View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15209_low_5 (Length: 254)
Name: NF15209_low_5
Description: NF15209
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15209_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 48957379 - 48957622
Alignment:
| Q |
1 |
taaggcacaaatagcacataaatgaacttgttagttggttagcaaagcaatccatgttacttaaaactcccaaccttccctttactactttgatgcctta |
100 |
Q |
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| T |
48957379 |
taaggcacaaatagcacatagatgaacttgttagtgggttagcaaagcaatccatgttacttaaaactcccagccttcactttactactttgatgcctta |
48957478 |
T |
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| Q |
101 |
aacctgagaaaaagttcttctccatatccataacttgactaaataagtgggttagcaaagcaacccattcagaaaggtggtgataatcaattcgaaagct |
200 |
Q |
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||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |
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| T |
48957479 |
aacctgagaaaaagttcttcttcatatccataacttgactaaataagtgggttagcaaagcaacccattcagaaaagtggtgataatcaattcgaaagtt |
48957578 |
T |
|
| Q |
201 |
tcaagc----catgtgcacggaagtatcaaaacctttctctgtg |
240 |
Q |
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|||||| |||||||||||||||||||||||||||||||||| |
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| T |
48957579 |
tcaagccatgcatgtgcacggaagtatcaaaacctttctctgtg |
48957622 |
T |
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