View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15216_high_2 (Length: 237)
Name: NF15216_high_2
Description: NF15216
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15216_high_2 |
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Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 41748237 - 41748453
Alignment:
| Q |
1 |
aatgttatcgttccaatgagtactgaatctttacgtgaatgtgaaaatgaatgttcgtctgtgtcggggaatttgtttgacaatgatttagtaaaatctg |
100 |
Q |
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| T |
41748237 |
aatgttatcgttccaatgagtactgaatctttacgtgaatgtgaaaatgaatgttcgtctgtgtctgggaatttgtttgacaatgatttagtaaaatctg |
41748336 |
T |
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| Q |
101 |
agtcagtttttccgattcctaatgatacgttatttgatgagtttggaaacatgttcttattccatgatgatttgagtggaagttttgtcgatacttcgat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41748337 |
agtcagtttttccgattcctaatgatacgttatttgatgagtttggaaacatgttcttattccatgatgatttgagtggaagttttgtcgatacttcgat |
41748436 |
T |
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| Q |
201 |
taatagtttggatttag |
217 |
Q |
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||||||||||||||||| |
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| T |
41748437 |
taatagtttggatttag |
41748453 |
T |
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