050-8541145)
chr1 (16-110)||(8606289-8606384)
chr1 (86-188)||(19735662-19735765)
chr1 (35-135)||(34000674-34000774)
chr1 (16-83)||(19747443-19747511)
chr1 (52-133)||(22959169-22959252)
chr1 (16-61)||(22892368-22892413)
[»] chr7 (52 HSPs)
chr7 (16-199)||(15374494-15374678)
chr7 (16-199)||(14946900-14947084)
chr7 (16-199)||(43984449-43984633)
chr7 (16-199)||(27989883-27990067)
chr7 (16-199)||(13130626-13130810)
chr7 (16-187)||(24539564-24539737)
chr7 (16-199)||(42621881-42622065)
chr7 (16-188)||(19800889-19801063)
chr7 (16-199)||(11625453-11625637)
chr7 (16-199)||(46497903-46498087)
chr7 (16-199)||(46508515-46508699)
chr7 (16-158)||(9007734-9007877)
chr7 (16-199)||(5927924-5928108)
chr7 (16-199)||(6535273-6535457)
chr7 (16-199)||(6545594-6545778)
chr7 (16-199)||(8501838-8502022)
chr7 (16-199)||(8512308-8512492)
chr7 (16-199)||(16131003-16131187)
chr7 (16-199)||(32109606-32109790)
chr7 (16-199)||(44898087-44898271)
chr7 (16-199)||(44908512-44908696)
chr7 (16-199)||(9534327-9534511)
chr7 (16-181)||(16141569-16141736)
chr7 (16-188)||(19586536-19586710)
chr7 (16-188)||(45554346-45554520)
chr7 (16-199)||(5380901-5381085)
chr7 (16-199)||(5390539-5390723)
chr7 (16-199)||(26304344-26304528)
chr7 (16-199)||(26307904-26308088)
chr7 (16-199)||(26362290-26362474)
chr7 (16-199)||(32099169-32099353)
chr7 (16-199)||(9544610-9544794)
chr7 (16-146)||(2991030-2991161)
chr7 (16-158)||(15987794-15987937)
chr7 (16-188)||(10416773-10416945)
chr7 (16-158)||(31825508-31825651)
chr7 (16-188)||(8340997-8341169)
chr7 (16-158)||(5614582-5614725)
chr7 (16-158)||(14247631-14247774)
chr7 (16-158)||(41028389-41028532)
chr7 (16-158)||(12826507-12826650)
chr7 (16-158)||(13284836-13284979)
chr7 (16-176)||(7018496-7018677)
chr7 (19-132)||(12492250-12492364)
chr7 (16-120)||(7033934-7034039)
chr7 (16-132)||(12516052-12516169)
chr7 (16-140)||(12574972-12575097)
chr7 (114-176)||(7033854-7033916)
chr7 (16-135)||(12088115-12088235)
chr7 (16-118)||(12770872-12770973)
chr7 (16-158)||(42596172-42596315)
chr7 (16-61)||(40703346-40703391)
[»] chr8 (27 HSPs)
chr8 (16-199)||(3988301-3988485)
chr8 (16-199)||(13675549-13675733)
chr8 (16-199)||(21986837-21987021)
chr8 (16-199)||(21996371-21996555)
chr8 (16-199)||(12900396-12900580)
chr8 (16-199)||(21461894-21462078)
chr8 (16-188)||(31998339-31998513)
chr8 (16-186)||(33773228-33773400)
chr8 (16-188)||(14893133-14893307)
chr8 (16-188)||(31990750-31990924)
chr8 (16-188)||(14880783-14880957)
chr8 (16-199)||(9324123-9324306)
chr8 (16-199)||(21201922-21202106)
chr8 (16-199)||(21212338-21212522)
chr8 (16-199)||(21335087-21335271)
chr8 (101-199)||(16582828-16582926)
chr8 (19-187)||(20529970-20530140)
chr8 (20-135)||(11429621-11429737)
chr8 (16-158)||(26361468-26361611)
chr8 (16-149)||(2689419-2689553)
chr8 (23-158)||(14438220-14438356)
chr8 (62-141)||(17269568-17269647)
chr8 (16-158)||(18537440-18537582)
chr8 (16-158)||(12840586-12840726)
chr8 (16-103)||(6760607-6760696)
chr8 (16-83)||(23014235-23014303)
chr8 (113-188)||(8668833-8668908)
[»] chr4 (45 HSPs)
chr4 (16-199)||(16250235-16250419)
chr4 (16-199)||(5291999-5292183)
chr4 (16-199)||(5301658-5301842)
chr4 (16-199)||(21847075-21847259)
chr4 (16-199)||(21856667-21856851)
chr4 (16-199)||(21902938-21903122)
chr4 (16-199)||(21912530-21912714)
chr4 (16-199)||(27679664-27679848)
chr4 (16-199)||(27689319-27689503)
chr4 (16-199)||(3486538-3486722)
chr4 (16-199)||(3495861-3496045)
chr4 (16-198)||(15670869-15671052)
chr4 (16-199)||(10422572-10422756)
chr4 (21-199)||(7842948-7843127)
chr4 (16-199)||(7845828-7846012)
chr4 (16-199)||(16254025-16254208)
chr4 (16-188)||(17827096-17827270)
chr4 (16-188)||(17836487-17836661)
chr4 (16-188)||(2830775-2830949)
chr4 (16-188)||(16630322-16630496)
chr4 (16-188)||(30652456-30652629)
chr4 (16-158)||(13792164-13792307)
chr4 (16-180)||(13401894-13402059)
chr4 (16-188)||(16059160-16059333)
chr4 (16-181)||(17983977-17984144)
chr4 (16-181)||(18104527-18104694)
chr4 (16-199)||(6693007-6693191)
chr4 (16-199)||(6703413-6703597)
chr4 (16-199)||(16081368-16081552)
chr4 (16-199)||(17144519-17144704)
chr4 (16-199)||(40922632-40922816)
chr4 (16-140)||(53945259-53945384)
chr4 (16-158)||(518819-518962)
chr4 (16-158)||(521325-521468)
chr4 (16-188)||(44889808-44889982)
chr4 (17-175)||(14599769-14599928)
chr4 (16-158)||(4837128-4837272)
chr4 (16-158)||(6404957-6405100)
chr4 (16-188)||(41527090-41527260)
chr4 (16-140)||(16210121-16210245)
chr4 (16-132)||(8841973-8842090)
chr4 (16-158)||(17420433-17420574)
chr4 (16-118)||(16398038-16398141)
chr4 (16-158)||(26459209-26459352)
chr4 (19-115)||(17162382-17162479)
[»] chr5 (41 HSPs)
chr5 (16-199)||(18208545-18208729)
chr5 (16-199)||(18217883-18218067)
chr5 (16-199)||(21682976-21683159)
chr5 (16-199)||(21754324-21754508)
chr5 (16-199)||(21763611-21763795)
chr5 (16-199)||(31917601-31917785)
chr5 (17-199)||(27578439-27578622)
chr5 (16-188)||(30942582-30942756)
chr5 (16-188)||(30952004-30952178)
chr5 (16-188)||(37646624-37646798)
chr5 (16-188)||(4037272-4037446)
chr5 (16-188)||(19886981-19887155)
chr5 (16-188)||(22172545-22172719)
chr5 (16-188)||(34129782-34129956)
chr5 (16-188)||(37537513-37537687)
chr5 (16-199)||(18362066-18362250)
chr5 (16-199)||(18391023-18391207)
chr5 (16-158)||(36317236-36317379)
chr5 (16-188)||(27273474-27273648)
chr5 (16-199)||(26191111-26191295)
chr5 (16-199)||(26201693-26201877)
chr5 (16-199)||(33940109-33940293)
chr5 (16-199)||(33950509-33950693)
chr5 (16-158)||(37818388-37818532)
chr5 (16-188)||(13570972-13571146)
chr5 (16-160)||(32071229-32071375)
chr5 (16-199)||(8764453-8764637)
chr5 (16-199)||(11410197-11410381)
chr5 (16-140)||(19781392-19781517)
chr5 (16-158)||(23376088-23376231)
chr5 (19-199)||(27412940-27413121)
chr5 (16-188)||(37298107-37298281)
chr5 (16-158)||(20948641-20948784)
chr5 (16-158)||(20959010-20959153)
chr5 (17-199)||(42089790-42089972)
chr5 (16-188)||(20808026-20808201)
chr5 (16-118)||(20897746-20897849)
chr5 (16-140)||(22245400-22245525)
chr5 (17-140)||(204808-204932)
chr5 (16-99)||(19547631-19547715)
chr5 (16-97)||(20904008-20904090)
[»] chr2 (39 HSPs)
chr2 (16-199)||(4459167-4459351)
chr2 (16-199)||(4468792-4468976)
chr2 (16-199)||(5345720-5345904)
chr2 (16-199)||(5335868-5336052)
chr2 (16-199)||(32935793-32935977)
chr2 (16-199)||(29424142-29424327)
chr2 (16-199)||(37862121-37862304)
chr2 (16-199)||(24695591-24695772)
chr2 (16-188)||(45191626-45191800)
chr2 (16-199)||(38929514-38929698)
chr2 (16-180)||(38956875-38957040)
chr2 (16-188)||(3604662-3604836)
chr2 (16-163)||(45015502-45015650)
chr2 (16-188)||(16901236-16901410)
chr2 (16-188)||(16994627-16994801)
chr2 (16-181)||(2997720-2997887)
chr2 (16-199)||(9501766-9501950)
chr2 (16-199)||(9513132-9513316)
chr2 (16-199)||(18652007-18652191)
chr2 (16-199)||(18664125-18664309)
chr2 (16-160)||(17489479-17489625)
chr2 (16-188)||(22678766-22678940)
chr2 (16-158)||(27159051-27159194)
chr2 (16-158)||(27169399-27169542)
chr2 (16-188)||(22671627-22671800)
chr2 (16-140)||(28451116-28451241)
chr2 (16-158)||(69220-69363)
chr2 (16-188)||(44637672-44637846)
chr2 (16-158)||(22902929-22903072)
chr2 (16-158)||(22907922-22908065)
chr2 (16-185)||(21110004-21110170)
chr2 (16-158)||(19343105-19343248)
chr2 (16-149)||(41025962-41026095)
chr2 (16-158)||(40408067-40408209)
chr2 (16-81)||(12571386-12571452)
chr2 (86-188)||(12580178-12580281)
chr2 (19-158)||(38461292-38461430)
chr2 (16-81)||(15474683-15474749)
chr2 (16-158)||(22146568-22146707)
[»] scaffold0591 (2 HSPs)
scaffold0591 (16-199)||(3-187)
scaffold0591 (16-158)||(1739-1882)
[»] scaffold0068 (1 HSPs)
scaffold0068 (24-199)||(30751-30926)
[»] chr6 (40 HSPs)
chr6 (16-199)||(29541235-29541419)
chr6 (16-200)||(18202336-18202521)
chr6 (16-199)||(20968631-20968815)
chr6 (16-188)||(12988957-12989131)
chr6 (16-158)||(790153-790296)
chr6 (16-188)||(26019508-26019682)
chr6 (16-188)||(1597948-1598121)
chr6 (16-199)||(3286635-3286819)
chr6 (16-199)||(16898735-16898919)
chr6 (16-199)||(16909388-16909572)
chr6 (16-199)||(18160850-18161034)
chr6 (16-199)||(18170662-18170846)
chr6 (16-199)||(20913071-20913255)
chr6 (16-199)||(12455842-12456026)
chr6 (16-199)||(14792391-14792575)
chr6 (16-199)||(24921086-24921270)
chr6 (16-199)||(24930122-24930306)
chr6 (16-179)||(30656987-30657152)
chr6 (16-199)||(31358350-31358534)
chr6 (16-199)||(31368080-31368264)
chr6 (16-158)||(22222611-22222754)
chr6 (16-158)||(22248446-22248589)
chr6 (16-140)||(16322111-16322236)
chr6 (16-140)||(16334259-16334384)
chr6 (16-140)||(18705472-18705597)
chr6 (16-140)||(18711407-18711532)
chr6 (16-136)||(17826641-17826762)
chr6 (16-158)||(19363858-19364001)
chr6 (16-188)||(7753822-7753996)
chr6 (22-158)||(18335709-18335845)
chr6 (16-135)||(26169204-26169322)
chr6 (20-158)||(15504229-15504368)
chr6 (16-158)||(34766147-34766285)
chr6 (16-155)||(24692600-24692737)
chr6 (63-188)||(24502678-24502802)
chr6 (16-134)||(9034205-9034322)
chr6 (16-158)||(8562431-8562574)
chr6 (16-130)||(27786666-27786779)
chr6 (24-158)||(28093420-28093554)
chr6 (71-135)||(26169438-26169500)
[»] scaffold0118 (1 HSPs)
scaffold0118 (16-188)||(8926-9100)
[»] scaffold0106 (1 HSPs)
scaffold0106 (16-199)||(101-285)
[»] scaffold0706 (1 HSPs)
scaffold0706 (17-199)||(1052-1235)
[»] scaffold0611 (1 HSPs)
scaffold0611 (16-199)||(8900-9084)
[»] scaffold0043 (1 HSPs)
scaffold0043 (19-199)||(91973-92154)
[»] scaffold0014 (2 HSPs)
scaffold0014 (16-199)||(147496-147680)
scaffold0014 (16-199)||(233084-233268)
[»] scaffold0172 (1 HSPs)
scaffold0172 (16-195)||(150-328)
[»] scaffold0047 (1 HSPs)
scaffold0047 (16-199)||(73821-74006)
[»] scaffold0002 (1 HSPs)
scaffold0002 (16-180)||(394972-395138)
[»] scaffold0254 (1 HSPs)
scaffold0254 (16-199)||(6938-7122)
[»] scaffold0234 (1 HSPs)
scaffold0234 (16-180)||(20167-20333)
[»] scaffold0141 (1 HSPs)
scaffold0141 (16-140)||(19560-19685)
[»] scaffold0016 (1 HSPs)
scaffold0016 (16-158)||(16234-16377)
[»] scaffold0058 (2 HSPs)
scaffold0058 (16-188)||(49322-49496)
scaffold0058 (16-188)||(28118-28292)
[»] scaffold0031 (1 HSPs)
scaffold0031 (16-188)||(110873-111047)
[»] scaffold0308 (1 HSPs)
scaffold0308 (16-158)||(19757-19900)
[»] scaffold0005 (2 HSPs)
scaffold0005 (17-175)||(217450-217609)
scaffold0005 (16-199)||(309115-309299)
[»] scaffold0553 (1 HSPs)
scaffold0553 (16-132)||(1-119)
[»] scaffold0277 (1 HSPs)
scaffold0277 (16-199)||(18458-18642)
[»] scaffold0034 (1 HSPs)
scaffold0034 (16-188)||(8211-8385)
[»] scaffold0142 (1 HSPs)
scaffold0142 (20-156)||(27913-28050)
[»] scaffold0811 (1 HSPs)
scaffold0811 (16-128)||(2471-2584)
[»] scaffold0121 (1 HSPs)
scaffold0121 (16-158)||(6145-6287)
[»] scaffold0313 (3 HSPs)
scaffold0313 (16-158)||(6559-6697)
scaffold0313 (16-158)||(10341-10479)
scaffold0313 (16-61)||(20716-20761)
[»] scaffold0015 (2 HSPs)
scaffold0015 (23-160)||(196525-196662)
scaffold0015 (62-133)||(189943-190015)
[»] scaffold0265 (1 HSPs)
scaffold0265 (16-158)||(12076-12218)
[»] scaffold0059 (1 HSPs)
scaffold0059 (16-158)||(39704-39847)
[»] scaffold0343 (1 HSPs)
scaffold0343 (85-199)||(15025-15139)
[»] scaffold0086 (1 HSPs)
scaffold0086 (16-97)||(55041-55123)
[»] scaffold0018 (3 HSPs)
scaffold0018 (16-150)||(55431-55562)
scaffold0018 (16-150)||(59380-59511)
scaffold0018 (16-150)||(60808-60939)
[»] scaffold0908 (1 HSPs)
scaffold0908 (113-188)||(9-84)
[»] scaffold0057 (1 HSPs)
scaffold0057 (21-125)||(67013-67118)
[»] scaffold0360 (1 HSPs)
scaffold0360 (16-157)||(1058-1201)
[»] scaffold0873 (1 HSPs)
scaffold0873 (148-199)||(4892-4943)
[»] scaffold0764 (1 HSPs)
scaffold0764 (16-61)||(5-50)


Alignment Details
Target: chr3 (Bit Score: 172; Significance: 1e-92; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 4023402 - 4023219
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtgggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttc 115  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4023402 gagaggttatctcaaatatcatagtggaaactctctcaagattgtgggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttc 4023303  T
Q  116 tctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4023302 tctcttccctatactctttaattatagtatacacaacacacacttgcacatttactttattaaacagtttttgtgtatgaactt 4023219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 4372329 - 4372513
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  4372329 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactagcccacattgggtgaaccactataattctctgtgtgttcttt 4372428  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| |||||||||||||    
T  4372429 ctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaactgtttatgtgtatgaactt 4372513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 4382070 - 4382254
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  4382070 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactagcccacattgggtgaaccactataattctctgtgtgttcttt 4382169  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| |||||||||||||    
T  4382170 ctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaactgtttatgtgtatgaactt 4382254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 16 - 200
Target Start/End: Original strand, 20492820 - 20492997
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||| ||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20492820 gagaggttttctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatctctgtgtgttcttt 20492919  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaacttt 200  Q
    ||||||| ||||||||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||||||    
T  20492920 ctctctttcctatactctttaattacagtatacacaacacacac--------ttactttattaaactgtttttgtgtatgaacttt 20492997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 25433899 - 25434083
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||| ||| |||||||||| |||||    
T  25433899 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactagcccacattgggtgaaccactttaattctctgtgtgctcttt 25433998  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |  ||||| ||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||    
T  25433999 ccttcttctctatactctttaactacagtatacacaacacacacttgcacatttaccttattaaacagtttttgtttatgaactt 25434083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 11263 - 11079
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| | |||||||||||||||| |||||||||| ||||||||||| ||||| |||| ||||||||||||| ||||||||||||||||    
T  11263 gagaggttatctcaagcaccatagtggaaactctcacaagattgtgaggagtggactagcccacgttgggtgaaccactataattctctgtgtgttcttt 11164  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |  ||||| ||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||    
T  11163 ccttcttctctatactttttaattatagtatacacaacacacacttgcacatttactttattaaattgtttttgtgtatgaactt 11079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 10002701 - 10002517
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||| ||||| |||| ||||||||||||| ||||||||||||||||    
T  10002701 gagaggttatctcaagtaccatagtggaaactctcacaagattgtgaggagtggactagcccacgttgggtgaaccactataattctctgtgtgttcttt 10002602  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |  ||||| |||||||||||||||| |||  |||||||||||||||||| |||||||||||||| | |||| ||  |||||||||    
T  10002601 ccttcttctctatactctttaattatagttcacacaacacacacttgcacatttactttattaatctgtttctgcatatgaactt 10002517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 180
Target Start/End: Complemental strand, 2488147 - 2487981
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| ||| |||||||  |    
T  2488147 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattggatgaaccactataaattctccgtgtgttgat 2488048  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaac 180  Q
    |||||||||||||||||||||| |||| | |||||||||||||||   || ||||||||||||||||    
T  2488047 tctctcttccctatactctttacttactgcatacacaacacacacaaacacatttactttattaaac 2487981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 4781721 - 4781547
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||| ||| |||||||  |    
T  4781721 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaattctccgtgtgttgat 4781622  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||| | |||||||||||||||   || |||||||||||||||| |||||||    
T  4781621 tctctcttccctatactctttacttactgcatacacaacacacacaaacacatttactttattaaactgtttttg 4781547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 6423096 - 6423280
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  6423096 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 6423195  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||||||  |||||| |||||||||    
T  6423196 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaaaca-attttgtttatgaactt 6423280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 8973635 - 8973819
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  8973635 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 8973734  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||||||  |||||| |||||||||    
T  8973735 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaaaca-attttgtttatgaactt 8973819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 8984190 - 8984374
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  8984190 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 8984289  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||||||  |||||| |||||||||    
T  8984290 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaaaca-attttgtttatgaactt 8984374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 10507130 - 10506987
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||| ||||||||||| |||||||||| ||||||| ||||||||| ||||||||||||    
T  10507130 gagaggttatctcaagcatcatagtggaaacactcacaagattgtgaggagtggactagcccacattgggtgaaccattataaatctttgtgtgttcttt 10507031  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
    ||||||| | |||||||||||||| |||||||||| ||||||||    
T  10507030 ctctctttcttatactctttaatttcagtatacaccacacacac 10506987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 10507944 - 10507801
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||| ||||||||||| |||||||||| ||||||| ||||||||| ||||||||||||    
T  10507944 gagaggttatctcaagcatcatagtggaaacactcacaagattgtgaggagtggactagcccacattgggtgaaccattataaatctttgtgtgttcttt 10507845  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
    ||||||| | |||||||||||||| |||||||||| ||||||||    
T  10507844 ctctctttcttatactctttaatttcagtatacaccacacacac 10507801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 12387026 - 12387197
Alignment:
Q  19 aggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttctc 117  Q
    ||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||| ||  |||||    
T  12387026 aggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacgttgggtgaaccactataaatctctgtgtttttattctc 12387125  T
Q  118 tcttccctatactctttaattacagtatacac-aacacacacttgcatatttactttattaaacagtttttg 188  Q
    ||||||||||||||||||||||| | | |||| |||||||||   || |||||||||| ||||| |||||||    
T  12387126 tcttccctatactctttaattactgcaaacacaaacacacacaaacacatttactttagtaaactgtttttg 12387197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 19827505 - 19827331
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||||  |    
T  19827505 gagaggttctctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggcgaaccactataaattctctgtgtgtttat 19827406  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    ||||||||||||||||||||||||||  | |||||||||||||||   || ||||||  |||||||| |||||||    
T  19827405 tctctcttccctatactctttaattattgcatacacaacacacacaaacacatttaccatattaaactgtttttg 19827331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 20743983 - 20743809
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatc-tctgtgtgttctt 113  Q
    |||||||||||||||| ||||||||| |||||||| |||||||||| ||||||||||||||||||||||  ||||||||||||||  ||||||||||  |    
T  20743983 gagaggttatctcaagcatcatagtgaaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaattgtctgtgtgttgat 20743884  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    | |||||||||||||||||||| |||| | |||||||||||||||   || |||||||||||||||| |||||||    
T  20743883 tttctcttccctatactctttacttactgcatacacaacacacacaaacacatttactttattaaactgtttttg 20743809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 683085 - 682901
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  683085 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 682986  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  682985 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 682901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 1684527 - 1684343
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  1684527 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 1684428  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||| ||||||  |||||| |||||||||    
T  1684427 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttagtaaaca-attttgtttatgaactt 1684343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 6433523 - 6433707
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| || ||||||| ||||||||||||| ||| ||||||||||||    
T  6433523 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcctacattgggtgaaccactataactctttgtgtgttcttt 6433622  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||||||  |||||| |||||||||    
T  6433623 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaaaca-attttgtttatgaactt 6433707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 178
Target Start/End: Original strand, 9537924 - 9538088
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  9537924 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 9538023  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaa 178  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | |||||||||||    
T  9538024 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaa 9538088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 178
Target Start/End: Original strand, 9548250 - 9548414
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  9548250 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 9548349  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaa 178  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | |||||||||||    
T  9548350 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaa 9548414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 16 - 160
Target Start/End: Complemental strand, 5654902 - 5654756
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  5654902 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 5654803  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacactt 160  Q
    || ||||| |||||||| |||| ||||||||||||||||||||||||    
T  5654802 ctttcttctctatactcttttatttacagtatacacaacacacactt 5654756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 51977760 - 51977586
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaa-tctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| | |||||||| |||||| |||||||||||||||  ||||||||||||| ||||||||||||  |    
T  51977760 gagaggttatctcaagcatcatagtggaaactctcactagattgtgaggagtgaactaacccacattgggggaaccactataaaatctctgtgtgttgat 51977661  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||| | |||||||||||||||   || |||||||| ||||||  |||||||    
T  51977660 tctctcttccctatactctttatttactgcatacacaacacacacaaacacatttacttcattaaattgtttttg 51977586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 16334692 - 16334508
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  16334692 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 16334593  T
Q  115 ctctcttccctatactct-ttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |  ||||| ||||||||| ||| |||||||||||||||||||||||| ||  | ||| ||||||||||  |||||| |||||||||    
T  16334592 ccttcttctctatactctcttatttacagtatacacaacacacacttacacttataccttattaaaca-attttgtttatgaactt 16334508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 13118716 - 13118545
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |   | ||||  ||    
T  13118716 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaat-ttgctatgttgatt 13118618  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    ||||||| ||||||||||||| |||| | |||||||||||||||   || |||||||||||||||| |||||||    
T  13118617 ctctctt-cctatactctttacttactgcatacacaacacacacaaacacatttactttattaaactgtttttg 13118545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 14801700 - 14801528
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||| ||| || |||||||  ||    
T  14801700 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactattaatttccgtgtgttgatt 14801601  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    ||||||||||||||||||||| |||| | | |||||| ||||||   || ||||||||| |||||| |||||||    
T  14801600 ctctcttccctatactctttacttactgcaaacacaa-acacacaaacacatttactttgttaaactgtttttg 14801528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 20293835 - 20293960
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| ||||| |||| ||||||||||||||| ||||||||||  ||    
T  20293835 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactagcccacgttgggtgaaccactataaatttctgtgtgttgatt 20293934  T
Q  115 ctctcttccctatactctttaattac 140  Q
    ||||||||||||||||||||| ||||    
T  20293935 ctctcttccctatactctttacttac 20293960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 24872497 - 24872354
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||| ||||||||||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||     
T  24872497 gagaagttatctcaagcatcatagtggaaaatctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttctgtgtgttcttc 24872398  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     ||||||  || |||| |||| |||||||| |||||||||||||    
T  24872397 ttctcttttctttactatttacttacagtaaacacaacacacac 24872354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 24773557 - 24773728
Alignment:
Q  19 aggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttctc 117  Q
    ||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||| | ||||||||  |||||    
T  24773557 aggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaatttttgtgtgttgattctc 24773656  T
Q  118 tcttccctatactctttaattacagtatacac-aacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||| ||||||||||||| |||  | | |||| |||||||||   || ||||||||| |||||| |||||||    
T  24773657 tctttcctatactctttatttattgcaaacacaaacacacacaaacacatttactttgttaaactgtttttg 24773728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 49386653 - 49386510
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||  ||||||||||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||     
T  49386653 gagaagttatctcaaacatcatagtggaaaatctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttctgtgtgttcttc 49386554  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     ||||||| || |||| ||||  ||||||| |||||||||||||    
T  49386553 ttctcttctctttactatttacctacagtaaacacaacacacac 49386510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 38817236 - 38817133
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggga-gtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||  |||||||||||||||||| |||||||||| || ||||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  38817236 gagaagttatctcaaacatcatagtggaaactctcacaagattgtgagaagtggactaacccacattgggtgaaccactataactctttgtgtgttcttt 38817137  T
Q  115 ctct 118  Q
    ||||    
T  38817136 ctct 38817133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 33 - 158
Target Start/End: Original strand, 24814639 - 24814765
Alignment:
Q  33 atcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttctttctctcttccctatactc 131  Q
    ||||||||||||| |||| |||||||||| | |||||||||||||||||||| |||||||||||||||   |||||||||||  ||||||| || |||||    
T  24814639 atcatagtggaaaatctcacaagattgtgagtagtggactaacccacattgggtgaaccactataaattcatgtgtgttcttcttctcttctctttactc 24814738  T
Q  132 tttaattacagtatacacaacacacac 158  Q
    |||| |||||||| |||| ||||||||    
T  24814739 tttacttacagtaaacaccacacacac 24814765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 11459928 - 11460071
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggga-gtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||  ||||||||| ||||||||  ||||||||| || ||||||||||||||| ||| |||||||||||||| || |||||||||||     
T  11459928 gagaggttatctcaaacatcatagtgaaaactctcataagattgtgagaagtggactaacccacaatgggtgaaccactataaa-ctttgtgtgttcttc 11460026  T
Q  115 ctctcttccctatactctttaattac-agtatacacaacacacac 158  Q
     |||||||| ||||||||||| || | ||||||||| ||||||||    
T  11460027 ttctcttccttatactctttattttcaagtatacactacacacac 11460071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 16698011 - 16697898
Alignment:
Q  86 gaaccactataaatctctgtgtgttctttctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtt 184  Q
    |||||||||||| ||| |||||||||||||| ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||||||  |    
T  16698011 gaaccactataactctttgtgtgttctttctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaaaca-at 16697913  T
Q  185 tttgtgtatgaactt 199  Q
    ||||| |||||||||    
T  16697912 tttgtttatgaactt 16697898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 23 - 133
Target Start/End: Complemental strand, 23503133 - 23503022
Alignment:
Q  23 tatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttctctctt 121  Q
    ||||| ||| ||||||||| |||||||| |||||||||| |||||||||||||||||||||| ||||||||||||| | ||| |||||| |   ||||||    
T  23503133 tatcttaagcatcatagtgaaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataactttctttgtgttttccttctctt 23503034  T
Q  122 ccctatactctt 133  Q
    || |||||||||    
T  23503033 ccatatactctt 23503022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 156
Target Start/End: Complemental strand, 11043984 - 11043844
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| || |||||| ||| ||||  ||||||||| |||||||| || |||| ||||| ||||||| ||||||| | ||||||| |||     
T  11043984 gagaggttatctcaagcattatagtgaaaattctcataagattgtgaggagtggattagcccatattgggtgaaccattataaat-tatgtgtgtccttc 11043886  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacac 156  Q
     |||||||| || |||||||| |||||||| ||| |||||||    
T  11043885 ttctcttccatacactctttacttacagtaaacaaaacacac 11043844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 168; Significance: 3e-90; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 13965836 - 13966019
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtgggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttc 115  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  13965836 gagaggttatctcaattatcatagtggaaactctctcaagattgtgggagtggactaacccacattggctgaaccactataaatctttgtgtgttctttc 13965935  T
Q  116 tctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13965936 tctcttccctatactctttaattatagtatacacaacacacacttgcacatttactttattaaacagtttttgtgtatgaactt 13966019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 17 - 199
Target Start/End: Complemental strand, 2369693 - 2369510
Alignment:
Q  17 agaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttc 115  Q
    ||||||||||| ||| |||||||||||||||||| |||||||||| |||||||||||  ||||||| | |||||||||||||||||||||||||||||||    
T  2369693 agaggttatctaaagcatcatagtggaaactctcacaagattgtgaggagtggactagtccacattaggtgaaccactataaatctctgtgtgttctttc 2369594  T
Q  116 tctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  2369593 tctcttctctatactctttaattacagtatacacaacacacacttgcacatttactttattaatcagtttttgtgtatgaactt 2369510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 18384133 - 18384317
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||| ||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||||||    
T  18384133 gagaggttatctcaagcatcatagtagaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatatgtgtgtgttcttt 18384232  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||    
T  18384233 ctctcttccttatactatttaattacagtatacacaacacacacttacacatttactttattaaactgtttttgtgtatgaactt 18384317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 12420198 - 12420372
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||  |    
T  12420198 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaattctctgtgtgttgat 12420297  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||| | |||||||||||||||   || |||||||||||||||| |||||||    
T  12420298 tctctcttccctatactctttacttactgcatacacaacacacacaaacacatttactttattaaactgtttttg 12420372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 16 - 189
Target Start/End: Original strand, 2117644 - 2117819
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggga-gtggactaaccc-acattggctgaaccactataaatctctgtgtgttctt 113  Q
    |||||||||||||||| | |||||||||||||||| |||||||||| || |||||||| ||| ||||||| ||||||||||||| |||||||||||||||    
T  2117644 gagaggttatctcaagcaccatagtggaaactctcacaagattgtgagaagtggactagccccacattgggtgaaccactataattctctgtgtgttctt 2117743  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgt 189  Q
    ||  ||||| |||||||||||||||| |||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  2117744 tccttcttctctatactctttaattatagtatacacaacacacacttgcacttttactttattaaactgtttttgt 2117819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 30548897 - 30548712
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| | |||||||||||||||  |||||||||| ||||||||||| ||||| |||| ||||||||||||| ||||||||||||||||    
T  30548897 gagaggttatctcaagcaccatagtggaaactcttacaagattgtgaggagtggactagcccacgttgggtgaaccactataattctctgtgtgttcttt 30548798  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagttt-ttgtgtatgaactt 199  Q
    |  ||||| |||||||||||||||| |||||||||||||||||| |||| ||||| |||||||||| |||| |||||| |||||||    
T  30548797 ccttcttctctatactctttaattatagtatacacaacacacacctgcacatttaatttattaaactgtttcttgtgtctgaactt 30548712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 37013141 - 37013326
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgt-gtgttctt 113  Q
    ||||||||||||  |  ||| |||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||      | |||||| |    
T  37013141 gagaggttatctataacatcgtagtggaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaaaaaaaattgtgttcct 37013240  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||    
T  37013241 tctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaactgtttttgtgtatgaactt 37013326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 20315220 - 20315394
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||  |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||||  |    
T  20315220 gagaggttatctcaaacatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaattctctgtgtgtttat 20315319  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||| | |||||||||||||||   || |||||||||||||||| |||||||    
T  20315320 tctctcttccctatactctttacttactgcatacacaacacacacaaacacatttactttattaaactgtttttg 20315394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 200
Target Start/End: Original strand, 25020257 - 25020442
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||| ||||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  25020257 gagaggttatctcaagcatcttagtggaaactctcacaggattgtgaggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 25020356  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaacttt 200  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  ||||||||||||||||  |||||| ||||||||||    
T  25020357 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttttactttattaaaca-attttgtttatgaacttt 25020442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 27066869 - 27067043
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||||  |    
T  27066869 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaattctctgtgtgtttat 27066968  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||  | |||||||||||||||   || |||||||||||||||| |||||||    
T  27066969 tctctcttccctatactctttacttattgcatacacaacacacacaaacacatttactttattaaactgtttttg 27067043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 199
Target Start/End: Original strand, 42035006 - 42035189
Alignment:
Q  19 aggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttctc 117  Q
    ||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| ||||| |||| ||||| ||||||| ||||||||||||||||| |    
T  42035006 aggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactagcccacgttgggtgaactactataattctctgtgtgttctttc-c 42035104  T
Q  118 tcttccct-atactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtt--tttgtgtatgaactt 199  Q
    |||| | | ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||  ||||| |||||||||    
T  42035105 tctttctttatactctttaattacagtatacacaacacacacttacacatttactttcttaaacagtttctttgtttatgaactt 42035189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 25868135 - 25868309
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||  |||||||||| ||||||||||||||||||||||  |||||||||||||| || ||||||||  |    
T  25868135 gagaggttatctcaagcatcatagtggaaactcttacaagattgtgaggagtggactaacccacattgggggaaccactataaattctgtgtgtgttgat 25868234  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    ||||||||||||||||| |||| |||| | |||||||||||||||   || |||||||||||||||| |||||||    
T  25868235 tctctcttccctatactttttacttactgcatacacaacacacacaaacacatttactttattaaactgtttttg 25868309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 16155672 - 16155856
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  16155672 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 16155771  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||| ||||||  |||||| |||||||||    
T  16155772 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttagtaaaca-attttgtttatgaactt 16155856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 49336538 - 49336663
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||  ||    
T  49336538 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaatctctgtgtgtttatt 49336637  T
Q  115 ctctcttccctatactctttaattac 140  Q
    ||||||||||||||||||||| ||||    
T  49336638 ctctcttccctatactctttacttac 49336663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 21459417 - 21459589
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  21459417 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 21459516  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttt 186  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||| |||||| ||||    
T  21459517 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttagtaaacaatttt 21459589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 18096191 - 18096017
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||  ||||||||| |||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||  ||    
T  18096191 gagaggttatctcaaacatcatagtgcaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatctctgtgtgttgatt 18096092  T
Q  115 ctctcttccctatactctttaattacagtataca-caacacacacttgcatatttactttattaaacagtttttg 188  Q
    ||||||||||||||||||||| |||| | | |||  |||||||||   || ||||||||| |||||| |||||||    
T  18096091 ctctcttccctatactctttacttactgcaaacataaacacacacaaacacatttactttgttaaactgtttttg 18096017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 20316963 - 20316789
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||| ||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||||  |    
T  20316963 gagaggttatctcaagcatcatagtgggaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaattctctgtgtgttgat 20316864  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    ||| |||||||||||||| ||| |||| | |||||||| ||||||   || |||||||||||||||| |||||||    
T  20316863 tctttcttccctatactccttacttactgcatacacaatacacacaaacacatttactttattaaactgtttttg 20316789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 20327445 - 20327271
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||| ||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||| |||| ||||||  |    
T  20327445 gagaggttatctcaagcatcatagtgggaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaattctctatgtgttgat 20327346  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    ||| |||||||||||||| ||| |||| | |||||||||||||||   || |||||||||||||||  |||||||    
T  20327345 tctttcttccctatactccttacttactgcatacacaacacacacaaacacatttactttattaaattgtttttg 20327271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 1973957 - 1973814
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||| ||||||||||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||||| | |||||||||||     
T  1973957 gagaagttatctcaagcatcatagtggaaaatctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttatgtgtgttcttc 1973858  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     ||||||| || |||| |||| |||||||| |||||||||||||    
T  1973857 ttctcttctctttactatttacttacagtaaacacaacacacac 1973814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 1988744 - 1988601
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||| ||||||||||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||||| | |||||||||||     
T  1988744 gagaagttatctcaagcatcatagtggaaaatctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttatgtgtgttcttc 1988645  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     ||||||| || |||| |||| |||||||| |||||||||||||    
T  1988644 ttctcttctctttactatttacttacagtaaacacaacacacac 1988601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 41543097 - 41542935
Alignment:
Q  20 ggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaa-tctctgtgtgttctttctc 117  Q
    |||||||||||  |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||| |||||| ||| ||||||||  |||||    
T  41543097 ggttatctcaaacatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccattataaaatctatgtgtgttgattctc 41542998  T
Q  118 tcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaac 180  Q
    |||||||||||||||||| |||| | |||||||||| ||||   || ||||||||||||||||    
T  41542997 tcttccctatactctttacttactgcatacacaacaaacacaaacacatttactttattaaac 41542935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 35 - 199
Target Start/End: Complemental strand, 21904581 - 21904416
Alignment:
Q  35 catagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttctctcttccctatactctt 133  Q
    |||||||||||||||| |||||||||| ||||||||||| ||||| |||| ||||||||||||| |||| ||||  ||||||  || || ||| ||||||    
T  21904581 catagtggaaactctcacaagattgtgaggagtggactagcccacgttgggtgaaccactataattctccgtgttctctttccttcatctctacactctt 21904482  T
Q  134 taattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||| |||||||| || || |||||||| ||| |||||||||||| ||||||||||||||||||    
T  21904481 taattatagtatacataatacgcacttgcacattcactttattaaactgtttttgtgtatgaactt 21904416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 25038668 - 25038548
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||| ||||||||  |||||||||||||| ||||||||||  ||    
T  25038668 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacacacattgggggaaccactataaatttctgtgtgttgatt 25038569  T
Q  115 ctctcttccctatactcttta 135  Q
    ||||||||| |||||||||||    
T  25038568 ctctcttccatatactcttta 25038548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 25043880 - 25043760
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||| ||||||||  |||||||||||||| ||||||||||  ||    
T  25043880 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacacacattgggggaaccactataaatttctgtgtgttgatt 25043781  T
Q  115 ctctcttccctatactcttta 135  Q
    ||||||||| |||||||||||    
T  25043780 ctctcttccatatactcttta 25043760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 4951219 - 4951344
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||||||||||||||| || |||||||||| |||||||||||||||||||| |  |||||||||||||| | ||||||||  ||    
T  4951219 gagaggttatctcaagcatcatagtggaaactttcacaagattgtgaggagtggactaacccacattaggggaaccactataaatttatgtgtgttgatt 4951318  T
Q  115 ctctcttccctatactctttaattac 140  Q
    ||||||||||||||||||||| ||||    
T  4951319 ctctcttccctatactctttacttac 4951344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 135
Target Start/End: Original strand, 22961693 - 22961813
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||  |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||| | ||||||||  ||    
T  22961693 gagaggttatctcaaacatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaatttatgtgtgttgatt 22961792  T
Q  115 ctctcttccctatactcttta 135  Q
    ||||||||| |||||||||||    
T  22961793 ctctcttccttatactcttta 22961813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 25822437 - 25822346
Alignment:
Q  15 agagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgt 105  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  ||||||||||||||||||||    
T  25822437 agagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattggaggaaccactataaatctctgt 25822346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 158
Target Start/End: Original strand, 34823761 - 34823900
Alignment:
Q  20 ggttatctcaagtatcatagtggaaactctctcaagattgtgggag-tggactaacccacattggctgaaccactataaatctctgtgtgttctttctct 118  Q
    |||||||||||  |||||||| |||||||||  ||||||||| ||  |||||||||||||||||| ||||||||||||||| | |||||||||||  |||    
T  34823761 ggttatctcaaacatcatagtagaaactctcataagattgtgagaaatggactaacccacattggatgaaccactataaatttttgtgtgttcttcttct 34823860  T
Q  119 cttccctatactctttaattacagtatacacaacacacac 158  Q
    |||| |||||||||||| ||||| |||| || ||||||||    
T  34823861 cttctctatactctttacttacaatatatactacacacac 34823900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 23 - 160
Target Start/End: Original strand, 22957253 - 22957390
Alignment:
Q  23 tatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttctctctt 121  Q
    |||||||| || ||||||| |||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| | |||||||| ||| ||||||    
T  22957253 tatctcaaataccatagtgcaaactctcacaagattgtgaggagtggactaacccacattggatgaaccactataaat-tatgtgtgttatttttctctt 22957351  T
Q  122 ccctatactctttaattacagtatacacaacacacactt 160  Q
     | ||||||||||| ||  ||||||||  ||||||||||    
T  22957352 tcttatactctttatttcaagtatacattacacacactt 22957390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 21820733 - 21820591
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||||||||||||||||||| || |||||||| | |||||||||||||||||||||| || |||||||||| | | || ||||||||     
T  21820733 gagaggttatctcaagtatcatagtggaaactttcacaagattgggaggagtggactaacccacattgggtgtaccactataactttttgcgtgttctt- 21820635  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacac 158  Q
     |||||| ||| ||||| ||||||||||||| |||| | ||||||    
T  21820634 -tctctttcctttactcttttaattacagtaaacactatacacac 21820591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 26192360 - 26192276
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat 99  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  ||||||||||||||    
T  26192360 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaat 26192276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 21793541 - 21793644
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||| ||| |||||||||||||||| | |||||||||| |||||||||||| ||||||||| ||||||||||||| | | ||||||||||||    
T  21793541 gagaggttatctaaagcatcatagtggaaactcccacaagattgtgaggagtggactaaaccacattgggtgaaccactataactttttgtgtgttcttt 21793640  T
Q  115 ctct 118  Q
    ||||    
T  21793641 ctct 21793644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 52948970 - 52948827
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||| |||||| |||||| |||| ||| | |||| ||||||||||||||||||||||  |||||||||||||| |||||||||||||     
T  52948970 gagaagttatctcaagcatcataatggaaaatctcacaaaactgtgaggagtggactaacccacattgggggaaccactataaatttctgtgtgttcttc 52948871  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     ||||||| || |||| ||||  || |||| | |||||||||||    
T  52948870 ttctcttctctttactatttacataaagtaaaaacaacacacac 52948827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 8541050 - 8541145
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgtt 110  Q
    |||| ||||||||||| ||| |||||||||||||| |||  ||||| ||||||||||||||||||||||  ||||| |||||||||||||||||||    
T  8541050 gagatgttatctcaagcatcgtagtggaaactctcacaatcttgtgaggagtggactaacccacattgggggaacctctataaatctctgtgtgtt 8541145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 8606289 - 8606384
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgtt 110  Q
    |||| ||||||||||| ||| |||||||||||||| |||  ||||| ||||||||||||||||||||||  ||||| |||||||||||||||||||    
T  8606289 gagatgttatctcaagcatcgtagtggaaactctcacaatcttgtgaggagtggactaacccacattgggggaacctctataaatctctgtgtgtt 8606384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 19735765 - 19735662
Alignment:
Q  86 gaaccactataaa-tctctgtgtgttctttctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtt 184  Q
    ||||||||||||| ||| ||||||||  ||||||||||||||||||||||||||||   |||||||||||||||   || |||||||||||||||| |||    
T  19735765 gaaccactataaaatctatgtgtgttgattctctcttccctatactctttaattactacatacacaacacacacaaacacatttactttattaaactgtt 19735666  T
Q  185 tttg 188  Q
    ||||    
T  19735665 tttg 19735662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 34000674 - 34000774
Alignment:
Q  35 catagtggaaactctctcaagattgtgg-gagtggactaacccacattggctgaaccactataaatctctgtgtgttctttctctcttccctatactctt 133  Q
    |||||||||||||||  ||||||||||  |||| |||||||||||||||| ||||||||||||||| | |||||||||||  ||||||| ||||||||||    
T  34000674 catagtggaaactcttacaagattgtgacgagtagactaacccacattgggtgaaccactataaat-tatgtgtgttcttcttctcttctctatactctt 34000772  T
Q  134 ta 135  Q
    ||    
T  34000773 ta 34000774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 19747511 - 19747443
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattgg 83  Q
    ||||| |||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  19747511 gagagattatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgg 19747443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 22959169 - 22959252
Alignment:
Q  52 caagattgtg-ggagtggactaacccacattggctgaaccactataaa-tctctgtgtgttctttctctcttccctatactctt 133  Q
    |||||||||| |||||||||||||||| ||||| ||||||| |||||| |||||||||||| ||| |||||||  |||||||||    
T  22959169 caagattgtgaggagtggactaacccatattggatgaaccattataaattctctgtgtgttatttttctcttctttatactctt 22959252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 22892368 - 22892413
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg 61  Q
    |||||||||||||||| ||||||||||||| |||| ||||||||||    
T  22892368 gagaggttatctcaagcatcatagtggaaattctcacaagattgtg 22892413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 149; Significance: 7e-79; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 15374494 - 15374678
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15374494 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatctctgtgtgttcttt 15374593  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||    
T  15374594 ctctcttccctatactctttaattacattatacacaacacacacttgcacatttactttattaaactatttttgtgtatgaactt 15374678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 14946900 - 14947084
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14946900 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatctctgtgtgttcttt 14946999  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||  |||||||||||||||||    
T  14947000 ctctcttccctatactctttaattacattatacacaacacacacttgcacacttactttattaaactatttttgtgtatgaactt 14947084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 43984449 - 43984633
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  43984449 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactagcccacattgggtgaaccactataattctctgtgtgttcttt 43984548  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| |||||||||||||    
T  43984549 ctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaactgtttatgtgtatgaactt 43984633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 27989883 - 27990067
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| | |||||||| ||||||||||||| |||||||| ||||||||||||||| ||||||||||||||    
T  27989883 gagaggttatctcaagcatcatagtggaaactctcacgagattgtgaggagtggactaacgcacattgggtgaaccactataaatttctgtgtgttcttt 27989982  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||  ||| |||||||||||||    
T  27989983 ctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaactatttgtgtgtatgaactt 27990067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 13130626 - 13130810
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||||||||| |||||||| |||||||||| ||||||||||| ||||| |||| ||||||||||||| ||||||||||||||||    
T  13130626 gagaggttatctcaagcatcatagtgcaaactctcacaagattgtgaggagtggactagcccacgttgggtgaaccactataattctctgtgtgttcttt 13130725  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |  ||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||    
T  13130726 ccttcttctctatactctttaattacagtatacacaacacacacttacacatttactttattaaactgtttttgtgtatgaactt 13130810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 16 - 187
Target Start/End: Complemental strand, 24539737 - 24539564
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||  |    
T  24539737 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaattctctgtgtgttgat 24539638  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagttttt 187  Q
    ||||||||||||||||| |||| |||| | |||||||||||||||   || |||||||||||||||| ||||||    
T  24539637 tctctcttccctatactatttacttactgcatacacaacacacacaaacacatttactttattaaactgttttt 24539564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 42621881 - 42622065
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| | |||||||||||||||| |||||||||| ||||||||||| | ||| |||| ||||||||||||| ||| | |||||| |||    
T  42621881 gagaggttatctcaagcaccatagtggaaactctcacaagattgtgaggagtggactagcacacgttgggtgaaccactataattctatatgtgttattt 42621980  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |  ||||| |||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||| |||| |||||| ||||||    
T  42621981 ccttcttctctatactctttaattatagtatacacaacacacacttgcacattaactttattaaactgtttatgtgtaagaactt 42622065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 19800889 - 19801063
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||||  |    
T  19800889 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaattctctgtgtgttgat 19800988  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    ||| |||||||||||||| ||| |||| | |||||||||||||||   || |||||||||||||||| |||||||    
T  19800989 tctttcttccctatactccttacttactgcatacacaacacacacaaacacatttactttattaaactgtttttg 19801063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 11625637 - 11625453
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  11625637 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 11625538  T
Q  115 ctctcttccctatactctttaat-tacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| ||||||||||| || ||||||||||||||||||||||| ||  | ||||||||||||||  |||||| |||||||||    
T  11625537 ctttcttctctatactcttttatctacagtatacacaacacacacttacacttatactttattaaaca-attttgtttatgaactt 11625453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 46497903 - 46498087
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  46497903 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 46498002  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||||||  |||||| |||||||||    
T  46498003 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaaaca-attttgtttatgaactt 46498087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 46508515 - 46508699
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  46508515 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 46508614  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||||||  |||||| |||||||||    
T  46508615 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaaaca-attttgtttatgaactt 46508699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 9007734 - 9007877
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||| |||||||| ||     
T  9007734 gagaggttatctcaagcatcatagtggaaactctctcaagattgtgaggagtggactggcccacattggatgaaccactataaatctttgtgtgttattc 9007833  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     |||||||||||||||||||| ||||| ||||||| ||||||||    
T  9007834 ttctcttccctatactctttatttacaatatacactacacacac 9007877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 5927924 - 5928108
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  5927924 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 5928023  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  5928024 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 5928108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 6535273 - 6535457
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  6535273 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 6535372  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  6535373 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 6535457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 6545594 - 6545778
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  6545594 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 6545693  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  6545694 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 6545778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 8501838 - 8502022
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  8501838 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 8501937  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  8501938 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 8502022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 8512308 - 8512492
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  8512308 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 8512407  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  8512408 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 8512492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 16131187 - 16131003
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  16131187 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 16131088  T
Q  115 ctctcttccctatactctttaat-tacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| ||||||||||| || ||||||||||||||||||||||  ||  | ||||||||||||||  |||||| |||||||||    
T  16131087 ctttcttctctatactcttttatctacagtatacacaacacacactcacacttatactttattaaaca-attttgtttatgaactt 16131003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 32109606 - 32109790
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  32109606 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 32109705  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  32109706 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 32109790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 44898087 - 44898271
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  44898087 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 44898186  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  44898187 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 44898271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 44908512 - 44908696
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  44908512 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 44908611  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  44908612 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 44908696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 9534511 - 9534327
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| | |||||||||||||||| |||||||||| ||||||||||| ||||| |||| ||||||||||||| ||||||||||||||||    
T  9534511 gagaggttatctcaagcaccatagtggaaactctcacaagattgtgaggagtggactagcccacgttgggtgaaccactataattctctgtgtgttcttt 9534412  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
       ||||| |||||||| ||||||| |||  |||||||||||||||||| |||||| |||||||   |||||||  |||||||||    
T  9534411 tcttcttctctatactcgttaattatagttcacacaacacacacttgcacatttaccttattaatatgtttttgcatatgaactt 9534327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 16141736 - 16141569
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  16141736 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 16141637  T
Q  115 ctctcttccctatactctttaat-tacagtatacacaacacacacttgcatatttactttattaaaca 181  Q
    || ||||| ||||||||||| || ||||||||||||||||||||||  ||  | ||||||||||||||    
T  16141636 ctttcttctctatactcttttatctacagtatacacaacacacactcacacttatactttattaaaca 16141569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 19586536 - 19586710
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    ||||| |||||||||| |||||||||||||||||| ||||| |||| ||||||||||||||||||||||  |||||||||||||| |||||||||||  |    
T  19586536 gagagattatctcaagcatcatagtggaaactctcacaagaatgtgaggagtggactaacccacattgggggaaccactataaattctctgtgtgttgat 19586635  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||| | ||| |||||||||||   || |||||| ||||||||| |||||||    
T  19586636 tctctcttccctatactctttacttactgcatatacaacacacacaaacacatttaccttattaaactgtttttg 19586710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 45554346 - 45554520
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaa-tctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||| |||||||  ||||||||||||| |||| |||||||  |    
T  45554346 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacctacattgggggaaccactataaattctccgtgtgttgat 45554445  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||  | | |||||||||||||   || |||||||||||||||| |||||||    
T  45554446 tctctcttccctatactctttacttattgcacacacaacacacacaaacacatttactttattaaactgtttttg 45554520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 5381085 - 5380901
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| | | ||||||||||||    
T  5381085 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactttttgtgtgttcttt 5380986  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  5380985 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 5380901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 5390723 - 5390539
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| | | ||||||||||||    
T  5390723 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactttttgtgtgttcttt 5390624  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  5390623 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 5390539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 26304344 - 26304528
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| | | ||||||||||||    
T  26304344 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactttttgtgtgttcttt 26304443  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  26304444 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 26304528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 26307904 - 26308088
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| | | ||||||||||||    
T  26307904 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactttttgtgtgttcttt 26308003  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  26308004 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 26308088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 26362474 - 26362290
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| | | ||||||||||||    
T  26362474 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactttttgtgtgttcttt 26362375  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  26362374 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 26362290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 32099169 - 32099353
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||  |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  32099169 gagaggttatctcaagcattttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 32099268  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  32099269 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 32099353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 9544794 - 9544610
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| | |||||||||||||||| |||||||||| ||||| ||||| ||||| |||| ||||||||||||| ||||||||||||||||    
T  9544794 gagaggttatctcaagcaccatagtggaaactctcacaagattgtgaggagtagactagcccacgttgggtgaaccactataattctctgtgtgttcttt 9544695  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
       ||||| |||||||| ||||||| |||  |||||||||||||||||| |||||| ||||||| | |||| ||  |||||||||    
T  9544694 tcttcttctctatactcgttaattatagttcacacaacacacacttgcacatttaccttattaatctgtttctgcatatgaactt 9544610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 146
Target Start/End: Complemental strand, 2991161 - 2991030
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||||||||||||| |||| ||| |||||| | |||||||||||||||||||| |||||||||||||||||  |||||||||||    
T  2991161 gagaggttatctcaagaatcatagtggaaattctcacaatattgtgagtagtggactaacccacattgggtgaaccactataaatcttagtgtgttcttt 2991062  T
Q  115 ctctcttccctatactctttaattacagtata 146  Q
    ||||||||||||||||| |||||| |||||||    
T  2991061 ctctcttccctatactcattaatttcagtata 2991030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 15987937 - 15987794
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||  |||||||| ||||||||| |||||||||| ||||||||||| | |||||||| ||||||||||||||||| |||||||||||     
T  15987937 gagaggttatctcaaacatcatagtagaaactctcacaagattgtgaggagtggactagctcacattgggtgaaccactataaatctttgtgtgttcttc 15987838  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
    ||||||||||||||||||||| || |||||||||  ||||||||    
T  15987837 ctctcttccctatactctttattttcagtatacattacacacac 15987794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 10416773 - 10416945
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||| ||| |||||||       
T  10416773 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaattctccgtgtgttgag 10416872  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    ||||||||||||| | |||||| |||| | ||||||||||||||    || |||||||||||||||| |||||||    
T  10416873 tctctcttccctacattctttacttactgcatacacaacacacaaa--cacatttactttattaaactgtttttg 10416945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 31825508 - 31825651
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||| ||||||||||||| |||| ||| |||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||     
T  31825508 gagaagttatctcaagcatcatagtggaaaatctcacaaaattgtgaggagtggactaacccacattgggtgaaccactataaatttctgtgtgttcttc 31825607  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     ||||||| || |||| |||| |||||||| |||||||||||||    
T  31825608 ttctcttctctttactatttacttacagtaaacacaacacacac 31825651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 8340997 - 8341169
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtgggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttc 115  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||| |||||| |||||||||||||  |||||||||||||| | ||||||||  |||    
T  8340997 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgg-agtggaataacccacattgggggaaccactataaatatttgtgtgttgattc 8341095  T
Q  116 tctcttccctatactctttaattacagtatacac-aacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||| |||| | | |||| || ||||||   || ||||||||| |||||| |||||||    
T  8341096 tctcttccctatactctttacttactgcaaacacaaagacacacaaacacatttactttgttaaactgtttttg 8341169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 5614725 - 5614582
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||| ||||||||||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||     
T  5614725 gagaagttatctcaagcatcatagtggaaaatctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttctgtgtgttcttc 5614626  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     ||||||| || |||| ||||  |||| || |||||||||||||    
T  5614625 ttctcttctctttactatttacctacaataaacacaacacacac 5614582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 14247774 - 14247631
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||| ||||||||||| |||||||||| ||||||||||||||| | ||||||||| ||    
T  14247774 gagaggttatctcaagcatcatagtggaaactctcaaaagattgtgaggagtggactagcccacattgggtgaaccactataaatatttgtgtgttcctt 14247675  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
    |||||||  ||| |||||||||||  ||||||| | ||||||||    
T  14247674 ctctcttttctacactctttaattttagtatacgctacacacac 14247631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 41028389 - 41028532
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||| ||||||||||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||     
T  41028389 gagaagttatctcaagcatcatagtggaaaatctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttctgtgtgttcttc 41028488  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     ||||||| || || | |||| ||||| || |||||||||||||    
T  41028489 ttctcttctctttaatatttacttacattaaacacaacacacac 41028532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 12826650 - 12826507
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||| ||||||||||||| |||| |||||||||| | |||||||||||||||||||| ||||||||||||||| ||| |||||||||     
T  12826650 gagaagttatctcaagcatcatagtggaaaatctcacaagattgtgagtagtggactaacccacattgggtgaaccactataaatttctatgtgttcttc 12826551  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     ||| ||  || ||||||||| |||||||| |||||||||||||    
T  12826550 ttcttttatctttactctttacttacagtaaacacaacacacac 12826507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 13284979 - 13284836
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||| ||||||||||||| |||| |||||||||| ||||||||||||||||||||||  |||||| ||||||| |||||||||||||     
T  13284979 gagaagttatctcaagcatcatagtggaaaatctcacaagattgtgaggagtggactaacccacattgggggaaccattataaatttctgtgtgttcttc 13284880  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     ||||||| || |||| |||| |||||||| | |||||||||||    
T  13284879 ttctcttctctttactatttacttacagtaaatacaacacacac 13284836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 176
Target Start/End: Complemental strand, 7018677 - 7018496
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgt----- 109  Q
    |||||||||||||||  ||||||||||||||  || |||||||||| |||||||||||||||||||||| ||||||||||||||||| | |||||         
T  7018677 gagaggttatctcaaacatcatagtggaaaccttcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatctttatgtgttctct 7018578  T
Q  110 ---------------tctttctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttatt 176  Q
                   ||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  7018577 ctctctctctctctctctctctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttatt 7018496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 19 - 132
Target Start/End: Original strand, 12492250 - 12492364
Alignment:
Q  19 aggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttctc 117  Q
    ||||||||||||  |||||||| | ||||||| |||||| ||| |||||||| |||||||||||||  |||||||||||||||||||||||||  |||||    
T  12492250 aggttatctcaaacatcatagtaggaactctcacaagatcgtgaggagtggagtaacccacattggaggaaccactataaatctctgtgtgtttattctc 12492349  T
Q  118 tcttccctatactct 132  Q
    |||||||||||||||    
T  12492350 tcttccctatactct 12492364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 7034039 - 7033934
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||  ||||||||||||||  || |||||||||| |||||||||||||||||||||| ||||||||||||||||| | |||||||| |    
T  7034039 gagaggttatctcaaacatcatagtggaaaccttcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatctttatgtgttctct 7033940  T
Q  115 ctctct 120  Q
    ||||||    
T  7033939 ctctct 7033934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 12516052 - 12516169
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||| ||  |||||||||| ||||||| |||||| ||| |||||||| |||||||||||||  |||||||||||||||| ||||||||  ||    
T  12516052 gagaggttatcttaaacatcatagtgggaactctcacaagatcgtgaggagtggagtaacccacattgggggaaccactataaatctgtgtgtgtttatt 12516151  T
Q  115 ctctcttccctatactct 132  Q
    ||||||||||||||||||    
T  12516152 ctctcttccctatactct 12516169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 12574972 - 12575097
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||  |||||||||||||||||| |||||| ||| |||||||| |||||||||||||  |||||| ||||||||||||||| ||  ||    
T  12574972 gagaggttatctcaaacatcatagtggaaactctcacaagatcgtgaggagtggagtaacccacattgggggaaccattataaatctctgtgtttttatt 12575071  T
Q  115 ctctcttccctatactctttaattac 140  Q
    |||| |||| ||||||||||| ||||    
T  12575072 ctctattccatatactctttacttac 12575097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 7033916 - 7033854
Alignment:
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttatt 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  7033916 tctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttatt 7033854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 16 - 135
Target Start/End: Original strand, 12088115 - 12088235
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||| ||| || |||||| |||| |||||||||| |||||||||||||||||||||| |||||| |||||||| | |||||||||||     
T  12088115 gagaagttatctcaagcatcttattggaaaatctcacaagattgtgaggagtggactaacccacattgggtgaaccgctataaatttttgtgtgttcttc 12088214  T
Q  115 ctctcttccctatactcttta 135  Q
     | ||||| || |||||||||    
T  12088215 ttatcttctctttactcttta 12088235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 12770872 - 12770973
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| ||||  | || |||||||||||||  |||| ||||||||||    
T  12770872 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactagcccatgtcgggtgaaccactataa--ctctttgtgttcttt 12770969  T
Q  115 ctct 118  Q
    ||||    
T  12770970 ctct 12770973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 42596172 - 42596315
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||| ||||||||| ||| |||| ||| | |||| ||||| |||| |||||||||||  |||||||||||||| | |||||||||||     
T  42596172 gagaagttatctcaagcatcatagtgaaaaatctcacaaaactgtgaggagtagactgacccacattgggggaaccactataaatttttgtgtgttcttc 42596271  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     ||||||| || |||| |||| |||||| | |||||||||||||    
T  42596272 ttctcttctctttactatttacttacagcaaacacaacacacac 42596315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 40703346 - 40703391
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg 61  Q
    |||||||||||||||| ||||||||||||| |||| ||||||||||    
T  40703346 gagaggttatctcaagcatcatagtggaaattctcacaagattgtg 40703391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 145; Significance: 2e-76; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 3988301 - 3988485
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  3988301 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttctgtgtgttcttt 3988400  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| |||||||||||||    
T  3988401 ctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaactgtttatgtgtatgaactt 3988485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 13675549 - 13675733
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  13675549 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttctgtgtgttcttt 13675648  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| |||||||||||||    
T  13675649 ctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaactgtttatgtgtatgaactt 13675733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 21987021 - 21986837
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  21987021 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttctgtgtgttcttt 21986922  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| |||||||||||||    
T  21986921 ctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaactgtttatgtgtatgaactt 21986837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 21996555 - 21996371
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  21996555 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttctgtgtgttcttt 21996456  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| |||||||||||||    
T  21996455 ctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaactgtttatgtgtatgaactt 21996371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 12900580 - 12900396
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  12900580 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactagcccacattgggtgaaccactataattctctgtgtgttcttt 12900481  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| |||||||||||||    
T  12900480 ctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaactgtttatgtgtatgaactt 12900396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 21461894 - 21462078
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| | |||||||||||||||| |||||||||| ||||||||||| ||||| |||| ||||||||||||| ||||||||||||||||    
T  21461894 gagaggttatctcaagcaccatagtggaaactctcacaagattgtgaggagtggactagcccacgttgggtgaaccactataattctctgtgtgttcttt 21461993  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |  ||||| |||||||||||||||| || |||||||||||||||||||| ||| |||||||||||| |||| |||||||||||||    
T  21461994 ccttcttctctatactctttaattatagcatacacaacacacacttgcacattgactttattaaactgtttctgtgtatgaactt 21462078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 31998513 - 31998339
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| ||||||||||||| |||| |||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||||  |    
T  31998513 gagaggttatctcaagcatcatagtggaaattctcacaagattgtgaggagtggactaacccacattgggggaaccactataaattctctgtgtgtttat 31998414  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||| | |||||||||||||||   || |||||||||||||||| |||||||    
T  31998413 tctctcttccctatactctttacttactgcatacacaacacacacaaacacatttactttattaaactgtttttg 31998339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 33773400 - 33773228
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||||  |    
T  33773400 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaattctctgtgtgttgat 33773301  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttt 186  Q
    |||||||||| ||||||||||| |||| | |||||||||||||||   || |||||||||||||||| |||||    
T  33773300 tctctcttccttatactctttacttactgcatacacaacacacacaaacacatttactttattaaactgtttt 33773228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 14893307 - 14893133
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||||  |    
T  14893307 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaattctctgtgtgtttat 14893208  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||  | |||||||||||||||   || |||||  ||||||||| |||||||    
T  14893207 tctctcttccctatactctttacttattgcatacacaacacacacaaacacatttatcttattaaactgtttttg 14893133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 31990924 - 31990750
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||| ||||||||||||||||  |||||||||||||| |||||||||||  |    
T  31990924 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtagactaacccacattgggggaaccactataaattctctgtgtgtttat 31990825  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||  | |||||||||||||||   || |||||||||||||||  |||||||    
T  31990824 tctctcttccctatactctttacttattgcatacacaacacacacaaacacatttactttattaaattgtttttg 31990750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 14880957 - 14880783
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaa-tctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  ||||||||||||| ||||||||||||  |    
T  14880957 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaattctctgtgtgtttat 14880858  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||  | |||||||||||| ||   || |||||  ||||||||| |||||||    
T  14880857 tctctcttccctatactctttacttattgcatacacaacacagacaaacacatttatcttattaaactgtttttg 14880783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 9324306 - 9324123
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  9324306 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 9324207  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||| ||||||||||| ||  | ||||||||||||||  |||||| |||||||||    
T  9324206 ctttcttctctatactcttttatttacagtatacataacacacactt-cacttatactttattaaaca-attttgtttatgaactt 9324123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 21202106 - 21201922
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  21202106 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 21202007  T
Q  115 ctctcttccctata-ctctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| ||||| || |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  21202006 ctttcttctctatacctttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 21201922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 21212522 - 21212338
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  21212522 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 21212423  T
Q  115 ctctcttccctata-ctctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| ||||| || |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  21212422 ctttcttctctatacctttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 21212338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 21335087 - 21335271
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  21335087 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 21335186  T
Q  115 ctctcttccctatac-tctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||| | |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  21335187 ctttcttctctatacttttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 21335271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 101 - 199
Target Start/End: Original strand, 16582828 - 16582926
Alignment:
Q  101 tctgtgtgttctttctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| |||||||||||||    
T  16582828 tctgtgtgttctttctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaactgtttatgtgtatgaactt 16582926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 187
Target Start/End: Complemental strand, 20530140 - 20529970
Alignment:
Q  19 aggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctttct 116  Q
    ||||||||||||| ||||||||||||| |||| |||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||||  ||||    
T  20530140 aggttatctcaagcatcatagtggaaaatctcacaagattgtgaggagtggactaacccacattgggggaaccactataaattctctgtgtgttgattct 20530041  T
Q  117 ctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagttttt 187  Q
    || || | ||||||||||| |||| | |||||||||||||||   || |||||||||||||||| ||||||    
T  20530040 ctttttcttatactctttacttactgcatacacaacacacacaaacacatttactttattaaactgttttt 20529970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 11429737 - 11429621
Alignment:
Q  20 ggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttctct 118  Q
    |||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||| ||||  |||||||||||||||||||||||||  ||||||    
T  11429737 ggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccaccttgggggaaccactataaatctctgtgtgtttattctct 11429638  T
Q  119 cttccctatactcttta 135  Q
    |||||||||||||||||    
T  11429637 cttccctatactcttta 11429621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 26361611 - 26361468
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||| ||| ||||||||||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||     
T  26361611 gagaagttatcttaagcatcatagtggaaaatctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttctgtgtgttcttc 26361512  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     ||||||| || |||| |||| |||||||| |||||||||||||    
T  26361511 ttctcttctctttactatttacttacagtaaacacaacacacac 26361468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 2689553 - 2689419
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggga-gtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| || |||||||||||| || |||||||||| || |||||||| ||||||||||  || ||||||||||||| ||||||||||||    
T  2689553 gagaggttatctcaagcataatagtggaaactttcacaagattgtgagaagtggactagcccacattgggcgagccactataaatctttgtgtgttcttt 2689454  T
Q  115 ctctcttccctatactctttaattacagtatacac 149  Q
    |||||||| ||||||||||||||| ||||||||||    
T  2689453 ctctcttcactatactctttaatttcagtatacac 2689419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 23 - 158
Target Start/End: Original strand, 14438220 - 14438356
Alignment:
Q  23 tatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttctctctt 121  Q
    ||||| ||| ||||||||||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||| |  | ||||    
T  14438220 tatctaaagcatcatagtggaaaatctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttctgtgtgttcctcttttctt 14438319  T
Q  122 ccctatactctttaattacagtatacacaacacacac 158  Q
    | || |||| |||| |||||||| |||||||||||||    
T  14438320 ctctttactatttacttacagtaaacacaacacacac 14438356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 62 - 141
Target Start/End: Original strand, 17269568 - 17269647
Alignment:
Q  62 ggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttctctcttccctatactctttaattaca 141  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  17269568 ggagtggactaacccacattgggtgaaccactataaatcgctgtgtgttctttctctcttccctagactctttaattaca 17269647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 18537440 - 18537582
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||| ||||| || |||||||||| |||| |||||||||| |||||||| ||||||||||||| ||||||||||||||| | |||||||||||     
T  18537440 gagaggttatttcaagcattatagtggaaattctcacaagattgtgaggagtggattaacccacattggatgaaccactataaat-tatgtgtgttctta 18537538  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     |||||||| ||||||||||| || || || |||||||| ||||    
T  18537539 ttctcttccttatactctttactttcattaaacacaacaaacac 18537582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 12840726 - 12840586
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||| ||||||||| |||||| |||||| |||| |||||||||| |||||||| ||||||||||||| ||||||||||||||  | |||||||| |      
T  12840726 gagagggtatctcaagcatcataatggaaattctcacaagattgtgaggagtggattaacccacattgggtgaaccactataaa--tttgtgtgttttac 12840629  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     |||||||| |||| | |||| |||||| |||||||||||||||    
T  12840628 ttctcttccttataat-tttacttacagcatacacaacacacac 12840586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 6760607 - 6760696
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgt-gggagtggactaacccacatt-ggctgaaccactataaatctct 103  Q
    |||||||||||||||  |||||||||||||||||| |||||||||  |||||||||||||||||||| ||  ||||||||||||||||||    
T  6760607 gagaggttatctcaaacatcatagtggaaactctcacaagattgtaaggagtggactaacccacattggggcgaaccactataaatctct 6760696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 23014303 - 23014235
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattgg 83  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||| ||||||||||| ||||    
T  23014303 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagttgactaacccacgttgg 23014235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 113 - 188
Target Start/End: Original strand, 8668833 - 8668908
Alignment:
Q  113 ttctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    ||||||||||||||||||||||| |||| | |||||||||||||||   || |||||||||||||||| |||||||    
T  8668833 ttctctcttccctatactctttacttactgcatacacaacacacacaaacacatttactttattaaactgtttttg 8668908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 145; Significance: 2e-76; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 16250235 - 16250419
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  16250235 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttctgtgtgttcttt 16250334  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| |||||||||||||    
T  16250335 ctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaactgtttatgtgtatgaactt 16250419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 5292183 - 5291999
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  5292183 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactagcccacattgggtgaaccactataattctctgtgtgttcttt 5292084  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| |||||||||||||    
T  5292083 ctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaactgtttatgtgtatgaactt 5291999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 5301842 - 5301658
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  5301842 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactagcccacattgggtgaaccactataattctctgtgtgttcttt 5301743  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| |||||||||||||    
T  5301742 ctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaactgtttatgtgtatgaactt 5301658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 21847075 - 21847259
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  21847075 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactagcccacattgggtgaaccactataattctctgtgtgttcttt 21847174  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| |||||||||||||    
T  21847175 ctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaactgtttatgtgtatgaactt 21847259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 21856667 - 21856851
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  21856667 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactagcccacattgggtgaaccactataattctctgtgtgttcttt 21856766  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| |||||||||||||    
T  21856767 ctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaactgtttatgtgtatgaactt 21856851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 21902938 - 21903122
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  21902938 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactagcccacattgggtgaaccactataattctctgtgtgttcttt 21903037  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| |||||||||||||    
T  21903038 ctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaactgtttatgtgtatgaactt 21903122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 21912530 - 21912714
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  21912530 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactagcccacattgggtgaaccactataattctctgtgtgttcttt 21912629  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| |||||||||||||    
T  21912630 ctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaactgtttatgtgtatgaactt 21912714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 27679848 - 27679664
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  27679848 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactagcccacattgggtgaaccactataattctctgtgtgttcttt 27679749  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| |||||||||||||    
T  27679748 ctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaactgtttatgtgtatgaactt 27679664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 27689503 - 27689319
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  27689503 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactagcccacattgggtgaaccactataattctctgtgtgttcttt 27689404  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| |||||||||||||    
T  27689403 ctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaactgtttatgtgtatgaactt 27689319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 3486722 - 3486538
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||| ||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||| |||||||||| | |||    
T  3486722 gagaggttatctcaagcatcatagtagaaactctcacaagattgtgaggagtggactagcccacattgggtgaaccactataattctctgtgtgctattt 3486623  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |  ||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  3486622 ccttcttctctatactctttaattacagtatacaccacacacacttgcacatttactttattaaacagtttttgtttatgaactt 3486538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 3496045 - 3495861
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||| ||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||| |||||||||| | |||    
T  3496045 gagaggttatctcaagcatcatagtagaaactctcacaagattgtgaggagtggactagcccacattgggtgaaccactataattctctgtgtgctattt 3495946  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |  ||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  3495945 ccttcttctctatactctttaattacagtatacaccacacacacttgcacatttactttattaaacagtttttgtttatgaactt 3495861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 15670869 - 15671052
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||| || ||||||||||||| ||||||||||||||||    
T  15670869 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacatagggtgaaccactataattctctgtgtgttcttt 15670968  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaact 198  Q
    |  ||||| |||||||||||| |||||||||||||||||||||||| || | |||||||||||||| |||||||| ||||||||    
T  15670969 ccttcttctctatactctttatttacagtatacacaacacacacttacacaattactttattaaactgtttttgtttatgaact 15671052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 10422572 - 10422756
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||| ||| |||||| |||||    
T  10422572 gagaggttatctcaagcatcataatggaaactctcacaagattgtgaggagtggactagcccacattgggtgaaccactataattctttgtgtgctcttt 10422671  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |  ||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||| |||||||||    
T  10422672 cattcttctctatactctttaattacagtatacacaacacacacttacacatttactttattaaatagtttttgtttatgaactt 10422756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 21 - 199
Target Start/End: Complemental strand, 7843127 - 7842948
Alignment:
Q  21 gttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttctctc 119  Q
    ||||||||||| |||||||||||||||||| |||||||||| ||||||||||| ||||| |||| ||||||||||||| ||| ||||||||||||| |||    
T  7843127 gttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactagcccacgttgggtgaaccactataactctttgtgtgttctttccctc 7843028  T
Q  120 ttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    ||| ||||||||||||||||||| ||||||||||||||||| || |||||||||||||||| |||||||| |||||||||    
T  7843027 ttctctatactctttaattacagcatacacaacacacacttacacatttactttattaaactgtttttgtttatgaactt 7842948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 7846012 - 7845828
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||||||| ||||||||||  ||||||||| ||||||||||| ||||| |||| ||||||||||||| ||| ||||||||||||    
T  7846012 gagaggttatctcaagcatcataggggaaactctcataagattgtgaggagtggactagcccacgttgggtgaaccactataactctttgtgtgttcttt 7845913  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    | |||||| ||||||||||||||||||| ||||||||||||||||| || |||||||||||||||  |||||||| |||||||||    
T  7845912 ccctcttctctatactctttaattacagcatacacaacacacacttacacatttactttattaaattgtttttgtttatgaactt 7845828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 16254025 - 16254208
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| | |||||||||||||||| ||| |||||| ||||| ||||| ||||| |||| ||||||||||||| ||||||||||||||||    
T  16254025 gagaggttatctcaagcaccatagtggaaactctcacaaaattgtgaggagtagactagcccacgttgggtgaaccactataattctctgtgtgttcttt 16254124  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |  ||||| |||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  16254125 ccttcttctctatactctttaattatagtataca-aacacacacttgcacatttactttattaaactgtttttgtgtatgaactt 16254208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 17827270 - 17827096
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||  |    
T  17827270 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaattctctgtgtgttgat 17827171  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||| | |||||||||||||||   || |||||||||||||||| |||||||    
T  17827170 tctctcttccctatactctttacttactgcatacacaacacacacaaacacatttactttattaaactgtttttg 17827096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 17836661 - 17836487
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||  |    
T  17836661 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaattctctgtgtgttgat 17836562  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||| | |||||||||||||||   || |||||||||||||||| |||||||    
T  17836561 tctctcttccctatactctttacttactgcatacacaacacacacaaacacatttactttattaaactgtttttg 17836487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 2830775 - 2830949
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||||  |    
T  2830775 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaattctctgtgtgttgat 2830874  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||| | |||||||||||||||   || |||||||||||||||| |||||||    
T  2830875 tctctcttccctatactctttacttactgcatacacaacacacacaaacacatttactttattaaactgtttttg 2830949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 16630322 - 16630496
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||||  |    
T  16630322 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaattctctgtgtgttgat 16630421  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||| | |||||||||||||||   || |||||||||||||||| |||||||    
T  16630422 tctctcttccctatactctttacttactgcatacacaacacacacaaacacatttactttattaaactgtttttg 16630496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 30652456 - 30652629
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||  |||||||||||||||||| |||||||||| ||||| |||||||| |||||||  |||||||||||||||| || |||||||||    
T  30652456 gagaggttatctcaaacatcatagtggaaactctcacaagattgtgaggagttgactaaccaacattgggggaaccactataaatctttgagtgttcttt 30652555  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||||| |||||||||| ||||||||    | |||||||||||||||| |||||||    
T  30652556 ctctcttccctatactctttaatttcagtatacaccacacacacaaaaacatttactttattaaactgtttttg 30652629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 13792307 - 13792164
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||||||| |||||||||||     
T  13792307 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactagcccacattgggtgaaccactataaatctttgtgtgttcttc 13792208  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     ||||||||||||||||||||||| ||| |||||| ||||||||    
T  13792207 ttctcttccctatactctttaatttcagcatacaccacacacac 13792164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 180
Target Start/End: Complemental strand, 13402059 - 13401894
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||| |||||||||||||||||||| | ||||||||||||||| | |||||||||||     
T  13402059 gagaggttatctcaagcatcgtagtggaaactctcacaagattgtgaggagtggactaacccacatttggtgaaccactataaatttttgtgtgttcttc 13401960  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaac 180  Q
     | ||||||||||||| |||| ||||||||||||||||||||||   || ||||||||||||||||    
T  13401959 ttatcttccctatactttttatttacagtatacacaacacacacaaacacatttactttattaaac 13401894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 16059160 - 16059333
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||  ||||||||||||| |||  |||||||||| ||||||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  16059160 gagaggttatctcaaacatcatagtggaaattcttacaagattgtgaggagtggactaacccacattgggggaaccactataaatctttgtgtgttcttt 16059259  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    ||||||||| |||||||||||||| ||| |||||| ||| ||||   || |||||||||||||||| |||||||    
T  16059260 ctctcttccttatactctttaatttcagcatacaccacatacacaaacacatttactttattaaactgtttttg 16059333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 17984144 - 17983977
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  17984144 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 17984045  T
Q  115 ctctcttccctatactctttaat-tacagtatacacaacacacacttgcatatttactttattaaaca 181  Q
    || ||||| ||||||||||| || ||||||||||||||||||||||| ||  | ||||||||||||||    
T  17984044 ctttcttctctatactcttttatctacagtatacacaacacacacttacacttatactttattaaaca 17983977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 18104694 - 18104527
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  18104694 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 18104595  T
Q  115 ctctcttccctatactctttaat-tacagtatacacaacacacacttgcatatttactttattaaaca 181  Q
    || ||||| ||||||||||| || ||||||||||||||||||||||| ||  | ||||||||||||||    
T  18104594 ctttcttctctatactcttttatctacagtatacacaacacacacttacacttatactttattaaaca 18104527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 6693007 - 6693191
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  6693007 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 6693106  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  6693107 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 6693191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 6703413 - 6703597
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  6703413 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 6703512  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  6703513 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 6703597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 16081552 - 16081368
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  16081552 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 16081453  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  16081452 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 16081368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 17144519 - 17144704
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| ||||| |||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||| ||||| |||  |||||    
T  17144519 gagaggttatctcaagcatcgtagtgaaaactctcacaagattgtgaggagtggactagcccacattgggtgaaccactataattctctatgttctcttt 17144618  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacag-tttttgtgtatgaactt 199  Q
    |  ||||| ||||| ||||||||| ||||||| ||||||||||||  || |||||||||||||||||| ||||||| |||||||||    
T  17144619 ccttcttctctatattctttaattgcagtatagacaacacacactaacacatttactttattaaacagttttttgtttatgaactt 17144704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 40922632 - 40922816
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  40922632 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 40922731  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  40922732 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 40922816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 53945384 - 53945259
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| |||  ||    
T  53945384 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaatctctgtgcgtttatt 53945285  T
Q  115 ctctcttccctatactctttaattac 140  Q
    ||||||||||||||||||||| ||||    
T  53945284 ctctcttccctatactctttacttac 53945259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 518962 - 518819
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||| ||||||||||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||     
T  518962 gagaagttatctcaagcatcatagtggaaaatctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttctgtgtgttcttc 518863  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     ||||||| || |||| |||| |||||||| |||||||||||||    
T  518862 ttctcttctctttactatttacttacagtaaacacaacacacac 518819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 521468 - 521325
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||| ||||||||||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||     
T  521468 gagaagttatctcaagcatcatagtggaaaatctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttctgtgtgttcttc 521369  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     ||||||| || |||| |||| |||||||| |||||||||||||    
T  521368 ttctcttctctttactatttacttacagtaaacacaacacacac 521325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 44889808 - 44889982
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||| | ||||||  |||| ||||||||| |||||||||||  |    
T  44889808 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacacccattgggggaactactataaattctctgtgtgttgat 44889907  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||  | |||||||||||||||   || ||||| |||||||||| |||||||    
T  44889908 tctctcttccctatactctttacttagtgcatacacaacacacacaaacacatttattttattaaactgtttttg 44889982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 14599928 - 14599769
Alignment:
Q  17 agaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttc 115  Q
    |||||||||||||||||||||||| |||||||||  | ||||||| ||||||||| | |||||||| | ||||||||||||||| | |||||||||||||    
T  14599928 agaggttatctcaagtatcatagttgaaactctcataggattgtgaggagtggaccagcccacattaggtgaaccactataaatatttgtgtgttctttc 14599829  T
Q  116 tctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttat 175  Q
    | |||||| |||||||||||||| |||||||||| ||||||||   || |||||||||||    
T  14599828 tttcttccttatactctttaatttcagtatacactacacacacaaacacatttactttat 14599769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 4837272 - 4837128
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaa-tctctgtgtgttctt 113  Q
    |||||||||||||||  |||||| | ||||||||| |||||||||| ||||||||||||||||||||||  ||||||||||||| ||||||||| ||  |    
T  4837272 gagaggttatctcaaacatcataatagaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaaatctctgtgtattgat 4837173  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacac 158  Q
    |||||||||||||||||||||| |||| | |||||||||||||||    
T  4837172 tctctcttccctatactctttacttactgcatacacaacacacac 4837128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 6405100 - 6404957
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||| ||||||||||| |||| ||||  ||||||||||||||||| |||||||| ||     
T  6405100 gagaggttatctcaagcatcatattggaaactctcacaagattgtgaggagtggactagcccatattgtttgaaccactataaatctttgtgtgtttttc 6405001  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     ||||||||||||||| ||||||| ||| |||||| ||||||||    
T  6405000 ttctcttccctatactatttaatttcagcatacactacacacac 6404957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 41527090 - 41527260
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggga-gtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    ||||||||||||  || ||||||||||||||||||  ||||||||| || ||||||||||| ||||||| ||||||||||||||| | |||||||||||     
T  41527090 gagaggttatctttagcatcatagtggaaactctc--aagattgtgagaagtggactaacc-acattgggtgaaccactataaatttatgtgtgttcttc 41527186  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
     |||||||||||||||||||| |||| | | |||||||||||||   || |||||||||||||||| |||||||    
T  41527187 ttctcttccctatactctttacttactgcaaacacaacacacacaaacacatttactttattaaactgtttttg 41527260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 16210245 - 16210121
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||  | ||||||||||||||||||||||  |||||||||||||||||| ||||||  ||    
T  16210245 gagaggttatctcaagcatcatagtggaaactctcacaagatttagaggagtggactaacccacattggg-gaaccactataaatctctttgtgtttatt 16210147  T
Q  115 ctctcttccctatactctttaattac 140  Q
    ||||||||||||||||||||| ||||    
T  16210146 ctctcttccctatactctttacttac 16210121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 8841973 - 8842090
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||||||||| |||||||| |||||||||| |||||||||||||||| | ||| ||||||||||||||| || |||||||| |     
T  8841973 gagaggttatctcaagcatcatagtgaaaactctcacaagattgtgaggagtggactaacccatagtgggtgaaccactataaatttccgtgtgttcatc 8842072  T
Q  115 ctctcttccctatactct 132  Q
     |||||||||||||||||    
T  8842073 ttctcttccctatactct 8842090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 17420574 - 17420433
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||| ||||||||||||| |||| ||| | |||| |||||||||||||||||||||| ||||||||||||||| ||  |||||| ||     
T  17420574 gagaagttatctcaagcatcatagtggaaaatctcacaaaactgtgaggagtggactaacccacattgggtgaaccactataaatttc--tgtgtttttc 17420477  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     ||||||| || |||| |||| |||||||| |||||||||||||    
T  17420476 ttctcttctctttactatttacttacagtaaacacaacacacac 17420433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 16398038 - 16398141
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    ||||||||| |||||  ||||||||| |||||||| |||||| ||| |||||||||||| ||||||||| ||||||||||||||| ||||||||||||||    
T  16398038 gagaggttacctcaaacatcatagtgaaaactctcacaagatcgtgaggagtggactaaaccacattggatgaaccactataaatttctgtgtgttcttt 16398137  T
Q  115 ctct 118  Q
    ||||    
T  16398138 ctct 16398141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 26459209 - 26459352
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||  ||||||||||||| |||| ||| | |||| ||||||||||||||||||||||  |||||||||||||| |||||||||||||     
T  26459209 gagaagttatctcaaacatcatagtggaaaatctcacaaaactgtgaggagtggactaacccacattgggggaaccactataaatttctgtgtgttcttc 26459308  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     ||||||| || |||| | || |||||||| ||||||| |||||    
T  26459309 ttctcttctctttactatgtacttacagtaaacacaacccacac 26459352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 17162382 - 17162479
Alignment:
Q  19 aggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttc 115  Q
    ||||||||||||| ||||||||||||||||||  |||||| || ||||||||||| |||||||||| ||||||||||||| |||||||||| ||||||    
T  17162382 aggttatctcaagcatcatagtggaaactctcagaagattatgaggagtggactatcccacattgggtgaaccactataattctctgtgtgctctttc 17162479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 141; Significance: 4e-74; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 18208729 - 18208545
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  18208729 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttctgtgtgttcttt 18208630  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||  ||| |||||||||||||    
T  18208629 ctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaactatttatgtgtatgaactt 18208545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 18218067 - 18217883
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  18218067 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttctgtgtgttcttt 18217968  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||  ||| |||||||||||||    
T  18217967 ctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaactatttatgtgtatgaactt 18217883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 21682976 - 21683159
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  21682976 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttctgtgtgttcttt 21683075  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||| |||| |||||||||||||    
T  21683076 ctctcttccctatactctttaattacagtatacacaacacacacttacaca-ttactttattaaactgtttatgtgtatgaactt 21683159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 21754324 - 21754508
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  21754324 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactagcccacattgggtgaaccactataattctctgtgtgttcttt 21754423  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||  |||| || ||||||||||    
T  21754424 ctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaattgtttatgggtatgaactt 21754508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 21763611 - 21763795
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  21763611 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactagcccacattgggtgaaccactataattctctgtgtgttcttt 21763710  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||  |||| || ||||||||||    
T  21763711 ctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaattgtttatgggtatgaactt 21763795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 31917601 - 31917785
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||| ||||||| |||||||||| ||| ||||||| ||||| |||| ||||||||||||| ||||||||||||||||    
T  31917601 gagaggttatctcaagcatcatagtggcaactctcacaagattgtgaggattggactagcccacgttgggtgaaccactataattctctgtgtgttcttt 31917700  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |  ||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||    
T  31917701 ccttcttctctatactctttaattacagtatacacaacacacacttacacatttactttattaaactgtttttgtgtatgaactt 31917785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 17 - 199
Target Start/End: Complemental strand, 27578622 - 27578439
Alignment:
Q  17 agaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttc 115  Q
    ||||||||||||||| ||| |||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||| |||| ||||||||    
T  27578622 agaggttatctcaagcatcttagtggaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatctttgtgcgttctttc 27578523  T
Q  116 tctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    ||||||| |||||||||||||||| ||||||||||||| |||||| |  | |||||||||||||| ||||||||||||||||||    
T  27578522 tctcttctctatactctttaattagagtatacacaacatacacttacgcacttactttattaaactgtttttgtgtatgaactt 27578439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 30942756 - 30942582
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||  |    
T  30942756 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaattctctgtgtgttgat 30942657  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||| | |||||||||||||||   || |||||||||||||||| |||||||    
T  30942656 tctctcttccctatactctttacttactgcatacacaacacacacaaacacatttactttattaaactgtttttg 30942582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 30952178 - 30952004
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||  |    
T  30952178 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaattctctgtgtgttgat 30952079  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||| | |||||||||||||||   || |||||||||||||||| |||||||    
T  30952078 tctctcttccctatactctttacttactgcatacacaacacacacaaacacatttactttattaaactgtttttg 30952004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 37646798 - 37646624
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||  |    
T  37646798 gagaggttatctcaagcatcatagtggaaactctcaaaagattgtgaggagtggactaacccacattgggtgaaccactataaattctctgtgtgttgat 37646699  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||| | |||||||||||||||   || |||||||||||||||| |||||||    
T  37646698 tctctcttccctatactctttacttactgcatacacaacacacacaaacacatttactttattaaactgtttttg 37646624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 4037446 - 4037272
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||||  |    
T  4037446 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaattctctgtgtgtttat 4037347  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||| |||||||||||||||||   ||  |||| |||||||||| |||||||    
T  4037346 tctctcttccctatactctttatttactgtatacacaacacacacaaacacttttaatttattaaactgtttttg 4037272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 19887155 - 19886981
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| ||||||| |||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||||  |    
T  19887155 gagaggttatctcaagcatcatagaggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaattctctgtgtgttgat 19887056  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||| | |||||||||||||||   || |||||||||||||||| |||||||    
T  19887055 tctctcttccctatactctttacttactgcatacacaacacacacaaacacatttactttattaaactgtttttg 19886981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 22172719 - 22172545
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||  |    
T  22172719 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaattctctgtgtgtttat 22172620  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||  | |||||||||||||||   || |||||| ||||||||| |||||||    
T  22172619 tctctcttccctatactctttacttattgcatacacaacacacacaaacacatttaccttattaaactgtttttg 22172545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 34129956 - 34129782
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtgg-gagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||  |||||||||||||||||||||  |||||||||||||| |||||||||||  |    
T  34129956 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgacgagtggactaacccacattgggggaaccactataaattctctgtgtgttgat 34129857  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    ||||||||||||||| |||||| |||| | |||||||||||||||   || |||||||||||||||| |||||||    
T  34129856 tctctcttccctatattctttacttactgcatacacaacacacacagacacatttactttattaaactgtttttg 34129782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 37537687 - 37537513
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |||| ||||||  |    
T  37537687 gagaggttatctcaagcatcataatggaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaattctctatgtgttgat 37537588  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||| | |||||||||| ||||   || |||||||||||||||| |||||||    
T  37537587 tctctcttccctatactctttacttactgcatacacaacaaacacaaacacatttactttattaaactgtttttg 37537513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 18362066 - 18362250
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  18362066 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 18362165  T
Q  115 ctctcttccctatactctttaat-tacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| ||||||||||| || ||||||||||||||||||||||| ||  | ||||||||||||||  |||||| |||||||||    
T  18362166 ctttcttctctatactcttttatctacagtatacacaacacacacttacacttatactttattaaaca-attttgtttatgaactt 18362250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 18391023 - 18391207
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  18391023 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 18391122  T
Q  115 ctctcttccctatactctttaat-tacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| ||||||||||| || ||||||||||||||||||||||| ||  | ||||||||||||||  |||||| |||||||||    
T  18391123 ctttcttctctatactcttttatctacagtatacacaacacacacttacacttatactttattaaaca-attttgtttatgaactt 18391207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 36317236 - 36317379
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||||| |||||||||||     
T  36317236 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattggaggaaccactataaatctttgtgtgttcttc 36317335  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     |||||||||||| ||||||| || |||||||||| ||||||||    
T  36317336 ttctcttccctatcctctttattttcagtatacactacacacac 36317379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 27273648 - 27273474
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| ||||||| || ||||||||||||||||||||||  |||||||||||||| || ||||||||  |    
T  27273648 gagaggttatctcaagcatcatagtggaaactctcacaagattatgaggagtggactaacccacattgggggaaccactataaattctttgtgtgtttat 27273549  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||| |||||||||||||||||   ||  |||| |||||||||| |||||||    
T  27273548 tctctcttccctatactctttacttactgtatacacaacacacacaaacacttttaatttattaaactgtttttg 27273474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 26191295 - 26191111
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  26191295 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 26191196  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  26191195 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 26191111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 26201877 - 26201693
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  26201877 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 26201778  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  26201777 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 26201693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 33940109 - 33940293
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  33940109 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 33940208  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  33940209 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 33940293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 33950509 - 33950693
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  33950509 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 33950608  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  33950609 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 33950693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 37818388 - 37818532
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||| ||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||  |    
T  37818388 gagaggttctctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaattctctgtgtgtttat 37818487  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacac 158  Q
    |||||||||||||||||||||| |||  | |||||||||||||||    
T  37818488 tctctcttccctatactctttacttattgcatacacaacacacac 37818532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 13571146 - 13570972
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||| ||||||| |||||||||||||||||| |||||||||  |||||||||||||||||||||| ||||||||||||||| |||||||||||  |    
T  13571146 gagaggttctctcaagcatcatagtggaaactctcacaagattgtaaggagtggactaacccacattgggtgaaccactataaattctctgtgtgtttat 13571047  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||  | |||||||||||||||   || ||||||  |||||||| |||||||    
T  13571046 tctctcttccctatactctttacttattgcatacacaacacacacaaacacatttaccatattaaactgtttttg 13570972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 16 - 160
Target Start/End: Original strand, 32071229 - 32071375
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  32071229 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 32071328  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacactt 160  Q
    || ||||| |||||||| |||| ||||||||||||||||||||||||    
T  32071329 ctttcttctctatactcttttatttacagtatacacaacacacactt 32071375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 8764637 - 8764453
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||| ||||| ||||||||||||| ||| ||||||||||||    
T  8764637 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccatattgggtgaaccactataactctttgtgtgttcttt 8764538  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  8764537 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 8764453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 11410381 - 11410197
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    ||||||| |||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  11410381 gagaggtcatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattggatgaaccactataactctttgtgtgttcttt 11410282  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||| ||||||  |||||| |||||||||    
T  11410281 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttagtaaaca-attttgtttatgaactt 11410197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 19781392 - 19781517
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||| ||||||||||  ||    
T  19781392 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaatttctgtgtgttgatt 19781491  T
Q  115 ctctcttccctatactctttaattac 140  Q
    ||||||||||||||||||||| ||||    
T  19781492 ctctcttccctatactctttacttac 19781517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 23376231 - 23376088
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||||||| |||||||||| |||||||||| ||||||||||| |||| ||||| | ||||||||||||||| |||||||||||     
T  23376231 gagaggttatctcaagcatcataggggaaactctcacaagattgtgaggagtggactagcccatattgggttaaccactataaatctttgtgtgttcttc 23376132  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     |||||||||||||||||||||||  ||||||||| ||||||||    
T  23376131 ttctcttccctatactctttaattttagtatacactacacacac 23376088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 199
Target Start/End: Original strand, 27412940 - 27413121
Alignment:
Q  19 aggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttctc 117  Q
    ||||||||||||| ||| |||||||||||||| || ||||||| ||||||||||| |||||||| | ||||||||||||| ||| ||||||||||||||     
T  27412940 aggttatctcaagcatcttagtggaaactctcacaggattgtgaggagtggactagcccacattaggtgaaccactataactctttgtgtgttctttctt 27413039  T
Q  118 tcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||| ||||||  |||||| |||||||||    
T  27413040 tcttctctatactcttttatttacagtatacacaacacacacttacacttatactttagtaaaca-attttgtttatgaactt 27413121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 37298281 - 37298107
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    ||||| |||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||| ||  |||||||  |    
T  37298281 gagagtttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaattcttcgtgtgtttat 37298182  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||| ||||||||| |||  | |||||||||||||||   || |||||||||||||||| |||||||    
T  37298181 tctctcttccctgtactctttacttattgcatacacaacacacacaaacacatttactttattaaactgtttttg 37298107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 20948641 - 20948784
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||| ||||||||||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||     
T  20948641 gagaagttatctcaagcatcatagtggaaaatctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttctgtgtgttcttc 20948740  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     ||| |||  | |||| |||| |||||||| |||||||||||||    
T  20948741 ttcttttctttttactatttacttacagtaaacacaacacacac 20948784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 20959010 - 20959153
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||| ||||||||||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||     
T  20959010 gagaagttatctcaagcatcatagtggaaaatctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttctgtgtgttcttc 20959109  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     ||| |||  | |||| |||| |||||||| |||||||||||||    
T  20959110 ttcttttctttttactatttacttacagtaaacacaacacacac 20959153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 199
Target Start/End: Complemental strand, 42089972 - 42089790
Alignment:
Q  17 agaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtg---gactaacccacattggctgaaccactataaatctctgtgtgttct 112  Q
    ||||||||||||||| |||| ||||||||||||| |||||||||| ||||||   ||||||||||||| ||  |||||||||||||||||||||||||      
T  42089972 agaggttatctcaagcatca-agtggaaactctcacaagattgtgaggagtgctggactaacccacatcgggggaaccactataaatctctgtgtgttta 42089874  T
Q  113 ttctctcttccctatactctttaattacagtatacac-aacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    ||||||||||||||||||||||| |||| | | |||| ||||||||||| ||     || ||||||||| ||||||||||||||||||    
T  42089873 ttctctcttccctatactctttacttactgcaaacacaaacacacacttaca----caccttattaaactgtttttgtgtatgaactt 42089790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 20808026 - 20808201
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactat-aaatctctgtgtgttctt 113  Q
    |||||||||||||||| ||||| |||||||||||| ||||| |||| |||||||||||||||||||| |  |||||||||| |||| | ||||||||| |    
T  20808026 gagaggttatctcaagcatcatggtggaaactctcacaagagtgtgaggagtggactaacccacattcgaggaaccactataaaatttatgtgtgttcat 20808125  T
Q  114 tctctcttccctatactctttaattacagtatacac-aacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||| ||| |||| | | |||| |||||||||   || ||||||||| |||||| |||||||    
T  20808126 tctctcttccctatactcattacttactgcaaacacaaacacacacaaacacatttactttgttaaactgtttttg 20808201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 20897746 - 20897849
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||| ||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||| ||||| | | ||||||||||||    
T  20897746 gagaggttatctaaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccagtataactttttgtgtgttcttt 20897845  T
Q  115 ctct 118  Q
    ||||    
T  20897846 ctct 20897849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 22245400 - 22245525
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||| ||| | ||||||||| ||||||  |||||||||||||| | ||||||||  ||    
T  22245400 gagaggttatctcaagcatcatagtggaaactctcataagattgtgaggaattgactaacccgcattgggggaaccactataaatttgtgtgtgtttatt 22245499  T
Q  115 ctctcttccctatactctttaattac 140  Q
    |||||||||||||||| |||| ||||    
T  22245500 ctctcttccctatactatttacttac 22245525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 17 - 140
Target Start/End: Complemental strand, 204932 - 204808
Alignment:
Q  17 agaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttc 115  Q
    |||| |||||||||| | |||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||  ||||||| ||  |||    
T  204932 agagattatctcaagcaacatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaacttctgtgtattgattc 204833  T
Q  116 tctcttccctatactctttaattac 140  Q
     ||||||| ||||||||||| ||||    
T  204832 cctcttccttatactctttacttac 204808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 19547715 - 19547631
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat 99  Q
    |||| ||||||||||| ||||||||||||| |||| |||||||||| ||||||||||||||||||||||  ||||||||||||||    
T  19547715 gagaagttatctcaagcatcatagtggaaaatctcacaagattgtgaggagtggactaacccacattgggggaaccactataaat 19547631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 20904090 - 20904008
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataa 97  Q
    |||||||||||||||| |||||||| |||||| || |||||||| | |||||||||||||||||||||| |||||||||||||    
T  20904090 gagaggttatctcaagcatcatagttgaaactttcacaagattgggaggagtggactaacccacattgggtgaaccactataa 20904008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 141; Significance: 4e-74; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 4459167 - 4459351
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  4459167 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactagcccacattgggtgaaccactataattctctgtgtgttcttt 4459266  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| |||||||||||||    
T  4459267 ctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaactgtttatgtgtatgaactt 4459351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 4468792 - 4468976
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  4468792 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactagcccacattgggtgaaccactataattctctgtgtgttcttt 4468891  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| |||||||||||||    
T  4468892 ctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaactgtttatgtgtatgaactt 4468976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 5345904 - 5345720
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  5345904 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactagcccacattgggtgaaccactataattctctgtgtgttcttt 5345805  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| |||||||||||||    
T  5345804 ctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaactgtttatgtgtatgaactt 5345720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 5336052 - 5335868
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||| ||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  5336052 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtagactagcccacattgggtgaaccactataattctctgtgtgttcttt 5335953  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| |||||||||||||    
T  5335952 ctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaactgtttatgtgtatgaactt 5335868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 32935977 - 32935793
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||||||||||||||| || |||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  32935977 gagaggttatctcaagcatcatagtggaaactttcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttctgtgtgttcttt 32935878  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| |||||||||||||    
T  32935877 ctctcttccatatactctttaattacagtatacacaacacacacttacacatttactttattaaactgtttatgtgtatgaactt 32935793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 29424142 - 29424327
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||| | |||||||| |||||    
T  29424142 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactagcccacattgggtgaaccactataattatctgtgtgctcttt 29424241  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacag-tttttgtgtatgaactt 199  Q
    |  ||||| ||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||| ||||||| |||||||||    
T  29424242 ccttcttctctatactctttaattacagtatacacagcacacacttacacatttactttattaaacagttttttgtttatgaactt 29424327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 37862304 - 37862121
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    ||||||| |||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||  ||| |||||| |||||    
T  37862304 gagaggtcatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactatacttctttgtgtgctcttt 37862205  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| ||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||| ||| |||||    
T  37862204 ctttcttctctatactctttaattacagtatacacaacacacacttaca-ctttactttattaaacagtttttgtttataaactt 37862121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 24695772 - 24695591
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtgggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttc 115  Q
    |||||||||||||||| | |||||||||||||||| ||||||||||  ||||||||| ||||| |||| ||||||||||||| |||||||||||||||||    
T  24695772 gagaggttatctcaagcaccatagtggaaactctcacaagattgtg--agtggactagcccacgttgggtgaaccactataattctctgtgtgttctttc 24695675  T
Q  116 tctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
      ||||| |||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||  |||| |||||||||||||    
T  24695674 cttcttctctatactctttaattatagtatacacaacacacacttgcacattgactttattaaattgtttctgtgtatgaactt 24695591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 45191626 - 45191800
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||  |    
T  45191626 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaattctctgtgtgttgat 45191725  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||| | |||||||||||||||   || |||||||||||||||| |||||||    
T  45191726 tctctcttccctatactctttacttactgcatacacaacacacacaaacacatttactttattaaactgtttttg 45191800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 38929698 - 38929514
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| | |||||||||||||||| |||||||||| ||||||||||| ||||| |||| ||||||||||||| |||||||||||| |||    
T  38929698 gagaggttatctcaagcaccatagtggaaactctcacaagattgtgaggagtggactagcccacgttgggtgaaccactataattctctgtgtgtttttt 38929599  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |  ||||| |||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||| |||| ||  |||||||||    
T  38929598 ccttcttctctatactctttaattatagtttacacaacacacacttgcacatttactttattaaactgtttctgcatatgaactt 38929514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 16 - 180
Target Start/End: Complemental strand, 38957040 - 38956875
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| | |||||||||||||||| |||||||||| ||||||||||| ||||| |||| ||||||||||||| |||||||||||||| |    
T  38957040 gagaggttatctcaagcaccatagtggaaactctcacaagattgtgaggagtggactagcccacgttggatgaaccactataattctctgtgtgttctct 38956941  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaac 180  Q
    |  ||||| |||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||    
T  38956940 ccttcttctctatactctttaattatagtttacacaacacacacttgcacatttactttattaaac 38956875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 3604836 - 3604662
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||||  |    
T  3604836 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaattctctgtgtgttgat 3604737  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||| | |||| | |||||||||||||||   || |||||||||||||||| |||||||    
T  3604736 tctctcttccctatactcttcacttactgcatacacaacacacacaaacacatttactttattaaactgtttttg 3604662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 45015502 - 45015650
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| | |||||||||||||||| |||||||||| ||||||||||| ||||| |||| ||||||||||||| ||||||||||||||||    
T  45015502 gagaggttatctcaagcaccatagtggaaactctcacaagattgtgaggagtggactagcccacgttgggtgaaccactataattctctgtgtgttcttt 45015601  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgca 163  Q
    |  ||||| |||||||||||||||| |||||||||||||||||||||||    
T  45015602 ccttcttctctatactctttaattatagtatacacaacacacacttgca 45015650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 16901410 - 16901236
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||  |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||||  |    
T  16901410 gagaggttatctcaaccatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaattctctgtgtgttgat 16901311  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| ||||   |||||||||||||||   || |||||||||||||||| |||||||    
T  16901310 tctctcttccctatactctttacttactacatacacaacacacacaaacacatttactttattaaactgtttttg 16901236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 16994801 - 16994627
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||  |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||||  |    
T  16994801 gagaggttatctcaaccatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaattctctgtgtgttgat 16994702  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| ||||   |||||||||||||||   || |||||||||||||||| |||||||    
T  16994701 tctctcttccctatactctttacttactacatacacaacacacacaaacacatttactttattaaactgtttttg 16994627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 2997887 - 2997720
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  2997887 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 2997788  T
Q  115 ctctcttccctatactctttaat-tacagtatacacaacacacacttgcatatttactttattaaaca 181  Q
    || ||||| ||||||||||| || ||||||||||||||||||||||| ||  | ||||||||||||||    
T  2997787 ctttcttctctatactcttttatctacagtatacacaacacacacttacacttatactttattaaaca 2997720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 9501950 - 9501766
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  9501950 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 9501851  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  9501850 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 9501766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 9513316 - 9513132
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  9513316 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 9513217  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  9513216 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 9513132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 18652007 - 18652191
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  18652007 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 18652106  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  18652107 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 18652191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 18664125 - 18664309
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  18664125 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 18664224  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  18664225 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 18664309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 16 - 160
Target Start/End: Original strand, 17489479 - 17489625
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  17489479 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 17489578  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacactt 160  Q
    || ||||| |||||||| |||| ||||||||||||||||||||||||    
T  17489579 ctttcttctctatactcttttatttacagtatacacaacacacactt 17489625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 22678940 - 22678766
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| || ||||||||||||||| |||||||||| |||||||||||||||||||||   |||||||||||||| |||||||||||  |    
T  22678940 gagaggttatctcaagcattatagtggaaactctcacaagattgtgaggagtggactaacccacattgagggaaccactataaattctctgtgtgttgat 22678841  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||  | |||||||||||||||   || ||| |||||||||||| |||||||    
T  22678840 tctctcttccctatactctttacttattgcatacacaacacacacaaacacattcactttattaaactgtttttg 22678766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 27159194 - 27159051
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||| ||||||||||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||     
T  27159194 gagaagttatctcaagcatcatagtggaaaatctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttctgtgtgttcttc 27159095  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     ||||||| || |||| |||| |||||||| |||||||||||||    
T  27159094 ttctcttctctttactatttacttacagtaaacacaacacacac 27159051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 27169542 - 27169399
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||| ||||||||||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||     
T  27169542 gagaagttatctcaagcatcatagtggaaaatctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttctgtgtgttcttc 27169443  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     ||||||| || |||| |||| |||||||| |||||||||||||    
T  27169442 ttctcttctctttactatttacttacagtaaacacaacacacac 27169399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 22671800 - 22671627
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| || ||||||||||||||| |||||||||| ||||||||||||||||||||||  |||| ||||||||| |||||||||||  |    
T  22671800 gagaggttatctcaagcattatagtggaaactctcacaagattgtgaggagtggactaacccacattggg-gaacgactataaattctctgtgtgttgat 22671702  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||  | |||||||||||||||   || ||| |||||||||||| |||||||    
T  22671701 tctctcttccctatactctttacttattgcatacacaacacacacaaacacattcactttattaaactgtttttg 22671627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 28451116 - 28451241
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||| | ||||||||  ||    
T  28451116 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaatttatgtgtgttgatt 28451215  T
Q  115 ctctcttccctatactctttaattac 140  Q
    ||||||||||||||||||||| ||||    
T  28451216 ctctcttccctatactctttacttac 28451241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 69363 - 69220
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||  |||||||| |||| |||| |||||||||| ||||||||||| || ||||||| | |||||||||||||||||||||||||||     
T  69363 gagaggttatctcaaacatcatagttgaaattctcacaagattgtgaggagtggactagccaacattggataaaccactataaatctctgtgtgttcttc 69264  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     |||||||| || |||||||| ||||||||||||||||||||||    
T  69263 ttctcttccatacactctttatttacagtatacacaacacacac 69220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 44637846 - 44637672
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaa-tctctgtgtgttctt 113  Q
    |||||||||||||||  |||| ||||||||||||| |||||||||| ||||||| ||||||||||||||  ||||||||| ||| ||||| ||| ||  |    
T  44637846 gagaggttatctcaaacatcaaagtggaaactctcacaagattgtgaggagtgggctaacccacattgggggaaccactacaaaatctctatgttttgat 44637747  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||| | |||||||||||||||   || |||||||||||||||| |||||||    
T  44637746 tctctcttccctatactctttacttactgcatacacaacacacacaaacacatttactttattaaactgtttttg 44637672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 22902929 - 22903072
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||| ||||||||||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||     
T  22902929 gagaagttatctcaagcatcatagtggaaaatctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttctgtgtgttcttc 22903028  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     ||||||| || |||| |||| ||||| |  |||||||||||||    
T  22903029 ttctcttctctttactatttacttacaatcaacacaacacacac 22903072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 22908065 - 22907922
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||| |||||| |||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||||| | |||||||||||     
T  22908065 gagaagttatctcaagcatcataatggaaaatctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttatgtgtgttcttc 22907966  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     |||| || || ||||||||| |||||||| |||||||||||||    
T  22907965 ttctcctctctttactctttacttacagtaaacacaacacacac 22907922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 21110004 - 21110170
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||| ||||||||| |||||||| | |||||||||||  ||||||||| |||||||||| |    ||| ||| ||| ||    
T  21110004 gagaggttatctcaagcatcatagttgaaactctcacaagattgcgaggagtggactagtccacattgggtgaaccactaaa----tctttgtattcctt 21110099  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagttt 185  Q
    |||| || |||||||||||||||| |||||||||| |||||||    |||||||| |||||||||||||||    
T  21110100 ctctttttcctatactctttaatttcagtatacactacacacataaacatatttattttattaaacagttt 21110170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 19343105 - 19343248
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||| ||  ||||||||  ||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||||| | |||||||||||     
T  19343105 gagaagttatctaaatcatcatagtcaaaaatctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttatgtgtgttcttc 19343204  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     ||||||| || ||||||||  ||| |||| |||||||||||||    
T  19343205 ttctcttctctttactctttgcttatagtaaacacaacacacac 19343248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 41026095 - 41025962
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtgg-gagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||| ||||||| |||||  ||||||||||| ||||||||||  ||||||||||||||||||||| ||||||||||||| ||| |||| | ||||     
T  41026095 gagaggttgtctcaagcatcatgatggaaactctcgcaagattgtgaagagtggactaacccacattggatgaaccactataactctttgtgcgctctt- 41025997  T
Q  115 ctctcttccctatactc-tttaattacagtatacac 149  Q
     |||||||||| ||||| ||||||||||||| ||||    
T  41025996 -tctcttccctttactcttttaattacagtaaacac 41025962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 40408209 - 40408067
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||  |||||| |||||| |||| |||||||||| |||||||||||  ||||||||  | ||||||||||||| | ||| ||| |||     
T  40408209 gagaggttatctcaaacatcataatggaaaatctcacaagattgtgaggagtggactagaccacattgaataaaccactataaat-tttgtctgtacttc 40408111  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     ||| |||| || |||||||| |||||||| |||||||||||||    
T  40408110 ttcttttccttacactctttatttacagtaaacacaacacacac 40408067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 12571386 - 12571452
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacatt 81  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  12571386 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgagtagtggactaacccacatt 12571452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 86 - 188
Target Start/End: Original strand, 12580178 - 12580281
Alignment:
Q  86 gaaccactataaatctctgtgtgttctttctctcttccctatactctttaattacagtatacac-aacacacacttgcatatttactttattaaacagtt 184  Q
    |||||||||||||| ||||||||||  ||||||||||||||||||||||| |||| | | |||| |||||||||   || ||||||||| |||||| |||    
T  12580178 gaaccactataaatttctgtgtgttgattctctcttccctatactctttacttactgcaaacacaaacacacacaaacacatttactttgttaaactgtt 12580277  T
Q  185 tttg 188  Q
    ||||    
T  12580278 tttg 12580281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 38461292 - 38461430
Alignment:
Q  19 aggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttct-ttct 116  Q
    ||||| ||||||| |||||||||||||||||| ||   ||||| |||||||| ||  ||||||||| ||||||| ||||| ||| |||||||||| ||||    
T  38461292 aggttgtctcaagcatcatagtggaaactctcacag--ttgtgaggagtggattagtccacattggatgaaccaatataattct-tgtgtgttctattct 38461388  T
Q  117 ctct-tccctatactctttaattacagtatacacaacacacac 158  Q
     ||| || |||||||||||| |||||||||||||| |||||||    
T  38461389 -tctatctctatactctttacttacagtatacacatcacacac 38461430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 15474749 - 15474683
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgt-gggagtggactaacccacatt 81  Q
    |||| ||||||||||| ||||||||||||| |||| |||||||||  ||||||||||||||||||||    
T  15474749 gagaagttatctcaagcatcatagtggaaaatctcacaagattgtaaggagtggactaacccacatt 15474683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 22146568 - 22146707
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    ||||| |||||||||| ||||||||||||| |||  |||||||||| | |||||| ||||| ||||| | |||||  ||||||||   |||||||| ||     
T  22146568 gagagattatctcaagcatcatagtggaaattcttacaagattgtgagaagtggattaacctacattagatgaactgctataaat---tgtgtgttattc 22146664  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     |||||||| |||||||||  ||| ||| | |||||||||||||    
T  22146665 ttctcttccttatactcttacatt-caggaaacacaacacacac 22146707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0591 (Bit Score: 133; Significance: 3e-69; HSPs: 2)
Name: scaffold0591
Description:

Target: scaffold0591; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 3 - 187
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  3 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactagcccacattgggtgaaccactataattctctgtgtgttcttt 102  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||  |||| || ||||||||||    
T  103 ctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaaatgtttatgagtatgaactt 187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0591; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 1739 - 1882
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||| |||||||||||||||||| |||||||||| ||||| ||||| ||||||||   ||||||||||||||||| |||||||||||     
T  1739 gagaagttatctcaagcatcatagtggaaactctcacaagattgtgaggagttgactagcccacattcagtgaaccactataaatctttgtgtgttcttc 1838  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     |||||||| ||||||||||| || |||||||||| ||||||||    
T  1839 ttctcttccttatactctttattttcagtatacactacacacac 1882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 129; Significance: 6e-67; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 24 - 199
Target Start/End: Complemental strand, 30926 - 30751
Alignment:
Q  24 atctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttctctcttc 122  Q
    |||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  30926 atctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttctgtgtgttctttctctcttc 30827  T
Q  123 cctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||||||||||||||||||||||||| || | |||||||||||||| |||| |||||||||||||    
T  30826 cctatactctttaattacagtatacacaacacacacttacaca-ttactttattaaactgtttatgtgtatgaactt 30751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 6e-67; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 29541235 - 29541419
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||||||||| |||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||| ||||| ||||||||||    
T  29541235 gagaggttatctcaagcatcatagtgaaaactctcacaagattgtgaggagtggactagcccacattgggtgaaccactataattctctatgtgttcttt 29541334  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |  ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  29541335 ccttcttctctatactctttaattacagtatacacaacacacacttgcacatttactttattaaacagtttttgtttatgaactt 29541419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 16 - 200
Target Start/End: Original strand, 18202336 - 18202521
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||   ||||||||||| ||||||||||||  ||    
T  18202336 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattggggaaaccactataattctctgtgtgtttatt 18202435  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaacttt 200  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||| ||||||    
T  18202436 ctctcttacctatactctttaattacagtatacacaacacacacttacacatttactttattaaactgtttttgtgtattaacttt 18202521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 20968631 - 20968815
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| | |||||||||||||||| |||||||||| ||||||||||| ||||| |||| ||||||||||||| ||||||||| ||||||    
T  20968631 gagaggttatctcaagcaccatagtggaaactctcacaagattgtgaggagtggactagcccacgttgggtgaaccactataattctctgtgtattcttt 20968730  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |  ||||| |||||||||||||||| | ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  20968731 ccttcttctctatactctttaattataatatacacaacacacacttgcacatttactttattaaactgtttttgtgtatgaactt 20968815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 12989131 - 12988957
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||  |    
T  12989131 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaattctctgtgtgttgat 12989032  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||| | |||||||||||||||   || |||||||||||||||| |||||||    
T  12989031 tctctcttccctatactctttacttactgcatacacaacacacacaaacacatttactttattaaactgtttttg 12988957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 790296 - 790153
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| ||| |||||| ||||||||||||||||||||||  |||||||||||||||| ||||||| ||||    
T  790296 gagaggttatctcaagcatcatagtggaaactctcacaaaattgtgaggagtggactaacccacattggaggaaccactataaatctttgtgtgtccttt 790197  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
    |||||||||||||||||||||||| |||||||||| ||||||||    
T  790196 ctctcttccctatactctttaatttcagtatacaccacacacac 790153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 26019682 - 26019508
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaa-tctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  ||||||||||||| |||| |||||||  |    
T  26019682 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaactctccgtgtgttgat 26019583  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||| | |||||||||||||||   || |||||||||||||||| |||||||    
T  26019582 tctctcttccctatactctttacttactgcatacacaacacacacaaacacatttactttattaaactgtttttg 26019508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 1597948 - 1598121
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaa-tctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||| |||| |||||||  |    
T  1597948 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaattctcggtgtgttgat 1598047  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||| | |||||||||||||||    | |||||||||||||||| |||||||    
T  1598048 tctctcttccctatactctttacttactgcatacacaacacacac-aaaacatttactttattaaactgtttttg 1598121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 3286635 - 3286819
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  3286635 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 3286734  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||||||  |||||| |||||||||    
T  3286735 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaaaca-attttgtttatgaactt 3286819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 16898735 - 16898919
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  16898735 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 16898834  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||||||  |||||| |||||||||    
T  16898835 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaaaca-attttgtttatgaactt 16898919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 16909388 - 16909572
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  16909388 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 16909487  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||||||  |||||| |||||||||    
T  16909488 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaaaca-attttgtttatgaactt 16909572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 18160850 - 18161034
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  18160850 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 18160949  T
Q  115 ctctcttccctatactctttaat-tacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| ||||||||||| || ||||||||||||||||||||||| ||  | ||||||||||||||  |||||| |||||||||    
T  18160950 ctttcttctctatactcttttatctacagtatacacaacacacacttacacttatactttattaaaca-attttgtttatgaactt 18161034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 18170662 - 18170846
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  18170662 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 18170761  T
Q  115 ctctcttccctatactctttaat-tacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| ||||||||||| || ||||||||||||||||||||||| ||  | ||||||||||||||  |||||| |||||||||    
T  18170762 ctttcttctctatactcttttatctacagtatacacaacacacacttacacttatactttattaaaca-attttgtttatgaactt 18170846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 20913071 - 20913255
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  20913071 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 20913170  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||||||  |||||| |||||||||    
T  20913171 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaaaca-attttgtttatgaactt 20913255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 12455842 - 12456026
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  12455842 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 12455941  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  12455942 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 12456026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 14792391 - 14792575
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  14792391 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactatcccacattgggtgaaccactataactctttgtgtgttcttt 14792490  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||| ||||||  |||||| |||||||||    
T  14792491 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttagtaaaca-attttgtttatgaactt 14792575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 24921270 - 24921086
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  24921270 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 24921171  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || || || |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||||||  |||||| |||||||||    
T  24921170 ctttcctctctatactcttttatttacagtatacacaacacacacttacacttatactttattaaaca-attttgtttatgaactt 24921086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 24930306 - 24930122
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  24930306 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 24930207  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || || || |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||||||  |||||| |||||||||    
T  24930206 ctttcctctctatactcttttatttacagtatacacaacacacacttacacttatactttattaaaca-attttgtttatgaactt 24930122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 179
Target Start/End: Complemental strand, 30657152 - 30656987
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||   |||||||||||||| |||||||||||  |    
T  30657152 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgagggaaccactataaattctctgtgtgttgat 30657053  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaa 179  Q
    |||||||||||||||||||||| |||| | |||||||||||||||   || ||||| |||||||||    
T  30657052 tctctcttccctatactctttacttactgcatacacaacacacacaaacacatttattttattaaa 30656987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 31358350 - 31358534
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  31358350 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 31358449  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  31358450 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 31358534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 31368080 - 31368264
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  31368080 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 31368179  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  31368180 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 31368264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 22222754 - 22222611
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||| ||||||||  |||||||||||||||| |||| ||||||     
T  22222754 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaactcacattgggggaaccactataaatctttgtgcgttcttc 22222655  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     |||||||||||||||||||| || |||||||||| ||||||||    
T  22222654 ttctcttccctatactctttattttcagtatacactacacacac 22222611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 22248589 - 22248446
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||| ||||||||  |||||||||||||||| |||| ||||||     
T  22248589 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaactcacattgggggaaccactataaatctttgtgcgttcttc 22248490  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     |||||||||||||||||||| || |||||||||| ||||||||    
T  22248489 ttctcttccctatactctttattttcagtatacactacacacac 22248446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 16322111 - 16322236
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  ||||||| |||||||||||||||||  ||    
T  16322111 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccaccataaatctctgtgtgtttatt 16322210  T
Q  115 ctctcttccctatactctttaattac 140  Q
    ||||||||| ||||||||||| ||||    
T  16322211 ctctcttccttatactctttacttac 16322236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 16334259 - 16334384
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  ||||||| |||||||||||||||||  ||    
T  16334259 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccaccataaatctctgtgtgtttatt 16334358  T
Q  115 ctctcttccctatactctttaattac 140  Q
    ||||||||| ||||||||||| ||||    
T  16334359 ctctcttccttatactctttacttac 16334384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 18705597 - 18705472
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||| ||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||| ||||||||||  ||    
T  18705597 gagaggttatctcaagcatcatagttgaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaatttctgtgtgtttatt 18705498  T
Q  115 ctctcttccctatactctttaattac 140  Q
    ||||||||||||||||||||| ||||    
T  18705497 ctctcttccctatactctttacttac 18705472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 18711532 - 18711407
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||| ||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||| ||||||||||  ||    
T  18711532 gagaggttatctcaagcatcatagttgaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaatttctgtgtgtttatt 18711433  T
Q  115 ctctcttccctatactctttaattac 140  Q
    ||||||||||||||||||||| ||||    
T  18711432 ctctcttccctatactctttacttac 18711407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 17826641 - 17826762
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| ||||| |||| ||||||||||||| ||||||||||||||||    
T  17826641 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactagcccacgttgggtgaaccactataattctctgtgtgttcttt 17826740  T
Q  115 ctctcttccctatactctttaa 136  Q
    |  ||||| |||||||||||||    
T  17826741 ccttcttctctatactctttaa 17826762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 19363858 - 19364001
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggga-gtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||||||||| |||||||| ||| |||||| || |||||||||||||||||||  |||||||||||||| | |||||||||||     
T  19363858 gagaggttatctcaagcatcatagtgaaaactctcacaatattgtgagaagtggactaacccacattgggcgaaccactataaatttatgtgtgttcttc 19363957  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     ||||||| |||||||||||| || ||||| |||||||||||||    
T  19363958 ttctcttctctatactctttactttcagtaaacacaacacacac 19364001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 7753996 - 7753822
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctct-gtgtgttctt 113  Q
    |||||||||||| ||  ||||||| |||||||| | |||||||||| |||||||||||||||||||||| ||||||||||||||| | | |||||||  |    
T  7753996 gagaggttatctaaaacatcatagaggaaactcacacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttgttgtgtgttgat 7753897  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||||||||||||||| |||| | |||||||||||||||   || ||||| |||||||| | |||||||    
T  7753896 tctctcttccctatactctttacttactgcatacacaacacacacaaacacatttattttattaagctgtttttg 7753822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 22 - 158
Target Start/End: Original strand, 18335709 - 18335845
Alignment:
Q  22 ttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttctctct 120  Q
    |||||| ||| ||||||||||||| |||| |||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||||||||| |||||    
T  18335709 ttatcttaagcatcatagtggaaaatctcacaagattgtgaggagtggactaacccacattggttgaacctctataaatttctgtgtgttctttttctct 18335808  T
Q  121 tccctatactctttaattacagtatacacaacacacac 158  Q
    || || ||||||||| ||||| || |||||||||||||    
T  18335809 tctct-tactctttacttacaataaacacaacacacac 18335845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 16 - 135
Target Start/End: Original strand, 26169204 - 26169322
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||||||  |||||||||||||||||  ||||||  ||    
T  26169204 gagaggttatctcaagcatcatagtggagactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaatctc--tgtgtttatt 26169301  T
Q  115 ctctcttccctatactcttta 135  Q
    |||||||||||||||||||||    
T  26169302 ctctcttccctatactcttta 26169322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 20 - 158
Target Start/End: Original strand, 15504229 - 15504368
Alignment:
Q  20 ggttatctcaagtatcatagtggaaactctctcaagattgtggga-gtggactaacccacattggctgaaccactataaatctctgtgtgttctttctct 118  Q
    |||||||||||| |||||||||||||||||| ||||||||||||| |||||||| |||| ||| | |||||| |||||||||| ||||||||| ||||||    
T  15504229 ggttatctcaagcatcatagtggaaactctcacaagattgtgggaagtggactagcccatattaggtgaacctctataaatctttgtgtgttccttctct 15504328  T
Q  119 cttccctatactctttaattacagtatacacaacacacac 158  Q
    ||| | | |||||||||||| |||||| ||| ||||||||    
T  15504329 cttgcatgtactctttaatttcagtatgcactacacacac 15504368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 34766147 - 34766285
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||| ||||||||||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||||      
T  34766147 gagaagttatctcaagcatcatagtggaaaatctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttatgtgtgttct-- 34766244  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
       ||||| || |||| |||| |||||||| |||||||||||||    
T  34766245 ---tcttctctttactatttacttacagtaaacacaacacacac 34766285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 24692600 - 24692737
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||| ||||||||||||| |||| |||||||||| ||||| |||||||||||||||| ||||||||||||||| | ||||||||||      
T  24692600 gagaagttatctcaagcatcatagtggaaaatctcacaagattgtgaggagttgactaacccacattgggtgaaccactataaatttatgtgtgttct-- 24692697  T
Q  115 ctctcttccctatactctttaattacagtatacacaacaca 155  Q
     ||||||| || ||||||||| |||| ||| ||||||||||    
T  24692698 -tctcttctctttactctttacttacggtaaacacaacaca 24692737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 63 - 188
Target Start/End: Complemental strand, 24502802 - 24502678
Alignment:
Q  63 gagtggactaacccacattggctgaaccactataaatctctgtgtgttctttctctcttccctatactctttaattacagtatacacaacacacacttgc 162  Q
    |||||||||||||||||||||  |||||||||||||| ||| ||||||  ||||||||||||||||||||||| |||| | |||||||||||||||   |    
T  24502802 gagtggactaacccacattgggggaaccactataaat-tctctgtgttgattctctcttccctatactctttacttactgcatacacaacacacacaaac 24502704  T
Q  163 atatttactttattaaacagtttttg 188  Q
    | |||||||||||||||| |||||||    
T  24502703 acatttactttattaaactgtttttg 24502678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 9034205 - 9034322
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||  |||||||||||||||| | |||||||||| ||||||||||||| |||||||| ||||||||||||||| | |||||||||||     
T  9034205 gagaggttatctcaaacatcatagtggaaactcccacaagattgtgtggagtggactaactcacattgggtgaaccactataaatttatgtgtgttctt- 9034303  T
Q  115 ctctcttccctatactcttt 134  Q
     |||||||||| ||||||||    
T  9034304 -tctcttccctttactcttt 9034322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 8562574 - 8562431
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||| ||||||||||||| |||| ||| | |||| ||||||||||||||||||||||  |||||| ||||||| |||||||||||||     
T  8562574 gagaagttatctcaagcatcatagtggaaaatctcacaaaactgtgaggagtggactaacccacattgggggaaccaatataaatttctgtgtgttcttc 8562475  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     ||||||| || |||| |||| ||||| || |||||||||||||    
T  8562474 ttctcttctctttactatttacttacaataaacacaacacacac 8562431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 27786779 - 27786666
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||| ||||| |||| |||||||| ||| || ||||| |||    
T  27786779 gagaggttatctcaagtatcatagtggaaactctcacaagattgtgaggagtggactagcccatattggatgaatcactataattct-tg-gtgtttttt 27786682  T
Q  115 ctctcttccctatact 130  Q
    ||||||||| ||||||    
T  27786681 ctctcttccttatact 27786666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 158
Target Start/End: Original strand, 28093420 - 28093554
Alignment:
Q  24 atctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttctctcttc 122  Q
    |||||||| |||| |||| ||| |||| |||||||||| |||||||| || ||||  || | ||||||||||||||| | ||||| |||||  |||||||    
T  28093420 atctcaagcatcacagtgaaaattctcacaagattgtgaggagtggattagcccatgttaggtgaaccactataaatttatgtgtcttcttcttctcttc 28093519  T
Q  123 cctatactctttaattacagtatacacaacacacac 158  Q
    | |||||| |||| |||||||| |||||||||||||    
T  28093520 cttatact-tttacttacagtaaacacaacacacac 28093554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 26169438 - 26169500
Alignment:
Q  71 taacccacattggctgaaccactataaatctctgtgtgttctttctctcttccctatactcttta 135  Q
    |||||||||||||  |||||||||||||||||  ||||||  |||||||||||||||||||||||    
T  26169438 taacccacattgggggaaccactataaatctc--tgtgtttattctctcttccctatactcttta 26169500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 8926 - 9100
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||||  |    
T  8926 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaattctctgtgtgttgat 9025  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||    
T  9026 tctctcttccctatactctttaattacagtatacacaacacacacttacacatttactttattaaactgtttttg 9100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 117; Significance: 9e-60; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 285 - 101
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||| ||||| ||||| |||| |||||||| |||| ||||||||||||||||    
T  285 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagttgactagcccacgttgggtgaaccacaataattctctgtgtgttcttt 186  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |  ||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||  ||||||||||||||||||    
T  185 ccttcttctctatactctttaattacagtatacacaacacacacttacacatttactttattaaattgtttttgtgtatgaactt 101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 17 - 199
Target Start/End: Complemental strand, 1235 - 1052
Alignment:
Q  17 agaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttc 115  Q
    ||||||||||||||| |||||||||||||||||| |||||||||  ||||||||||| ||||| |||| ||||||||||||| ||||| ||||||||||     
T  1235 agaggttatctcaagcatcatagtggaaactctcacaagattgttaggagtggactatcccacgttgggtgaaccactataattctctatgtgttctttg 1136  T
Q  116 tctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
      ||||| ||||||| ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||    
T  1135 cttcttctctatactatttaattacagtatacacaacacacacttacacatttactttattaaactgtttttgtgtatgaactt 1052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0611 (Bit Score: 109; Significance: 5e-55; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 8900 - 9084
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||  | ||||||| |||||||| |||||||||| |||||||||||  |||| |||| ||||||||||||| ||||||||||||||||    
T  8900 gagaggttatctcaaacaccatagtgaaaactctcacaagattgtgaggagtggactagtccacgttgggtgaaccactataattctctgtgtgttcttt 8999  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |  ||||| |||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  9000 ccttcttctctattctctttaattatagtatacacaacacacacttgcacatttactttattaaactgtttttgtgtatgaactt 9084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 19 - 199
Target Start/End: Complemental strand, 92154 - 91973
Alignment:
Q  19 aggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttctc 117  Q
    ||||||||||||| | |||||||||||||||| |||||||||| ||||||||||| | ||| |||| ||||||||||||| |||||||||||||||||      
T  92154 aggttatctcaagcaccatagtggaaactctcacaagattgtgaggagtggactagctcacgttgggtgaaccactataattctctgtgtgttctttcct 92055  T
Q  118 tcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    ||||| || ||||||||||||| |||||||||||||||||||| || |||||||||||||||| | ||||||||||||||||    
T  92054 tcttctctttactctttaattatagtatacacaacacacacttacacatttactttattaaactgcttttgtgtatgaactt 91973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 147496 - 147680
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||  ||||||||   |||||||  ||||||||| |||||||||||||| ||||||| ||||||||||||| ||| |||||| |||||    
T  147496 gagaggttatctcaaacatcatagtaataactctcagaagattgtgaggagtggactaaccgacattggatgaaccactataattctttgtgtgctcttt 147595  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||| |||||    
T  147596 ctttcttctctatactctttaattacagtatacacaacacacacttacacatttactttattaaacagtttttgtttataaactt 147680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 233268 - 233084
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  233268 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 233169  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||||||  |||||| |||||||||    
T  233168 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaaaca-attttgtttatgaactt 233084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 16 - 195
Target Start/End: Original strand, 150 - 328
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| | |||||||||||||||| |||||||||| ||||||||||| ||||| |||| ||||||||||||| ||||||||||||||||    
T  150 gagaggttatctcaagcaccatagtggaaactctcacaagattgtgaggagtggactagcccacgttgggtgaaccactataattctctgtgtgttcttt 249  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatga 195  Q
    |  ||||| |||||||||||||||| ||||||||||  ||||||||||| ||| |||||||||||| |||| |||||||||    
T  250 ccttcttctctatactctttaattatagtatacaca--acacacttgcacattgactttattaaactgtttctgtgtatga 328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 74006 - 73821
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    ||||| |||||||||| | |||||||||||||||| |||||||||| ||||||||||||||||| |||| ||||||||||||| ||||||||||||||||    
T  74006 gagagattatctcaagcaccatagtggaaactctcacaagattgtgaggagtggactaacccacgttgggtgaaccactataattctctgtgtgttcttt 73907  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagttt-ttgtgtatgaactt 199  Q
    |  ||||| ||||||||||||| || |||||||||||||||||| |||| ||||| |||||||||  |||| ||||||||||||||    
T  73906 ccttcttctctatactctttaactatagtatacacaacacacacctgcacatttaatttattaaattgtttcttgtgtatgaactt 73821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 180
Target Start/End: Complemental strand, 395138 - 394972
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||| || ||||||||  |    
T  395138 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaattctttgtgtgttgat 395039  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaac 180  Q
    |||||||||||||||||||||| |||| | |||||||||||||||   |||||||||||||||||||    
T  395038 tctctcttccctatactctttacttactgcatacacaacacacacaaacatatttactttattaaac 394972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 7122 - 6938
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  7122 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 7023  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || ||||| |||||||| |||| |||||||||||||||||||||||| ||  | ||||||||||| ||  |||||| |||||||||    
T  7022 ctttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaagca-attttgtttatgaactt 6938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 16 - 180
Target Start/End: Complemental strand, 20333 - 20167
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactat-aaatctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||| ||||||||| |||||  |    
T  20333 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaaatctctgcgtgttgat 20234  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaac 180  Q
    ||||||||||||||||||||||  ||  | |||||||||||||||   || ||||||||||||||||    
T  20233 tctctcttccctatactctttacatattgcatacacaacacacacaaacacatttactttattaaac 20167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 19560 - 19685
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||| | |||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||  ||    
T  19560 gagaggttatctcaggcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaatctctgtgtgtttatt 19659  T
Q  115 ctctcttccctatactctttaattac 140  Q
    ||||||||||||||||||||| ||||    
T  19660 ctctcttccctatactctttacttac 19685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 84; Significance: 4e-40; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 16234 - 16377
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||||||| |||||||||| |||||||||| ||||||||||| |||| ||||| | ||||||||||||||| |||||||||||     
T  16234 gagaggttatctcaagcatcataggggaaactctcacaagattgtgaggagtggactagcccatattgggttaaccactataaatctttgtgtgttcttc 16333  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     |||||||||||||||||||||||  ||||||||| ||||||||    
T  16334 ttctcttccctatactctttaattttagtatacactacacacac 16377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 49496 - 49322
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| ||||| |||  || |||||||||||||||||||  |||||||||||||| |||||||||||  |    
T  49496 gagaggttatctcaagcatcatagtggaaactctcacaagactgtaaggtgtggactaacccacattgggggaaccactataaattctctgtgtgttgat 49397  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    | |||||||||||||||||||| |||| | |||||||||||||||   || |||||||||||||||  |||||||    
T  49396 tttctcttccctatactctttacttactgcatacacaacacacacaaacacatttactttattaaagtgtttttg 49322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 28292 - 28118
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaa-tctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| ||||| |||| ||||||||||||||||||||||  ||||||||||||| ||| ||||||||  |    
T  28292 gagaggttatctcaagcatcatagtggaaactctcacaagactgtgaggagtggactaacccacattgggggaaccactataaattctatgtgtgttgat 28193  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    | |||||||||| ||||||||| |||| | |||||||||||||||      |||||||||||||||| |||||||    
T  28192 tttctcttccctttactctttacttactgcatacacaacacacacaaattcatttactttattaaactgtttttg 28118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 111047 - 110873
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaat-ctctgtgtgttctt 113  Q
    |||||||||||||||| ||||||||| ||| |||| |||||||||| ||||||||||||||||||||||  |||||||||||||| |||| ||||||  |    
T  111047 gagaggttatctcaagcatcatagtgaaaaatctcacaagattgtgaggagtggactaacccacattgggggaaccactataaattctctttgtgtttat 110948  T
Q  114 tctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    |||||||||| ||||||||||| |||| | |||||||||||||||   || |||||||| ||||||| |||||||    
T  110947 tctctcttccatatactctttacttactgcatacacaacacacacaaacacatttacttaattaaactgtttttg 110873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 19757 - 19900
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||| ||||||||||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||     
T  19757 gagaagttatctcaagcatcatagtggaaaatctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttctgtgtgttcttc 19856  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     ||||||  || |||| |||| |||||||| |||||||||||||    
T  19857 ttctcttttctttactatttacttacagtaaacacaacacacac 19900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 217450 - 217609
Alignment:
Q  17 agaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttc 115  Q
    |||||||||||||||||||||||| |||||||||  | ||||||| ||||||||| | |||||||| | ||||||||||||||| | |||||||||||||    
T  217450 agaggttatctcaagtatcatagttgaaactctcataggattgtgaggagtggaccagcccacattaggtgaaccactataaatatttgtgtgttctttc 217549  T
Q  116 tctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttat 175  Q
    | |||||| |||||||||||||| |||||||||| ||||||||   || |||||||||||    
T  217550 tttcttccttatactctttaatttcagtatacactacacacacaaacacatttactttat 217609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 309299 - 309115
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| |||||||||||||  || ||||||||||||    
T  309299 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataacgctttgtgtgttcttt 309200  T
Q  115 ctctcttccctatactctt-taattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    || |||||  |||||| || || |||||||||||||||||||||||| ||  | ||||||| ||||||  |||||| |||||||||    
T  309199 ctttcttctatatactattctatttacagtatacacaacacacacttacacttatactttagtaaaca-attttgtttatgaactt 309115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 119 - 1
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaa-tctctgtgtgttctt 113  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  ||||||||||||| ||||||||||||  |    
T  119 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactaacccacattgggggaaccactataaattctctgtgtgttgat 20  T
Q  114 tctctcttccctatactct 132  Q
    |||||||||||||||||||    
T  19 tctctcttccctatactct 1  T

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Target: scaffold0277 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 18642 - 18458
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggg-agtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| ||| |||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  18642 gagaggttatctcaagcatcttagtggaaactctcacaggattgtggggagtggactagcccacattgggtgaaccactataactctttgtgtgttcttt 18543  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |  || ||  ||||||| |||| |||||||||||||||||||||| | ||  | ||||||||||||||  |||||| |||||||||    
T  18542 ccttcctctttatactcttttatttacagtatacacaacacacacctacacttatactttattaaaca-attttgtttatgaactt 18458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 8211 - 8385
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||  |||||| |||||||||||  ||||||||| |||||||||||||||||||||| ||||||||||||||||||| | ||||  ||    
T  8211 gagaggttatctcaaacatcataatggaaactctcataagattgtgaggagtggactaacccacattgggtgaaccactataaatctctatttgttgatt 8310  T
Q  115 ctctcttccctatactctttaattacagtatacac-aacacacacttgcatatttactttattaaacagtttttg 188  Q
    ||||||||||||||||||||| |||| | | |||| |||||||||    | ||||||||| |||||| |||||||    
T  8311 ctctcttccctatactctttacttactgcaaacacaaacacacacaaatacatttactttgttaaactgtttttg 8385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 28050 - 27913
Alignment:
Q  20 ggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttctct 118  Q
    |||||| ||||| |||||||||||||||||  |||||||| | ||||||||||| |||| ||||| |||| |||||||||||| |||||||| |||||||    
T  28050 ggttatgtcaagcatcatagtggaaactctgacaagattgcgaggagtggactagcccaaattggatgaagcactataaatctttgtgtgttatttctct 27951  T
Q  119 cttccctatactctttaattacagtatacacaacacac 156  Q
    ||||| |||||||||||||| |||||||||| ||||||    
T  27950 cttccttatactctttaatttcagtatacactacacac 27913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0811 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0811
Description:

Target: scaffold0811; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 2584 - 2471
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||  ||||||||||||||||| |||||||||||     
T  2584 gagaggttatctcaagcatcatagtggaaactctcacaagattgtgaggagtggactagcccacattgaatgaaccactataaatctttgtgtgttcttc 2485  T
Q  115 ctctcttccctata 128  Q
     |||||||| ||||    
T  2484 ttctcttccttata 2471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 6287 - 6145
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||| || ||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  6287 gagaggttatctcaagcattatagtggaaactctcacaagattgtgaggagtggactagcccacattggatgaaccactataactctttgtgtgttcttt 6188  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacac 158  Q
      |||||||||  |||| ||||||| |||||||||| | ||||||    
T  6187 --ctcttcccttcactcttttaatttcagtatacactatacacac 6145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0313
Description:

Target: scaffold0313; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 6559 - 6697
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||| ||||||||||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||||      
T  6559 gagaagttatctcaagcatcatagtggaaaatctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttatgtgtgttct-- 6656  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
       ||||| || |||| |||| |||||||| |||||||||||||    
T  6657 ---tcttctctttactatttacttacagtaaacacaacacacac 6697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 10341 - 10479
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||| ||||||||||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||||| | ||||||||||      
T  10341 gagaagttatctcaagcatcatagtggaaaatctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaatttatgtgtgttct-- 10438  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
       ||||| || |||| |||| |||||||| |||||||||||||    
T  10439 ---tcttctctttactatttacttacagtaaacacaacacacac 10479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 20716 - 20761
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg 61  Q
    |||| ||||||||||| ||||||||||||| |||| ||||||||||    
T  20716 gagaagttatctcaagcatcatagtggaaaatctcacaagattgtg 20761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 23 - 160
Target Start/End: Complemental strand, 196662 - 196525
Alignment:
Q  23 tatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttctctctt 121  Q
    |||||||| || ||||||| |||||||| |||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||| ||| ||||||    
T  196662 tatctcaaataccatagtgtaaactctcacaagattgtgaggagtggactaacccacattgggtgaaccactataaa-ctctgtgtgttatttttctctt 196564  T
Q  122 ccctatactctttaattacagtatacacaacacacactt 160  Q
    || ||||||||||| ||  | ||||||  ||||||||||    
T  196563 ccttatactctttatttcaactatacattacacacactt 196525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 190015 - 189943
Alignment:
Q  62 ggagtggactaacccacattggctgaaccactataaa-tctctgtgtgttctttctctcttccctatactctt 133  Q
    |||||||||||||||| ||||| |||||||||||||| |||||||||||| ||| |||||||  |||||||||    
T  190015 ggagtggactaacccatattgggtgaaccactataaattctctgtgtgttatttttctcttctttatactctt 189943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 12076 - 12218
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||||||||||||||||||| || |||||||| | |||||||||||||||||||||| || |||||||||| | | || ||||||||     
T  12076 gagaggttatctcaagtatcatagtggaaactttcacaagattgggaggagtggactaacccacattgggtgtaccactataactttttgcgtgttctt- 12174  T
Q  115 ctctcttccctatactc-tttaattacagtatacacaacacacac 158  Q
     |||||| ||| ||||| ||||||||||||| |||| | ||||||    
T  12175 -tctctttcctttactcttttaattacagtaaacactatacacac 12218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 39847 - 39704
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtggga-gtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||| ||||||||||| ||||| |||||||  ||| |||||||||| || | ||||||||||||||||| ||||||||||||| | |||| |||||||||    
T  39847 gagaagttatctcaagcatcatcgtggaaaaactcacaagattgtgagaaggggactaacccacattgggtgaaccactataagtttctgcgtgttcttt 39748  T
Q  115 ctctcttccctatactctttaattacagtatacacaacacacac 158  Q
     ||||||| || ||||||||| || |||||  ||||| ||||||    
T  39747 ttctcttctctttactctttattttcagtaatcacaaaacacac 39704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 85 - 199
Target Start/End: Complemental strand, 15139 - 15025
Alignment:
Q  85 tgaaccactataaatctctgtgtgttctttctctcttccctatactctttaatt-acagtatacacaacacacacttgcatatttactttattaaacagt 183  Q
    ||||||||||||| ||| |||||||||||||  ||||| ||||||||||| ||| |||||||||||||||||||||| ||  | ||||||||||||||      
T  15139 tgaaccactataactctttgtgtgttctttccttcttctctatactcttttatttacagtatacacaacacacacttacacttatactttattaaaca-a 15041  T
Q  184 ttttgtgtatgaactt 199  Q
    |||||| |||||||||    
T  15040 ttttgtttatgaactt 15025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 55123 - 55041
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataa 97  Q
    |||||||||||||||| | |||||||||||||||| |||||||||| ||||||||||| ||||| |||| |||||||||||||    
T  55123 gagaggttatctcaagcaccatagtggaaactctcacaagattgtgaggagtggactagcccacgttgggtgaaccactataa 55041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 48; Significance: 1e-18; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 55431 - 55562
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||  |||||||||||||||||| ||   ||||| |||||||||||||||||||||  ||||||| ||||| | | ||| |||||||     
T  55431 gagaggttatctcaaacatcatagtggaaactctcaca---ttgtgaggagtggactaacccacattgaatgaaccaatataattatttgtatgttctt- 55526  T
Q  115 ctctcttccctatactc-tttaattacagtatacaca 150  Q
     |||||||||| ||||| |||||||||| ||||||||    
T  55527 -tctcttccctttactcttttaattacaatatacaca 55562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 59380 - 59511
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||  |||||||||||||||||| ||   ||||| |||||||||||||||||||||  ||||||| ||||| | | ||| |||||||     
T  59380 gagaggttatctcaaacatcatagtggaaactctcaca---ttgtgaggagtggactaacccacattgaatgaaccaatataattatttgtatgttctt- 59475  T
Q  115 ctctcttccctatactc-tttaattacagtatacaca 150  Q
     |||||||||| ||||| |||||||||| ||||||||    
T  59476 -tctcttccctttactcttttaattacaatatacaca 59511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 60808 - 60939
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||||||||||||  |||||||||||||||||| ||   ||||| |||||||||||||||||||||  ||||||| ||||| | | ||| |||||||     
T  60808 gagaggttatctcaaacatcatagtggaaactctcaca---ttgtgaggagtggactaacccacattgaatgaaccaatataattatttgtatgttctt- 60903  T
Q  115 ctctcttccctatactc-tttaattacagtatacaca 150  Q
     |||||||||| ||||| |||||||||| ||||||||    
T  60904 -tctcttccctttactcttttaattacaatatacaca 60939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 113 - 188
Target Start/End: Original strand, 9 - 84
Alignment:
Q  113 ttctctcttccctatactctttaattacagtatacacaacacacacttgcatatttactttattaaacagtttttg 188  Q
    ||||||||||||||||||||||| |||| | |||||||||||||||   || |||||||||||||||| |||||||    
T  9 ttctctcttccctatactctttacttactgcatacacaacacacacaaacacatttactttattaaactgtttttg 84  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 67013 - 67118
Alignment:
Q  21 gttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttctttctctc 119  Q
    ||||||| ||| ||||||||| ||| |||| |||||||||| |||||| ||||||||||||||  |||||||||||| || | || ||||||||  ||||    
T  67013 gttatctgaagcatcatagtgaaaattctcacaagattgtgaggagtgtactaacccacattgagtgaaccactatatatttatgcgtgttcttcttctc 67112  T
Q  120 ttccct 125  Q
    ||||||    
T  67113 ttccct 67118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 157
Target Start/End: Original strand, 1058 - 1201
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg-ggagtggactaacccacattggctgaaccactataaatctctgtgtgttcttt 114  Q
    |||||| ||||||||| ||||||||||||| |||| |||||||||| ||| |||| || || || |||  ||||||||||||||| ||||||| ||||||    
T  1058 gagagggtatctcaagcatcatagtggaaattctcacaagattgtgaggaatggattagcctacgttgagtgaaccactataaatttctgtgt-ttcttt 1156  T
Q  115 ctctcttccctatactctttaattacag---tatacacaacacaca 157  Q
    ||   |||| |||||| |||| ||||||   |||||||||||||||    
T  1157 cttctttccttatact-tttacttacagtactatacacaacacaca 1201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0873 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0873
Description:

Target: scaffold0873; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 199
Target Start/End: Complemental strand, 4943 - 4892
Alignment:
Q  148 acaacacacacttgcatatttactttattaaacagtttttgtgtatgaactt 199  Q
    |||||||||||||||| ||| |||||||||||| |||| |||||||||||||    
T  4943 acaacacacacttgcacattgactttattaaactgtttctgtgtatgaactt 4892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0764 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0764
Description:

Target: scaffold0764; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 50 - 5
Alignment:
Q  16 gagaggttatctcaagtatcatagtggaaactctctcaagattgtg 61  Q
    |||| ||||||||||| ||||||||||||| |||| ||||||||||    
T  50 gagaagttatctcaagcatcatagtggaaaatctcacaagattgtg 5  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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