View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15215_low_18 (Length: 298)

Name: NF15215_low_18
Description: NF15215
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15215_low_18
NF15215_low_18
[»] chr2 (16 HSPs)
chr2 (17-266)||(14740367-14740616)
chr2 (129-230)||(23227289-23227390)
chr2 (114-235)||(10069219-10069340)
chr2 (131-196)||(20900678-20900743)
chr2 (117-197)||(31150653-31150733)
chr2 (37-118)||(14747801-14747883)
chr2 (114-200)||(15372223-15372309)
chr2 (54-118)||(14748059-14748124)
chr2 (115-200)||(37990060-37990145)
chr2 (115-200)||(41478686-41478771)
chr2 (114-171)||(41492893-41492950)
chr2 (116-200)||(3055557-3055641)
chr2 (116-200)||(4683979-4684063)
chr2 (116-200)||(15896841-15896925)
chr2 (116-200)||(44397546-44397630)
chr2 (116-200)||(44398685-44398769)
[»] chr8 (9 HSPs)
chr8 (118-230)||(30171483-30171595)
chr8 (117-200)||(8587170-8587253)
chr8 (117-200)||(31654613-31654696)
chr8 (114-200)||(54659-54745)
chr8 (114-200)||(2890209-2890295)
chr8 (116-198)||(25601049-25601131)
chr8 (115-200)||(7785825-7785910)
chr8 (115-200)||(7805746-7805831)
chr8 (116-200)||(43199401-43199485)
[»] chr5 (10 HSPs)
chr5 (118-237)||(9188490-9188610)
chr5 (117-200)||(26350397-26350480)
chr5 (115-200)||(36563585-36563670)
chr5 (116-200)||(23359941-23360025)
chr5 (117-200)||(11795168-11795251)
chr5 (114-200)||(37149002-37149088)
chr5 (152-198)||(39030602-39030648)
chr5 (131-200)||(3549594-3549663)
chr5 (114-171)||(13033127-13033184)
chr5 (136-232)||(2629559-2629655)
[»] chr3 (15 HSPs)
chr3 (138-230)||(25394358-25394450)
chr3 (136-200)||(11508387-11508451)
chr3 (117-200)||(17653712-17653795)
chr3 (117-200)||(37508921-37509004)
chr3 (114-200)||(4238591-4238677)
chr3 (114-200)||(22721928-22722014)
chr3 (114-200)||(34080077-34080163)
chr3 (115-200)||(44785443-44785528)
chr3 (116-200)||(19557099-19557183)
chr3 (116-200)||(33942979-33943063)
chr3 (129-201)||(35513485-35513557)
chr3 (116-200)||(36095727-36095811)
chr3 (112-200)||(42170393-42170481)
chr3 (116-200)||(46208029-46208113)
chr3 (116-200)||(49823428-49823512)
[»] chr6 (11 HSPs)
chr6 (127-230)||(4251319-4251422)
chr6 (114-201)||(14936503-14936590)
chr6 (129-189)||(6068998-6069058)
chr6 (115-167)||(17145004-17145056)
chr6 (114-200)||(8383016-8383102)
chr6 (114-200)||(8417840-8417926)
chr6 (115-200)||(33052841-33052926)
chr6 (116-200)||(2830334-2830418)
chr6 (116-200)||(6143553-6143637)
chr6 (116-200)||(11572192-11572276)
chr6 (152-200)||(31323839-31323887)
[»] chr7 (12 HSPs)
chr7 (116-237)||(7661086-7661207)
chr7 (114-200)||(9268753-9268839)
chr7 (116-218)||(28469480-28469582)
chr7 (115-200)||(9575407-9575492)
chr7 (114-200)||(1738494-1738580)
chr7 (114-200)||(7240746-7240832)
chr7 (114-200)||(22285696-22285782)
chr7 (115-200)||(1565776-1565861)
chr7 (114-171)||(36583471-36583528)
chr7 (114-171)||(38063910-38063967)
chr7 (115-200)||(46840858-46840943)
chr7 (116-200)||(38063960-38064044)
[»] chr4 (15 HSPs)
chr4 (114-200)||(42797729-42797815)
chr4 (135-200)||(41594672-41594737)
chr4 (115-200)||(43900547-43900632)
chr4 (116-200)||(33551200-33551284)
chr4 (116-200)||(47838664-47838748)
chr4 (116-171)||(24704446-24704501)
chr4 (116-199)||(25855082-25855165)
chr4 (114-200)||(3372118-3372204)
chr4 (114-200)||(3992973-3993059)
chr4 (136-230)||(38671480-38671574)
chr4 (136-198)||(43095270-43095332)
chr4 (114-200)||(47833608-47833694)
chr4 (114-200)||(48336260-48336346)
chr4 (129-205)||(20538728-20538804)
chr4 (124-200)||(41615723-41615799)
[»] scaffold0171 (1 HSPs)
scaffold0171 (120-205)||(12395-12480)
[»] chr1 (10 HSPs)
chr1 (114-161)||(5392144-5392191)
chr1 (153-200)||(29855095-29855142)
chr1 (114-200)||(25694316-25694402)
chr1 (114-200)||(26471112-26471198)
chr1 (114-200)||(27159405-27159491)
chr1 (114-200)||(44668140-44668226)
chr1 (114-192)||(44953060-44953138)
chr1 (116-200)||(17556751-17556836)
chr1 (116-200)||(9981646-9981730)
chr1 (115-171)||(11897130-11897186)
[»] scaffold0204 (1 HSPs)
scaffold0204 (114-200)||(23782-23868)
[»] scaffold0482 (1 HSPs)
scaffold0482 (115-200)||(12858-12943)


Alignment Details
Target: chr2 (Bit Score: 194; Significance: 1e-105; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 17 - 266
Target Start/End: Original strand, 14740367 - 14740616
Alignment:
Q  17 tcatacaattttatgtatcttcttaattctttctttcaatgttctacatcttcttaaaccctacaactaacttcacctttattaaggaaaatagttgtaa 116  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||| |||||||||||    
T  14740367 tcatacaattttatgcatcttcttaattctttctttcaatgttctatatcttcttaaatcctacaactaacttcacctttattcaggataatagttgtaa 14740466  T
Q  117 tactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatcacatttaattaacttaa 216  Q
    ||||||||  |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| || ||||||    
T  14740467 tactcccttcgatcctatatataagagatatttgtgtcaacaaaaggtaatgtatttcgtccaaatttttaaccagatacatcacatttagttgacttaa 14740566  T
Q  217 atattttttataaaaaggatctggggagtagtaaattgattacttttaca 266  Q
    || ||| |||||||||||||| ||||||||||||||||||||||||||||    
T  14740567 atgtttcttataaaaaggatccggggagtagtaaattgattacttttaca 14740616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 23227390 - 23227289
Alignment:
Q  129 tcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatcacatttaattaacttaaatattttttata 228  Q
    |||||| ||||||||| ||||  ||||||||||| | |||||||| ||||||||| |||  ||||||||||||||||  || || ||||||||| |||||    
T  23227390 tcctatttataagagacattttggtcaacaaaagttgatgtatttggtccaaattcttagtcagatacatcacattttgttgacctaaatatttcttata 23227291  T
Q  229 aa 230  Q
    ||    
T  23227290 aa 23227289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 10069340 - 10069219
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatcacatttaattaact 213  Q
    ||||||| |||||| | |||| | ||||| ||||||  ||||||||||| |||||||| | |||||| ||||||||||||||||| |  ||| ||| |||    
T  10069340 taatacttcctctggtactatttttaagaaatatttaggtcaacaaaagttaatgtatctagtccaattttttaaccagatacataaacttttattgact 10069241  T
Q  214 taaatattttttataaaaagga 235  Q
     |||| | |||||| |||||||    
T  10069240 caaatgtcttttatcaaaagga 10069219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 20900678 - 20900743
Alignment:
Q  131 ctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatac 196  Q
    |||| ||||||||| ||||| |||| |||||| | |||||| ||||||||||||| ||||||||||    
T  20900678 ctatttataagagacatttgggtcagcaaaagttgatgtatcttgtccaaattttgaaccagatac 20900743  T

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Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 197
Target Start/End: Original strand, 31150653 - 31150733
Alignment:
Q  117 tactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagataca 197  Q
    ||||| ||| |||||||| ||||||||| | ||| ||||||||||| | |||||||| | | ||||||||||| |||||||    
T  31150653 tactctctccgatcctatttataagagaaagttgcgtcaacaaaagtttatgtatttggactaaatttttaactagataca 31150733  T

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Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 14747801 - 14747883
Alignment:
Q  37 tcttaattctttctttcaatgttctacatcttctt-aaaccctacaactaacttcacctttattaaggaaaatagttgtaata 118  Q
    ||||| ||||||| || |||||||||||||||||| |||| ||  ||||||||||||   |||| || |||||||||||||||    
T  14747801 tcttatttctttcgttgaatgttctacatcttcttaaaactctcaaactaacttcacgagtattgagaaaaatagttgtaata 14747883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 15372223 - 15372309
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||||||||   |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  15372223 taatactccctccagtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacgagatacatca 15372309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 14748059 - 14748124
Alignment:
Q  54 aatgttctacatcttcttaa-accctacaactaacttcacctttattaaggaaaatagttgtaata 118  Q
    |||||||||||||||||||| |||||  |||||||||||| | |||| || ||||||| |||||||    
T  14748059 aatgttctacatcttcttaagaccctcaaactaacttcacgtgtattgagaaaaatagatgtaata 14748124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 200
Target Start/End: Complemental strand, 37990145 - 37990060
Alignment:
Q  115 aatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    |||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  37990145 aatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 37990060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 200
Target Start/End: Complemental strand, 41478771 - 41478686
Alignment:
Q  115 aatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    |||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  41478771 aatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 41478686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 41492893 - 41492950
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtat 171  Q
    |||||||||||| | |||||| ||||||||| ||||| ||||||||||| | ||||||    
T  41492893 taatactccctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtat 41492950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 200
Target Start/End: Original strand, 3055557 - 3055641
Alignment:
Q  116 atactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  3055557 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 3055641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 200
Target Start/End: Complemental strand, 4684063 - 4683979
Alignment:
Q  116 atactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  4684063 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 4683979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 200
Target Start/End: Original strand, 15896841 - 15896925
Alignment:
Q  116 atactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  15896841 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 15896925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 200
Target Start/End: Original strand, 44397546 - 44397630
Alignment:
Q  116 atactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  44397546 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 44397630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 200
Target Start/End: Original strand, 44398685 - 44398769
Alignment:
Q  116 atactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  44398685 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 44398769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 230
Target Start/End: Original strand, 30171483 - 30171595
Alignment:
Q  118 actccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatcacatttaattaacttaaa 217  Q
    |||||||| |||||||| || ||||||  |||| ||||||||||| ||||||| || ||||||||| |||| |||||||||| |||||  || |||||||    
T  30171483 actccctccgatcctatttacaagagaattttgagtcaacaaaagttaatgtacttggtccaaattcttaatcagatacatcgcattttgttgacttaaa 30171582  T
Q  218 tattttttataaa 230  Q
    | ||| |||||||    
T  30171583 tgtttcttataaa 30171595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 200
Target Start/End: Original strand, 8587170 - 8587253
Alignment:
Q  117 tactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||||| | |||||| ||||||||| | ||  ||||||||||| | |||||||||| | ||||||||||| ||||||||||    
T  8587170 tactccctccggtcctatttataagagaaagtttggtcaacaaaagttgatgtattttgactaaatttttaactagatacatca 8587253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 200
Target Start/End: Original strand, 31654613 - 31654696
Alignment:
Q  117 tactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  31654613 tactccctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 31654696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 54745 - 54659
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  54745 taatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 54659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 2890295 - 2890209
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  2890295 taatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 2890209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 198
Target Start/End: Complemental strand, 25601131 - 25601049
Alignment:
Q  116 atactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacat 198  Q
    ||||| |||| |||||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||    
T  25601131 atactacctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacat 25601049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 200
Target Start/End: Complemental strand, 7785910 - 7785825
Alignment:
Q  115 aatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    |||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  7785910 aatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 7785825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 200
Target Start/End: Complemental strand, 7805831 - 7805746
Alignment:
Q  115 aatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    |||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  7805831 aatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 7805746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 200
Target Start/End: Complemental strand, 43199485 - 43199401
Alignment:
Q  116 atactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  43199485 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 43199401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 237
Target Start/End: Original strand, 9188490 - 9188610
Alignment:
Q  118 actccctctgatcctatatataagagatatttgtgtcaac-aaaagataatgtattttgtccaaatttttaaccagatacatcacatttaattaacttaa 216  Q
    |||| |||||||||||| ||||||||||||||| |||||| ||||| |||||||||| ||||||| | || | ||||| |||||| ||| ||| ||||||    
T  9188490 actctctctgatcctatttataagagatatttgagtcaacaaaaagttaatgtatttggtccaaactcttgatcagatgcatcactttttatttacttaa 9188589  T
Q  217 atattttttataaaaaggatc 237  Q
    ||  || ||||||| ||||||    
T  9188590 atgcttcttataaataggatc 9188610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 200
Target Start/End: Complemental strand, 26350480 - 26350397
Alignment:
Q  117 tactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||||| |||||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  26350480 tactccctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 26350397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 200
Target Start/End: Complemental strand, 36563670 - 36563585
Alignment:
Q  115 aatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    |||||| |||| |||||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  36563670 aatactacctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 36563585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 200
Target Start/End: Original strand, 23359941 - 23360025
Alignment:
Q  116 atactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||| |||||| |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  23359941 atactacctctggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 23360025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 200
Target Start/End: Original strand, 11795168 - 11795251
Alignment:
Q  117 tactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    |||| |||| |||||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  11795168 tactacctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 11795251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 37149088 - 37149002
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  37149088 taatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 37149002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 39030648 - 39030602
Alignment:
Q  152 gtcaacaaaagataatgtattttgtccaaatttttaaccagatacat 198  Q
    ||||||||||| |||||||||| || |||||||||||||| ||||||    
T  39030648 gtcaacaaaagttaatgtatttggtacaaatttttaaccaaatacat 39030602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 3549663 - 3549594
Alignment:
Q  131 ctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    |||| ||||||||||||||  ||||||||||  |||||||| | ||| ||||||||||||  ||||||||    
T  3549663 ctatttataagagatattttagtcaacaaaaattaatgtatctggtctaaatttttaaccgaatacatca 3549594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 13033184 - 13033127
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtat 171  Q
    |||||||||||| |||||||| |||||||||  |||| ||||||||||| | ||||||    
T  13033184 taatactccctccgatcctatttataagagaattttgggtcaacaaaagttgatgtat 13033127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 232
Target Start/End: Complemental strand, 2629655 - 2629559
Alignment:
Q  136 tataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatcacatttaattaacttaaatattttttataaaaa 232  Q
    ||||||| ||||||  ||||||||||| |||||||| |  || || |||||||| | |||||||| |||| ||| ||| |||| ||| |||||||||    
T  2629655 tataagaaatatttaggtcaacaaaagttaatgtatctgatctaattttttaactatatacatcaaattttattgactcaaatgtttcttataaaaa 2629559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 230
Target Start/End: Original strand, 25394358 - 25394450
Alignment:
Q  138 taagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatcacatttaattaacttaaatattttttataaa 230  Q
    |||||||||||||  |||||||||  |||||||||| || |||||| ||||||||||| |||||||||  ||||||||||||||  |||||||    
T  25394358 taagagatatttggatcaacaaaaattaatgtatttggttcaaattcttaaccagataaatcacatttccttaacttaaatattgcttataaa 25394450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 200
Target Start/End: Complemental strand, 11508451 - 11508387
Alignment:
Q  136 tataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||| ||||||||| ||||||||||  ||||||||||  || ||||| ||||||||||||||||    
T  11508451 tataaaagatatttgagtcaacaaaaattaatgtatttactctaaattcttaaccagatacatca 11508387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 200
Target Start/End: Original strand, 17653712 - 17653795
Alignment:
Q  117 tactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  17653712 tactccctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 17653795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 200
Target Start/End: Original strand, 37508921 - 37509004
Alignment:
Q  117 tactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  37508921 tactccctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 37509004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 4238591 - 4238677
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  4238591 taatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 4238677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 22721928 - 22722014
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  22721928 taatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 22722014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 34080163 - 34080077
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  34080163 taatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacaagatacatca 34080077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 200
Target Start/End: Complemental strand, 44785528 - 44785443
Alignment:
Q  115 aatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    |||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  44785528 aatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 44785443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 200
Target Start/End: Complemental strand, 19557183 - 19557099
Alignment:
Q  116 atactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  19557183 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 19557099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 200
Target Start/End: Complemental strand, 33943063 - 33942979
Alignment:
Q  116 atactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||| || |||||||| ||||| ||| | ||  ||||||||||| |||||||||| | |  |||||||||| ||||||||||    
T  33943063 atactccttccgatcctatttataaaagaaagttaggtcaacaaaagttaatgtatttggactgaatttttaactagatacatca 33942979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 35513485 - 35513557
Alignment:
Q  129 tcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatcac 201  Q
    |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| |||||||||||    
T  35513485 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcac 35513557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 200
Target Start/End: Complemental strand, 36095811 - 36095727
Alignment:
Q  116 atactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    |||||||||| | |||||| ||||||| | ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  36095811 atactccctccggtcctatttataagataaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 36095727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 200
Target Start/End: Complemental strand, 42170481 - 42170393
Alignment:
Q  112 tgtaatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||||| |||| | || ||| ||||||||| ||||  |||||||||||  ||||||||| |    |||||||||||||||||||||    
T  42170481 tgtaatactacctccggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggagtgaatttttaaccagatacatca 42170393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 200
Target Start/End: Original strand, 46208029 - 46208113
Alignment:
Q  116 atactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    |||||||||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||  ||||||||||    
T  46208029 atactccctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatca 46208113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 200
Target Start/End: Complemental strand, 49823512 - 49823428
Alignment:
Q  116 atactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  49823512 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 49823428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 230
Target Start/End: Original strand, 4251319 - 4251422
Alignment:
Q  127 gatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatcacatttaattaacttaaatatttttta 226  Q
    |||||||| || |||||| ||||| ||||||||||| ||| ||| ||  |||||||| ||||| ||||||||||||||| ||| || ||||| ||| |||    
T  4251319 gatcctatttacaagagaaatttgagtcaacaaaagttaacgtacttgatccaaattcttaactagatacatcacattttattgacctaaatgtttctta 4251418  T
Q  227 taaa 230  Q
    ||||    
T  4251419 taaa 4251422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 201
Target Start/End: Complemental strand, 14936590 - 14936503
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatcac 201  Q
    ||||| |||||||| |||||| ||||||||||||||| |||||||| || | |||||||| |  |||||| ||||| |||||||||||    
T  14936590 taataatccctctggtcctatttataagagatatttgggtcaacaatagttgatgtatttggaacaaattcttaactagatacatcac 14936503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 6069058 - 6068998
Alignment:
Q  129 tcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaac 189  Q
    |||||| ||||| ||||||||  ||||||||||| |||||||||| ||| |||||||||||    
T  6069058 tcctatttataaaagatatttaggtcaacaaaagttaatgtatttggtctaaatttttaac 6068998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 17145004 - 17145056
Alignment:
Q  115 aatactccctctgatcctatatataagagatatttgtgtcaacaaaagataat 167  Q
    |||||||||||||||| ||  |||||||||||||||  |||||||||||||||    
T  17145004 aatactccctctgatcttaattataagagatatttgaatcaacaaaagataat 17145056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 8383102 - 8383016
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  8383102 taatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 8383016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 8417926 - 8417840
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    |||||||||||||| || ||| ||||||||| ||||  |||||||||||  ||||||||| |    |||||||||| ||||||||||    
T  8417926 taatactccctctggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatca 8417840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 200
Target Start/End: Complemental strand, 33052926 - 33052841
Alignment:
Q  115 aatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    |||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  33052926 aatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 33052841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 200
Target Start/End: Original strand, 2830334 - 2830418
Alignment:
Q  116 atactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  2830334 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 2830418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 200
Target Start/End: Original strand, 6143553 - 6143637
Alignment:
Q  116 atactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||| |||| |||||||| ||||||||| ||||  |||||||||||  ||||||||| |    |||||||||| ||||||||||    
T  6143553 atactacctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatca 6143637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 200
Target Start/End: Complemental strand, 11572276 - 11572192
Alignment:
Q  116 atactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  11572276 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 11572192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 31323839 - 31323887
Alignment:
Q  152 gtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||||||| ||||||||||||| |||| |||  |||||||||||||    
T  31323839 gtcaacaaaagttaatgtattttgttcaaaatttgtaccagatacatca 31323887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 237
Target Start/End: Complemental strand, 7661207 - 7661086
Alignment:
Q  116 atactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatcacatttaattaactta 215  Q
    |||||||||||| |||||| |||| |||| ||||| ||||||||||| | |||||| | |||||| ||||| ||||| |||||||  ||| ||| || ||    
T  7661207 atactccctctggtcctatttatatgagacatttgggtcaacaaaagttgatgtatctagtccaatttttttaccagctacatcaacttttattgacata 7661108  T
Q  216 aatattttttataaaaaggatc 237  Q
    ||| | | ||||||| ||||||    
T  7661107 aatttctcttataaataggatc 7661086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 9268753 - 9268839
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||| |||||| |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  9268753 taatactacctctggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 9268839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 218
Target Start/End: Original strand, 28469480 - 28469582
Alignment:
Q  116 atactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatcacatttaattaactta 215  Q
    |||||||||  |||| ||| ||||| ||| ||||  ||||||||||| ||||||||   ||||||||| |||| |||||||||||||||| ||| || ||    
T  28469480 atactcccttcgatcttatttataaaagacatttaggtcaacaaaagttaatgtatcaggtccaaattattaatcagatacatcacattttattgaccta 28469579  T
Q  216 aat 218  Q
    |||    
T  28469580 aat 28469582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 200
Target Start/End: Original strand, 9575407 - 9575492
Alignment:
Q  115 aatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||||||||| |||||| | ||||||| | ||| ||||||||||| ||| |||||| | |  |||||||||| ||||||||||    
T  9575407 aatactccctctggtcctatttgtaagagaaagttgggtcaacaaaagttaacgtatttagactgaatttttaactagatacatca 9575492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 1738580 - 1738494
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  1738580 taatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 1738494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 7240746 - 7240832
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  7240746 taatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 7240832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 22285696 - 22285782
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    |||||||||||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||  ||||||||||    
T  22285696 taatactccctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatca 22285782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 200
Target Start/End: Complemental strand, 1565861 - 1565776
Alignment:
Q  115 aatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    |||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  1565861 aatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 1565776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 36583528 - 36583471
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtat 171  Q
    |||||||||||| |||||||| |||||||||  |||| ||||||||||| | ||||||    
T  36583528 taatactccctccgatcctatttataagagaattttgggtcaacaaaagttgatgtat 36583471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 38063910 - 38063967
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtat 171  Q
    |||||||||||||| |||||| |||||||||  |||| ||||||||||| | ||||||    
T  38063910 taatactccctctggtcctatttataagagaattttgggtcaacaaaagttgatgtat 38063967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 200
Target Start/End: Original strand, 46840858 - 46840943
Alignment:
Q  115 aatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    |||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  46840858 aatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 46840943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 200
Target Start/End: Complemental strand, 38064044 - 38063960
Alignment:
Q  116 atactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  38064044 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 38063960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000001; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 42797729 - 42797815
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||| |||| | |||||||||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  42797729 taatactacctccggtcctatatataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 42797815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 41594672 - 41594737
Alignment:
Q  135 atataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    |||||||||| | ||| ||||||||||| | |||||| | ||||||||||| ||||||||||||||    
T  41594672 atataagagaaagttgggtcaacaaaagttgatgtatatggtccaaattttgaaccagatacatca 41594737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 200
Target Start/End: Original strand, 43900547 - 43900632
Alignment:
Q  115 aatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||||||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  43900547 aatactccctccggtcctatttataagagaaatttaggtcaacaaaagtaaatgtatttggactgaatttttaactagatacatca 43900632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 200
Target Start/End: Original strand, 33551200 - 33551284
Alignment:
Q  116 atactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||||| |  |||||||||| ||||||||||    
T  33551200 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtattttgactgaatttttaactagatacatca 33551284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 200
Target Start/End: Complemental strand, 47838748 - 47838664
Alignment:
Q  116 atactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||| |||| |||||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  47838748 atactacctccgatcctatttataagagaaatttcggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 47838664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 24704501 - 24704446
Alignment:
Q  116 atactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtat 171  Q
    |||||||||| |||||||| |||||||||  |||| ||||||||||| ||||||||    
T  24704501 atactccctccgatcctatttataagagaattttgggtcaacaaaagttaatgtat 24704446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 199
Target Start/End: Original strand, 25855082 - 25855165
Alignment:
Q  116 atactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatc 199  Q
    |||||||||| | |||||| ||| ||||| | ||| ||||||||||| |||||||||| | |  |||||||||||| |||||||    
T  25855082 atactccctcaggtcctatttatgagagaaagttgagtcaacaaaagttaatgtatttggactgaatttttaaccaaatacatc 25855165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 3372118 - 3372204
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  3372118 taatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 3372204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 3992973 - 3993059
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  3992973 taatactacctccggtcctatttataagagaaatttcggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 3993059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 230
Target Start/End: Complemental strand, 38671574 - 38671480
Alignment:
Q  136 tataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatcacatttaattaacttaaatattttttataaa 230  Q
    ||||| ||| |||||| | |||||| | |||||||||| ||||||||| ||||| |  || ||||| |||  || ||||||||||||||||||||    
T  38671574 tataaaagacatttgtattaacaaacgttaatgtatttggtccaaattcttaactaagtatatcaccttttgttgacttaaatattttttataaa 38671480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 198
Target Start/End: Complemental strand, 43095332 - 43095270
Alignment:
Q  136 tataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacat 198  Q
    ||||||||||||||  ||||||||||  |||||||| | ||||||||||| ||||| ||||||    
T  43095332 tataagagatatttaagtcaacaaaaattaatgtatctggtccaaattttgaaccatatacat 43095270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 47833608 - 47833694
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  47833608 taatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 47833694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 48336260 - 48336346
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  48336260 taatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 48336346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 205
Target Start/End: Complemental strand, 20538804 - 20538728
Alignment:
Q  129 tcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatcacattt 205  Q
    |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| |||||||||| ||||    
T  20538804 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaaattt 20538728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 200
Target Start/End: Complemental strand, 41615799 - 41615723
Alignment:
Q  124 tctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||||||| ||||||||| | ||  ||||||||||| |||||||||| | |  |||||||||| | ||||||||    
T  41615799 tctgatcctatttataagagaaaattaggtcaacaaaagttaatgtatttggacttaatttttaactaaatacatca 41615723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 12480 - 12395
Alignment:
Q  120 tccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatcacattt 205  Q
    |||||| | |||||| ||||||||||||||  ||||| ||||| |  ||| ||| ||| ||||| |||||||||||||||||||||    
T  12480 tccctccggtcctatttataagagatattttggtcaaaaaaagttggtgtgtttggtctaaattcttaaccagatacatcacattt 12395  T

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Target: chr1 (Bit Score: 32; Significance: 0.000000007; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 5392144 - 5392191
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaa 161  Q
    |||||||| ||| |||||||| ||||||||| ||||||||||||||||    
T  5392144 taatactcactccgatcctatttataagagacatttgtgtcaacaaaa 5392191  T

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Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 153 - 200
Target Start/End: Complemental strand, 29855142 - 29855095
Alignment:
Q  153 tcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    |||||||||| |||||||||| || |||||||||||||| ||||||||    
T  29855142 tcaacaaaagttaatgtatttcgtacaaatttttaaccaaatacatca 29855095  T

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Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 25694316 - 25694402
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||||||||||||||||| ||||||||| ||||   |||| |||||  ||||||||| |    |||||||||| ||||||||||    
T  25694316 taatactccctctgatcctatttataagagaaatttagatcaataaaagtgaatgtatttggattgaatttttaactagatacatca 25694402  T

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Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 26471198 - 26471112
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  26471198 taatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 26471112  T

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Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 27159491 - 27159405
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  27159491 taatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 27159405  T

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Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 44668226 - 44668140
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  44668226 taatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 44668140  T

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Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 192
Target Start/End: Original strand, 44953060 - 44953138
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccag 192  Q
    |||||||| ||||||| |||| ||||||| | ||||| ||||| ||||| | |||||| | ||||||||||| ||||||    
T  44953060 taatactctctctgattctatttataagaaacatttgagtcaataaaagttgatgtatctggtccaaattttgaaccag 44953138  T

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Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 200
Target Start/End: Original strand, 17556751 - 17556836
Alignment:
Q  116 atactccctctgatcctatatataagagatatttgtgtcaacaaaagat-aatgtattttgtccaaatttttaaccagatacatca 200  Q
    |||||||||||| |||||| ||||||||| | ||  ||||||||||| | ||||||||| | |  |||||||||| ||||||||||    
T  17556751 atactccctctggtcctatttataagagaaagttaggtcaacaaaagttaaatgtatttggactgaatttttaactagatacatca 17556836  T

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Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 200
Target Start/End: Original strand, 9981646 - 9981730
Alignment:
Q  116 atactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  9981646 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 9981730  T

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Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 11897186 - 11897130
Alignment:
Q  115 aatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtat 171  Q
    ||||||||||| | |||||| ||||||||| ||||| ||||||||||| | ||||||    
T  11897186 aatactccctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtat 11897130  T

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Target: scaffold0204 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 23782 - 23868
Alignment:
Q  114 taatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    ||||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  23782 taatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 23868  T

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Target: scaffold0482 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 200
Target Start/End: Original strand, 12858 - 12943
Alignment:
Q  115 aatactccctctgatcctatatataagagatatttgtgtcaacaaaagataatgtattttgtccaaatttttaaccagatacatca 200  Q
    |||||| |||| | |||||| ||||||||| ||||  |||||||||||  ||||||||| | |  |||||||||| ||||||||||    
T  12858 aatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 12943  T

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