View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1520_high_25 (Length: 235)

Name: NF1520_high_25
Description: NF1520
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1520_high_25
NF1520_high_25
[»] chr3 (38 HSPs)
chr3 (3-235)||(39756246-39756478)
chr3 (185-235)||(1509549-1509599)
chr3 (182-235)||(49651782-49651835)
chr3 (186-235)||(55401085-55401134)
chr3 (184-235)||(21256984-21257035)
chr3 (184-235)||(28918011-28918062)
chr3 (182-235)||(14832109-14832162)
chr3 (186-234)||(8587021-8587069)
chr3 (187-235)||(10268487-10268535)
chr3 (186-228)||(8593154-8593196)
chr3 (189-235)||(26508120-26508166)
chr3 (181-235)||(34185118-34185172)
chr3 (185-235)||(34910327-34910377)
chr3 (182-235)||(4987287-4987340)
chr3 (186-235)||(10954962-10955011)
chr3 (182-235)||(14209123-14209176)
chr3 (182-235)||(25948883-25948936)
chr3 (182-235)||(27505256-27505309)
chr3 (186-235)||(51206353-51206402)
chr3 (183-235)||(15796291-15796343)
chr3 (183-235)||(28812525-28812577)
chr3 (183-234)||(15314873-15314924)
chr3 (188-235)||(20503475-20503522)
chr3 (188-235)||(55212973-55213020)
chr3 (187-229)||(3865690-3865732)
chr3 (182-235)||(14747571-14747625)
chr3 (182-228)||(17276742-17276788)
chr3 (186-235)||(25775518-25775568)
chr3 (182-235)||(750614-750667)
chr3 (186-235)||(7928460-7928509)
chr3 (186-235)||(10335286-10335335)
chr3 (182-235)||(14829700-14829752)
chr3 (194-235)||(17568691-17568732)
chr3 (186-235)||(21479128-21479177)
chr3 (182-235)||(41961646-41961699)
chr3 (183-235)||(11665954-11666006)
chr3 (183-235)||(28678313-28678365)
chr3 (13-45)||(39745783-39745815)
[»] chr1 (45 HSPs)
chr1 (173-235)||(24577173-24577235)
chr1 (186-235)||(22515887-22515936)
chr1 (186-235)||(22881616-22881665)
chr1 (186-235)||(38078661-38078710)
chr1 (188-235)||(32461465-32461512)
chr1 (182-235)||(113309-113362)
chr1 (182-235)||(1486705-1486758)
chr1 (182-235)||(1704988-1705041)
chr1 (186-235)||(5927340-5927389)
chr1 (182-235)||(6612167-6612220)
chr1 (186-235)||(18337339-18337388)
chr1 (182-227)||(26526752-26526797)
chr1 (182-227)||(31694706-31694751)
chr1 (186-235)||(46348383-46348432)
chr1 (182-235)||(47989507-47989560)
chr1 (187-235)||(40258934-40258982)
chr1 (184-235)||(18556454-18556505)
chr1 (183-233)||(25272494-25272544)
chr1 (186-235)||(9103650-9103698)
chr1 (186-235)||(41877470-41877519)
chr1 (186-235)||(42359449-42359498)
chr1 (180-220)||(2218264-2218304)
chr1 (179-235)||(2283676-2283732)
chr1 (183-235)||(16164312-16164364)
chr1 (191-235)||(48450592-48450636)
chr1 (185-227)||(28663626-28663668)
chr1 (186-235)||(51410034-51410084)
chr1 (187-232)||(1815270-1815315)
chr1 (201-234)||(5454138-5454171)
chr1 (182-227)||(5944301-5944346)
chr1 (182-235)||(6427360-6427413)
chr1 (178-235)||(9828054-9828111)
chr1 (185-226)||(15449231-15449272)
chr1 (190-227)||(18471318-18471355)
chr1 (186-235)||(21530699-21530748)
chr1 (187-232)||(28273089-28273134)
chr1 (186-235)||(31672895-31672944)
chr1 (182-235)||(44482240-44482293)
chr1 (183-235)||(6332681-6332732)
chr1 (183-227)||(6427482-6427526)
chr1 (183-235)||(15323173-15323225)
chr1 (187-235)||(18190109-18190157)
chr1 (183-227)||(21032224-21032268)
chr1 (179-227)||(30173755-30173803)
chr1 (191-235)||(31015053-31015097)
[»] chr8 (25 HSPs)
chr8 (182-235)||(22651986-22652039)
chr8 (182-235)||(2572052-2572105)
chr8 (187-235)||(4298887-4298935)
chr8 (185-235)||(8342982-8343032)
chr8 (186-235)||(20873079-20873128)
chr8 (183-235)||(15816126-15816178)
chr8 (183-235)||(25566851-25566903)
chr8 (185-235)||(8343326-8343376)
chr8 (186-235)||(4948662-4948711)
chr8 (182-235)||(29510300-29510353)
chr8 (182-235)||(13436960-13437013)
chr8 (182-235)||(21465422-21465475)
chr8 (182-235)||(29447106-29447159)
chr8 (187-235)||(22197743-22197791)
chr8 (186-233)||(18170482-18170529)
chr8 (186-233)||(18634050-18634097)
chr8 (188-231)||(26434194-26434237)
chr8 (188-235)||(40332201-40332248)
chr8 (186-235)||(5813602-5813651)
chr8 (186-235)||(24613531-24613579)
chr8 (182-235)||(25172694-25172747)
chr8 (182-235)||(28745508-28745561)
chr8 (186-235)||(30077387-30077436)
chr8 (186-235)||(36450754-36450803)
chr8 (183-235)||(11927083-11927135)
[»] chr7 (39 HSPs)
chr7 (182-235)||(9778510-9778563)
chr7 (187-235)||(11061077-11061125)
chr7 (185-235)||(3991334-3991384)
chr7 (185-235)||(9408333-9408383)
chr7 (182-235)||(7438716-7438769)
chr7 (182-235)||(24339652-24339705)
chr7 (182-227)||(2334268-2334313)
chr7 (182-235)||(5409832-5409885)
chr7 (182-235)||(6028635-6028688)
chr7 (182-235)||(26033457-26033510)
chr7 (173-235)||(18039008-18039071)
chr7 (180-235)||(18215180-18215235)
chr7 (186-235)||(3721103-3721152)
chr7 (191-232)||(14077439-14077480)
chr7 (191-232)||(14387467-14387508)
chr7 (186-235)||(25481912-25481961)
chr7 (182-235)||(27945051-27945104)
chr7 (182-235)||(43027465-43027518)
chr7 (183-231)||(1885587-1885635)
chr7 (182-235)||(11272582-11272637)
chr7 (187-235)||(38143233-38143281)
chr7 (187-231)||(48438560-48438604)
chr7 (185-235)||(4024037-4024087)
chr7 (185-227)||(21560521-21560563)
chr7 (182-235)||(32094016-32094070)
chr7 (185-235)||(35861974-35862024)
chr7 (182-235)||(7058436-7058489)
chr7 (186-235)||(7197297-7197346)
chr7 (182-235)||(7328687-7328740)
chr7 (182-235)||(11665436-11665489)
chr7 (182-235)||(13770701-13770754)
chr7 (186-227)||(15680827-15680868)
chr7 (182-235)||(15902832-15902885)
chr7 (186-235)||(21880162-21880211)
chr7 (183-224)||(43243098-43243139)
chr7 (187-235)||(19206060-19206108)
chr7 (187-235)||(24146826-24146874)
chr7 (183-235)||(35297669-35297721)
chr7 (187-235)||(42720891-42720939)
[»] chr6 (40 HSPs)
chr6 (186-235)||(426514-426563)
chr6 (182-235)||(10770670-10770723)
chr6 (182-235)||(16766707-16766760)
chr6 (186-235)||(403864-403913)
chr6 (182-235)||(7930315-7930368)
chr6 (182-235)||(9107366-9107419)
chr6 (186-235)||(17841589-17841638)
chr6 (186-235)||(34595144-34595193)
chr6 (183-235)||(31384930-31384982)
chr6 (186-235)||(4877952-4878002)
chr6 (186-235)||(853859-853908)
chr6 (194-235)||(4118341-4118382)
chr6 (182-235)||(5970104-5970157)
chr6 (186-235)||(7801156-7801205)
chr6 (186-235)||(7977830-7977879)
chr6 (182-235)||(8365515-8365568)
chr6 (182-235)||(9522901-9522954)
chr6 (182-235)||(12696334-12696387)
chr6 (182-235)||(21395304-21395356)
chr6 (186-235)||(28715305-28715354)
chr6 (186-235)||(33001289-33001338)
chr6 (187-235)||(7938126-7938174)
chr6 (187-235)||(15489733-15489781)
chr6 (180-235)||(9025488-9025543)
chr6 (188-235)||(16833318-16833365)
chr6 (186-235)||(3209391-3209441)
chr6 (185-235)||(9617444-9617494)
chr6 (182-224)||(9911524-9911566)
chr6 (182-235)||(17302566-17302620)
chr6 (182-235)||(2117086-2117138)
chr6 (186-235)||(4864073-4864122)
chr6 (186-235)||(6898281-6898330)
chr6 (182-235)||(7086805-7086858)
chr6 (186-235)||(8776973-8777022)
chr6 (186-235)||(9629393-9629442)
chr6 (182-231)||(19369831-19369880)
chr6 (187-235)||(24645490-24645539)
chr6 (186-235)||(28152109-28152157)
chr6 (183-235)||(9195751-9195803)
chr6 (191-235)||(31959169-31959213)
[»] chr5 (30 HSPs)
chr5 (182-235)||(5894829-5894882)
chr5 (182-235)||(31084333-31084386)
chr5 (181-235)||(13287394-13287448)
chr5 (186-235)||(6247632-6247681)
chr5 (186-235)||(8420037-8420086)
chr5 (182-235)||(19579711-19579764)
chr5 (186-235)||(21191056-21191105)
chr5 (186-235)||(33178035-33178084)
chr5 (182-235)||(39698551-39698604)
chr5 (191-235)||(14674279-14674323)
chr5 (185-235)||(10298579-10298629)
chr5 (182-235)||(7677715-7677768)
chr5 (186-235)||(21576745-21576794)
chr5 (182-235)||(22423808-22423861)
chr5 (186-235)||(43564891-43564940)
chr5 (183-227)||(12199948-12199992)
chr5 (183-235)||(12641684-12641736)
chr5 (187-235)||(42893370-42893418)
chr5 (193-235)||(15405062-15405104)
chr5 (190-235)||(12159962-12160007)
chr5 (186-227)||(15382497-15382538)
chr5 (186-227)||(15884006-15884047)
chr5 (182-235)||(21351901-21351954)
chr5 (182-235)||(21522760-21522813)
chr5 (182-235)||(21533326-21533379)
chr5 (182-235)||(21542040-21542093)
chr5 (190-235)||(24906305-24906350)
chr5 (182-235)||(37328840-37328893)
chr5 (183-235)||(30183559-30183611)
chr5 (183-235)||(36838553-36838605)
[»] chr4 (35 HSPs)
chr4 (182-235)||(12895112-12895165)
chr4 (186-235)||(23292986-23293035)
chr4 (188-235)||(6485613-6485660)
chr4 (182-235)||(11596348-11596401)
chr4 (188-235)||(29205454-29205501)
chr4 (186-235)||(2361975-2362024)
chr4 (182-235)||(3947762-3947815)
chr4 (186-235)||(12895274-12895323)
chr4 (186-235)||(21945513-21945562)
chr4 (182-235)||(24613697-24613750)
chr4 (182-227)||(28084540-28084585)
chr4 (186-235)||(28964248-28964297)
chr4 (186-235)||(54580023-54580072)
chr4 (187-235)||(847961-848009)
chr4 (183-231)||(16303263-16303311)
chr4 (183-235)||(27706174-27706226)
chr4 (187-235)||(35157986-35158034)
chr4 (185-235)||(31800477-31800527)
chr4 (199-235)||(888207-888244)
chr4 (186-235)||(4157160-4157208)
chr4 (186-231)||(6879465-6879510)
chr4 (182-227)||(11797624-11797669)
chr4 (186-235)||(12797338-12797386)
chr4 (182-235)||(19482678-19482731)
chr4 (190-235)||(21658818-21658863)
chr4 (194-235)||(37203274-37203315)
chr4 (186-227)||(42640547-42640588)
chr4 (182-235)||(44081573-44081626)
chr4 (182-235)||(51701268-51701321)
chr4 (186-226)||(4157455-4157495)
chr4 (187-235)||(7214523-7214571)
chr4 (199-235)||(14465088-14465124)
chr4 (184-235)||(30298956-30299008)
chr4 (184-235)||(30327824-30327876)
chr4 (187-235)||(33950146-33950194)
[»] scaffold0011 (1 HSPs)
scaffold0011 (187-235)||(17750-17798)
[»] chr2 (26 HSPs)
chr2 (184-235)||(20539672-20539723)
chr2 (186-235)||(18255980-18256029)
chr2 (182-235)||(30717526-30717579)
chr2 (186-235)||(37558987-37559036)
chr2 (186-232)||(38442320-38442366)
chr2 (186-235)||(2438719-2438768)
chr2 (186-227)||(5040752-5040793)
chr2 (182-235)||(12668419-12668472)
chr2 (186-235)||(30335427-30335476)
chr2 (186-235)||(30404850-30404899)
chr2 (182-235)||(37419753-37419806)
chr2 (183-235)||(974757-974809)
chr2 (183-235)||(15657874-15657926)
chr2 (187-235)||(18841014-18841062)
chr2 (182-235)||(14996219-14996273)
chr2 (181-235)||(18420429-18420483)
chr2 (186-235)||(19536397-19536447)
chr2 (182-235)||(23058438-23058492)
chr2 (182-232)||(33153437-33153487)
chr2 (182-235)||(13204035-13204088)
chr2 (201-234)||(15349851-15349884)
chr2 (186-235)||(15972883-15972932)
chr2 (186-235)||(18421973-18422022)
chr2 (182-235)||(34337177-34337225)
chr2 (187-231)||(11223864-11223908)
chr2 (183-235)||(36756341-36756393)
[»] scaffold0722 (1 HSPs)
scaffold0722 (186-235)||(7032-7081)
[»] scaffold0223 (1 HSPs)
scaffold0223 (182-235)||(20182-20235)
[»] scaffold0652 (1 HSPs)
scaffold0652 (186-235)||(462-511)
[»] scaffold0450 (1 HSPs)
scaffold0450 (182-235)||(8631-8684)
[»] scaffold0053 (1 HSPs)
scaffold0053 (186-235)||(8808-8857)
[»] scaffold0027 (1 HSPs)
scaffold0027 (186-235)||(46692-46741)
[»] scaffold0025 (1 HSPs)
scaffold0025 (183-235)||(23779-23832)
[»] scaffold0236 (1 HSPs)
scaffold0236 (183-235)||(25765-25817)
[»] scaffold0136 (1 HSPs)
scaffold0136 (183-235)||(3846-3898)
[»] scaffold0003 (1 HSPs)
scaffold0003 (183-235)||(241604-241656)
[»] scaffold0021 (1 HSPs)
scaffold0021 (189-231)||(130496-130538)
[»] scaffold0697 (1 HSPs)
scaffold0697 (186-235)||(1654-1703)
[»] scaffold0171 (1 HSPs)
scaffold0171 (182-227)||(23438-23483)
[»] scaffold0103 (1 HSPs)
scaffold0103 (194-235)||(51821-51862)
[»] scaffold0086 (1 HSPs)
scaffold0086 (182-227)||(2946-2991)
[»] scaffold0050 (1 HSPs)
scaffold0050 (186-235)||(70288-70337)
[»] scaffold0044 (1 HSPs)
scaffold0044 (182-235)||(53190-53243)
[»] scaffold0361 (1 HSPs)
scaffold0361 (195-235)||(14540-14580)


Alignment Details
Target: chr3 (Bit Score: 221; Significance: 1e-122; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 39756478 - 39756246
Alignment:
Q  3 gtgcttggtcgaattgatatcacaattatctttgcaaatgatattaccacctgccaattaagacaatcaaaaaatttaatgagtacatcatatttgataa 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39756478 gtgcttggtcgaattgatatcacaattatctttgcaaatgatattaccacctgccaattaagacaatcaaaaaatttaatgagtacatcatatttgataa 39756379  T
Q  103 tatatgttccataattaattatgctatgatttaatttctttggccaaaatgtatttagagtgtttctctttgaagcacggacacgacaccgacacttgta 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  39756378 tatatgttccataattaattatgctatgatttaatttctttggccaaaatgtatttagagtgtttctctatggagcacggacacgacaccgacacttgta 39756279  T
Q  203 attatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||||||| |||||||    
T  39756278 attatattaaattatgtgatttttttaaattat 39756246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 1509599 - 1509549
Alignment:
Q  185 acgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  1509599 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 1509549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 49651782 - 49651835
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||||||| | | ||||||||||||||||||||||||    
T  49651782 gacacgacaccgacacttgtaattacagtgaattatgtgattttttcaaattat 49651835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 55401134 - 55401085
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  55401134 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 55401085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 21256984 - 21257035
Alignment:
Q  184 cacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||| ||||||||||||||||||| | ||||||||||||||||||||||||    
T  21256984 cacgataccgacacttgtaattatactgaattatgtgattttttcaaattat 21257035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 28918062 - 28918011
Alignment:
Q  184 cacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||||| | | ||||||||||||||||||||||||    
T  28918062 cacgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 28918011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 14832162 - 14832109
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||| |||||||||||||| ||| | ||||||||||||||||||||||    
T  14832162 gacacgacactgacacttgtaattacattgagttatgtgattttttcaaattat 14832109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 8587021 - 8587069
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaatta 234  Q
    ||||||||||||||||||||| | | |||||||||||||||||||||||    
T  8587021 cgacaccgacacttgtaattacacttaattatgtgattttttcaaatta 8587069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 10268487 - 10268535
Alignment:
Q  187 gacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||| |||||||||||||| | ||||||||||||||||||||||||||    
T  10268487 gacactgacacttgtaattacactaaattatgtgattttttcaaattat 10268535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 8593196 - 8593154
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttc 228  Q
    ||||||||||||||||||||||| | |||||||||||||||||    
T  8593196 cgacaccgacacttgtaattatactgaattatgtgattttttc 8593154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 26508166 - 26508120
Alignment:
Q  189 caccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||| | | ||||||||||||||||||||||||    
T  26508166 caccgacacttgtaattacactgaattatgtgattttttcaaattat 26508120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 34185118 - 34185172
Alignment:
Q  181 ggacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||||||||||| | | |||| ||||||||||| |||||||    
T  34185118 ggacacgacaccgacacttgtaattacactgaattgtgtgattttttgaaattat 34185172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 34910377 - 34910327
Alignment:
Q  185 acgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||| |||||||||| | | ||||||||||||||||||||||||    
T  34910377 acgacaccgactcttgtaattacactgaattatgtgattttttcaaattat 34910327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 4987287 - 4987340
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||| |||| ||||||||||||| | | ||||||||||||||||||||||||    
T  4987287 gacacgtcaccaacacttgtaattacactgaattatgtgattttttcaaattat 4987340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 10955011 - 10954962
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||| |||| | | ||||||||||||||||||||||||    
T  10955011 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattat 10954962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 14209176 - 14209123
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||| |||||||||||||| | | |||||||||||||||| |||||||    
T  14209176 gacacgacactgacacttgtaattacactgaattatgtgattttttaaaattat 14209123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 25948883 - 25948936
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||| |||||| |||||| | | ||||||||||||||||||||||||    
T  25948883 gacacgacaccaacacttataattacactgaattatgtgattttttcaaattat 25948936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 27505309 - 27505256
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||||||| | | |||||||||||||||  |||||||    
T  27505309 gacacgacaccgacacttgtaattacacttaattatgtgatttttaaaaattat 27505256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 51206353 - 51206402
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||| ||| | | ||||||||||||||||||||||||    
T  51206353 cgacaccgacacttgtatttacactgaattatgtgattttttcaaattat 51206402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 15796291 - 15796343
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||| ||||||||| | | |||||| |||||||||||||||||    
T  15796291 acacgacaccgacaattgtaattacactgaattatatgattttttcaaattat 15796343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 28812577 - 28812525
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| || | | ||||||||||||| ||||||||||    
T  28812577 acacgacaccgacacttgtaactacactgaattatgtgatttcttcaaattat 28812525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 15314873 - 15314924
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgattttttcaaatta 234  Q
    |||||||||| |||| | |||||| | |||||||||||||||||||||||||    
T  15314873 acacgacaccaacacatataattacactaaattatgtgattttttcaaatta 15314924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 20503522 - 20503475
Alignment:
Q  188 acaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||| | | |||||||| |||||||||||||||    
T  20503522 acaccgacacttgtaattacactgaattatgtcattttttcaaattat 20503475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 55213020 - 55212973
Alignment:
Q  188 acaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||  | |||||||||||||||||| |||||||    
T  55213020 acaccgacacttgtaattgcactaaattatgtgattttttaaaattat 55212973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 3865732 - 3865690
Alignment:
Q  187 gacaccgacacttgtaattatattaaattatgtgattttttca 229  Q
    |||||||||||||||||||||| | |||||||||| |||||||    
T  3865732 gacaccgacacttgtaattatactgaattatgtgagtttttca 3865690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 14747625 - 14747571
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgatt-ttttcaaattat 235  Q
    |||||||||| ||| |||||||||| | |||||||||||||| ||||||||||||    
T  14747625 gacacgacacggacccttgtaattacactaaattatgtgatttttttcaaattat 14747571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 17276788 - 17276742
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttc 228  Q
    |||||||||| ||||||||||||||||  |||||||||| |||||||    
T  17276788 gacacgacactgacacttgtaattataccaaattatgtgtttttttc 17276742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 25775568 - 25775518
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgatt-ttttcaaattat 235  Q
    ||||||||||||||||||||| | | |||||||||||| ||||||||||||    
T  25775568 cgacaccgacacttgtaattacactgaattatgtgattattttcaaattat 25775518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 750614 - 750667
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||||||  |   ||||||||||| ||||||||||||    
T  750614 gacacgacaccgacacttgtaattgcagcgaattatgtgatattttcaaattat 750667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 7928509 - 7928460
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||| | |||||| | | ||||||||||||||||||||||||    
T  7928509 cgacaccgacacatataattacactgaattatgtgattttttcaaattat 7928460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 10335286 - 10335335
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||| ||| | |||| ||||||| |||||||||||||    
T  10335286 cgacaccgacacttgtatttacactaaaatatgtgactttttcaaattat 10335335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 14829752 - 14829700
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||||||||||   | ||||||||||| ||||||||||||    
T  14829752 gacacgacaccgacacttgtaattaccatgaattatgtgat-ttttcaaattat 14829700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 17568691 - 17568732
Alignment:
Q  194 acacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||| |||||||||||| ||||| |||||||||    
T  17568691 acacttgtaattacattaaattatgtaattttctcaaattat 17568732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 21479177 - 21479128
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||| ||||||| | | |||| |||||||||||||||||||    
T  21479177 cgacaccgacactagtaattacactgaattgtgtgattttttcaaattat 21479128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 41961646 - 41961699
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||||||| |   ||| ||||||| ||||||||||||    
T  41961646 gacacgacaccgacacttgtaattacaccgaataatgtgatattttcaaattat 41961699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 11666006 - 11665954
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||| | |||||| | |||||| ||||||||| |||||||||    
T  11666006 acacgacaccgacacatataattacactaaattgtgtgattttatcaaattat 11665954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 28678365 - 28678313
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||| |  ||||||| |||||||||||||||| | |||||||    
T  28678365 acacgacaccgacacatacaattatactaaattatgtgattttattaaattat 28678313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 39745815 - 39745783
Alignment:
Q  13 gaattgatatcacaattatctttgcaaatgata 45  Q
    ||||||| |||||||||||||||||||||||||    
T  39745815 gaattgaaatcacaattatctttgcaaatgata 39745783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 2e-20; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 173 - 235
Target Start/End: Original strand, 24577173 - 24577235
Alignment:
Q  173 tgaagcacggacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||    
T  24577173 tgaagcacggacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 24577235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 22515887 - 22515936
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  22515887 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 22515936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 22881616 - 22881665
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  22881616 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 22881665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 38078661 - 38078710
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  38078661 cgacaccgacacttgtaattacattgaattatgtgattttttcaaattat 38078710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 32461465 - 32461512
Alignment:
Q  188 acaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  32461465 acaccaacacttgtaattacattaaattatgtgattttttcaaattat 32461512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 113362 - 113309
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||| ||||||||||||| | | ||||||||||||||||||||||||    
T  113362 gacacgacacctacacttgtaattacactgaattatgtgattttttcaaattat 113309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 1486705 - 1486758
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||| |||||| | | ||||||||||||||||||||||||    
T  1486705 gacacgacaccgacacttataattacactgaattatgtgattttttcaaattat 1486758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 1704988 - 1705041
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||||||||||   | ||||||||||||||||||||||||    
T  1704988 gacacgacaccgacacttgtaattaccctgaattatgtgattttttcaaattat 1705041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 5927340 - 5927389
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||| |||||||||||||| |||||||||| |||||||||||||||||    
T  5927340 cgacactgacacttgtaattacattaaattatatgattttttcaaattat 5927389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 6612167 - 6612220
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||||||| | | |||||||| |||||||||||||||    
T  6612167 gacacgacaccgacacttgtaattacactgaattatgtaattttttcaaattat 6612220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 18337388 - 18337339
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| | | ||||||||||||||||||||||||    
T  18337388 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 18337339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 26526752 - 26526797
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgatttttt 227  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||    
T  26526752 gacacaacaccgacacttgtaattatattaaattatgtgttttttt 26526797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 31694706 - 31694751
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgatttttt 227  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||    
T  31694706 gacacgacaccgacacttgtaattatactgaattatgtgatttttt 31694751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 46348383 - 46348432
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| | |||||||| |||||||||||||||||    
T  46348383 cgacaccgacacttgtaattacactaaattatatgattttttcaaattat 46348432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 47989560 - 47989507
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||||||| | | |||||||||||||||| |||||||    
T  47989560 gacacgacaccgacacttgtaattacactgaattatgtgatttttttaaattat 47989507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 40258934 - 40258982
Alignment:
Q  187 gacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||||| | | ||||||||||||||||||||||||    
T  40258934 gacaccgacacttgtaattacactgaattatgtgattttttcaaattat 40258982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 18556454 - 18556505
Alignment:
Q  184 cacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||| | ||||||||||| ||||||||||||||| ||||||||||||    
T  18556454 cacgacaccaatacttgtaattacattaaattatgtgatattttcaaattat 18556505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 25272544 - 25272494
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgattttttcaaatt 233  Q
    ||||||||||||||||| |||||| | |||||||||||||||| |||||||    
T  25272544 acacgacaccgacacttataattacactaaattatgtgattttctcaaatt 25272494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 9103698 - 9103650
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||| ||| | ||||||||||||||||||||||||||    
T  9103698 cgacaccgacacttgta-ttaaactaaattatgtgattttttcaaattat 9103650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 41877470 - 41877519
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| | |||||||||| ||||| |||||||||    
T  41877470 cgacaccgacacttgtaattacactaaattatgtaattttctcaaattat 41877519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 42359449 - 42359498
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| | | |||| |||||||||||||||||||    
T  42359449 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattat 42359498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 2218304 - 2218264
Alignment:
Q  180 cggacacgacaccgacacttgtaattatattaaattatgtg 220  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  2218304 cggacacgacaccgacacttgtaattacactaaattatgtg 2218264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 2283732 - 2283676
Alignment:
Q  179 acggacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||| |||||||| |||||| |||||| ||| ||| ||||||||||||||||||||    
T  2283732 acggatacgacaccaacacttataattacattgaatcatgtgattttttcaaattat 2283676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 16164312 - 16164364
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||  ||||| | |||||| ||||||||||||||||||||||||||||    
T  16164312 acacgacaatgacacatataattacattaaattatgtgattttttcaaattat 16164364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 48450592 - 48450636
Alignment:
Q  191 ccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||| | |||||||||| |||||||||||||||    
T  48450592 ccgacacttgtaattacactaaattatgttattttttcaaattat 48450636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 227
Target Start/End: Complemental strand, 28663668 - 28663626
Alignment:
Q  185 acgacaccgacacttgtaattatattaaattatgtgatttttt 227  Q
    |||||||||||||||||||||| ||  ||||||||||||||||    
T  28663668 acgacaccgacacttgtaattacatagaattatgtgatttttt 28663626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 51410084 - 51410034
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgatt-ttttcaaattat 235  Q
    ||||||||||||||||||||| | | |||||||||||| ||||||||||||    
T  51410084 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattat 51410034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 1815315 - 1815270
Alignment:
Q  187 gacaccgacacttgtaattatattaaattatgtgattttttcaaat 232  Q
    |||||||||||||||||||| | | |||||||||||||||| ||||    
T  1815315 gacaccgacacttgtaattacactgaattatgtgattttttaaaat 1815270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 5454138 - 5454171
Alignment:
Q  201 taattatattaaattatgtgattttttcaaatta 234  Q
    |||||||||| |||||||||||||||||||||||    
T  5454138 taattatatttaattatgtgattttttcaaatta 5454171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 5944346 - 5944301
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgatttttt 227  Q
    |||||||||||||||||| |||||| | | ||||||||||||||||    
T  5944346 gacacgacaccgacacttataattacactgaattatgtgatttttt 5944301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 6427413 - 6427360
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||| |||| | |||||| ||| |||||||||||||| |||||||||    
T  6427413 gacacgacaccaacacatataattacattgaattatgtgattttctcaaattat 6427360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 9828111 - 9828054
Alignment:
Q  178 cacggacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||||| |  ||||| | | |||||||||||||| |||||||||    
T  9828111 cacggacacgacaccgacacataaaattacactgaattatgtgattttatcaaattat 9828054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 15449231 - 15449272
Alignment:
Q  185 acgacaccgacacttgtaattatattaaattatgtgattttt 226  Q
    ||||||| |||||||||||||| | |||||||||||||||||    
T  15449231 acgacacagacacttgtaattacactaaattatgtgattttt 15449272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 18471355 - 18471318
Alignment:
Q  190 accgacacttgtaattatattaaattatgtgatttttt 227  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  18471355 accgacacttgtaattatactgaattatgtgatttttt 18471318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 21530748 - 21530699
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||| ||||||||  ||||||| ||||||| |||||||||    
T  21530748 cgacaccgacacttataattataccaaattatatgattttctcaaattat 21530699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 28273089 - 28273134
Alignment:
Q  187 gacaccgacacttgtaattatattaaattatgtgattttttcaaat 232  Q
    |||||||||||||||||||| | | |||||| ||||||||||||||    
T  28273089 gacaccgacacttgtaattacactgaattatatgattttttcaaat 28273134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 31672895 - 31672944
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||| ||||||||||| | | ||||| ||||||||||||||||||    
T  31672895 cgacaccgagacttgtaattacactgaattaagtgattttttcaaattat 31672944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 44482293 - 44482240
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||| | |||||| | | |||||||||||||| |||||||||    
T  44482293 gacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 6332732 - 6332681
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||| ||||||||||| | | ||||||||||| ||||||||||||    
T  6332732 acacgacaccgatacttgtaattacactgaattatgtgat-ttttcaaattat 6332681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 6427526 - 6427482
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgatttttt 227  Q
    ||||||||| |||||||||| ||| ||| ||||||||||||||||    
T  6427526 acacgacactgacacttgtagttacattgaattatgtgatttttt 6427482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 15323225 - 15323173
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||| || |||||||  ||||| | ||||||||||||||||||||||||||    
T  15323225 acacgatacagacacttacaattacactaaattatgtgattttttcaaattat 15323173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 18190109 - 18190157
Alignment:
Q  187 gacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||| ||||||||||||||| | | |||||||| |||||||||||||||    
T  18190109 gacatcgacacttgtaattacactgaattatgtaattttttcaaattat 18190157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 21032268 - 21032224
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgatttttt 227  Q
    |||||||||||||| ||||||||||||| ||||| || |||||||    
T  21032268 acacgacaccgacatttgtaattatatttaattaagtaatttttt 21032224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 30173755 - 30173803
Alignment:
Q  179 acggacacgacaccgacacttgtaattatattaaattatgtgatttttt 227  Q
    |||||||||||||||||||||||||||| | | | |||||| |||||||    
T  30173755 acggacacgacaccgacacttgtaattacactgagttatgtaatttttt 30173803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 31015097 - 31015053
Alignment:
Q  191 ccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||| | | |||||||||||||| |||||||||    
T  31015097 ccgacacttgtaattacactgaattatgtgattttctcaaattat 31015053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 9e-20; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 22652039 - 22651986
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22652039 gacacgacaccgacacttgtaattatattgaattatgtgattttttcaaattat 22651986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 2572052 - 2572105
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  2572052 gacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 2572105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 4298887 - 4298935
Alignment:
Q  187 gacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4298887 gacaccgacacttgtaattacattaaattatgtgattttttcaaattat 4298935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 8343032 - 8342982
Alignment:
Q  185 acgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  8343032 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 8342982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 20873128 - 20873079
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  20873128 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 20873079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 15816126 - 15816178
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||| |||||| | ||||||||||||||||||||||||||    
T  15816126 acacgacaccgacacttataattacactaaattatgtgattttttcaaattat 15816178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 25566903 - 25566851
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||||||||| | | ||||||||||||||||||||||||    
T  25566903 acacgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 25566851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 8343376 - 8343326
Alignment:
Q  185 acgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||| |||||||||||||| | ||||||||||||||||||||||||||    
T  8343376 acgacactgacacttgtaattacactaaattatgtgattttttcaaattat 8343326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 4948711 - 4948662
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| | | ||||||||||||||||||||||||    
T  4948711 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 4948662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 29510300 - 29510353
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||| ||||||||||||||||||||| | |||| |||||||||||||||||||    
T  29510300 gacactacaccgacacttgtaattatactgaattttgtgattttttcaaattat 29510353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 13436960 - 13437013
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||||| ||||   | ||||||||||||||||||||||||    
T  13436960 gacacgacaccgacacttgttattaccatgaattatgtgattttttcaaattat 13437013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 21465475 - 21465422
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||| ||||||||||||| ||  |||||| |||||||||||||||||    
T  21465475 gacacgacaccaacacttgtaattacatcgaattatatgattttttcaaattat 21465422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 29447106 - 29447159
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||| |||||||||||||||| ||| ||| |||||||||||||| |||||||||    
T  29447106 gacatgacaccgacacttgtagttacattgaattatgtgattttctcaaattat 29447159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 22197743 - 22197791
Alignment:
Q  187 gacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||| |||||||||||||| | |||||||||||| |||||||||||||    
T  22197743 gacactgacacttgtaattacactaaattatgtgaatttttcaaattat 22197791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 18170482 - 18170529
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaatt 233  Q
    ||||||||||| ||||||||| ||| |||||||| |||||||||||||    
T  18170482 cgacaccgacatttgtaattacattgaattatgtaattttttcaaatt 18170529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 18634050 - 18634097
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaatt 233  Q
    ||||||||||| ||||||||| ||| |||||||| |||||||||||||    
T  18634050 cgacaccgacatttgtaattacattgaattatgtaattttttcaaatt 18634097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 231
Target Start/End: Complemental strand, 26434237 - 26434194
Alignment:
Q  188 acaccgacacttgtaattatattaaattatgtgattttttcaaa 231  Q
    |||||||||||| |||||||||| |||||||||||||| |||||    
T  26434237 acaccgacacttttaattatattgaattatgtgattttctcaaa 26434194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 40332248 - 40332201
Alignment:
Q  188 acaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||| | | |||||||||||||| |||||||||    
T  40332248 acaccgacacttgtaattacactgaattatgtgattttctcaaattat 40332201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 5813651 - 5813602
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||| ||| | |||| ||||||| |||||||||||||    
T  5813651 cgacaccgacacttgtatttacactaaaatatgtgactttttcaaattat 5813602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 24613579 - 24613531
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| | | ||||||||||| ||||||||||||    
T  24613579 cgacaccgacacttgtaattacacttaattatgtgat-ttttcaaattat 24613531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 25172694 - 25172747
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||| | |||||| |||||| ||||| ||||| |||||||||    
T  25172694 gacacgacaccgacacatataattacattaaaatatgtaattttatcaaattat 25172747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 28745561 - 28745508
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||| ||||| ||||| ||| ||| |||||||||| |||||||||||||    
T  28745561 gacacgacatcgacatttgtagttacattgaattatgtgaatttttcaaattat 28745508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 30077387 - 30077436
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||| |||||||||||||| | | ||||||||||| ||||||||||||    
T  30077387 cgacacggacacttgtaattacactgaattatgtgatgttttcaaattat 30077436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 36450754 - 36450803
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||| ||||||||||||| | | |||| |||||||||||||||||||    
T  36450754 cgacacctacacttgtaattacactgaattctgtgattttttcaaattat 36450803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 11927083 - 11927135
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||| | |||||| | | |||||||||||||| |||||||||    
T  11927083 acacgacaccgacacatataattacactgaattatgtgattttatcaaattat 11927135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 9778563 - 9778510
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  9778563 gacacgacaccgacacttgtaattatactgaattatgtgattttttcaaattat 9778510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 11061077 - 11061125
Alignment:
Q  187 gacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11061077 gacaccgacacttgtaattatactaaattatgtgattttttcaaattat 11061125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 3991384 - 3991334
Alignment:
Q  185 acgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  3991384 acgacaccgacacttgtaattatactgaattatgtgattttttcaaattat 3991334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 9408333 - 9408383
Alignment:
Q  185 acgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  9408333 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 9408383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 7438769 - 7438716
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||| |||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  7438769 gacatgacaccgacacttgtaattacattgaattatgtgattttttcaaattat 7438716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 24339705 - 24339652
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||||||| | | ||||||||||||||||||||||||    
T  24339705 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 24339652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 2334313 - 2334268
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgatttttt 227  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||    
T  2334313 gacacgacaccgacacttgtaattacactaaattatgtgatttttt 2334268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 5409832 - 5409885
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||||||  | | ||||||||||||||||||||||||    
T  5409832 gacacgacaccgacacttgtaattgcactgaattatgtgattttttcaaattat 5409885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 6028688 - 6028635
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||| ||||||||| |||||||||||| || ||||||||||||    
T  6028688 gacacgacaccgacatttgtaattacattaaattatgttatattttcaaattat 6028635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 26033457 - 26033510
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||| ||||||||||||||||| | | ||||||||||||||||||||||||    
T  26033457 gacacgagaccgacacttgtaattacactgaattatgtgattttttcaaattat 26033510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 18039071 - 18039008
Alignment:
Q  173 tgaagcacggacacgacaccgacacttgtaattatattaaattatgtgatt-ttttcaaattat 235  Q
    |||| ||| ||||||||||||||||||||||||| | | |||||||||||| ||||||||||||    
T  18039071 tgaaacaccgacacgacaccgacacttgtaattacactgaattatgtgatttttttcaaattat 18039008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 235
Target Start/End: Original strand, 18215180 - 18215235
Alignment:
Q  180 cggacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||||||||| || | |  |||||||||||||||||||||||    
T  18215180 cggacacgacaccgacacttgtaactacactgcattatgtgattttttcaaattat 18215235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 3721152 - 3721103
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||| | |||||||| |||||||||||||||| |||||||||    
T  3721152 cgacaccgacacatataattatactaaattatgtgattttctcaaattat 3721103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 14077439 - 14077480
Alignment:
Q  191 ccgacacttgtaattatattaaattatgtgattttttcaaat 232  Q
    ||||||||| ||||||||||||||||||| ||||||||||||    
T  14077439 ccgacacttataattatattaaattatgttattttttcaaat 14077480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 14387467 - 14387508
Alignment:
Q  191 ccgacacttgtaattatattaaattatgtgattttttcaaat 232  Q
    ||||||||| ||||||||||||||||||| ||||||||||||    
T  14387467 ccgacacttataattatattaaattatgttattttttcaaat 14387508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 25481961 - 25481912
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||| ||||||||||||| | | ||||||||||||||||||||||||    
T  25481961 cgacaccaacacttgtaattacactgaattatgtgattttttcaaattat 25481912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 27945104 - 27945051
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||||||| | | |||||||| ||||| |||||||||    
T  27945104 gacacgacaccgacacttgtaattacactgaattatgtaattttctcaaattat 27945051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 43027465 - 43027518
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| ||| | |  |||||||||||||||||||||||    
T  43027465 gacacgacaccgacacttgtatttacactgcattatgtgattttttcaaattat 43027518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 1885635 - 1885587
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgattttttcaaa 231  Q
    ||||||||||||||||||| |||| ||| |||||||| |||||||||||    
T  1885635 acacgacaccgacacttgtgattacattgaattatgtcattttttcaaa 1885587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 11272582 - 11272637
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaat--tatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||||||| | | |||  |||||||||||||||||||||    
T  11272582 gacacgacaccgacacttgtaattacactgaattatatgtgattttttcaaattat 11272637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 38143281 - 38143233
Alignment:
Q  187 gacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||| |||| | |||||| ||||||||||||||||||||||||||||    
T  38143281 gacaccaacacatataattacattaaattatgtgattttttcaaattat 38143233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 231
Target Start/End: Complemental strand, 48438604 - 48438560
Alignment:
Q  187 gacaccgacacttgtaattatattaaattatgtgattttttcaaa 231  Q
    ||||||||||| |||||||| ||| ||||||||||||||||||||    
T  48438604 gacaccgacacgtgtaattacattgaattatgtgattttttcaaa 48438560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 4024087 - 4024037
Alignment:
Q  185 acgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||| |||| |||| ||||||||||||||||||| ||||||| |||||||    
T  4024087 acgacgccgatacttataattatattaaattatgtcatttttttaaattat 4024037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 227
Target Start/End: Complemental strand, 21560563 - 21560521
Alignment:
Q  185 acgacaccgacacttgtaattatattaaattatgtgatttttt 227  Q
    |||||||||||||||||||||| | | ||||||||||||||||    
T  21560563 acgacaccgacacttgtaattacactgaattatgtgatttttt 21560521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 32094016 - 32094070
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtga-ttttttcaaattat 235  Q
    ||||||||||||||| ||||||||| | | |||||||||| ||||||||||||||    
T  32094016 gacacgacaccgacatttgtaattacactgaattatgtgatttttttcaaattat 32094070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 35862024 - 35861974
Alignment:
Q  185 acgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||| |||||||  ||||| ||| ||||||||||||||||||||||||    
T  35862024 acgacacagacacttacaattacattgaattatgtgattttttcaaattat 35861974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 7058489 - 7058436
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||| ||||||||||||| | | |||||  |||||||||||||||||    
T  7058489 gacacgacaccaacacttgtaattacactgaattacatgattttttcaaattat 7058436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 7197297 - 7197346
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| ||| |||||  ||||||||| |||||||    
T  7197297 cgacaccgacacttgtaattacattgaattaaatgatttttttaaattat 7197346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 7328687 - 7328740
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||| | |||||| | |||||||||| ||||| |||||||||    
T  7328687 gacacgacaccgacacatataattacactaaattatgttattttctcaaattat 7328740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 11665436 - 11665489
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||| |||| |||||||| |||||| | | ||||||||||||||||||||||||    
T  11665436 gacatgacatcgacacttataattagactgaattatgtgattttttcaaattat 11665489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 13770754 - 13770701
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||| ||||||||||||||| | | |||||||| ||||||| |||||||    
T  13770754 gacacgacaacgacacttgtaattacactgaattatgtaatttttttaaattat 13770701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 15680868 - 15680827
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgatttttt 227  Q
    |||||||||||||| |||||| | ||||||||||||||||||    
T  15680868 cgacaccgacacttataattacactaaattatgtgatttttt 15680827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 15902885 - 15902832
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||| |||||||||| | |||||| | |||||||||||||||| |||||||||    
T  15902885 gacacaacaccgacacatataattacactaaattatgtgattttatcaaattat 15902832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 21880211 - 21880162
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| | | |||||||| ||||| |||||||||    
T  21880211 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattat 21880162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 43243139 - 43243098
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgattt 224  Q
    |||||||| ||||||||||||||| |||||||||||| ||||    
T  43243139 acacgacatcgacacttgtaattacattaaattatgttattt 43243098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 19206108 - 19206060
Alignment:
Q  187 gacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||| | |||||||| | |||||||||||||| |||||||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattat 19206060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 24146874 - 24146826
Alignment:
Q  187 gacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||| | |||||||||| |||||||||||||| | |||||||    
T  24146874 gacaccgacacatataattatattgaattatgtgattttctaaaattat 24146826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 35297669 - 35297721
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||| |||| | |||||||| | |||||||||||||| |||||||||    
T  35297669 acacgacaccaacacatataattataatgaattatgtgattttctcaaattat 35297721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 42720891 - 42720939
Alignment:
Q  187 gacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||| ||||| | |||||| ||| ||||||||||||||||||||||||    
T  42720891 gacactgacacatataattacatttaattatgtgattttttcaaattat 42720939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 426514 - 426563
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  426514 cgacaccgacacttgtaattacatttaattatgtgattttttcaaattat 426563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 10770670 - 10770723
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||||||| | | ||||||||||||||||||||||||    
T  10770670 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 10770723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 16766760 - 16766707
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||||||| | | ||||||||||||||||||||||||    
T  16766760 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 16766707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 403864 - 403913
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||| ||| | ||||||||||||||||||||||||||    
T  403864 cgacaccgacacttgtagttacactaaattatgtgattttttcaaattat 403913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 7930368 - 7930315
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||| ||||  | ||||||||||||||||||||||||||    
T  7930368 gacacgacaccgacacttgaaatttcactaaattatgtgattttttcaaattat 7930315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 9107366 - 9107419
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||||||| | | |||| |||||||||||||||||||    
T  9107366 gacacgacaccgacacttgtaattacactgaattttgtgattttttcaaattat 9107419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 17841589 - 17841638
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||| |||||||||||| | ||||||||||||||||||||||||||    
T  17841589 cgacaccgtcacttgtaattacactaaattatgtgattttttcaaattat 17841638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 34595193 - 34595144
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| | | ||||||||||||||||||||||||    
T  34595193 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 34595144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 31384982 - 31384930
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||| |||||||||||||| | | ||||||||||||||||||||||||    
T  31384982 acacgacactgacacttgtaattacactgaattatgtgattttttcaaattat 31384930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 4878002 - 4877952
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtga-ttttttcaaattat 235  Q
    ||||||||||||||||||||||| | |||||||||| ||||||||||||||    
T  4878002 cgacaccgacacttgtaattatacttaattatgtgacttttttcaaattat 4877952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 853859 - 853908
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||  | | ||||||||||||||||||||||||    
T  853859 cgacaccgacacttgtaattgcacttaattatgtgattttttcaaattat 853908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 4118341 - 4118382
Alignment:
Q  194 acacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  4118341 acacttgtaattacatttaattatgtgattttttcaaattat 4118382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 5970104 - 5970157
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||| ||| ||||||||| | | ||||||||||||||||||||||||    
T  5970104 gacacgacacccacatttgtaattacactgaattatgtgattttttcaaattat 5970157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 7801156 - 7801205
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||||||   | ||||||||||||||||||||||||    
T  7801156 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattat 7801205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 7977830 - 7977879
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| | | |||||||| |||||||||||||||    
T  7977830 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattat 7977879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 8365515 - 8365568
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||||||| |   ||||||||||| ||||||||||||    
T  8365515 gacacgacaccgacacttgtaattacaccgaattatgtgatattttcaaattat 8365568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 9522954 - 9522901
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||| ||||||||||||||||||| | | |||||||||||||||| |||||||    
T  9522954 gacacaacaccgacacttgtaattacactgaattatgtgatttttttaaattat 9522901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 12696387 - 12696334
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||| |||||||||||||| | | |||||||| |||||||||||||||    
T  12696387 gacacgacactgacacttgtaattacactgaattatgtaattttttcaaattat 12696334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 21395304 - 21395356
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||||||| | |||||||||| ||||| |||||||||    
T  21395304 gacacgacaccgacacttgtaattacactaaattatgt-attttctcaaattat 21395356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 28715354 - 28715305
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| | | |||||||| |||||||||||||||    
T  28715354 cgacaccgacacttgtaattacactgaattatgtcattttttcaaattat 28715305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 33001289 - 33001338
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||| | |||||| ||| ||||||||||||||||||||||||    
T  33001289 cgacaccgacacatataattacatttaattatgtgattttttcaaattat 33001338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 7938174 - 7938126
Alignment:
Q  187 gacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||| |||||| | |||||||| |||||||||||||||||    
T  7938174 gacaccgacacttataattacactaaattatatgattttttcaaattat 7938126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 15489733 - 15489781
Alignment:
Q  187 gacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||||| ||| |||| ||| |||||||||||||||    
T  15489733 gacaccgacacttgtaattacattgaattgtgtaattttttcaaattat 15489781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 235
Target Start/End: Original strand, 9025488 - 9025543
Alignment:
Q  180 cggacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||| | |||||| | | |||||||||||||| |||||||||    
T  9025488 cggacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 9025543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 16833365 - 16833318
Alignment:
Q  188 acaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||| | | || |||||||||||||||||||||    
T  16833365 acaccgacacttgtaattacactgaagtatgtgattttttcaaattat 16833318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 3209441 - 3209391
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgatt-ttttcaaattat 235  Q
    ||||||||||||||||||| | | |||||||||||||| ||||||||||||    
T  3209441 cgacaccgacacttgtaataacactaaattatgtgatttttttcaaattat 3209391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 9617494 - 9617444
Alignment:
Q  185 acgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||| | |||||| ||| |||||||||||||| |||||||||    
T  9617494 acgacaccgacacatataattacattgaattatgtgattttctcaaattat 9617444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 9911524 - 9911566
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattt 224  Q
    ||||||||||||||||||||||||| | | |||||||||||||    
T  9911524 gacacgacaccgacacttgtaattacactgaattatgtgattt 9911566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 17302620 - 17302566
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgatt-ttttcaaattat 235  Q
    |||||||||  |||||||||||||| ||| |||||||||||| ||||||||||||    
T  17302620 gacacgacaatgacacttgtaattacattgaattatgtgatttttttcaaattat 17302566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 2117138 - 2117086
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||| ||||||| |||||  ||| ||||||||||||||||||||||||    
T  2117138 gacacgacac-gacacttataattgcattgaattatgtgattttttcaaattat 2117086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 4864122 - 4864073
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||| |||| | |||||| |||||||||||| |||||||||||||||    
T  4864122 cgacaccaacacatataattaaattaaattatgtcattttttcaaattat 4864073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 6898281 - 6898330
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| | | |||||||| |||| ||||||||||    
T  6898281 cgacaccgacacttgtaattacacttaattatgtaatttgttcaaattat 6898330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 7086858 - 7086805
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||| |||||||||| | |||||| | |||||||||||||||| |||||||||    
T  7086858 gacactacaccgacacatataattacactaaattatgtgattttctcaaattat 7086805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 8776973 - 8777022
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||| ||||||||||||| | | |||| |||||||||||||||||||    
T  8776973 cgacaccaacacttgtaattacactgaattttgtgattttttcaaattat 8777022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 9629442 - 9629393
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||| | |||||| ||| |||||||||||||| |||||||||    
T  9629442 cgacaccgacacatataattacattgaattatgtgattttctcaaattat 9629393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 19369880 - 19369831
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaa 231  Q
    |||||||||||||||||||| |||| ||| |||||||| ||||| |||||    
T  19369880 gacacgacaccgacacttgtgattacattgaattatgtcattttctcaaa 19369831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 24645539 - 24645490
Alignment:
Q  187 gacaccgacacttgtaattatattaaattatgtgatt-ttttcaaattat 235  Q
    ||||||||||||||||| |||| | |||||||||||| ||||||||||||    
T  24645539 gacaccgacacttgtaactatactgaattatgtgatttttttcaaattat 24645490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 28152157 - 28152109
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| | | ||||||||||| ||||||||||||    
T  28152157 cgacaccgacacttgtaattacactgaattatgtgat-ttttcaaattat 28152109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 9195751 - 9195803
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||| | |||||| | |||||||||| ||||| |||||||||    
T  9195751 acacgacaccgacacatataattacactaaattatgtcattttctcaaattat 9195803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 31959213 - 31959169
Alignment:
Q  191 ccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||| | |  |||||||||||||||||||||||    
T  31959213 ccgacacttgtaattacactgcattatgtgattttttcaaattat 31959169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 5894829 - 5894882
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| ||| |||||||||| |||||||||||||||||    
T  5894829 gacacgacaccgacacttgtagttagattaaattatatgattttttcaaattat 5894882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 31084386 - 31084333
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||    
T  31084386 gacacgacatcgacacttgtaattacattgaattatgtgattttttcaaattat 31084333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 13287394 - 13287448
Alignment:
Q  181 ggacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||||||| ||| | | ||||||||||||||||||||||||    
T  13287394 ggacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattat 13287448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 6247681 - 6247632
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| | | ||||||||||||||||||||||||    
T  6247681 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 6247632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 8420086 - 8420037
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  8420086 cgacaccgacacttgtaattacattgaattatgttattttttcaaattat 8420037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 19579764 - 19579711
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||||||  | |||||||||||||||| |||||||||    
T  19579764 gacacgacaccgacacttgtaattgcactaaattatgtgattttctcaaattat 19579711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 21191056 - 21191105
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| | | ||||||||||||||||||||||||    
T  21191056 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 21191105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 33178084 - 33178035
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| | |||||||||||||||||| |||||||    
T  33178084 cgacaccgacacttgtaattacactaaattatgtgatttttttaaattat 33178035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 39698604 - 39698551
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||| |||||||||||||| | | ||||||||||||||||||||||||    
T  39698604 gacacgacactgacacttgtaattacactgaattatgtgattttttcaaattat 39698551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 14674323 - 14674279
Alignment:
Q  191 ccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||| | ||||||||||||||||||||||||||    
T  14674323 ccgacacttgtaattacactaaattatgtgattttttcaaattat 14674279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 10298629 - 10298579
Alignment:
Q  185 acgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||||||| |||  ||||||||| |||||||||||||    
T  10298629 acgacaccgacacttgtaattacattgtattatgtgactttttcaaattat 10298579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 7677768 - 7677715
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||| |||||  | | ||||||||||||||||||||||||    
T  7677768 gacacgacaccgacacttctaattgcactgaattatgtgattttttcaaattat 7677715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 21576745 - 21576794
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||| ||||||||||||||| | | ||||||||||||||||||||||||    
T  21576745 cgacatcgacacttgtaattacactgaattatgtgattttttcaaattat 21576794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 22423808 - 22423861
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||  | |||||||||| |||||||||||||| |||||||||    
T  22423808 gacacgacaccgacatatataattatattgaattatgtgattttctcaaattat 22423861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 43564940 - 43564891
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||| |||||| | ||||||||||||||||| ||||||||    
T  43564940 cgacaccgacacttataattacactaaattatgtgatttttccaaattat 43564891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 12199992 - 12199948
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgatttttt 227  Q
    ||||||||||||||||||||||| || | ||||||||||||||||    
T  12199992 acacgacaccgacacttgtaattgtactgaattatgtgatttttt 12199948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 12641736 - 12641684
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||| ||||| || ||||||| |||||||||||||||||| |||||||    
T  12641736 acacgacactgacacgtgcaattatactaaattatgtgatttttttaaattat 12641684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 42893418 - 42893370
Alignment:
Q  187 gacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||||| | |  |||||||||||||||||||||||    
T  42893418 gacaccgacacttgtaattacactggattatgtgattttttcaaattat 42893370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 15405062 - 15405104
Alignment:
Q  193 gacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||| ||| |||||| |||||||||||||||||    
T  15405062 gacacttgtaattacattgaattatatgattttttcaaattat 15405104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 12160007 - 12159962
Alignment:
Q  190 accgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||| ||||||||| ||||||||||||| |||||| |||||||    
T  12160007 accgacatttgtaattacattaaattatgtgttttttttaaattat 12159962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 15382538 - 15382497
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgatttttt 227  Q
    ||||||||||||||||||||||| | |||||| |||||||||    
T  15382538 cgacaccgacacttgtaattatactgaattatatgatttttt 15382497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 15884047 - 15884006
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgatttttt 227  Q
    ||||||||||||||||||||| | | ||||||||||||||||    
T  15884047 cgacaccgacacttgtaattacactgaattatgtgatttttt 15884006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 21351901 - 21351954
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||| |||||||||||||||||||| | | |||||||||| |||||| ||||||    
T  21351901 gacatgacaccgacacttgtaattacactgaattatgtgactttttccaattat 21351954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 21522813 - 21522760
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||| ||||||||| | | |||||||| ||||||| |||||||    
T  21522813 gacacgacaccgacaattgtaattacactgaattatgttattttttaaaattat 21522760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 21533379 - 21533326
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||| ||||||||| | | |||||||| ||||||| |||||||    
T  21533379 gacacgacaccgacaattgtaattacactgaattatgttattttttaaaattat 21533326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 21542093 - 21542040
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||||||| | | |||||||| || |||| |||||||    
T  21542093 gacacgacaccgacacttgtaattacactgaattatgttatctttttaaattat 21542040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 24906305 - 24906350
Alignment:
Q  190 accgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||| | | |||||||| |||||||||||||||    
T  24906305 accgacacttgtaattacactgaattatgtcattttttcaaattat 24906350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 37328840 - 37328893
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||| |||||||| | | |||| |||||||||| ||||||||    
T  37328840 gacacgacaccgacacatgtaattacactgaattttgtgatttttacaaattat 37328893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 30183611 - 30183559
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||||||||| |   ||| ||||||| ||||||||||||    
T  30183611 acacgacaccgacacttgtaattaaaccgaataatgtgatattttcaaattat 30183559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 36838605 - 36838553
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||| | |||||| | |||||||||| ||||| |||||||||    
T  36838605 acacgacaccgacacatataattacactaaattatgtaattttctcaaattat 36838553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 12895112 - 12895165
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  12895112 gacacgacaccgacacttgtaattactttgaattatgtgattttttcaaattat 12895165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 23292986 - 23293035
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  23292986 cgacaccgacacttgtaattatactgaattatgtgattttttcaaattat 23293035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 6485613 - 6485660
Alignment:
Q  188 acaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||    
T  6485613 acaccgacacttgtaattacactaaattatgtgattttttcaaattat 6485660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 11596348 - 11596401
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||| ||||||||||||| | | ||||||||||||||||||||||||    
T  11596348 gacacgacacctacacttgtaattacactgaattatgtgattttttcaaattat 11596401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 29205501 - 29205454
Alignment:
Q  188 acaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||| | | ||||||||||||||||||||||||    
T  29205501 acaccgacacttgtaattacactgaattatgtgattttttcaaattat 29205454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 2361975 - 2362024
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||| |||||| | |||||||||| |||||||||||||||    
T  2361975 cgacaccgacacttttaattacactaaattatgtaattttttcaaattat 2362024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 3947762 - 3947815
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||| |||||||||||||| | | ||||||| ||||||||||||||||    
T  3947762 gacacgacactgacacttgtaattacactgaattatgcgattttttcaaattat 3947815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 12895274 - 12895323
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||| |||||| |  |||||||||||||||||||||||||    
T  12895274 cgacaccgacacttataattacacaaaattatgtgattttttcaaattat 12895323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 21945562 - 21945513
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| | | |||||||| |||||||||||||||    
T  21945562 cgacaccgacacttgtaattacactgaattatgtcattttttcaaattat 21945513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 24613697 - 24613750
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||| |||||||||||||||| ||| ||| |||||||||||||| |||||||||    
T  24613697 gacatgacaccgacacttgtacttacattgaattatgtgattttctcaaattat 24613750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 28084585 - 28084540
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgatttttt 227  Q
    |||||||||| |||||||||||||| ||| ||||||||||||||||    
T  28084585 gacacgacacagacacttgtaattacattgaattatgtgatttttt 28084540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 28964248 - 28964297
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||| |||||||||||||| | | ||||||||||||||||||||||||    
T  28964248 cgacacagacacttgtaattacactgaattatgtgattttttcaaattat 28964297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 54580023 - 54580072
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||| |||||| | | ||||||||||||||||||||||||    
T  54580023 cgacaccgacacttataattacactgaattatgtgattttttcaaattat 54580072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 848009 - 847961
Alignment:
Q  187 gacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||||||| | |||||||| ||||| |||||||||    
T  848009 gacaccgacacttgtaattatagtgaattatgtaattttctcaaattat 847961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 16303263 - 16303311
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgattttttcaaa 231  Q
    |||||||||||||||||||||||| | |||||||| | |||||||||||    
T  16303263 acacgacaccgacacttgtaattacactaaattatatcattttttcaaa 16303311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 27706174 - 27706226
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||  ||||||||||||| | |||||||||||||||||| |||||||    
T  27706174 acacgacactcacacttgtaattacactaaattatgtgatttttttaaattat 27706226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 35157986 - 35158034
Alignment:
Q  187 gacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||| |||||| | ||||||||||||||||| ||||||||    
T  35157986 gacaccgacacttataattacactaaattatgtgatttttccaaattat 35158034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 31800477 - 31800527
Alignment:
Q  185 acgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||| ||||||||||||||||| |||||||||| | ||||||| |||||||    
T  31800477 acgataccgacacttgtaattacattaaattatttaattttttaaaattat 31800527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 888207 - 888244
Alignment:
Q  199 tgtaattatattaaattatgtga-ttttttcaaattat 235  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  888207 tgtaattatattaaattatgtgatttttttcaaattat 888244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 4157208 - 4157160
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||  | ||||||||||||| ||||||||||||    
T  4157208 cgacaccgacacttgtaattgcactaaattatgtgat-ttttcaaattat 4157160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 6879465 - 6879510
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaa 231  Q
    ||||||||||||||||||||| | | ||||||||||||||| ||||    
T  6879465 cgacaccgacacttgtaattacacttaattatgtgatttttccaaa 6879510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 11797624 - 11797669
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgatttttt 227  Q
    ||||| |||||||||||||| |||| |||||||||||| |||||||    
T  11797624 gacacaacaccgacacttgtgattacattaaattatgtcatttttt 11797669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 12797338 - 12797386
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| | | |||||||||| |||||||||||||    
T  12797338 cgacaccgacacttgtaattacactgaattatgtga-tttttcaaattat 12797386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 19482731 - 19482678
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||| ||||||||||||| |   ||||||||||| ||||||||||||    
T  19482731 gacacgacaccaacacttgtaattacaccgaattatgtgatattttcaaattat 19482678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 21658818 - 21658863
Alignment:
Q  190 accgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||  ||||||| |||||||||||||||| |||||||||    
T  21658818 accgacacttaaaattatagtaaattatgtgattttctcaaattat 21658863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 37203315 - 37203274
Alignment:
Q  194 acacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||| | |||||||||| |||||||||||||||    
T  37203315 acacttgtaattacactaaattatgtcattttttcaaattat 37203274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 42640588 - 42640547
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgatttttt 227  Q
    ||||||||||||||||||||| | | ||||||||||||||||    
T  42640588 cgacaccgacacttgtaattacactgaattatgtgatttttt 42640547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 44081573 - 44081626
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||| ||| ||||| | |||||| |||||||||| |||||||||||||||||    
T  44081573 gacacggcactgacacatataattacattaaattatatgattttttcaaattat 44081626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 51701321 - 51701268
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||  ||||||||||||| | | |||||||| |||||||||||||||    
T  51701321 gacacgacactaacacttgtaattacactcaattatgtaattttttcaaattat 51701268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 4157495 - 4157455
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttt 226  Q
    ||||||||||||||||||||  | |||||||||||||||||    
T  4157495 cgacaccgacacttgtaattgcactaaattatgtgattttt 4157455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 7214523 - 7214571
Alignment:
Q  187 gacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||| | | |||||| |||||||||||||||||| |||||||||    
T  7214523 gacaccgacgcatataattacattaaattatgtgattttctcaaattat 7214571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 14465088 - 14465124
Alignment:
Q  199 tgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  14465088 tgtaattacattgaattatgtgattttttcaaattat 14465124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 30299008 - 30298956
Alignment:
Q  184 cacgacaccgacacttgtaattatattaaattatgtga-ttttttcaaattat 235  Q
    ||||||||||||||||||||||| | | |||||||| | ||||||||||||||    
T  30299008 cacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattat 30298956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 30327876 - 30327824
Alignment:
Q  184 cacgacaccgacacttgtaattatattaaattatgtga-ttttttcaaattat 235  Q
    ||||||||||||||||||||||| | | |||||||| | ||||||||||||||    
T  30327876 cacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattat 30327824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 33950194 - 33950146
Alignment:
Q  187 gacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||| | | |||| |||||||||||||||||| |||||||||    
T  33950194 gacaccgacacatatgattacattaaattatgtgattttctcaaattat 33950146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 17750 - 17798
Alignment:
Q  187 gacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattat 17798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 20539672 - 20539723
Alignment:
Q  184 cacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||||| | |||||||| |||||||||||||||||    
T  20539672 cacgacaccgacacttgtaattacactaaattatatgattttttcaaattat 20539723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 18255980 - 18256029
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||| |||||| |||||||||||||||||||| |||||||    
T  18255980 cgacaccgacacttctaattacattaaattatgtgatttttttaaattat 18256029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 30717526 - 30717579
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||| ||||||||||||||| | | ||||||||||||||||||||||||    
T  30717526 gacacgacatcgacacttgtaattacactgaattatgtgattttttcaaattat 30717579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 37559036 - 37558987
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  37559036 cgacaccgacacttgtaattacattgaattatgtgatttttacaaattat 37558987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 38442366 - 38442320
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaat 232  Q
    |||||||||||||| |||||||||| |||||||||||||||| ||||    
T  38442366 cgacaccgacacttataattatattgaattatgtgatttttttaaat 38442320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 2438719 - 2438768
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| | | |||||||||||||||| |||||||    
T  2438719 cgacaccgacacttgtaattacactgaattatgtgattttttgaaattat 2438768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 5040793 - 5040752
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgatttttt 227  Q
    ||||||||||||||||||||| ||| ||||||||||||||||    
T  5040793 cgacaccgacacttgtaattacattgaattatgtgatttttt 5040752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 12668419 - 12668472
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||| |||||| | | |||||||| |||||||||||||||    
T  12668419 gacacgacaccgacacttataattacactgaattatgtcattttttcaaattat 12668472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 30335476 - 30335427
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||| ||||||||| | |||||||||| |||||||||||||||    
T  30335476 cgacaccgacatttgtaattacactaaattatgtcattttttcaaattat 30335427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 30404850 - 30404899
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||| |||||||||||||||| | | ||||||||||||||||||||||||    
T  30404850 cgacgccgacacttgtaattacactgaattatgtgattttttcaaattat 30404899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 37419806 - 37419753
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||| |||||||||||| | | |||| |||||||||||||||||||    
T  37419806 gacacgacaccggcacttgtaattacactgaattttgtgattttttcaaattat 37419753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 974809 - 974757
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||||||||| | | ||| ||||||| ||||||||||||    
T  974809 acacgacaccgacacttgtaattacactgaataatgtgatcttttcaaattat 974757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 15657926 - 15657874
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||| ||||||||| | | ||||||||||||||| ||||||||    
T  15657926 acacgacaccgacatttgtaattacactgaattatgtgatttttacaaattat 15657874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 18841014 - 18841062
Alignment:
Q  187 gacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||||||||| | | |||||||| |||||||||||||||    
T  18841014 gacaccgacacttgtaattacacttaattatgtaattttttcaaattat 18841062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 14996219 - 14996273
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtga-ttttttcaaattat 235  Q
    |||| |||||||||||||||||||| | |||||||| ||| ||||||||||||||    
T  14996219 gacaagacaccgacacttgtaattacactaaattatatgatttttttcaaattat 14996273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 18420429 - 18420483
Alignment:
Q  181 ggacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||| |||||||||||| |||||  ||| |||||||||||||| |||||||||    
T  18420429 ggacacaacaccgacacttataattgcattgaattatgtgattttctcaaattat 18420483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 19536397 - 19536447
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtga-ttttttcaaattat 235  Q
    ||||||||||||||||||||| | | |||||||||| ||||||||||||||    
T  19536397 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattat 19536447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 23058438 - 23058492
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtga-ttttttcaaattat 235  Q
    ||||||||||||||||||||||||| | |  ||||||||| ||||||||||||||    
T  23058438 gacacgacaccgacacttgtaattacactggattatgtgatttttttcaaattat 23058492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 33153487 - 33153437
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaat 232  Q
    |||||||||| |||||||||||||| | | |||||||||||||||| ||||    
T  33153487 gacacgacacggacacttgtaattacactgaattatgtgatttttttaaat 33153437  T

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Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 13204088 - 13204035
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||| ||||| | || |||||||||||||||| ||||| |||||||||    
T  13204088 gacacgacactgacacatatagttatattaaattatgtaattttctcaaattat 13204035  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 234
Target Start/End: Complemental strand, 15349884 - 15349851
Alignment:
Q  201 taattatattaaattatgtgattttttcaaatta 234  Q
    ||||||||||||||||||||||||||| ||||||    
T  15349884 taattatattaaattatgtgatttttttaaatta 15349851  T

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Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 15972932 - 15972883
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| | | |||| ||| |||||||||||||||    
T  15972932 cgacaccgacacttgtaattacactgaattgtgtaattttttcaaattat 15972883  T

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Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 18422022 - 18421973
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| | | ||||||||||| |||| |||||||    
T  18422022 cgacaccgacacttgtaattacactgaattatgtgatatttttaaattat 18421973  T

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Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 34337177 - 34337225
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||| ||||||||||||||||||||     ||||||||||||||||||||||||    
T  34337177 gacaggacaccgacacttgtaatta-----aattatgtgattttttcaaattat 34337225  T

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Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 11223864 - 11223908
Alignment:
Q  187 gacaccgacacttgtaattatattaaattatgtgattttttcaaa 231  Q
    |||||||||||||||||||| | | |||||||| |||||||||||    
T  11223864 gacaccgacacttgtaattacactgaattatgttattttttcaaa 11223908  T

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Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 36756341 - 36756393
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||| |||||| | | |||||||| |||| ||||||||||    
T  36756341 acacgacaccgacacttataattacactgaattatgttatttcttcaaattat 36756393  T

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Target: scaffold0722 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 7032 - 7081
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||| ||||||||||||||| |||||||||| |||||||||||||||    
T  7032 cgacacctacacttgtaattatactaaattatgtaattttttcaaattat 7081  T

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Target: scaffold0223 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 20235 - 20182
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||| |||||||||||||| | | ||||||||||||||||||||||||    
T  20235 gacacgacactgacacttgtaattacactgaattatgtgattttttcaaattat 20182  T

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Target: scaffold0652 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 462 - 511
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| | | |||| |||||||||||||||||||    
T  462 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattat 511  T

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Target: scaffold0450 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 8631 - 8684
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||| |||||||||||   ||||||||||| ||||||||||||    
T  8631 gacacgacaccgacatttgtaattataccgaattatgtgatattttcaaattat 8684  T

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Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 8857 - 8808
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||||||| | ||||| || |||||||||||||||||    
T  8857 cgacaccgacacttgtaattacactaaataatatgattttttcaaattat 8808  T

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Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 46741 - 46692
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||| ||||||||| | | ||||||||||||||||||||||||    
T  46741 cgacaccgacatttgtaattacactgaattatgtgattttttcaaattat 46692  T

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Target: scaffold0025 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 23832 - 23779
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgatt-ttttcaaattat 235  Q
    |||||||||||||||||||||||| | | |||||||||||| ||||||||||||    
T  23832 acacgacaccgacacttgtaattacactgaattatgtgatttttttcaaattat 23779  T

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Target: scaffold0236 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 25765 - 25817
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||| |||||| | |||||||||||||||| || ||||||    
T  25765 acacgacaccgacacttataattacactaaattatgtgattttctctaattat 25817  T

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Target: scaffold0136 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 3846 - 3898
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||| |||||||||||||| | | |||||||||||||||| |||||||    
T  3846 acacgacactgacacttgtaattacactgaattatgtgatttttttaaattat 3898  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 241656 - 241604
Alignment:
Q  183 acacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||||||  |||||| | ||||||||||||||||| ||||||||    
T  241656 acacgacaccgacactcataattacactaaattatgtgatttttccaaattat 241604  T

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Target: scaffold0021 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 231
Target Start/End: Complemental strand, 130538 - 130496
Alignment:
Q  189 caccgacacttgtaattatattaaattatgtgattttttcaaa 231  Q
    |||||||||||||||||| | | ||||||||||||||||||||    
T  130538 caccgacacttgtaattacactgaattatgtgattttttcaaa 130496  T

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Target: scaffold0697 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 1703 - 1654
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||| ||||||||  ||||||| ||||||| |||||||||    
T  1703 cgacaccgacacttataattataccaaattatatgattttctcaaattat 1654  T

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Target: scaffold0171 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 23483 - 23438
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgatttttt 227  Q
    |||||||||||||||||| |||||| | | ||||||||||||||||    
T  23483 gacacgacaccgacacttataattacactgaattatgtgatttttt 23438  T

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Target: scaffold0103 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 51862 - 51821
Alignment:
Q  194 acacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    ||||||||||||| | | ||||||||||||||||||||||||    
T  51862 acacttgtaattacactgaattatgtgattttttcaaattat 51821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 2991 - 2946
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgatttttt 227  Q
    |||||||||| || ||||||||||| | ||||||||||||||||||    
T  2991 gacacgacactgatacttgtaattacactaaattatgtgatttttt 2946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 70337 - 70288
Alignment:
Q  186 cgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||||| |||||| | | |||||||| |||||||||||||||    
T  70337 cgacaccgacacttataattacactgaattatgttattttttcaaattat 70288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 53243 - 53190
Alignment:
Q  182 gacacgacaccgacacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||| ||||||||||| |||||| | | |||||||||||||| |||||||||    
T  53243 gacacggcaccgacacttataattacactgaattatgtgattttctcaaattat 53190  T

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Target: scaffold0361 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 14580 - 14540
Alignment:
Q  195 cacttgtaattatattaaattatgtgattttttcaaattat 235  Q
    |||||||||||| | | ||||||||||||||||||||||||    
T  14580 cacttgtaattacactgaattatgtgattttttcaaattat 14540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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