View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15214_low_3 (Length: 346)
Name: NF15214_low_3
Description: NF15214
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15214_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 5 - 326
Target Start/End: Original strand, 44022553 - 44022876
Alignment:
| Q |
5 |
agtgagaagaaaaatgtcattaatatcaccaaaatgcaacacgtattttgcaaccgagttaagccataatgtgcaggtcactggtgttgattgattatga |
104 |
Q |
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| T |
44022553 |
agtgagaagaaaaatgtcattaatatcaccaaaatgcaacacgtattttgcaaccgagttaagccataatgtgcaggtcactggtgttgattgattatga |
44022652 |
T |
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| Q |
105 |
tattatagcttatgnnnnnnnnncttcatttgatagtctcaagaataatacaaatcaacataggatagta---ttaataataacgataatgatgatgtga |
201 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
44022653 |
tattatagcttatgatttttttt-ttcatttgatagtctcaagaataatacaaatcaacataggatagtagtattaataataacgataatgatgatgtga |
44022751 |
T |
|
| Q |
202 |
tacttaccaataatttgcacaatttgttcccttattatgttaagagagtccacgtaaagtaaagtacgtactatttgaagannnnnnnnnnnnnngtgag |
301 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |
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| T |
44022752 |
tacttaccaataatttgcacaatttgttcccttattatgttaagagagtccacgtaaagtaaagtacgtactatttgaacatttttattttttttgtgag |
44022851 |
T |
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| Q |
302 |
aactttttgaactttcgctatgtat |
326 |
Q |
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||||||||||||||||||||||||| |
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| T |
44022852 |
aactttttgaactttcgctatgtat |
44022876 |
T |
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