View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15215_low_3 (Length: 586)
Name: NF15215_low_3
Description: NF15215
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15215_low_3 |
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Alignment Details
Target: chr4 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 56043387 - 56043616
Alignment:
| Q |
1 |
actcttcccaccaaagagtataacttttttgggcggtggcgtttcacgttgaatcctggtccgtttaatatgaaggagcatgttattatcactatttttg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
56043387 |
actcttcccaccaaagagtataacttttttgggcggtggcgtttcacgttgaatcctggtccgtttaatatgaaggagcatgttattatcactatttttg |
56043486 |
T |
|
| Q |
101 |
ctaactgtggtgtttctcaaggtggtggtgatgcttactccattggtgctattactattatgaaagcttattacaaacaatctctcagttttctccttgc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
56043487 |
ctaactgtggtgtttctcaaggtggtggtgatgcttactccattggtgctattactattatgaaagcttattacaaacaatctctcagttttctccttgc |
56043586 |
T |
|
| Q |
201 |
tctattcatcgtcttaaccacacaggttct |
230 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
56043587 |
tctattcatcgtcttaaccacacaggttct |
56043616 |
T |
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