View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15215_high_18 (Length: 226)

Name: NF15215_high_18
Description: NF15215
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15215_high_18
NF15215_high_18
[»] chr1 (23 HSPs)
chr1 (1-119)||(51121905-51122023)
chr1 (30-119)||(51123557-51123646)
chr1 (1-124)||(42134477-42134600)
chr1 (1-124)||(47269462-47269585)
chr1 (1-71)||(4855972-4856042)
chr1 (1-109)||(6818684-6818792)
chr1 (143-226)||(24416082-24416165)
chr1 (1-83)||(15104477-15104559)
chr1 (1-71)||(34778144-34778214)
chr1 (30-119)||(35478087-35478176)
chr1 (1-109)||(2869589-2869697)
chr1 (6-70)||(31238506-31238570)
chr1 (143-226)||(24310520-24310603)
chr1 (1-72)||(25278374-25278445)
chr1 (1-119)||(35479981-35480099)
chr1 (90-119)||(5784929-5784958)
chr1 (90-119)||(11152545-11152574)
chr1 (9-70)||(27087332-27087393)
chr1 (90-119)||(31803762-31803791)
chr1 (90-119)||(44159356-44159385)
chr1 (90-119)||(45379085-45379114)
chr1 (1-70)||(46583562-46583631)
chr1 (1-70)||(51896158-51896227)
[»] chr2 (27 HSPs)
chr2 (1-116)||(17946097-17946212)
chr2 (2-125)||(7744037-7744160)
chr2 (30-122)||(17948929-17949021)
chr2 (30-119)||(7745274-7745363)
chr2 (1-109)||(39664774-39664882)
chr2 (1-72)||(16763123-16763194)
chr2 (1-119)||(15372499-15372617)
chr2 (1-83)||(40560259-40560341)
chr2 (30-119)||(41144-41233)
chr2 (1-70)||(16377223-16377292)
chr2 (1-109)||(14389110-14389218)
chr2 (30-121)||(11021531-11021622)
chr2 (1-120)||(11315341-11315460)
chr2 (1-120)||(29909666-29909785)
chr2 (2-61)||(42519232-42519291)
chr2 (90-122)||(33190-33222)
chr2 (1-109)||(17696216-17696324)
chr2 (1-64)||(39455224-39455287)
chr2 (1-72)||(41706586-41706657)
chr2 (90-121)||(42880873-42880904)
chr2 (1-64)||(44709771-44709834)
chr2 (3-64)||(2766989-2767050)
chr2 (1-70)||(19908272-19908341)
chr2 (2-63)||(25619716-25619777)
chr2 (90-119)||(28248237-28248266)
chr2 (87-119)||(363739-363771)
chr2 (4-120)||(37417272-37417388)
[»] chr8 (20 HSPs)
chr8 (8-120)||(5075367-5075479)
chr8 (30-121)||(44620671-44620762)
chr8 (30-119)||(9186647-9186736)
chr8 (1-109)||(13108362-13108470)
chr8 (1-109)||(13282488-13282596)
chr8 (1-72)||(8609813-8609884)
chr8 (52-119)||(9186916-9186983)
chr8 (1-119)||(9184383-9184501)
chr8 (1-109)||(26242340-26242448)
chr8 (1-109)||(41825670-41825778)
chr8 (1-80)||(9673191-9673270)
chr8 (1-124)||(31201149-31201272)
chr8 (2-64)||(38547283-38547345)
chr8 (46-119)||(23811583-23811656)
chr8 (3-62)||(13486127-13486186)
chr8 (2-72)||(22272383-22272453)
chr8 (30-72)||(27692837-27692879)
chr8 (90-119)||(33748332-33748361)
chr8 (1-70)||(41042610-41042679)
chr8 (1-109)||(42941784-42941892)
[»] chr3 (28 HSPs)
chr3 (30-120)||(33051467-33051557)
chr3 (30-118)||(49494477-49494565)
chr3 (1-121)||(41021009-41021129)
chr3 (1-109)||(51684620-51684728)
chr3 (1-109)||(42279517-42279625)
chr3 (1-109)||(53190785-53190893)
chr3 (16-97)||(33047535-33047616)
chr3 (3-119)||(23774152-23774268)
chr3 (1-64)||(21348778-21348841)
chr3 (1-72)||(35905738-35905809)
chr3 (1-64)||(46112542-46112605)
chr3 (1-119)||(23888778-23888896)
chr3 (3-64)||(17515365-17515426)
chr3 (87-124)||(40963457-40963494)
chr3 (30-119)||(48635375-48635464)
chr3 (1-109)||(2226178-2226286)
chr3 (1-109)||(27899107-27899215)
chr3 (1-72)||(54898484-54898555)
chr3 (1-119)||(2977335-2977453)
chr3 (30-120)||(23887197-23887287)
chr3 (1-71)||(41977798-41977868)
chr3 (1-63)||(48633933-48633995)
chr3 (81-119)||(49496002-49496040)
chr3 (1-70)||(30599944-30600013)
chr3 (90-119)||(33111841-33111870)
chr3 (90-119)||(40508493-40508522)
chr3 (87-119)||(26447723-26447755)
chr3 (4-64)||(46197775-46197835)
[»] chr5 (19 HSPs)
chr5 (1-119)||(27349156-27349274)
chr5 (38-119)||(27350544-27350625)
chr5 (30-119)||(40330517-40330606)
chr5 (1-109)||(17574328-17574436)
chr5 (1-109)||(18625014-18625122)
chr5 (1-109)||(36057619-36057727)
chr5 (1-121)||(18728608-18728728)
chr5 (30-119)||(32835876-32835965)
chr5 (1-121)||(35395331-35395451)
chr5 (1-64)||(7267898-7267961)
chr5 (4-119)||(15459198-15459313)
chr5 (30-121)||(24498069-24498160)
chr5 (1-64)||(34327690-34327753)
chr5 (46-120)||(1344832-1344906)
chr5 (1-63)||(30468286-30468348)
chr5 (1-119)||(43318066-43318184)
chr5 (90-119)||(18726565-18726594)
chr5 (90-119)||(32089987-32090016)
chr5 (90-119)||(42619289-42619318)
[»] scaffold0006 (1 HSPs)
scaffold0006 (30-120)||(38281-38370)
[»] chr7 (25 HSPs)
chr7 (1-120)||(1546286-1546405)
chr7 (31-119)||(1547666-1547754)
chr7 (1-119)||(46996708-46996826)
chr7 (1-69)||(6602385-6602453)
chr7 (1-101)||(37796187-37796287)
chr7 (1-124)||(8423287-8423410)
chr7 (1-64)||(34776921-34776984)
chr7 (1-120)||(35344296-35344415)
chr7 (30-117)||(46810707-46810794)
chr7 (30-124)||(4321033-4321127)
chr7 (13-121)||(7401891-7401999)
chr7 (4-72)||(24228418-24228486)
chr7 (1-64)||(37115532-37115595)
chr7 (30-72)||(78014-78056)
chr7 (1-119)||(27955370-27955488)
chr7 (1-63)||(33038803-33038865)
chr7 (2-64)||(45359391-45359453)
chr7 (30-119)||(8421416-8421505)
chr7 (30-107)||(22155847-22155924)
chr7 (30-107)||(22211762-22211839)
chr7 (90-119)||(30108565-30108594)
chr7 (1-70)||(39859235-39859304)
chr7 (90-119)||(46994660-46994689)
chr7 (30-70)||(27664479-27664519)
chr7 (87-119)||(34784067-34784099)
[»] chr4 (23 HSPs)
chr4 (1-119)||(10372712-10372830)
chr4 (1-119)||(10762581-10762699)
chr4 (1-109)||(41761752-41761860)
chr4 (30-121)||(10371055-10371146)
chr4 (2-113)||(13450987-13451097)
chr4 (1-121)||(44794766-44794886)
chr4 (1-72)||(35996110-35996181)
chr4 (1-119)||(44558499-44558617)
chr4 (1-79)||(49523164-49523242)
chr4 (1-70)||(41781588-41781657)
chr4 (90-121)||(2828473-2828504)
chr4 (1-64)||(51011981-51012044)
chr4 (30-120)||(230435-230525)
chr4 (30-96)||(2691396-2691462)
chr4 (1-119)||(39921494-39921612)
chr4 (1-63)||(47941867-47941929)
chr4 (90-119)||(39085214-39085243)
chr4 (1-118)||(39189383-39189500)
chr4 (90-119)||(42879275-42879304)
chr4 (90-119)||(44992808-44992837)
chr4 (4-109)||(48813797-48813902)
chr4 (87-119)||(13450363-13450395)
chr4 (90-122)||(43778386-43778418)
[»] chr6 (13 HSPs)
chr6 (1-119)||(29077328-29077446)
chr6 (1-108)||(14338481-14338588)
chr6 (1-72)||(32439097-32439168)
chr6 (2-108)||(3018439-3018545)
chr6 (1-119)||(29112300-29112418)
chr6 (1-64)||(20523421-20523484)
chr6 (43-120)||(30639610-30639687)
chr6 (1-72)||(7372964-7373035)
chr6 (1-72)||(13613588-13613659)
chr6 (1-119)||(4641355-4641473)
chr6 (1-119)||(17952048-17952166)
chr6 (90-124)||(35174386-35174420)
chr6 (87-119)||(24662480-24662512)
[»] scaffold0477 (1 HSPs)
scaffold0477 (1-119)||(6640-6758)
[»] scaffold1454 (1 HSPs)
scaffold1454 (1-54)||(1328-1381)
[»] scaffold0058 (2 HSPs)
scaffold0058 (1-70)||(3343-3412)
scaffold0058 (1-70)||(4515-4584)
[»] scaffold0564 (1 HSPs)
scaffold0564 (8-64)||(8317-8371)


Alignment Details
Target: chr1 (Bit Score: 99; Significance: 5e-49; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 51122023 - 51121905
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| || ||||||||||||||||||| |||    
T  51122023 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaatttgggaacgatgttggctgatgcttgcaaattcaagga 51121924  T
Q  101 cgaagttgatgattcactc 119  Q
    |||||||||||||||||||    
T  51121923 cgaagttgatgattcactc 51121905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 51123557 - 51123646
Alignment:
Q  30 aaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagttgatgattcactc 119  Q
    ||||||||||||||||||||||||| |||||||| | |||| ||||| | | ||| ||||||||||||||||||||||||||||||||||    
T  51123557 aaattcagggacgaaattgatatttcgcaaaatttgaggacaattttggttaatgattgcaaattcagggacgaagttgatgattcactc 51123646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 42134600 - 42134477
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||||||||| |||||||||||||  || |||||||||||| || ||||||||| ||| ||||  |||| |||||| || ||  | |  ||||||| |||    
T  42134600 cggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgacccgtaaaaattcaagga 42134501  T
Q  101 cgaagttgatgattcactctaaaa 124  Q
    |||| |||||| ||||||||||||    
T  42134500 cgaatttgatggttcactctaaaa 42134477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 47269462 - 47269585
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||||||||| |||||||||||||  || ||||||||||| |||||||| |||| | | ||||  ||||| | ||| || || || || |||||||||||    
T  47269462 cggagggacctttttgatggacgtttgacaaattcagggatgaaattgaaatttcgtataattgagggactaatttggccgacgcgtgaaaattcaggga 47269561  T
Q  101 cgaagttgatgattcactctaaaa 124  Q
    |||| |||||| ||||||| ||||    
T  47269562 cgaatttgatggttcactcaaaaa 47269585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 4855972 - 4856042
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacg 71  Q
    ||||||||||||||||||||||||  |  |||||||||||| || ||||||||| ||||||||| ||||||    
T  4855972 cggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 4856042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 6818684 - 6818792
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    ||||||||||||||||||||||||  |  |||||||||||| |||| |||||||||| |||| | ||||||| ||| || |||  ||  ||||||| |||    
T  6818684 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgctaaatccagggacgagtttggccgattttttaaaattcaagga 6818783  T
Q  101 cgaagttga 109  Q
    |||| ||||    
T  6818784 cgaatttga 6818792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 226
Target Start/End: Original strand, 24416082 - 24416165
Alignment:
Q  143 gtttatggatatttagaggatttctaagtgtatgggattcaatgcacatggatggagttgatatatgggtgatgaaagaataca 226  Q
    |||||||| |||||||||||||||| ||| |||||| ||  | |   | |||| ||||||||||||||||||||||||||||||    
T  24416082 gtttatgggtatttagaggatttctcagtctatgggttttgaggtttaaggatagagttgatatatgggtgatgaaagaataca 24416165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 15104559 - 15104477
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgat 83  Q
    |||| |||||||||||||||||||  |  |||||||||||| |||| ||||||| ||||||||| || |||| ||| ||||||    
T  15104559 cggaaggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggaacgaatttggctgat 15104477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 34778144 - 34778214
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacg 71  Q
    |||||||||||||||||||||| |  |  |||||||||||| || ||||||||| ||||||||| ||||||    
T  34778144 cggagggaccattttgatggacatctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 34778214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 35478176 - 35478087
Alignment:
Q  30 aaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagttgatgattcactc 119  Q
    |||||||||||  |||||||||||||||| ||||  ||||| | ||| || ||  | || ||||||||||| ||||||||||||||||||    
T  35478176 aaattcagggattaaattgatattttgcataattgagggactaatttggccgacccgtgaaaattcagggatgaagttgatgattcactc 35478087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 2869697 - 2869589
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    ||||||||||||||||||||||||  |  ||||| || ||| |||| ||||||| ||||||||| ||||||| |||  | |||  ||| ||||||| |||    
T  2869697 cggagggaccattttgatggacgtctgtaaaatttagagactaaatagatatttcgcaaaattcagggacgaatttgaccgatttttgaaaattcaagga 2869598  T
Q  101 cgaagttga 109  Q
    |||| ||||    
T  2869597 cgaatttga 2869589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 31238506 - 31238570
Alignment:
Q  6 ggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggac 70  Q
    |||||||||||||||||||  |  |||||||||||| |||| ||||||| ||||||||| |||||    
T  31238506 ggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggac 31238570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 226
Target Start/End: Original strand, 24310520 - 24310603
Alignment:
Q  143 gtttatggatatttagaggatttctaagtgtatgggattcaatgcacatggatggagttgatatatgggtgatgaaagaataca 226  Q
    |||||||| |||||||||||||||| ||| |||||| |   | | ||  ||||  |||||||||||||||||||||||||||||    
T  24310520 gtttatgggtatttagaggatttctcagtctatgggttatgagggacgaggataaagttgatatatgggtgatgaaagaataca 24310603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 25278374 - 25278445
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacga 72  Q
    ||||||||||||||||||||||||  |  ||||||| |||| |||| | ||||| ||||||||| |||||||    
T  25278374 cggagggaccattttgatggacgtatgtaaaattcaaggactaaataggtatttcgcaaaattcagggacga 25278445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 35479981 - 35480099
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||| ||||| |||||||||||||  || |||||||  ||  || ||||||||| ||| ||||  |||| || ||| |||||| | || ||||||| |||    
T  35479981 cggaaggacctttttgatggacgtctgacaaattcatagattaagttgatatttcgcataattgagggatgaatttggctgatccgtgaaaattcaagga 35480080  T
Q  101 cgaagttgatgattcactc 119  Q
    ||||||||||| |||||||    
T  35480081 cgaagttgatggttcactc 35480099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 119
Target Start/End: Original strand, 5784929 - 5784958
Alignment:
Q  90 aaattcagggacgaagttgatgattcactc 119  Q
    ||||||||||||||||||||||||||||||    
T  5784929 aaattcagggacgaagttgatgattcactc 5784958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 119
Target Start/End: Complemental strand, 11152574 - 11152545
Alignment:
Q  90 aaattcagggacgaagttgatgattcactc 119  Q
    ||||||||||||||||||||||||||||||    
T  11152574 aaattcagggacgaagttgatgattcactc 11152545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 27087393 - 27087332
Alignment:
Q  9 ccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggac 70  Q
    ||||||||||||||||  |  |||||||||||| |||| ||||||| ||||||||| |||||    
T  27087393 ccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggac 27087332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 119
Target Start/End: Original strand, 31803762 - 31803791
Alignment:
Q  90 aaattcagggacgaagttgatgattcactc 119  Q
    ||||||||||||||||||||||||||||||    
T  31803762 aaattcagggacgaagttgatgattcactc 31803791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 119
Target Start/End: Original strand, 44159356 - 44159385
Alignment:
Q  90 aaattcagggacgaagttgatgattcactc 119  Q
    ||||||||||||||||||||||||||||||    
T  44159356 aaattcagggacgaagttgatgattcactc 44159385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 119
Target Start/End: Complemental strand, 45379114 - 45379085
Alignment:
Q  90 aaattcagggacgaagttgatgattcactc 119  Q
    ||||||||||||||||||||||||||||||    
T  45379114 aaattcagggacgaagttgatgattcactc 45379085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 46583562 - 46583631
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggac 70  Q
    ||||||||| | ||||||||||||  |  |||||||||||| || ||||||||| ||||||||| |||||    
T  46583562 cggagggacaaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 46583631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 51896158 - 51896227
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggac 70  Q
    ||||||||| |||||||||||| |  |  |||||||||||| |||| ||||||| ||||||||| |||||    
T  51896158 cggagggactattttgatggacatctgtaaaattcagggactaaatagatatttcgcaaaattcagggac 51896227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 3e-47; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 17946212 - 17946097
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  17946212 cggagggaccattttgatggacatgagagaaattcagggacaaaattgatattttgcaaaatttaaggacgattttagctgatgcttgcaaattcaggga 17946113  T
Q  101 cgaagttgatgattca 116  Q
    ||||||||||||||||    
T  17946112 cgaagttgatgattca 17946097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 7744160 - 7744037
Alignment:
Q  2 ggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggac 101  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||  | |||||||||  || ||||||||||||||||||||    
T  7744160 ggagggaccattttgatggacatgagagaaattcagggacgaaattgatatttcgcaaaattttgagacgattttgcctaatgcttgcaaattcagggac 7744061  T
Q  102 gaagttgatgattcactctaaaat 125  Q
    ||||||||||||||||||| ||||    
T  7744060 gaagttgatgattcactcttaaat 7744037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 17948929 - 17949021
Alignment:
Q  30 aaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagttgatgattcactctaa 122  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  17948929 aaattcaaggacgaaattgatatttcgcaaaatttggggacgattttggctgatgcttgcaaattcatggacgaagttgatgattcactctaa 17949021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 7745274 - 7745363
Alignment:
Q  30 aaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagttgatgattcactc 119  Q
    ||||||| | ||||||||||||||| |||||||| |||||||||||| |||||||||| ||||||||  |||||| ||||||||||||||    
T  7745274 aaattcaagaacgaaattgatatttcgcaaaatttggggacgattttggctgatgcttacaaattcaatgacgaaattgatgattcactc 7745363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 39664774 - 39664882
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    ||||||||||||||||||||||||  |  |||||||||||| |||| ||||||| | ||||||||||||||| ||| || |||  ||  ||||||| |||    
T  39664774 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgtaaaattcggggacgaatttggccgattttttaaaattcaagga 39664873  T
Q  101 cgaagttga 109  Q
    |||| ||||    
T  39664874 cgaatttga 39664882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 16763194 - 16763123
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacga 72  Q
    ||||||||||||||||||||||||  |  |||||||||||| |||| ||||||| ||||||||| |||||||    
T  16763194 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacga 16763123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 15372617 - 15372499
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||||||||| |||||||||||||  || |||||||||||  |||||||||||||||| ||||  ||| ||| ||| || ||  | || |||||||||||    
T  15372617 cggagggacctttttgatggacgtctgataaattcagggattaaattgatattttgcataattgaggggcgaatttggccgacccgtgaaaattcaggga 15372518  T
Q  101 cgaagttgatgattcactc 119  Q
    | || |||||| |||||||    
T  15372517 ctaaattgatggttcactc 15372499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 40560341 - 40560259
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgat 83  Q
    ||||||||| ||||||||||||||  |  |||||||||||| |||| ||||||| ||||||||| ||||||| ||| ||||||    
T  40560341 cggagggactattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggctgat 40560259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 41144 - 41233
Alignment:
Q  30 aaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagttgatgattcactc 119  Q
    |||||||||||  |||||||||||| ||| ||||  ||||||| ||| || ||  | || ||||||||||||||||||||||||||||||    
T  41144 aaattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtgaaaattcagggacgaagttgatgattcactc 41233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16377223 - 16377292
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggac 70  Q
    ||||||||||||||||||||||||  |  ||||||| |||| |||| ||||||||||||||||| |||||    
T  16377223 cggagggaccattttgatggacgtatgtaaaattcaaggactaaatagatattttgcaaaattcagggac 16377292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 14389110 - 14389218
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||||||||||||||||||||| |  |  |||||||||||| |||| ||||||| ||||||||| ||||||| ||| || |||  ||| |||||||  ||    
T  14389110 cggagggaccattttgatggacatttggaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaatga 14389209  T
Q  101 cgaagttga 109  Q
    |||| ||||    
T  14389210 cgaatttga 14389218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 11021622 - 11021531
Alignment:
Q  30 aaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagttgatgattcactcta 121  Q
    |||||||||||  |||||||||||| ||| ||||  |||||||  || || ||  | || ||||||||||||||||||||||||||||||||    
T  11021622 aaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattcactcta 11021531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 11315341 - 11315460
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    ||||||||||||||||||||||||  || ||||||||| || |  ||||||||| |  ||||| ||| |||| ||| || ||| | |  ||||| | |||    
T  11315341 cggagggaccattttgatggacgtctgacaaattcaggaactattttgatatttcgttaaattagggaacgaatttggccgattcataaaaatttaagga 11315440  T
Q  101 cgaagttgatgattcactct 120  Q
    ||||||||||||||||||||    
T  11315441 cgaagttgatgattcactct 11315460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 29909666 - 29909785
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||||||||| |||||||||||||  || ||||| |||||| |||||||||||| ||| ||||  ||||| |  || || || || || |||||||||||    
T  29909666 cggagggacctttttgatggacgtctgacaaattaagggactaaattgatatttcgcataattgagggacaaagttggccgacgcgtgaaaattcaggga 29909765  T
Q  101 cgaagttgatgattcactct 120  Q
    | || |||||| ||||||||    
T  29909766 caaatttgatggttcactct 29909785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 42519232 - 42519291
Alignment:
Q  2 ggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaa 61  Q
    |||||||||||||||||||||||  |  |||||||||||| |||| ||||||||||||||    
T  42519232 ggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaa 42519291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 122
Target Start/End: Complemental strand, 33222 - 33190
Alignment:
Q  90 aaattcagggacgaagttgatgattcactctaa 122  Q
    |||||||||||||||||||||||||||||||||    
T  33222 aaattcagggacgaagttgatgattcactctaa 33190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 17696324 - 17696216
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    ||||| |||||||||||| |||||  |  |||||||||||| |||| |||||||| |||||||| |||| || ||| || |||  ||| ||||||| |||    
T  17696324 cggagtgaccattttgattgacgtttgtaaaattcagggactaaatagatattttccaaaattcagggatgaatttggccgatttttgaaaattcaagga 17696225  T
Q  101 cgaagttga 109  Q
    |||| ||||    
T  17696224 cgaatttga 17696216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 39455287 - 39455224
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattc 64  Q
    ||||| ||||||||||||||||||  |  ||||||| |||| |||| |||||||||||||||||    
T  39455287 cggagagaccattttgatggacgtctgtaaaattcatggactaaatagatattttgcaaaattc 39455224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 41706657 - 41706586
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacga 72  Q
    |||||||||| |||||||||||||  || |||||||||||  |||||||||||| ||| ||||  |||||||    
T  41706657 cggagggacctttttgatggacgttcgataaattcagggattaaattgatatttcgcataattgagggacga 41706586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 121
Target Start/End: Original strand, 42880873 - 42880904
Alignment:
Q  90 aaattcagggacgaagttgatgattcactcta 121  Q
    ||||||||||||||||||||||||||||||||    
T  42880873 aaattcagggacgaagttgatgattcactcta 42880904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 44709771 - 44709834
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattc 64  Q
    ||||||||||||||||||||||||  |  |||||||||||| |||| | ||||| |||||||||    
T  44709771 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagttatttcgcaaaattc 44709834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 2767050 - 2766989
Alignment:
Q  3 gagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattc 64  Q
    |||||||||||||||| |||||  |  |||||||||||| |||| ||||||| |||||||||    
T  2767050 gagggaccattttgatagacgtctgtaaaattcagggactaaatagatatttcgcaaaattc 2766989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 19908272 - 19908341
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggac 70  Q
    ||||||||||||||||| ||||||  |  ||||||| |||| |||| ||||||| ||||||||| |||||    
T  19908272 cggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggac 19908341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 25619777 - 25619716
Alignment:
Q  2 ggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaatt 63  Q
    ||||||||| ||||||||||| |  || |||||||||||| || ||||||||||||| ||||    
T  25619777 ggagggacctttttgatggacatatgacaaattcagggactaagttgatattttgcataatt 25619716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 119
Target Start/End: Original strand, 28248237 - 28248266
Alignment:
Q  90 aaattcagggacgaagttgatgattcactc 119  Q
    ||||||||||||||||||||||||||||||    
T  28248237 aaattcagggacgaagttgatgattcactc 28248266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 119
Target Start/End: Original strand, 363739 - 363771
Alignment:
Q  87 tgcaaattcagggacgaagttgatgattcactc 119  Q
    |||||||||| ||||||||||||||||||||||    
T  363739 tgcaaattcaaggacgaagttgatgattcactc 363771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 120
Target Start/End: Complemental strand, 37417388 - 37417272
Alignment:
Q  4 agggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacga 103  Q
    ||||||| |||||||||||||  || |||||||||||| || ||||||||| ||| ||||  |||| || ||| || ||  | || ||||||| ||||||    
T  37417388 agggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccatgaaaattcaaggacga 37417289  T
Q  104 agttgatgattcactct 120  Q
    |  ||||| ||||||||    
T  37417288 atatgatggttcactct 37417272  T

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Target: chr8 (Bit Score: 89; Significance: 5e-43; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 5075479 - 5075367
Alignment:
Q  8 accattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagtt 107  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||| |||||||| |||||||||||| ||||||||||||||||||| ||||||||||    
T  5075479 accattttgatggacgtgagagaaattcaaggacaaaattgatatttcgcaaaatttggggacgattttggctgatgcttgcaaattcaaggacgaagtt 5075380  T
Q  108 gatgattcactct 120  Q
    |||||||||||||    
T  5075379 gatgattcactct 5075367  T

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Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 44620671 - 44620762
Alignment:
Q  30 aaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagttgatgattcactcta 121  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||  | |||||||||||||||||||||||||||||||||||||||||    
T  44620671 aaattcagggacgaaattgatattttgcaaaatttggggacgattttgaccgatgcttgcaaattcagggacgaagttgatgattcactcta 44620762  T

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Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 9186647 - 9186736
Alignment:
Q  30 aaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagttgatgattcactc 119  Q
    ||||| |||||| || ||||||||| ||| |||| |||||||||||| |||||| |||| ||||||| ||||| ||||||||||||||||    
T  9186647 aaatttagggactaatttgatatttcgcataatttggggacgattttggctgatccttgtaaattcaaggacggagttgatgattcactc 9186736  T

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Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 13108362 - 13108470
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    ||||||||||||||||||||||||  |  |||||||||||| || ||||||||| ||||||||| ||||||  |||||| |||  ||  ||||||| |||    
T  13108362 cggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatttagccgattttttaaaattcaagga 13108461  T
Q  101 cgaagttga 109  Q
    |||| ||||    
T  13108462 cgaatttga 13108470  T

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Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 13282596 - 13282488
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    ||||||||||||||||||||||||  |  |||||||||||| |||| ||||||| ||||||||| ||||||| ||| || |||  ||  ||||||| |||    
T  13282596 cggagggaccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagga 13282497  T
Q  101 cgaagttga 109  Q
    |||| ||||    
T  13282496 cgaatttga 13282488  T

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Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 8609813 - 8609884
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacga 72  Q
    ||||||||||||||||||||||||  |  |||||||||||| |||| ||||||| ||||||||| |||||||    
T  8609813 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacga 8609884  T

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Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 52 - 119
Target Start/End: Original strand, 9186916 - 9186983
Alignment:
Q  52 ttttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagttgatgattcactc 119  Q
    ||||||| |||| |||||||||||| |||||| |||| ||||||| ||||| ||||||||||||||||    
T  9186916 ttttgcataatttggggacgattttggctgatccttgtaaattcaaggacggagttgatgattcactc 9186983  T

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Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 9184501 - 9184383
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||||||||||||| ||| |||||  || |||||||||||| || ||||||||| ||  | || || ||||| ||| || ||| | |||||||||| |||    
T  9184501 cggagggaccatttcgatcgacgtctgacaaattcagggactaatttgatatttcgcgtagttgggcgacgaatttggccgattcgtgcaaattcaagga 9184402  T
Q  101 cgaagttgatgattcactc 119  Q
    |||| ||||||||||||||    
T  9184401 cgaaattgatgattcactc 9184383  T

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Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 26242340 - 26242448
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    ||||||||||||||||||||||||  |  |||||||| ||| |||| ||||||| ||||||||  ||||||| ||| ||||||  ||| ||||||| | |    
T  26242340 cggagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaatttagggacgaatttggctgatttttgaaaattcaagaa 26242439  T
Q  101 cgaagttga 109  Q
    |||| ||||    
T  26242440 cgaaattga 26242448  T

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Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 41825670 - 41825778
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    ||||| ||||||||||||||||||  |  |||||||||||| |||| ||||||| |||||||||  |||||| ||||  ||||  ||| ||||||| |||    
T  41825670 cggagtgaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttatttgatttttgaaaattcaagga 41825769  T
Q  101 cgaagttga 109  Q
    |||| ||||    
T  41825770 cgaatttga 41825778  T

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Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 9673191 - 9673270
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagct 80  Q
    ||||||||||||||||||||||||  |  |||||||||||  |||| |||||||  |||||||| ||||||| |||||||    
T  9673191 cggagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttcacaaaattcagggacgaatttagct 9673270  T

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Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 31201149 - 31201272
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||||||||| |||||||||||||  || |||||||||||  |||||||||||| ||| ||||   |||||| ||| || ||  | || |||||||||||    
T  31201149 cggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgatggacgaatttggccgacccgtgaaaattcaggga 31201248  T
Q  101 cgaagttgatgattcactctaaaa 124  Q
    | || |||||| ||||||| ||||    
T  31201249 ctaaattgatggttcactcgaaaa 31201272  T

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Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 38547345 - 38547283
Alignment:
Q  2 ggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattc 64  Q
    |||||||||||||||||||||||  |  |||||||||||| || ||||||||| |||||||||    
T  38547345 ggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattc 38547283  T

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Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 23811583 - 23811656
Alignment:
Q  46 ttgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagttgatgattcactc 119  Q
    ||||||||||| |||||| |||||||| ||| || ||| | ||| |||||||||||||||||||| ||| ||||    
T  23811583 ttgatattttgtaaaattgggggacgaatttggccgatccgtgcgaattcagggacgaagttgataatttactc 23811656  T

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Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 13486127 - 13486186
Alignment:
Q  3 gagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaat 62  Q
    ||||||||||||||||||||||  |  |||||||||||| |||| ||||||| |||||||    
T  13486127 gagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaat 13486186  T

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Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 22272453 - 22272383
Alignment:
Q  2 ggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacga 72  Q
    |||||||| ||||||||||||||  |  |||||||||||| |||| ||||||  ||||||||| |||||||    
T  22272453 ggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcagggacga 22272383  T

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Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 27692837 - 27692879
Alignment:
Q  30 aaattcagggacgaaattgatattttgcaaaattcggggacga 72  Q
    |||||||||||| || ||||||||||||||||||| |||||||    
T  27692837 aaattcagggactaatttgatattttgcaaaattcagggacga 27692879  T

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Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 119
Target Start/End: Complemental strand, 33748361 - 33748332
Alignment:
Q  90 aaattcagggacgaagttgatgattcactc 119  Q
    ||||||||||||||||||||||||||||||    
T  33748361 aaattcagggacgaagttgatgattcactc 33748332  T

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Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 41042610 - 41042679
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggac 70  Q
    |||||||||||||||||||||||   |  |||||||||||| |||| |||||||  |||||||| |||||    
T  41042610 cggagggaccattttgatggacgcctgtaaaattcagggactaaatagatatttcacaaaattcagggac 41042679  T

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Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 42941892 - 42941784
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    ||||||||| |||||||||||| |  |  |||||||||||| ||||  ||||||  |||||||| ||||||| ||| ||||||  ||  ||||||| |||    
T  42941892 cggagggactattttgatggacatctgtaaaattcagggactaaataaatatttctcaaaattcagggacgaatttggctgattttttaaaattcaagga 42941793  T
Q  101 cgaagttga 109  Q
    |||| ||||    
T  42941792 cgaatttga 42941784  T

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Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 33051467 - 33051557
Alignment:
Q  30 aaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagttgatgattcactct 120  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| | ||||||||||||||| |||||||||||||||||||||||||    
T  33051467 aaattcagggacgaaattgatattttgcaaaatttagggacgattttggttgatgcttgcaaatttagggacgaagttgatgattcactct 33051557  T

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Target: chr3; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 49494565 - 49494477
Alignment:
Q  30 aaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagttgatgattcact 118  Q
    ||||||||||| ||||||||||||| | |||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  49494565 aaattcagggatgaaattgatatttcgtaaaatttggggacgattttgattgatgcttgcaaattcagggacgaagttgatgattcact 49494477  T

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Target: chr3; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 41021009 - 41021129
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||||||||| |||||||||||||  || ||||||||||| |||||||| |||| ||| ||||  ||||| | ||| || || || || |||||||||||    
T  41021009 cggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtgaaaattcaggga 41021108  T
Q  101 cgaagttgatgattcactcta 121  Q
    |||| |||||| |||||||||    
T  41021109 cgaatttgatggttcactcta 41021129  T

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Target: chr3; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 51684728 - 51684620
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    ||||||||||||||||||||||||  |  ||||||| |||| |||| ||||||||||||||||| |||| || ||| ||||||  ||| ||||||| |||    
T  51684728 cggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatattttgcaaaattcagggatgaatttggctgatttttgaaaattcaagga 51684629  T
Q  101 cgaagttga 109  Q
    |||| ||||    
T  51684628 cgaatttga 51684620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 42279625 - 42279517
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||||||||||||||||| |||||  |  |||||||||||| |||| ||||||||||||||||| | ||||| || |||||||  ||| |||||||  ||    
T  42279625 cggagggaccattttgatagacgtctgtaaaattcagggactaaatagatattttgcaaaattctgagacgaattgagctgatttttgaaaattcaatga 42279526  T
Q  101 cgaagttga 109  Q
    |||| ||||    
T  42279525 cgaatttga 42279517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 53190785 - 53190893
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    ||||||||||||||||||||||||  |  |||||||||||| |||| ||||||| ||||||||| ||||||| ||| || |||  ||  ||||||| |||    
T  53190785 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagga 53190884  T
Q  101 cgaagttga 109  Q
    |||| ||||    
T  53190885 cgaatttga 53190893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 33047616 - 33047535
Alignment:
Q  16 gatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcag 97  Q
    |||||||||||||||| |||| ||||||||||||||||| |||||||| | |||| |||||  |   |||||||||||||||    
T  33047616 gatggacgtgagagaatttcaaggacgaaattgatatttcgcaaaatttgaggacaattttgacccttgcttgcaaattcag 33047535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 23774268 - 23774152
Alignment:
Q  3 gagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacg 102  Q
    |||||||  |||||||||||||  || |||||||||||| |||||||||||| ||| ||||  ||||||| ||| || ||  | || ||||||| |||||    
T  23774268 gagggacttttttgatggacgtctgacaaattcagggactaaattgatatttcgcataattgagggacgaatttggccgactcgtgaaaattcaaggacg 23774169  T
Q  103 aagttgatgattcactc 119  Q
    || |||||| |||||||    
T  23774168 aatttgatggttcactc 23774152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 21348841 - 21348778
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattc 64  Q
    ||||||||||||||||||||||||  |  |||||||||||| |||| ||||||| |||||||||    
T  21348841 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattc 21348778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 35905738 - 35905809
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacga 72  Q
    ||||||||||||||||||| ||||  |  |||||||||||| |||| ||||||| ||||||||| |||||||    
T  35905738 cggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacga 35905809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 46112605 - 46112542
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattc 64  Q
    ||||||||||||||||||||||||  |  ||||||| |||| |||| |||||||||||||||||    
T  46112605 cggagggaccattttgatggacgtctgtaaaattcatggactaaatagatattttgcaaaattc 46112542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 23888778 - 23888896
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||||||||| |||||||||||||  || |||||||||||| ||  |||||||| ||| ||||  |||||||  || || || |  || |||||||||||    
T  23888778 cggagggacctttttgatggacgtttgacaaattcagggactaagctgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 23888877  T
Q  101 cgaagttgatgattcactc 119  Q
    |||| |||||| |||||||    
T  23888878 cgaatttgatggttcactc 23888896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 17515426 - 17515365
Alignment:
Q  3 gagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattc 64  Q
    ||||||||||||||||||||||  |  |||||||||||| |||| ||||||| |||||||||    
T  17515426 gagggaccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattc 17515365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 40963457 - 40963494
Alignment:
Q  87 tgcaaattcagggacgaagttgatgattcactctaaaa 124  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  40963457 tgcaaattcagggacgaagttgatgattcactccaaaa 40963494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 48635375 - 48635464
Alignment:
Q  30 aaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagttgatgattcactc 119  Q
    |||||||||||  |||||||||||| ||| ||||  ||||||| |||  | ||| | || ||||||||||||||| ||||||||||||||    
T  48635375 aaattcagggattaaattgatatttcgcataattaagggacgaatttgaccgatccgtgaaaattcagggacgaaattgatgattcactc 48635464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 2226178 - 2226286
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||||||| |||||||||| ||||  |  |||||||||||| |||| ||||||| ||||||||| ||||||| ||| || |||  ||  ||||||| |||    
T  2226178 cggagggaacattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagga 2226277  T
Q  101 cgaagttga 109  Q
    |||| ||||    
T  2226278 cgaatttga 2226286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 27899107 - 27899215
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    ||||||||||||||| ||||||||  |  |||||||||||| |||| ||||||| |||||||||  |||||| ||| || |||  ||  ||||||| |||    
T  27899107 cggagggaccatttttatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccgattttttaaaattcaagga 27899206  T
Q  101 cgaagttga 109  Q
    |||| ||||    
T  27899207 cgaatttga 27899215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 54898555 - 54898484
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacga 72  Q
    ||||| ||||||||||||| ||||  |  |||||||||||| |||| ||||||| ||||||||| |||||||    
T  54898555 cggagagaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacga 54898484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 2977335 - 2977453
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||| ||||| |||||||||||||  || ||||| ||||||  ||||||||||| ||| ||||  |||| || ||| || ||| | |  ||||||| |||    
T  2977335 cggatggacctttttgatggacgtatgacaaatttagggactgaattgatatttcgcataattaagggatgaatttggccgattcgtaaaaattcaagga 2977434  T
Q  101 cgaagttgatgattcactc 119  Q
    |||| ||||||||||||||    
T  2977435 cgaatttgatgattcactc 2977453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 23887287 - 23887197
Alignment:
Q  30 aaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagttgatgattcactct 120  Q
    |||||||||||  |||||||||||| ||| ||||  |||||||  ||||| ||  | |  ||||||| |||||||||||||||||||||||    
T  23887287 aaattcagggattaaattgatatttcgcataattgagggacgaagttagccgacccataaaaattcaaggacgaagttgatgattcactct 23887197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 41977868 - 41977798
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacg 71  Q
    ||||||||||||||||| ||||||  |  |||||||||||| || ||||||||| || |||||| ||||||    
T  41977868 cggagggaccattttgacggacgtctgtaaaattcagggactaatttgatatttcgccaaattcagggacg 41977798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 48633995 - 48633933
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaatt 63  Q
    |||||||||| |||||||||||||  || |||||||||||| || ||||||||| ||| ||||    
T  48633995 cggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataatt 48633933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 119
Target Start/End: Original strand, 49496002 - 49496040
Alignment:
Q  81 gatgcttgcaaattcagggacgaagttgatgattcactc 119  Q
    |||| ||||||||||| ||||||||||||||||||||||    
T  49496002 gatgtttgcaaattcaaggacgaagttgatgattcactc 49496040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 30599944 - 30600013
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggac 70  Q
    |||||||||||||||||| |||||     |||||||||||| |||| ||||||| ||||||||| |||||    
T  30599944 cggagggaccattttgatcgacgtctctaaaattcagggactaaatagatatttcgcaaaattcagggac 30600013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 119
Target Start/End: Complemental strand, 33111870 - 33111841
Alignment:
Q  90 aaattcagggacgaagttgatgattcactc 119  Q
    ||||||||||||||||||||||||||||||    
T  33111870 aaattcagggacgaagttgatgattcactc 33111841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 119
Target Start/End: Complemental strand, 40508522 - 40508493
Alignment:
Q  90 aaattcagggacgaagttgatgattcactc 119  Q
    ||||||||||||||||||||||||||||||    
T  40508522 aaattcagggacgaagttgatgattcactc 40508493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 119
Target Start/End: Complemental strand, 26447755 - 26447723
Alignment:
Q  87 tgcaaattcagggacgaagttgatgattcactc 119  Q
    |||||||| ||||||||||||||||||||||||    
T  26447755 tgcaaatttagggacgaagttgatgattcactc 26447723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 46197835 - 46197775
Alignment:
Q  4 agggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattc 64  Q
    |||||||||||| ||||||||  |  ||||||||| || |||| |||||||||||||||||    
T  46197835 agggaccattttaatggacgtctgtaaaattcaggaactaaatagatattttgcaaaattc 46197775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 6e-30; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 27349274 - 27349156
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||||||||||||||||| ||||||||||||||||| |||| |||| ||||||| |||||||| | || ||||||| | ||||| |||||| |||| |||    
T  27349274 cggagggaccattttgatagacgtgagagaaattcaaggacaaaatcgatatttcgcaaaatttgaggtcgattttggttgatgtttgcaacttcaagga 27349175  T
Q  101 cgaagttgatgattcactc 119  Q
    |||||||||||||||||||    
T  27349174 cgaagttgatgattcactc 27349156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 27350544 - 27350625
Alignment:
Q  38 ggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagttgatgattcactc 119  Q
    |||||||||||||||||  ||||||| |||  ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27350544 ggacgaaattgatatttcacaaaatttgggatcgattttggctgatgcttgcaaattcagggacgaagttgatgattcactc 27350625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 40330517 - 40330606
Alignment:
Q  30 aaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagttgatgattcactc 119  Q
    |||||||||||  |||||||||||| ||| ||||  ||||||||||| || ||  | || ||||||||||||||||||||||||||||||    
T  40330517 aaattcagggattaaattgatatttcgcataattgagggacgattttggccgacccgtgaaaattcagggacgaagttgatgattcactc 40330606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 17574436 - 17574328
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    ||||||||||||||||||||||||  |  |||||||||||| |||| ||||||| ||||||||| ||||||| ||| || |||  ||  ||||||| |||    
T  17574436 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagga 17574337  T
Q  101 cgaagttga 109  Q
    |||| ||||    
T  17574336 cgaatttga 17574328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 18625014 - 18625122
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||| |||||||||||||||||| | |  |||||||||||| |||| |||||||  |||||||| ||||||| ||||||||||   || ||||||| |||    
T  18625014 cggaaggaccattttgatggacgagtgtaaaattcagggactaaatagatatttcacaaaattcagggacgaatttagctgatcagtgaaaattcaagga 18625113  T
Q  101 cgaagttga 109  Q
    |||| ||||    
T  18625114 cgaatttga 18625122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 36057619 - 36057727
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    ||||||||||||||||||||||||  |  |||||||||| | |||| ||||||| ||||||||| ||||||| ||| || |||  ||| ||||||| |||    
T  36057619 cggagggaccattttgatggacgtctgtaaaattcagggtctaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaagga 36057718  T
Q  101 cgaagttga 109  Q
    |||| ||||    
T  36057719 cgaatttga 36057727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 18728608 - 18728728
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||||||||| |||||||||||||  || |||||||||||| || ||||||||| ||| ||||  |||||||  || || ||    || |||||||||||    
T  18728608 cggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattaagggacgaagttggccgacaagtgaaaattcaggga 18728707  T
Q  101 cgaagttgatgattcactcta 121  Q
    |||| |||||| |||||||||    
T  18728708 cgaatttgatggttcactcta 18728728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 32835965 - 32835876
Alignment:
Q  30 aaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagttgatgattcactc 119  Q
    |||||||||||  |||||||||||| ||| ||||  ||||||| |||  | ||  | || ||||||||||||||||||||||||||||||    
T  32835965 aaattcagggattaaattgatatttcgcataattaagggacgaatttgaccgacccgtgaaaattcagggacgaagttgatgattcactc 32835876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 35395451 - 35395331
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||||||||| |||||||||||||   | ||||||||| || |||||||||||| ||| ||||  |||||||  || || || |  || |||||||||||    
T  35395451 cggagggacctttttgatggacgtctaacaaattcaggaactaaattgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 35395352  T
Q  101 cgaagttgatgattcactcta 121  Q
     ||| |||||| |||||||||    
T  35395351 tgaatttgatggttcactcta 35395331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 7267961 - 7267898
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattc 64  Q
    |||||||| |||||||||||||||  |  |||||||||||| |||| ||||||| |||||||||    
T  7267961 cggagggatcattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattc 7267898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 15459198 - 15459313
Alignment:
Q  4 agggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacga 103  Q
    |||||||||||||||||||||  |  ||||||||| || |||| |  |||| |  ||||| ||||||||||||  | ||| |||||||||||| ||||||    
T  15459198 agggaccattttgatggacgtctgttaaattcaggaacaaaatagccatttcgataaattgggggacgattttgtccgatccttgcaaattcaaggacga 15459297  T
Q  104 agttgatgattcactc 119  Q
    | ||||  ||||||||    
T  15459298 atttgactattcactc 15459313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 24498069 - 24498160
Alignment:
Q  30 aaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagttgatgattcactcta 121  Q
    |||||||||||| || ||||| | | ||| ||||  |||| ||||||  | ||| |||||||||||| |||||||||| |||||||||||||    
T  24498069 aaattcagggactaatttgatttatcgcataattgagggatgattttgaccgatccttgcaaattcacggacgaagttaatgattcactcta 24498160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 34327753 - 34327690
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattc 64  Q
    ||||| ||||||||||||||||||  |  |||||||||||| |||| ||||||| |||||||||    
T  34327753 cggagagaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattc 34327690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 1344832 - 1344906
Alignment:
Q  46 ttgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagttgatgattcactct 120  Q
    ||||||||| | |||||| |||||| | |||  | ||| | |||||||||||||||||| |||||||||||||||    
T  1344832 ttgatatttcgtaaaattgggggacaaatttgaccgattcatgcaaattcagggacgaaattgatgattcactct 1344906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 30468286 - 30468348
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaatt 63  Q
    ||||||||||||||||||||||||  |  ||||||| |||| |||| ||||||| ||||||||    
T  30468286 cggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaatt 30468348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 43318066 - 43318184
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||||||||| |||| ||||||||  || |||||||||||| || ||||||||| ||| ||||  |||| |||||| || ||  | |  ||||||| |||    
T  43318066 cggagggaccttttttatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgacccataaaaattcaagga 43318165  T
Q  101 cgaagttgatgattcactc 119  Q
    |||| |||||| |||||||    
T  43318166 cgaatttgatggttcactc 43318184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 119
Target Start/End: Complemental strand, 18726594 - 18726565
Alignment:
Q  90 aaattcagggacgaagttgatgattcactc 119  Q
    ||||||||||||||||||||||||||||||    
T  18726594 aaattcagggacgaagttgatgattcactc 18726565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 119
Target Start/End: Original strand, 32089987 - 32090016
Alignment:
Q  90 aaattcagggacgaagttgatgattcactc 119  Q
    ||||||||||||||||||||||||||||||    
T  32089987 aaattcagggacgaagttgatgattcactc 32090016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 119
Target Start/End: Complemental strand, 42619318 - 42619289
Alignment:
Q  90 aaattcagggacgaagttgatgattcactc 119  Q
    ||||||||||||||||||||||||||||||    
T  42619318 aaattcagggacgaagttgatgattcactc 42619289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 38281 - 38370
Alignment:
Q  30 aaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagttgatgattcactct 120  Q
    ||||| ||||||||||| ||||||| |||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  38281 aaattgagggacgaaat-gatatttcgcaaaatttggggacgattttggttgatgcttgcaaattcagggacgaagttgatgattcactct 38370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 2e-23; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 1546405 - 1546286
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| |  |||||||||  ||||| |||  |||||||  ||    
T  1546405 cggagggaccattttgatggacgtgagagaaattcaaggacgcaattgatatttcgcaaaatttgaagacgattttgactgatacttataaattcaaaga 1546306  T
Q  101 cgaagttgatgattcactct 120  Q
    ||||||  | ||||||||||    
T  1546305 cgaagtatacgattcactct 1546286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 31 - 119
Target Start/End: Original strand, 1547666 - 1547754
Alignment:
Q  31 aattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagttgatgattcactc 119  Q
    |||| |||||| ||||||||||||||||||||| |  |||||||||  ||||| |||||||||||| ||||||||||||||||||||||    
T  1547666 aatttagggacaaaattgatattttgcaaaatttgaagacgattttgactgatacttgcaaattcatggacgaagttgatgattcactc 1547754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 46996708 - 46996826
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||||||||| |||||||||||||  || |||||||| ||| || ||||||||| ||| ||||  |||||||  || || || || || |||||||||||    
T  46996708 cggagggacctttttgatggacgtctgacaaattcagtgactaagttgatatttcgcataattgagggacgaagttggccgacgcgtgaaaattcaggga 46996807  T
Q  101 cgaagttgatgattcactc 119  Q
    |||| |||||| |||||||    
T  46996808 cgaatttgatggttcactc 46996826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 6602453 - 6602385
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcgggga 69  Q
    ||||||||||||||||||||||||  |  |||||||||||| |||| ||||||| ||||||||| ||||    
T  6602453 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggga 6602385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 37796187 - 37796287
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    ||||||||| ||||||||||||||  |  |||||||||||| |||| ||||||| |||||||| | |||||| ||| ||||||  ||| ||||||| |||    
T  37796187 cggagggactattttgatggacgtccgtaaaattcagggactaaatagatatttcgcaaaatttgaggacgaatttggctgatttttgaaaattcaagga 37796286  T
Q  101 c 101  Q
    |    
T  37796287 c 37796287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 8423287 - 8423410
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||||||||| ||||||| |||||  || |||||||||||  |||||||||||| ||| ||||  ||||| | ||| |||||  | || |||||||||||    
T  8423287 cggagggacctttttgattgacgtctgataaattcagggattaaattgatatttcgcataattgagggacaaatttggctgacccgtgaaaattcaggga 8423386  T
Q  101 cgaagttgatgattcactctaaaa 124  Q
    | || |||||| ||||||| ||||    
T  8423387 ctaaattgatggttcactcgaaaa 8423410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 34776921 - 34776984
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattc 64  Q
    ||||||||||||||||||||||||  |  |||||||||||| |||| ||||||| |||||||||    
T  34776921 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattc 34776984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 35344296 - 35344415
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||||||||| |||||||||||||   | |||||||||||  |||||||||||| ||| ||||  ||||||| ||| |||||  | || |||||| ||||    
T  35344296 cggagggacctttttgatggacgtcttataaattcagggattaaattgatatttcgcataattgagggacgaatttggctgacccgtgaaaattcgggga 35344395  T
Q  101 cgaagttgatgattcactct 120  Q
    | || |||||| ||||||||    
T  35344396 ctaaattgatggttcactct 35344415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 46810794 - 46810707
Alignment:
Q  30 aaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagttgatgattcac 117  Q
    |||||||||||  |||||||||||| ||| ||||  ||||| | ||| || ||| | || ||||||||||||||||||||||||||||    
T  46810794 aaattcagggattaaattgatatttcgcataattgagggactaatttggccgatccgtgaaaattcagggacgaagttgatgattcac 46810707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 4321127 - 4321033
Alignment:
Q  30 aaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagttgatgattcactctaaaa 124  Q
    |||||||||||  |||||||||||| ||| ||||  |||||||  || || ||  | || |||||||||||||||||||||||||||||| ||||    
T  4321127 aaattcagggattaaattgatatttcgcataattaagggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattcactcaaaaa 4321033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 7401999 - 7401891
Alignment:
Q  13 tttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagttgatga 112  Q
    ||||||||||||  |  ||||||||||||||| ||||||||| |  ||||| | |||||||| | | ||||   |||||||||| ||||||| |||||||    
T  7401999 tttgatggacgtctgttaaattcagggacgaatttgatatttcgataaattggaggacgattatggttgatctgtgcaaattcaaggacgaatttgatga 7401900  T
Q  113 ttcactcta 121  Q
    || ||||||    
T  7401899 tttactcta 7401891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 24228418 - 24228486
Alignment:
Q  4 agggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacga 72  Q
    |||||||||||||||||||||  |  |||||||| ||| |||| ||||||| ||||||||| |||||||    
T  24228418 agggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattcagggacga 24228486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 37115532 - 37115595
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattc 64  Q
    ||||||||| ||||||||||||||  |  ||||||||| || |||| |||||||||||||||||    
T  37115532 cggagggactattttgatggacgtctgtaaaattcaggtactaaatagatattttgcaaaattc 37115595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 78014 - 78056
Alignment:
Q  30 aaattcagggacgaaattgatattttgcaaaattcggggacga 72  Q
    |||||||||||| || ||||||||||||||||||| |||||||    
T  78014 aaattcagggacaaatttgatattttgcaaaattcagggacga 78056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 27955488 - 27955370
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    ||||||||||  ||||||||||||  || ||||||||  |  || ||||||||| | ||||||  |||| || |||||||||| | |  ||||||| |||    
T  27955488 cggagggacctctttgatggacgtctgacaaattcagaaattaagttgatatttcgtaaaattgagggatgaatttagctgatccgtaaaaattcaagga 27955389  T
Q  101 cgaagttgatgattcactc 119  Q
    |||| ||||||||||||||    
T  27955388 cgaatttgatgattcactc 27955370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 33038803 - 33038865
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaatt 63  Q
    |||||||||| |||||||||||||  || |||||||||||| || ||||||||| ||| ||||    
T  33038803 cggagggacctttttgatggacgtctgaaaaattcagggactaagttgatatttcgcataatt 33038865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 45359453 - 45359391
Alignment:
Q  2 ggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattc 64  Q
    |||||||||||||||||||||||  |  ||||||| |||| |||| ||||||| |||||||||    
T  45359453 ggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattc 45359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 8421505 - 8421416
Alignment:
Q  30 aaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagttgatgattcactc 119  Q
    |||||||||||  |||||||||||| ||| ||||  ||||||| ||| || ||  | ||  ||||||||||| |||||||||||||||||    
T  8421505 aaattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtgataattcagggactaagttgatgattcactc 8421416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 22155847 - 22155924
Alignment:
Q  30 aaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagtt 107  Q
    |||||||||||| |||| | |||||||||||||||  |||||| ||| || |||  ||| ||||||| ||||||||||    
T  22155847 aaattcagggacaaaatagctattttgcaaaattcatggacgaatttggccgatttttgaaaattcaaggacgaagtt 22155924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 22211762 - 22211839
Alignment:
Q  30 aaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagtt 107  Q
    |||||||||||| |||| | |||||||||||||||  |||||| ||| || |||  ||| ||||||| ||||||||||    
T  22211762 aaattcagggacaaaatagctattttgcaaaattcatggacgaatttggccgatttttgaaaattcaaggacgaagtt 22211839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 119
Target Start/End: Complemental strand, 30108594 - 30108565
Alignment:
Q  90 aaattcagggacgaagttgatgattcactc 119  Q
    ||||||||||||||||||||||||||||||    
T  30108594 aaattcagggacgaagttgatgattcactc 30108565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 39859235 - 39859304
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggac 70  Q
    ||||||||||||||||| ||||||  |  ||||||| |||| |||| ||||||| ||||||||| |||||    
T  39859235 cggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggac 39859304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 119
Target Start/End: Complemental strand, 46994689 - 46994660
Alignment:
Q  90 aaattcagggacgaagttgatgattcactc 119  Q
    ||||||||||||||||||||||||||||||    
T  46994689 aaattcagggacgaagttgatgattcactc 46994660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 27664519 - 27664479
Alignment:
Q  30 aaattcagggacgaaattgatattttgcaaaattcggggac 70  Q
    |||||||||||| || ||||||||||||||||||| |||||    
T  27664519 aaattcagggactaatttgatattttgcaaaattcagggac 27664479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 119
Target Start/End: Complemental strand, 34784099 - 34784067
Alignment:
Q  87 tgcaaattcagggacgaagttgatgattcactc 119  Q
    |||||||||| ||||||||||||||||||||||    
T  34784099 tgcaaattcaaggacgaagttgatgattcactc 34784067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 5e-18; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 10372712 - 10372830
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||||||||| |||||||||||||  || ||||||||||| ||||||||||||| ||| ||||  ||||| | ||| || || || || |||||||||||    
T  10372712 cggagggacctttttgatggacgtctgacaaattcagggatgaaattgatatttcgcataattgagggactaatttggccgacgcgtgaaaattcaggga 10372811  T
Q  101 cgaagttgatgattcactc 119  Q
    |||| |||||| |||||||    
T  10372812 cgaatttgatggttcactc 10372830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 10762699 - 10762581
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||||||||| |||||||||||||  || ||||||||||| |||||||| |||| ||| ||||  ||||| | ||| || || || || |||||||||||    
T  10762699 cggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtgaaaattcaggga 10762600  T
Q  101 cgaagttgatgattcactc 119  Q
    |||| |||||| |||||||    
T  10762599 cgaatttgatggttcactc 10762581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 41761752 - 41761860
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    ||||||||||||||||||||||||  |  |||||||||||| |||| ||||||| ||||||||  ||||||| ||| || |||  ||| ||||||| |||    
T  41761752 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttcgggacgaatttggccgatttttgaaaattcaagga 41761851  T
Q  101 cgaagttga 109  Q
    |||| ||||    
T  41761852 cgaatttga 41761860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 10371146 - 10371055
Alignment:
Q  30 aaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagttgatgattcactcta 121  Q
    ||||||||||| ||||||||||||| ||| ||||  ||||| | |||||| || || || |||||||||||| ||||||||| |||||||||    
T  10371146 aaattcagggatgaaattgatatttcgcataattgagggactaatttagccgacgcgtgaaaattcagggactaagttgatggttcactcta 10371055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 13450987 - 13451097
Alignment:
Q  2 ggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggac 101  Q
    |||||||||||||||||||||||  || ||||||| |||| |  ||||||||| |  ||||| |||||||| ||| |||||| | |||||||||| |||     
T  13450987 ggagggaccattttgatggacgtctgataaattcaaggactattttgatatttcgttaaattgggggacgaatttggctgattcatgcaaattca-ggat 13451085  T
Q  102 gaagttgatgat 113  Q
    ||||||||||||    
T  13451086 gaagttgatgat 13451097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 44794766 - 44794886
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||||||||| |||||||||||||  || |||||||||||  |||||||||||| ||| ||||  ||||||| |||  | || |  || |||||||||||    
T  44794766 cggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagggacgaatttgaccgacgtgtgaaaattcaggga 44794865  T
Q  101 cgaagttgatgattcactcta 121  Q
    | || |||||| |||||||||    
T  44794866 ctaaattgatggttcactcta 44794886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 35996181 - 35996110
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacga 72  Q
    |||||||||| |||||||||||||  || |||||||||||  |||||||||||||||| ||||  |||||||    
T  35996181 cggagggacctttttgatggacgtctgataaattcagggattaaattgatattttgcacaattgagggacga 35996110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 44558499 - 44558617
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||| ||||| |||||||||||||  || |||||||||||| || ||||||||| ||| ||||  |||| || ||| || ||  | || ||||||| |||    
T  44558499 cggaaggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgtgaaaattcaagga 44558598  T
Q  101 cgaagttgatgattcactc 119  Q
    ||||||||||| |||||||    
T  44558599 cgaagttgatggttcactc 44558617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 49523242 - 49523164
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagc 79  Q
    ||||||||||||||||||| ||||  |  |||||||||||| |||| ||||||| |||||||||  |||||| ||||||    
T  49523242 cggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcatggacgaatttagc 49523164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 41781657 - 41781588
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggac 70  Q
    ||||||||||||||||||||| ||  |  |||||||||||| ||||  |||||||||||||||| |||||    
T  41781657 cggagggaccattttgatggatgtctgtaaaattcagggactaaataaatattttgcaaaattcagggac 41781588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 121
Target Start/End: Original strand, 2828473 - 2828504
Alignment:
Q  90 aaattcagggacgaagttgatgattcactcta 121  Q
    ||||||||||||||||||||||||||||||||    
T  2828473 aaattcagggacgaagttgatgattcactcta 2828504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 51012044 - 51011981
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattc 64  Q
    ||||||||||||||||||||||||  |  |||||||| ||| |||| ||||||| |||||||||    
T  51012044 cggagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattc 51011981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 230525 - 230435
Alignment:
Q  30 aaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagttgatgattcactct 120  Q
    |||||||| ||| || ||||||||| ||| ||||  ||||||||||| || ||| ||| |||| ||| |||  ||||||||||||||||||    
T  230525 aaattcagagactaatttgatatttcgcataattgagggacgattttggccgatccttacaaactcaaggataaagttgatgattcactct 230435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 2691462 - 2691396
Alignment:
Q  30 aaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattca 96  Q
    |||||||||||| |||| |||||||||||||||| | |||||| ||| ||||||  ||| |||||||    
T  2691462 aaattcagggactaaatagatattttgcaaaatttgtggacgaatttggctgatttttgaaaattca 2691396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 39921612 - 39921494
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    ||||||||| |  ||||||||||| | | |||||||||||| |  ||||||||| |  ||||| |||||||| ||| || ||  | || |||||||||||    
T  39921612 cggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctgaaaattcaggga 39921513  T
Q  101 cgaagttgatgattcactc 119  Q
    |||| |||||| |||||||    
T  39921512 cgaaattgatggttcactc 39921494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 47941929 - 47941867
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaatt 63  Q
    |||||||||| |||||||||||||  || |||||||||||  |||||||||||| ||| ||||    
T  47941929 cggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataatt 47941867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 119
Target Start/End: Original strand, 39085214 - 39085243
Alignment:
Q  90 aaattcagggacgaagttgatgattcactc 119  Q
    ||||||||||||||||||||||||||||||    
T  39085214 aaattcagggacgaagttgatgattcactc 39085243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 39189500 - 39189383
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    ||||||||| |  ||||||||||| | | |||||||||||| |  ||||||||| |  ||||| |||||||| ||| || ||  | || |||||||||||    
T  39189500 cggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctgaaaattcaggga 39189401  T
Q  101 cgaagttgatgattcact 118  Q
    |||| |||||| ||||||    
T  39189400 cgaaattgatggttcact 39189383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 119
Target Start/End: Complemental strand, 42879304 - 42879275
Alignment:
Q  90 aaattcagggacgaagttgatgattcactc 119  Q
    ||||||||||||||||||||||||||||||    
T  42879304 aaattcagggacgaagttgatgattcactc 42879275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 119
Target Start/End: Complemental strand, 44992837 - 44992808
Alignment:
Q  90 aaattcagggacgaagttgatgattcactc 119  Q
    ||||||||||||||||||||||||||||||    
T  44992837 aaattcagggacgaagttgatgattcactc 44992808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 48813902 - 48813797
Alignment:
Q  4 agggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacga 103  Q
    |||||||||||||||||||||     ||||||||| || ||||  |||||||||||||||| ||||  | ||| ||||||  ||| ||||||| ||||||    
T  48813902 agggaccattttgatggacgtctataaaattcaggaactaaatatatattttgcaaaattcagggataaatttggctgatttttgaaaattcaaggacga 48813803  T
Q  104 agttga 109  Q
    | ||||    
T  48813802 atttga 48813797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 119
Target Start/End: Original strand, 13450363 - 13450395
Alignment:
Q  87 tgcaaattcagggacgaagttgatgattcactc 119  Q
    |||||||||| ||||||||||||||||||||||    
T  13450363 tgcaaattcaaggacgaagttgatgattcactc 13450395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 122
Target Start/End: Complemental strand, 43778418 - 43778386
Alignment:
Q  90 aaattcagggacgaagttgatgattcactctaa 122  Q
    ||||||| |||||||||||||||||||||||||    
T  43778418 aaattcaaggacgaagttgatgattcactctaa 43778386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 29077446 - 29077328
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||||||||| |||||||||||||  || ||||||||||| |||||||| |||| ||| ||||  ||||| | ||| || || || || |||||||||||    
T  29077446 cggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtgaaaattcaggga 29077347  T
Q  101 cgaagttgatgattcactc 119  Q
    |||| |||||| |||||||    
T  29077346 cgaatttgatggttcactc 29077328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 14338481 - 14338588
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    ||||||||||||||||||||||||  | |||||||||||| ||| | || |||| |||||||| | |||||| ||| ||||||  ||  ||||||| |||    
T  14338481 cggagggaccattttgatggacgtctgtgaaattcagggatgaattagacatttcgcaaaatttgaggacgaatttggctgatttttaaaaattcaagga 14338580  T
Q  101 cgaagttg 108  Q
    ||||||||    
T  14338581 cgaagttg 14338588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 32439097 - 32439168
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacga 72  Q
    ||||||||||||||||||||||||  |  |||||||||||| |||| ||||||| ||||||||| |||||||    
T  32439097 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacga 32439168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 3018439 - 3018545
Alignment:
Q  2 ggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggac 101  Q
    ||||||||| |||||||||||||  || |||||||||||| || ||||||||| ||| ||||  |||||||  || || || || || ||||||||||||    
T  3018439 ggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggacgaagttggccgacgcgtgaaaattcagggac 3018538  T
Q  102 gaagttg 108  Q
    |||||||    
T  3018539 gaagttg 3018545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 29112418 - 29112300
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||||||||| |||||||||||||  || ||||||||||| |||||||| |||| ||| ||||  ||||| | ||| || || || || |||||||||||    
T  29112418 cggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtgaaaattcaggga 29112319  T
Q  101 cgaagttgatgattcactc 119  Q
    | || |||||| |||||||    
T  29112318 ctaacttgatggttcactc 29112300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 20523484 - 20523421
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattc 64  Q
    ||||||||||||||||||||||||  |  |||||||||||| |||| ||||||| |||||||||    
T  20523484 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattc 20523421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 30639687 - 30639610
Alignment:
Q  43 aaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcagggacgaagttgatgattcactct 120  Q
    |||||||||||||||| ||||  ||||| | ||| || ||  | || |||||||||||||||||||||||||||||||    
T  30639687 aaattgatattttgcataattgagggactaatttggccgacccgtgaaaattcagggacgaagttgatgattcactct 30639610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 7372964 - 7373035
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacga 72  Q
    |||||||||||||||||||||||   |  |||||||||||| ||||  |||||| ||||||||| |||||||    
T  7372964 cggagggaccattttgatggacgcctgtaaaattcagggactaaataaatatttcgcaaaattcagggacga 7373035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 13613588 - 13613659
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacga 72  Q
    ||||||||| | ||||||||||||  |  |||||||||||| || ||||||||| ||||||||| |||||||    
T  13613588 cggagggactaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacga 13613659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 4641473 - 4641355
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||||||||| |||||||||| ||  || |||||||||||  ||||||||||||  || ||||  ||||||| ||| || ||  | || |||||||||||    
T  4641473 cggagggacctttttgatggaggtctgataaattcagggattaaattgatatttcacataattgagggacgaatttggccgacccgtgaaaattcaggga 4641374  T
Q  101 cgaagttgatgattcactc 119  Q
    | || |||||| |||||||    
T  4641373 ctaaattgatggttcactc 4641355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 17952048 - 17952166
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    ||||||||| |  ||||||||||| | | |||||||||||| |  ||||||||| |  ||||| |||||||| ||| || ||  | || |||||||||||    
T  17952048 cggagggacgaaattgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctgaaaattcaggga 17952147  T
Q  101 cgaagttgatgattcactc 119  Q
    |||| |||||| |||||||    
T  17952148 cgaaattgatggttcactc 17952166  T

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Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 124
Target Start/End: Complemental strand, 35174420 - 35174386
Alignment:
Q  90 aaattcagggacgaagttgatgattcactctaaaa 124  Q
    |||||||||||||||||||||||||||||| ||||    
T  35174420 aaattcagggacgaagttgatgattcactcaaaaa 35174386  T

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Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 119
Target Start/End: Complemental strand, 24662512 - 24662480
Alignment:
Q  87 tgcaaattcagggacgaagttgatgattcactc 119  Q
    |||||||||| ||||||||||||||||||||||    
T  24662512 tgcaaattcaaggacgaagttgatgattcactc 24662480  T

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Target: scaffold0477 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 6640 - 6758
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggacgattttagctgatgcttgcaaattcaggga 100  Q
    |||||||||| |||||||||| ||  || |||||||||||  ||||||||||||  || ||||  ||||||| ||| || ||  | || |||||||||||    
T  6640 cggagggacctttttgatggaggtctgataaattcagggattaaattgatatttcacataattgagggacgaatttggccgacccgtgaaaattcaggga 6739  T
Q  101 cgaagttgatgattcactc 119  Q
    | || |||||| |||||||    
T  6740 ctaaattgatggttcactc 6758  T

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Target: scaffold1454 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 1381 - 1328
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattt 54  Q
    ||||||||||||||||||||||||  |  |||||||||||| |||| |||||||    
T  1381 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattt 1328  T

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Target: scaffold0058 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 3412 - 3343
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggac 70  Q
    ||||||||| | ||||||||||||  |  |||||||||||| || ||||||||| ||||||||| |||||    
T  3412 cggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 3343  T

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Target: scaffold0058; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 4584 - 4515
Alignment:
Q  1 cggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattcggggac 70  Q
    ||||||||| | ||||||||||||  |  |||||||||||| || ||||||||| ||||||||| |||||    
T  4584 cggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 4515  T

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Target: scaffold0564 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 8371 - 8317
Alignment:
Q  8 accattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaattc 64  Q
    ||||||||||||||||| | | |||||||||||| |||| |||||||||||||||||    
T  8371 accattttgatggacgt-ata-aaattcagggactaaatagatattttgcaaaattc 8317  T

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