View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15208_low_6 (Length: 353)
Name: NF15208_low_6
Description: NF15208
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15208_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 17 - 338
Target Start/End: Original strand, 7632053 - 7632370
Alignment:
| Q |
17 |
tttcataacaataaatttgcaaactgataatttcgccattttcatctcagattgaagaaagaagtcaaagatataatatatgtacaagattgtggggaga |
116 |
Q |
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|||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7632053 |
tttcataacaatgaatttgcaaactgataatttcgtcattttcatctcagattgaagaaagaagtcaaagatataatatatgtacaagattgtggggaga |
7632152 |
T |
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| Q |
117 |
gtatgaagtggagcttaaatttttcaaaatgaagttcattgtgatatctttgttttgttaacggtgctacccgttaattttttcatgtgattgtgtctac |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7632153 |
gtatgaagtggagcttaaatttttcaaaatgaagttcattgtgatatctttgttttgttaacggtgctacccgttaattttttcatgtgattgtgtctac |
7632252 |
T |
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| Q |
217 |
aaatgtggaacaactcatgttatggaaaatcacatgatggannnnnnnnngatttgtactagcttggctagaatttctttacacacatttctcatcnnnn |
316 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7632253 |
aaatgtggaacaactcatgttatggaaaatcacatgatgga----tttttgatttgtactagcttggctagaatttctttacacacatttctcatctttt |
7632348 |
T |
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| Q |
317 |
nnnnactccactttgtagttac |
338 |
Q |
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|||||||||||||||||| |
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| T |
7632349 |
ttttactccactttgtagttac |
7632370 |
T |
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