View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15217_low_24 (Length: 386)

Name: NF15217_low_24
Description: NF15217
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15217_low_24
NF15217_low_24
[»] chr4 (30 HSPs)
chr4 (79-375)||(42419482-42419775)
chr4 (79-375)||(25478066-25478358)
chr4 (79-289)||(6784830-6785040)
chr4 (79-289)||(19549451-19549661)
chr4 (94-289)||(36854913-36855108)
chr4 (79-289)||(12835032-12835241)
chr4 (90-289)||(18032757-18032956)
chr4 (90-289)||(50696782-50696981)
chr4 (94-263)||(19550108-19550277)
chr4 (79-270)||(25236377-25236568)
chr4 (79-261)||(42418974-42419156)
chr4 (79-263)||(12834408-12834592)
chr4 (79-263)||(25478680-25478864)
chr4 (79-263)||(36855548-36855731)
chr4 (89-260)||(50696183-50696354)
chr4 (121-256)||(29101713-29101848)
chr4 (269-336)||(12834954-12835021)
chr4 (269-336)||(50696704-50696771)
chr4 (269-375)||(18032967-18033072)
chr4 (269-375)||(36855119-36855224)
chr4 (269-375)||(19549672-19549777)
chr4 (131-289)||(32383746-32383907)
chr4 (185-251)||(46823337-46823403)
chr4 (97-193)||(13767497-13767593)
chr4 (79-181)||(13767686-13767787)
chr4 (166-263)||(32383275-32383374)
chr4 (98-163)||(29004321-29004386)
chr4 (79-148)||(550316-550386)
chr4 (79-140)||(45919500-45919561)
chr4 (79-119)||(21825174-21825214)
[»] chr6 (19 HSPs)
chr6 (100-336)||(5114213-5114449)
chr6 (79-289)||(18969706-18969915)
chr6 (89-289)||(34713214-34713414)
chr6 (110-289)||(24063039-24063218)
chr6 (93-263)||(24063660-24063830)
chr6 (79-263)||(18969100-18969284)
chr6 (269-375)||(34713097-34713203)
chr6 (269-375)||(24063229-24063335)
chr6 (79-181)||(1370149-1370250)
chr6 (79-175)||(1371023-1371119)
chr6 (98-163)||(10788965-10789030)
chr6 (94-149)||(32907431-32907486)
chr6 (97-171)||(4620870-4620944)
chr6 (221-263)||(5121369-5121411)
chr6 (80-149)||(18649895-18649964)
chr6 (79-119)||(8992896-8992936)
chr6 (79-119)||(9017343-9017383)
chr6 (302-334)||(18969649-18969681)
chr6 (83-183)||(35073373-35073473)
[»] chr3 (28 HSPs)
chr3 (79-289)||(16303245-16303455)
chr3 (79-289)||(46889122-46889332)
chr3 (80-289)||(46914962-46915170)
chr3 (80-289)||(50802445-50802653)
chr3 (80-289)||(50873224-50873432)
chr3 (97-289)||(37986421-37986613)
chr3 (94-263)||(37987054-37987223)
chr3 (79-263)||(16302623-16302806)
chr3 (79-263)||(46915608-46915791)
chr3 (94-263)||(46888480-46888649)
chr3 (79-263)||(50801822-50802006)
chr3 (79-263)||(50873874-50874058)
chr3 (94-263)||(13644003-13644172)
chr3 (177-286)||(18346890-18346999)
chr3 (127-227)||(18346985-18347085)
chr3 (269-375)||(16303129-16303234)
chr3 (269-374)||(37986624-37986728)
chr3 (269-375)||(50802329-50802434)
chr3 (269-375)||(50873443-50873548)
chr3 (269-375)||(46888974-46889080)
chr3 (94-194)||(16854594-16854694)
chr3 (269-336)||(46915181-46915248)
chr3 (97-183)||(7253229-7253315)
chr3 (79-148)||(54584877-54584945)
chr3 (81-149)||(53948651-53948719)
chr3 (79-149)||(20200605-20200675)
chr3 (79-149)||(20202789-20202859)
chr3 (79-149)||(53950074-53950144)
[»] chr5 (31 HSPs)
chr5 (79-306)||(15883155-15883382)
chr5 (90-289)||(25836466-25836665)
chr5 (79-375)||(3259568-3259873)
chr5 (90-289)||(9918339-9918538)
chr5 (79-289)||(4737659-4737870)
chr5 (79-289)||(14480738-14480948)
chr5 (79-289)||(490903-491114)
chr5 (94-289)||(10394720-10394915)
chr5 (79-263)||(492018-492201)
chr5 (79-263)||(14481342-14481525)
chr5 (90-289)||(12281107-12281306)
chr5 (90-289)||(15915084-15915283)
chr5 (79-277)||(36038453-36038651)
chr5 (79-263)||(3259062-3259245)
chr5 (94-263)||(9917733-9917902)
chr5 (94-263)||(15915697-15915866)
chr5 (97-263)||(25835861-25836027)
chr5 (79-263)||(4737034-4737218)
chr5 (97-263)||(10394112-10394278)
chr5 (108-263)||(12281745-12281900)
chr5 (269-375)||(12281317-12281422)
chr5 (269-375)||(4737543-4737648)
chr5 (269-336)||(15915294-15915361)
chr5 (269-335)||(10394643-10394709)
chr5 (269-371)||(25836354-25836455)
chr5 (269-375)||(9918225-9918328)
chr5 (269-375)||(491125-491232)
chr5 (269-325)||(14480959-14481017)
chr5 (79-149)||(23206191-23206261)
chr5 (79-119)||(11768830-11768870)
chr5 (81-149)||(21145927-21145995)
[»] chr8 (25 HSPs)
chr8 (79-289)||(24022878-24023087)
chr8 (91-289)||(41272966-41273164)
chr8 (80-289)||(34654192-34654401)
chr8 (79-263)||(20054258-20054442)
chr8 (79-263)||(34654805-34654984)
chr8 (94-263)||(14763210-14763379)
chr8 (93-227)||(41273703-41273837)
chr8 (79-225)||(20054903-20055048)
chr8 (79-194)||(3583593-3583708)
chr8 (79-194)||(3583242-3583357)
chr8 (269-336)||(41273175-41273242)
chr8 (79-181)||(29267934-29268035)
chr8 (269-375)||(20054768-20054873)
chr8 (269-375)||(41273333-41273438)
chr8 (224-289)||(41273449-41273514)
chr8 (79-175)||(29268785-29268881)
chr8 (94-175)||(16846817-16846898)
chr8 (79-194)||(16847624-16847738)
chr8 (269-375)||(34654412-34654519)
chr8 (79-175)||(3582422-3582518)
chr8 (79-174)||(14754163-14754256)
chr8 (79-148)||(10092908-10092977)
chr8 (256-289)||(14762764-14762797)
chr8 (292-336)||(14762813-14762857)
chr8 (79-119)||(5881132-5881172)
[»] chr2 (34 HSPs)
chr2 (79-289)||(2054937-2055147)
chr2 (92-289)||(36150338-36150535)
chr2 (79-289)||(34452239-34452449)
chr2 (79-289)||(863196-863405)
chr2 (90-289)||(37875391-37875590)
chr2 (79-263)||(863844-864028)
chr2 (79-263)||(36150979-36151163)
chr2 (121-289)||(27006239-27006407)
chr2 (79-263)||(2054345-2054528)
chr2 (129-289)||(8043081-8043241)
chr2 (79-263)||(34452888-34453071)
chr2 (79-257)||(8043688-8043866)
chr2 (79-263)||(37876030-37876215)
chr2 (110-277)||(7498176-7498344)
chr2 (79-212)||(39830738-39830866)
chr2 (90-263)||(7486774-7486949)
chr2 (269-375)||(34452460-34452565)
chr2 (269-375)||(36150546-36150651)
chr2 (269-375)||(37875601-37875706)
chr2 (269-336)||(27006161-27006228)
chr2 (79-181)||(24433332-24433434)
chr2 (79-163)||(19911108-19911193)
chr2 (269-375)||(8043252-8043357)
chr2 (79-175)||(38985979-38986075)
chr2 (98-194)||(38986802-38986898)
chr2 (269-335)||(863416-863482)
chr2 (79-181)||(27059166-27059267)
chr2 (79-181)||(27059977-27060079)
chr2 (79-175)||(24429608-24429703)
chr2 (79-133)||(2868668-2868721)
chr2 (79-149)||(8911833-8911903)
chr2 (292-325)||(2054888-2054921)
chr2 (79-149)||(42849495-42849565)
chr2 (79-119)||(20203327-20203367)
[»] chr7 (35 HSPs)
chr7 (94-289)||(24306963-24307158)
chr7 (79-289)||(42489828-42490038)
chr7 (79-289)||(30002414-30002624)
chr7 (79-289)||(36783749-36783958)
chr7 (79-289)||(37706178-37706387)
chr7 (79-263)||(30469320-30469503)
chr7 (79-263)||(32022544-32022728)
chr7 (92-289)||(30468695-30468889)
chr7 (79-263)||(32021212-32021395)
chr7 (79-263)||(36784396-36784580)
chr7 (94-263)||(24306353-24306522)
chr7 (79-263)||(30001793-30001976)
chr7 (98-263)||(42489222-42489387)
chr7 (269-375)||(30468900-30469005)
chr7 (269-375)||(24306847-24306952)
chr7 (269-375)||(30002298-30002403)
chr7 (269-375)||(42489712-42489817)
chr7 (79-181)||(30470970-30471071)
chr7 (269-331)||(37706105-37706167)
chr7 (269-375)||(32022114-32022219)
chr7 (269-375)||(36783969-36784074)
chr7 (177-251)||(26928582-26928656)
chr7 (104-181)||(30470127-30470204)
chr7 (18-76)||(229478-229536)
chr7 (79-151)||(21415389-21415461)
chr7 (79-177)||(3219294-3219391)
chr7 (79-149)||(30659844-30659914)
chr7 (79-149)||(31179915-31179985)
chr7 (79-149)||(43334119-43334189)
chr7 (78-149)||(38059835-38059906)
chr7 (79-149)||(3162858-3162928)
chr7 (79-149)||(3163494-3163563)
chr7 (259-289)||(32022073-32022103)
chr7 (81-119)||(46428145-46428183)
chr7 (79-140)||(8513469-8513530)
[»] chr1 (36 HSPs)
chr1 (94-289)||(24081458-24081653)
chr1 (79-289)||(48644687-48644897)
chr1 (91-289)||(51661213-51661411)
chr1 (79-288)||(39870052-39870261)
chr1 (90-289)||(23173897-23174095)
chr1 (94-289)||(31151290-31151485)
chr1 (93-277)||(23601739-23601923)
chr1 (79-263)||(31150667-31150851)
chr1 (94-263)||(23173288-23173457)
chr1 (97-263)||(39870693-39870859)
chr1 (79-263)||(48577438-48577621)
chr1 (79-263)||(51660592-51660774)
chr1 (89-246)||(24082096-24082253)
chr1 (170-289)||(18249168-18249287)
chr1 (236-375)||(23602233-23602371)
chr1 (79-216)||(23602367-23602505)
chr1 (269-375)||(23173780-23173886)
chr1 (269-375)||(18249021-18249126)
chr1 (269-375)||(24081664-24081769)
chr1 (269-375)||(51661097-51661202)
chr1 (269-336)||(39870273-39870340)
chr1 (79-181)||(4595540-4595642)
chr1 (94-181)||(40959736-40959823)
chr1 (269-375)||(31151174-31151279)
chr1 (94-181)||(4594710-4594797)
chr1 (94-181)||(40958891-40958978)
chr1 (97-177)||(50505366-50505446)
chr1 (78-149)||(21791478-21791548)
chr1 (79-149)||(5216550-5216620)
chr1 (79-119)||(14886141-14886181)
chr1 (79-183)||(16317541-16317645)
chr1 (79-149)||(21790739-21790809)
chr1 (84-162)||(44672106-44672184)
chr1 (79-119)||(5496534-5496574)
chr1 (79-119)||(17606252-17606292)
chr1 (269-297)||(48644648-48644676)
[»] scaffold0050 (1 HSPs)
scaffold0050 (79-263)||(8401-8584)
[»] scaffold1339 (1 HSPs)
scaffold1339 (79-183)||(1906-2009)
[»] scaffold0093 (2 HSPs)
scaffold0093 (79-181)||(21944-22046)
scaffold0093 (94-181)||(22732-22819)
[»] scaffold0009 (1 HSPs)
scaffold0009 (79-149)||(105500-105569)


Alignment Details
Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 79 - 375
Target Start/End: Complemental strand, 42419775 - 42419482
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||| ||||| ||||||||    
T  42419775 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcatttcatttaatccaaaggcttaaaact 42419677  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttc 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  42419676 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcattattaatttataatcaaacattccatttttatttc 42419577  T
Q  279 cccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatg 375  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||       ||||||| |||||| |||||||||||||||||    
T  42419576 cccaaatttataaattttccca-atttctataatcatactcaaactttttttctaaac-ttttttataaaatgaatggttgaactcatatacctatg 42419482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 79 - 375
Target Start/End: Original strand, 25478066 - 25478358
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  25478066 atatatatatggg-ttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaact 25478164  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttc 278  Q
    ||||| ||||||||||  |||||||||||||||| ||||   ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25478165 atcactaaattaattatcatacaccaaatactctatatc---taattgagaaacatatctatcatcattaatttataatcaaacattccatttttatttc 25478261  T
Q  279 cccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatatacctatg 375  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||| ||||    
T  25478262 cccaaatttataaattttcccatatttctataatcatactcaaacttcttttctaaagtttttttataaaatgaatggtagaactcatatacatatg 25478358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 79 - 289
Target Start/End: Original strand, 6784830 - 6785040
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  6784830 atatatatatagggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcatttcatttaatccaaaggtttaaaact 6784929  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttc 278  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6784930 atcaccaaattaattaatatacaccaaatattctctatcacctaattaagaaacatatctatcattattaatttataatcaaacattccatttttatttc 6785029  T
Q  279 cccaaatttat 289  Q
    |||||||||||    
T  6785030 cccaaatttat 6785040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 79 - 289
Target Start/End: Original strand, 19549451 - 19549661
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||| |||||||| ||||| ||||||||    
T  19549451 atatatatatagggttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcattttatttaatctaaaggcttaaaact 19549550  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttc 278  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19549551 atcaccaaattaattaatatacaccaaatactctctgtcacctaattaagaaaaatatctatcatcattaatttataatcaaacattccatttttatttc 19549650  T
Q  279 cccaaatttat 289  Q
    |||||||||||    
T  19549651 cccaaatttat 19549661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 94 - 289
Target Start/End: Original strand, 36854913 - 36855108
Alignment:
Q  94 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 193  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||| |||||||| ||||| |||||||||||||||||||||||    
T  36854913 taggatcaaatgacaccatggtgtcaaaattagtttgacatcaaatctcatcccttcattttatttaatccaaaggcttaaaactatcaccaaattaatt 36855012  T
Q  194 aatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttccccaaatttat 289  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  36855013 aatatacaccaaatactctctatcacttaattaagaaaaatatctatcatcattaatttataatcaaacattccatttttatttcctcaaatttat 36855108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 79 - 289
Target Start/End: Complemental strand, 12835241 - 12835032
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||| |||| ||||||| |||||||  ||| | ||||||||    
T  12835241 atatatatatggg-ttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatcccttcattttatttaattcaaatgcttaaaact 12835143  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttc 278  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12835142 gtcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaaaatatctatcatcattaatttataatcaaacattccatttttatttc 12835043  T
Q  279 cccaaatttat 289  Q
    |||||||||||    
T  12835042 cccaaatttat 12835032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 90 - 289
Target Start/End: Original strand, 18032757 - 18032956
Alignment:
Q  90 gggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaatt 189  Q
    |||||||||||||||||||||||||||||| |||||||||||||  |||||| |||| ||||||| |||||||| ||||| |||||||||||||||||||    
T  18032757 gggttaggatcaaatgacaccatggtgtcaaaattagtttgacacgaaatctcatcccttcattttatttaatccaaaggcttaaaactatcaccaaatt 18032856  T
Q  190 aattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttccccaaatttat 289  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  18032857 aattaatatacaccaaatactctctatcacttaattaagaaaaatatctatcatcattaatttataatcaaacattccatttttatttcctaaaatttat 18032956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 90 - 289
Target Start/End: Complemental strand, 50696981 - 50696782
Alignment:
Q  90 gggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaatt 189  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||| ||||||| |||||||| ||||  |||||||||||| ||||||    
T  50696981 gggttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatcccttcattttatttaatccaaagacttaaaactatcatcaaatt 50696882  T
Q  190 aattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttccccaaatttat 289  Q
    ||||||||||||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  50696881 aattaatatacaccaaatactttctatcacctatttaagaaaaatatctatgatcattaatttataatcaaacattccatttttatttccccaaatttat 50696782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 94 - 263
Target Start/End: Complemental strand, 19550277 - 19550108
Alignment:
Q  94 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 193  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  19550277 taggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaactatcaccaaattaatt 19550178  T
Q  194 aatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19550177 aacatacatcaaatactctctatcacctaattaagaaacatatctatcatcattaattcataatcaaaca 19550108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 79 - 270
Target Start/End: Original strand, 25236377 - 25236568
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||| ||||||||||||||||||| |||||||||| |||||||||||||  |||| |||||||||||||| |||||||| ||||| ||||||||    
T  25236377 atatatatatagggttaggatcaaatgacatcatggtgtcaaaattagtttgacactaaatattatccattcattttatttaatccaaaggcttaaaact 25236476  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatt 270  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  25236477 atcaccaaattaattaacatacaccaaatactctctatcacctaattaagaaacatatttatcatcgttattttataatcaaacattccatt 25236568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 79 - 261
Target Start/End: Original strand, 42418974 - 42419156
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||| |||| ||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  42418974 atatacatatagggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaact 42419073  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaa 261  Q
    ||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  42419074 atcaccaaattaattaacatacatcaaatactctctatcacttaattaagaaacatatatatcatcattaattcataatcaaa 42419156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 79 - 263
Target Start/End: Original strand, 12834408 - 12834592
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||| ||| |||||||||||||||| ||||||||| ||||||||||||| |||||  |||||||||||||||||||||| ||||| ||||||||    
T  12834408 atatatatatagggataggatcaaatgacactatggtgtcaaaattagtttgacaccaaattatatccattcatttcatttaatccaaaggcttaaaact 12834507  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12834508 atcaccaaattaattaacatacatcaaatactccctatcacctaattaagaaacatatctatcatcattaattcataatcaaaca 12834592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 79 - 263
Target Start/End: Complemental strand, 25478864 - 25478680
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||| ||||||||||||||||| | |||| ||||| ||||||||||||| ||||||||||| ||||||||||||||||| ||||| ||||||||    
T  25478864 atatatatatagggttaggatcaaatgatatcatgttgtcaaaattagtttgacaccaaatcttatctattcatttcatttaatccaaaggcttaaaact 25478765  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  25478764 atcaccaaattaattatcatacaccaaatactctctatcacttaattaagaaacatatctatcatcattaattcataatcaaaca 25478680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 79 - 263
Target Start/End: Complemental strand, 36855731 - 36855548
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||| ||||| ||||||||    
T  36855731 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatcaattcatttcatttaatccaaaggcttaaaact 36855633  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  36855632 atcaccaaattaattaacatacatcaaatactccctatcacctaattaagaaacatatctattatcattaattcataatcaaaca 36855548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 89 - 260
Target Start/End: Original strand, 50696183 - 50696354
Alignment:
Q  89 ggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaat 188  Q
    |||| ||||||||||||||||| |||||||| |||||||||||||  |||| ||||| ||||||||||||||||| ||||| |||||||||||| ||| |    
T  50696183 ggggataggatcaaatgacaccttggtgtcaaaattagtttgacactaaattttatcaattcatttcatttaatccaaaggcttaaaactatcatcaact 50696282  T
Q  189 taattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaa 260  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  50696283 taattaacatacatcaaatactctctatcacctaattaagaaacatatctatcatcattaattcataatcaa 50696354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 121 - 256
Target Start/End: Complemental strand, 29101848 - 29101713
Alignment:
Q  121 aattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaattaatatacaccaaatactctctatcacc 220  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||  |||||||||||||||||||||||    
T  29101848 aattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaactatcaccaaattaattaacttacaccaaatactctctatcacc 29101749  T
Q  221 taattaagaaacatatctatcatcattaatttataa 256  Q
    |||||||||||||||| ||||||| |||||||||||    
T  29101748 taattaagaaacatatttatcatcgttaatttataa 29101713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 12835021 - 12834954
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaac 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12835021 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaac 12834954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 50696771 - 50696704
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaac 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50696771 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaac 50696704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 269 - 375
Target Start/End: Original strand, 18032967 - 18033072
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||       ||||||| |||||| ||||||||||    
T  18032967 tttttatttccccaaatttataaattttttcagatttctataatcatactcaaacttcttttctaaac-ttttttataaaatgaatggttgaactcatat 18033065  T
Q  369 acctatg 375  Q
    |||||||    
T  18033066 acctatg 18033072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 269 - 375
Target Start/End: Original strand, 36855119 - 36855224
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||       ||||||| |||||| |||||| |||    
T  36855119 tttttatttccccaaatttataaattttttcagatttctataatcatactcaaacttcttttctaaac-ttttttataaaatgaatggttgaactcgtat 36855217  T
Q  369 acctatg 375  Q
    |||||||    
T  36855218 acctatg 36855224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 269 - 375
Target Start/End: Original strand, 19549672 - 19549777
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||       ||||||| |||||| ||||||||||    
T  19549672 tttttatttcctcaaatttataaattttctcagatttctataatcatattcaaacttcttttttaaac-ttttttataaaatgaatggttgaactcatat 19549770  T
Q  369 acctatg 375  Q
    |||||||    
T  19549771 acctatg 19549777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 131 - 289
Target Start/End: Complemental strand, 32383907 - 32383746
Alignment:
Q  131 acatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaattaatatacaccaaatactct-ctatcacctaatt-aag 228  Q
    ||||||||||| |||||||  |||||||||||| || |  ||||||||||||  || ||||||||||||||||||||| | | ||||||||||||| ||     
T  32383907 acatcaaatctcatccatttgtttcatttaatctaatgacttaaaactatcattaagttaattaatatacaccaaatattttcctatcacctaattaaaa 32383808  T
Q  229 aaacatatctatcatcattaatttataatcaaacattccattttta-tttccccaaatttat 289  Q
    |||||||| || |||||| |||| | |||||| |||||| |||||| ||||||| |||||||    
T  32383807 aaacatatttaccatcatcaattcaaaatcaatcattccctttttattttcccctaatttat 32383746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 46823337 - 46823403
Alignment:
Q  185 aaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatt 251  Q
    ||||||||||| |||||| ||||||| |||||||||||||| |||||||||||||||||||||||||    
T  46823337 aaattaattaacatacactaaatactgtctatcacctaattgagaaacatatctatcatcattaatt 46823403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 97 - 193
Target Start/End: Original strand, 13767497 - 13767593
Alignment:
Q  97 gatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 193  Q
    ||||||| ||||||||||||||| ||||| ||||||| |||| || || |||||  | ||||||||| ||||||||||| ||||||||||| |||||    
T  13767497 gatcaaaagacaccatggtgtcaaaattaatttgacaccaaaactaattcattcgatacatttaatccaaaggtttaaagctatcaccaaaataatt 13767593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 181
Target Start/End: Complemental strand, 13767787 - 13767686
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| | ||||||||||||||  || |||||| ||||||||||||| |||| || || |||||||| ||||||||  ||||||| ||||||    
T  13767787 atatatatatgggat-aggatcaaatgacaatatagtgtcaaaattagtttgacaccaaacctcattcattcattacatttaattcaaaggttaaaaact 13767689  T
Q  179 atc 181  Q
    |||    
T  13767688 atc 13767686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 263
Target Start/End: Original strand, 32383275 - 32383374
Alignment:
Q  166 aaggtttaaaactatcaccaaattaattaatatacaccaaatactctctat--cacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    |||| ||||||||||||| |||||| || | || ||||||||||||||| |  ||||||||||| ||||| || || ||||||||||| |||||||||||    
T  32383275 aaggcttaaaactatcactaaattatttcacatgcaccaaatactctctctaccacctaattaaaaaacacatttaccatcattaattcataatcaaaca 32383374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 163
Target Start/End: Complemental strand, 29004386 - 29004321
Alignment:
Q  98 atcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatc 163  Q
    |||||||||||||||| ||||| ||||||||||| |  |||| | |||||||||||||||||||||    
T  29004386 atcaaatgacaccatgatgtcaaaattagtttgatactaaatttcatccattcatttcatttaatc 29004321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 550386 - 550316
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataat-tagtttgacatcaaatcttatccat 148  Q
    |||||||||| ||| |||||||||||||||||||||||||| | |  | ||||||||||||||||| ||||    
T  550386 atatatatatagggataggatcaaatgacaccatggtgtcaaactaaattttgacatcaaatcttaaccat 550316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 45919500 - 45919561
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatc 140  Q
    |||||||||| ||| |||||||||||||||||| ||||||| | | | ||||||||||||||    
T  45919500 atatatatatagggataggatcaaatgacaccaaggtgtcaaattaaatttgacatcaaatc 45919561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 21825214 - 21825174
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtca 119  Q
    ||||||||||  || ||||||||||||||||||||||||||    
T  21825214 atatatatatatggataggatcaaatgacaccatggtgtca 21825174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 209; Significance: 1e-114; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 100 - 336
Target Start/End: Original strand, 5114213 - 5114449
Alignment:
Q  100 caaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaattaatata 199  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5114213 caaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggtttaaaactatcaccaaattaattaatata 5114312  T
Q  200 caccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttccccaaatttataaattttccc 299  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  5114313 caccaaatactctctatcacctaattaataaacatatatatcatcattaatttataatcaaacattccatttttatttccccaaatttataaatttttcc 5114412  T
Q  300 agatttctataatcatactcaaacttcttttctaaac 336  Q
    | |||||||||||||||||||||||||||||||||||    
T  5114413 atatttctataatcatactcaaacttcttttctaaac 5114449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 79 - 289
Target Start/End: Complemental strand, 18969915 - 18969706
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| | ||||||||||||||||||||||||| |||||||||||||  |||||| || |||||||||||||||||| ||||||||||||||    
T  18969915 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacactaaatctcattcattcatttcatttaatccaaaggtttaaaact 18969817  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttc 278  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18969816 atcaccaaattaattaatatacaccacatactctctatcacctaattaagaatcatatctatcatcattaatttataatcaaacattccatttttatttc 18969717  T
Q  279 cccaaatttat 289  Q
     ||||||||||    
T  18969716 tccaaatttat 18969706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 89 - 289
Target Start/End: Complemental strand, 34713414 - 34713214
Alignment:
Q  89 ggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaat 188  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||    
T  34713414 ggggttagaatcaaatgacaccatggtgtcaaaattagtttgacatcaaatcttattcattcatttcatttaattgaaaggtttaaaactatcatcaaat 34713315  T
Q  189 taattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttccccaaattta 288  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||| |||||||||    
T  34713314 taattaatatacacaaaatactctctatcacctaattaagaaacatatttatcatcgttaatttataatcaaacatttcatttttatttctccaaattta 34713215  T
Q  289 t 289  Q
    |    
T  34713214 t 34713214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 110 - 289
Target Start/End: Original strand, 24063039 - 24063218
Alignment:
Q  110 catggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaattaatatacaccaaatac 209  Q
    ||||||| || ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  24063039 catggtgacaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggtttaaaactatcaccaaattaattaatatacaccaaatat 24063138  T
Q  210 tctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttccccaaatttat 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24063139 tctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacatttcatttttatttccccaaatttat 24063218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 93 - 263
Target Start/End: Complemental strand, 24063830 - 24063660
Alignment:
Q  93 ttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaat 192  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||    
T  24063830 ttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttgatttaatccaaaggcttaaaactatcaccaaattaat 24063731  T
Q  193 taatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24063730 taacatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaattcataatcaaaca 24063660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 79 - 263
Target Start/End: Original strand, 18969100 - 18969284
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||  ||||||||    
T  18969100 atatatatatagggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaagacttaaaact 18969199  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    || |||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||    
T  18969200 ataaccaaattaattaacatacatcaaatactctctatcacctcattaagaaacatatctatcattattaattcataatcaaaca 18969284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 34713203 - 34713097
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| |||||||||| ||||||    
T  34713203 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaactttttttataaaatgaatggtagaattcatat 34713104  T
Q  369 acctatg 375  Q
    |||||||    
T  34713103 acctatg 34713097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 269 - 375
Target Start/End: Original strand, 24063229 - 24063335
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||       ||||||| |||||||||||||||||    
T  24063229 tttttatttccccaaatttataaattttcccatatttctataatcatactcaaacttattttcaaaactttttttataaaatgaatggtagaactcatat 24063328  T
Q  369 acctatg 375  Q
    |||||||    
T  24063329 acctatg 24063335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 79 - 181
Target Start/End: Original strand, 1370149 - 1370250
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||  ||||||||  ||||||||||||||    
T  1370149 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcatcacatttaattcaaaggtttaaaact 1370247  T
Q  179 atc 181  Q
    |||    
T  1370248 atc 1370250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 79 - 175
Target Start/End: Complemental strand, 1371119 - 1371023
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaa 175  Q
    ||||||||||  || |||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||  |||||||| |||||||||||    
T  1371119 atatatatatatggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcattatatttaatccaaaggtttaaa 1371023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 98 - 163
Target Start/End: Complemental strand, 10789030 - 10788965
Alignment:
Q  98 atcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatc 163  Q
    |||||||||||  ||||||||| ||||||||||||||||||||| || ||||| ||||||||||||    
T  10789030 atcaaatgacaatatggtgtcaaaattagtttgacatcaaatctcatacattcgtttcatttaatc 10788965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 32907431 - 32907486
Alignment:
Q  94 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 149  Q
    |||||||||||||||||||||||||| | ||| ||||||| ||||||||| |||||    
T  32907431 taggatcaaatgacaccatggtgtcaaatttaatttgacaccaaatcttaaccatt 32907486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 4620870 - 4620944
Alignment:
Q  97 gatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtt 171  Q
    |||||||||| || ||| ||| | |||| |||||||||||||||| |||||||||||  |||||||| |||||||    
T  4620870 gatcaaatgatactatgatgttaaaatttgtttgacatcaaatctcatccattcattatatttaatccaaaggtt 4620944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 263
Target Start/End: Complemental strand, 5121411 - 5121369
Alignment:
Q  221 taattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    |||||||||||||||| |||||||||||||| |||||||||||    
T  5121411 taattaagaaacatatatatcatcattaattcataatcaaaca 5121369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 149
Target Start/End: Complemental strand, 18649964 - 18649895
Alignment:
Q  80 tatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 149  Q
    ||||||||| ||| |||||||||||||||||||||||||| | | | ||||||| |||||| || |||||    
T  18649964 tatatatatagggataggatcaaatgacaccatggtgtcaaattaaatttgacaccaaatcataaccatt 18649895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 8992896 - 8992936
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtca 119  Q
    |||||||||| ||| ||||||||||||||||||||||||||    
T  8992896 atatatatatagggataggatcaaatgacaccatggtgtca 8992936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 9017343 - 9017383
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtca 119  Q
    |||||||||| ||| ||||||||||||||||||||||||||    
T  9017343 atatatatatagggataggatcaaatgacaccatggtgtca 9017383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 18969681 - 18969649
Alignment:
Q  302 atttctataatcatactcaaacttcttttctaa 334  Q
    |||||||||||||||||||||||| ||||||||    
T  18969681 atttctataatcatactcaaactttttttctaa 18969649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 35073473 - 35073373
Alignment:
Q  83 atatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatca 182  Q
    |||||| ||| || |||||||||||| || ||||||| | | | | ||||| ||||||||||||||| | || |||||| | ||||| ||||||| ||||    
T  35073473 atatatagggataagatcaaatgacatcaaggtgtcaaattaaatgtgacaccaaatcttatccatttaatttatttaacccaaaggcttaaaacaatca 35073374  T
Q  183 c 183  Q
    |    
T  35073373 c 35073373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 79 - 289
Target Start/End: Complemental strand, 16303455 - 16303245
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||| ||||||||||||||||||| |||||||||| ||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  16303455 atatatatatagggttaggatcaaatgacatcatggtgtcaaaattagtttgacaccaaatctcatccattcatttcatttaatccaaaggtttaaaact 16303356  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttc 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16303355 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttc 16303256  T
Q  279 cccaaatttat 289  Q
    |||||||||||    
T  16303255 cccaaatttat 16303245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 79 - 289
Target Start/End: Complemental strand, 46889332 - 46889122
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  46889332 atatatatatagggttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcatttcatttaatccaaaggtttaaaact 46889233  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttc 278  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  46889232 atcatcaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttt 46889133  T
Q  279 cccaaatttat 289  Q
    |||||||||||    
T  46889132 cccaaatttat 46889122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 46914962 - 46915170
Alignment:
Q  80 tatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaacta 179  Q
    |||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||    
T  46914962 tatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcatttcatttaatccaaaggtttaaaacta 46915060  T
Q  180 tcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttcc 279  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  46915061 tcaccaaattaattaatatacaccaaatactctctatcacataattaagaaatatatctatcattattaatttataatcaaacattccatttttatttcc 46915160  T
Q  280 ccaaatttat 289  Q
    ||||||||||    
T  46915161 ccaaatttat 46915170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 50802653 - 50802445
Alignment:
Q  80 tatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaacta 179  Q
    |||||||||||| | |||||||| |||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||    
T  50802653 tatatatatgggat-aggatcaattgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcatttcatttaatccaaaggtttaaaacta 50802555  T
Q  180 tcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttcc 279  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  50802554 tcaccaaattaattaatatacaccaaatattctctatcacctaattaagaaacatatctatcattattaatttataatcaaacattccatttttatttcc 50802455  T
Q  280 ccaaatttat 289  Q
    ||||||||||    
T  50802454 ccaaatttat 50802445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 50873224 - 50873432
Alignment:
Q  80 tatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaacta 179  Q
    |||||||||||| | |||||||| |||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||    
T  50873224 tatatatatgggat-aggatcaattgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcatttcatttaatccaaaggtttaaaacta 50873322  T
Q  180 tcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttcc 279  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  50873323 tcaccaaattaattaatatacaccaaatattctctatcacctaattaagaaacatatctatcattattaatttataatcatacattccatttttatttcc 50873422  T
Q  280 ccaaatttat 289  Q
    ||||||||||    
T  50873423 ccaaatttat 50873432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 97 - 289
Target Start/End: Original strand, 37986421 - 37986613
Alignment:
Q  97 gatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaattaat 196  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  37986421 gatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcatttcatttaatccaaaggtttaaaactatcaccaaattaattaat 37986520  T
Q  197 atacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttccccaaatttat 289  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  37986521 atacaacaaatactctctatcacctaattaagaaacatatctatcattattaaattataatcaaacattccatttttatttccccaaatttat 37986613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 94 - 263
Target Start/End: Complemental strand, 37987223 - 37987054
Alignment:
Q  94 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 193  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||    
T  37987223 taggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatctaaaggcttaaaactatcaccaaattagtt 37987124  T
Q  194 aatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  37987123 aatatacaccaaatattctctatcacctaattaagaaacatatctatcatcattaattcataatcaaaca 37987054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 79 - 263
Target Start/End: Original strand, 16302623 - 16302806
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||    
T  16302623 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaattttatccattcatttcatttaatccaaaggcttaaaact 16302721  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16302722 atcaccaaattaattaacatacatcaaatactctctatcacctaattaagaaacatatctatcatcattaattcataatcaaaca 16302806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 79 - 263
Target Start/End: Complemental strand, 46915791 - 46915608
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  46915791 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaact 46915693  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  46915692 atcaccaaattaattaacatacatcaaatattctctatcacctaattaagaaacatatttatcatcattaattcataatcaaaca 46915608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 94 - 263
Target Start/End: Original strand, 46888480 - 46888649
Alignment:
Q  94 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 193  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  46888480 taggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaactatcaccaaattaatt 46888579  T
Q  194 aatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    || ||||| |||||| |||||||||||||||||||||||||||  ||||||||||||| |||||||||||    
T  46888580 aacatacatcaaatattctctatcacctaattaagaaacatattcatcatcattaattcataatcaaaca 46888649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 79 - 263
Target Start/End: Original strand, 50801822 - 50802006
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||| ||| || ||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||  ||||||||||||||    
T  50801822 atatatatatagggatatgatcaaatgacaccatggtgtcaaaattagtttgacaccgaatcttatccattcatttcatttaattcaaaggtttaaaact 50801921  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||||||||||||||  ||||| |||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  50801922 atcaccaaattaattatgatacatcaaatactctatatcacctaattaagaaatatatctatcatcattaattcataatcaaaca 50802006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 79 - 263
Target Start/End: Complemental strand, 50874058 - 50873874
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||| ||| || ||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||  ||||||||||||||    
T  50874058 atatatatatagggatatgatcaaatgacaccatggtgtcaaaattagtttgacaccgaatcttatccattcatttcatttaattcaaaggtttaaaact 50873959  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||||||||||||||  ||||| |||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  50873958 atcaccaaattaattatgatacatcaaatactctatatcacctaattaagaaatatatctatcatcattaattcataatcaaaca 50873874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 94 - 263
Target Start/End: Complemental strand, 13644172 - 13644003
Alignment:
Q  94 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 193  Q
    ||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  13644172 taggatcaaatgataccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaactatcaccaaattaatt 13644073  T
Q  194 aatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    || || || ||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||    
T  13644072 aacatgcatcaaatactctctatcacctaattaagaaatatatttatcatcattaattcataatcaaaca 13644003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 177 - 286
Target Start/End: Complemental strand, 18346999 - 18346890
Alignment:
Q  177 ctatcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatt 276  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||    
T  18346999 ctatcaccaaattaattaacatacatcaaatactctctatcacctaattaagaaacatatttatcatcattaattcataatcaaacattctatttttatt 18346900  T
Q  277 tccccaaatt 286  Q
    ||||| ||||    
T  18346899 tcccctaatt 18346890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 127 - 227
Target Start/End: Complemental strand, 18347085 - 18346985
Alignment:
Q  127 tttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaattaatatacaccaaatactctctatcacctaatta 226  Q
    ||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||    
T  18347085 tttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaactatcaccaaattaattaacatacatcaaatactctctatcaccaaatta 18346986  T
Q  227 a 227  Q
    |    
T  18346985 a 18346985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 16303234 - 16303129
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       ||||||| |||||| ||||||||||    
T  16303234 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaactttttttctaaac-ttttttataaaatgaatggttgaactcatat 16303136  T
Q  369 acctatg 375  Q
    |||||||    
T  16303135 acctatg 16303129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 269 - 374
Target Start/End: Original strand, 37986624 - 37986728
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       ||||||| |||||| ||||||||||    
T  37986624 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaactttttttctaaac-ttttttataaaatgaatggttgaactcatat 37986722  T
Q  369 acctat 374  Q
    ||||||    
T  37986723 acctat 37986728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 50802434 - 50802329
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||       |||||||||||||| ||||||||||    
T  50802434 tttttatttccccaaatttataaattttcccatatttatataatcatactcaaactttttttctaaac-ttttttataaaataaatggttgaactcatat 50802336  T
Q  369 acctatg 375  Q
    |||||||    
T  50802335 acctatg 50802329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 269 - 375
Target Start/End: Original strand, 50873443 - 50873548
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||       |||||||||||||| ||||||||||    
T  50873443 tttttatttccccaaatttataaattttcccatatttatataatcatactcaaactttttttctaaac-ttttttataaaataaatggttgaactcatat 50873541  T
Q  369 acctatg 375  Q
    |||||||    
T  50873542 acctatg 50873548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 46889080 - 46888974
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaac-ttcttttctaaacnnnnnnnataaaataaatggtagaactcata 367  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||       ||||||| |||||| |||||||||    
T  46889080 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttttttttctaaac-ttttttataaaatgaatggttgaactcata 46888982  T
Q  368 tacctatg 375  Q
    ||||||||    
T  46888981 tacctatg 46888974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 94 - 194
Target Start/End: Complemental strand, 16854694 - 16854594
Alignment:
Q  94 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 193  Q
    ||||||||||||||| |||||||||| ||||||||||||| ||||||| ||||||||||  ||||||||| |||||||||||||||||  |||| |||||    
T  16854694 taggatcaaatgacatcatggtgtcaaaattagtttgacaccaaatctcatccattcatcacatttaatccaaaggtttaaaactatctacaaaataatt 16854595  T
Q  194 a 194  Q
    |    
T  16854594 a 16854594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 46915181 - 46915248
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaac 336  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||    
T  46915181 tttttatttccccaaatttattaattttcccagatttctataatcatattcaaactttttttctaaac 46915248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 183
Target Start/End: Complemental strand, 7253315 - 7253229
Alignment:
Q  97 gatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcac 183  Q
    ||||||||||||||||||||||| | | | | ||||| ||||||||||||||| | ||  ||||||| ||||| ||||||| |||||    
T  7253315 gatcaaatgacaccatggtgtcaaattaaatgtgacaccaaatcttatccatttaatttgtttaatccaaaggcttaaaacaatcac 7253229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 54584945 - 54584877
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccat 148  Q
    ||||||||||||| | ||||||||||||||||||||||||| | | | ||| ||||||||||||| ||||    
T  54584945 atatatatatgggat-aggatcaaatgacaccatggtgtcaaactaaatttaacatcaaatcttaaccat 54584877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 149
Target Start/End: Original strand, 53948651 - 53948719
Alignment:
Q  81 atatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 149  Q
    |||||||| ||| |||||||||||||||||||||||||| | | | ||||||| |||||| || |||||    
T  53948651 atatatatagggataggatcaaatgacaccatggtgtcaaattaaatttgacaccaaatcataaccatt 53948719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 20200675 - 20200605
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 149  Q
    |||||||||| ||| |||||||||||||||||| ||||||| | | | ||||||| |||||| || |||||    
T  20200675 atatatatatagggataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcctagccatt 20200605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 20202859 - 20202789
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 149  Q
    |||||||||| ||| |||||||||||||||||| ||||||| | | | ||||||| |||||| || |||||    
T  20202859 atatatatatagggataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcctagccatt 20202789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 53950144 - 53950074
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 149  Q
    |||||||||| ||| |||||||||||||||||| ||||||| | | | ||||||| |||||| || |||||    
T  53950144 atatatatatagggataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcctagccatt 53950074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 184; Significance: 2e-99; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 79 - 306
Target Start/End: Original strand, 15883155 - 15883382
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  15883155 atatatatatagggttaggatcaaatgacatcatggtgtcaaaattagtttgacatcaaatcttatccattcatttcatttaatccaaaggcttaaaact 15883254  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttc 278  Q
    ||||| ||||||||||  |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15883255 atcacgaaattaattatcatacaccaaatactctctatcatctaattgagaaacatatctatcatcattaatttataatcaaacattccatttttatttc 15883354  T
Q  279 cccaaatttataaattttcccagatttc 306  Q
    |||||||||||||||||||||| |||||    
T  15883355 cccaaatttataaattttcccatatttc 15883382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 90 - 289
Target Start/End: Complemental strand, 25836665 - 25836466
Alignment:
Q  90 gggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaatt 189  Q
    |||||||||||||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  25836665 gggttaggatcaaatgacaccatggtgtcaaaattattttgacaccaaatctcatccattcatttcatttaatctaaaggtttaaaactatcaccaaatt 25836566  T
Q  190 aattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttccccaaatttat 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25836565 aattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttccccaaatttat 25836466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 79 - 375
Target Start/End: Complemental strand, 3259873 - 3259568
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||| |||||||| ||||| ||||||||    
T  3259873 atatatatatggg-ttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcattttatttaatccaaaggcttaaaact 3259775  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttc 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3259774 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaaaatatctatcatcattaatttataatcaaacattccatttttatttc 3259675  T
Q  279 cccaaattta-----------taaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcata 367  Q
    ||||||||||           |  |||| |||| ||||||||||||||| |||||||||||||||||||       ||||||| |||| | |||||||||    
T  3259674 cccaaatttatttgttcctcttttatttccccaaatttctataatcatattcaaacttcttttctaaac-ttttttataaaatgaatgtttgaactcata 3259576  T
Q  368 tacctatg 375  Q
    ||||||||    
T  3259575 tacctatg 3259568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 90 - 289
Target Start/End: Complemental strand, 9918538 - 9918339
Alignment:
Q  90 gggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaatt 189  Q
    |||||||||||||||||||||||||||||| ||||||||||||| || |||| ||||||||||||||||||||| |||||||| ||||||||||||||||    
T  9918538 gggttaggatcaaatgacaccatggtgtcaaaattagtttgacaccatatctcatccattcatttcatttaatccaaaggtttgaaactatcaccaaatt 9918439  T
Q  190 aattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttccccaaatttat 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9918438 aattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttccccaaatttat 9918339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 79 - 289
Target Start/End: Complemental strand, 4737870 - 4737659
Alignment:
Q  79 atatatatatggg-gttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaac 177  Q
    ||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||| ||||||| |||||||||||| |||||||| ||||| |||||||    
T  4737870 atatatatatgggtgttaggatcaaatgacaccatgatgtcaaaattagtttgacaccaaatctcatccattcattttatttaatccaaaggcttaaaac 4737771  T
Q  178 tatcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttattt 277  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4737770 tatcaccaaattaattaatatataccaaatactctctatcacctaattaagaaaaatatctatcatcattaatttataatcaaacattccatttttattt 4737671  T
Q  278 ccccaaatttat 289  Q
    ||||||||||||    
T  4737670 ccccaaatttat 4737659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 79 - 289
Target Start/End: Original strand, 14480738 - 14480948
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||| ||| || ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||  ||||| ||| ||||    
T  14480738 atatatatatagggatatgatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaattcaaaggcttagaact 14480837  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttc 278  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14480838 atcaccaaattaattaatatacaccaaatactctctatcacttaattaagaaaaatatctatcatcattaatttataatcaaacattccatttttatttc 14480937  T
Q  279 cccaaatttat 289  Q
    | |||||||||    
T  14480938 ctcaaatttat 14480948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 79 - 289
Target Start/End: Original strand, 490903 - 491114
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgt--cataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaa 176  Q
    ||||||||||||| | | |||||||||||||||||||||  || ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||    
T  490903 atatatatatgggat-atgatcaaatgacaccatggtgtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaa 491001  T
Q  177 ctatcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatt 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  491002 ctatcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaaaatatctatcatcattaatttataatcaaacattccatttttatt 491101  T
Q  277 tccccaaatttat 289  Q
    ||| |||||||||    
T  491102 tcctcaaatttat 491114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 94 - 289
Target Start/End: Complemental strand, 10394915 - 10394720
Alignment:
Q  94 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 193  Q
    |||||| ||||||||||||||||||| ||||||||||||| ||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  10394915 taggataaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatctattcatttcatttaatccaaaggtttaaaactatcaccaaattaatt 10394816  T
Q  194 aatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttccccaaatttat 289  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  10394815 aatatacaccaaatactctctatcacctaattaaaaaacatatctatcattattaatttataatcaaacattctatttttatttccccaaatttat 10394720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 79 - 263
Target Start/End: Complemental strand, 492201 - 492018
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  492201 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaact 492103  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  492102 atcaccaaattaattaacatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaattcataatcaaaca 492018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 79 - 263
Target Start/End: Complemental strand, 14481525 - 14481342
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  14481525 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaact 14481427  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14481426 atcaccaaattaattaacatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaattcataatcaaaca 14481342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 90 - 289
Target Start/End: Original strand, 12281107 - 12281306
Alignment:
Q  90 gggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaatt 189  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||| |||| ||||||| |||||||| ||||| |||||||||| ||||||||    
T  12281107 gggttatgatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatcctttcattttatttaatccaaaggcttaaaactataaccaaatt 12281206  T
Q  190 aattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttccccaaatttat 289  Q
    |||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12281207 aattaatatacatcaaatactctctaccacctaattaagaaaaatatctatcatcattaatttataaccaaacattccatttttatttccccaaatttat 12281306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 90 - 289
Target Start/End: Original strand, 15915084 - 15915283
Alignment:
Q  90 gggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaatt 189  Q
    ||||||||||||||||||| |||||||||| ||||| ||||||| ||||||| |||| ||||||| |||||||| ||| | |||||||||||||||||||    
T  15915084 gggttaggatcaaatgacatcatggtgtcaaaattaatttgacaccaaatctcatcctttcattttatttaatccaaaagcttaaaactatcaccaaatt 15915183  T
Q  190 aattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttccccaaatttat 289  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15915184 aattaatatacaccaaatactctctatcacctaattaaaaaaaatatctatcatcattaatttataatcaaacattccatttttatttcctcaaatttat 15915283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 79 - 277
Target Start/End: Complemental strand, 36038651 - 36038453
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||  ||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||| |||||||| ||| | ||||||||    
T  36038651 atatatatatatggttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatattatccattcatttaatttaatccaaaagcttaaaact 36038552  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttattt 277  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| || ||||||    
T  36038551 atcaccaaattaattaacatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaattcataatcaaacaatcccttcttattt 36038453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 79 - 263
Target Start/End: Original strand, 3259062 - 3259245
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  3259062 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaact 3259160  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  3259161 atcaccaaattaattaacatacatcaaatactctctatcacctaattaagaaacatatatatcatcattaattcataatcaaaca 3259245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 94 - 263
Target Start/End: Original strand, 9917733 - 9917902
Alignment:
Q  94 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 193  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  9917733 taggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaactatcaccaaattaatt 9917832  T
Q  194 aatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    || ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  9917833 aacatacatcaaatactctctatcacataattaagaaacatatctatcatcattaattcataatcaaaca 9917902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 94 - 263
Target Start/End: Complemental strand, 15915866 - 15915697
Alignment:
Q  94 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 193  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  15915866 taggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaactatcaccaaattaatt 15915767  T
Q  194 aatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    || ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15915766 aacatacatcaaatactccctatcacctaattaagaaacatatctatcatcattaattcataatcaaaca 15915697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 97 - 263
Target Start/End: Original strand, 25835861 - 25836027
Alignment:
Q  97 gatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaattaat 196  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||     
T  25835861 gatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaactatcatcaaattaattaac 25835960  T
Q  197 atacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25835961 atacatcaaatactctctatcacctaattaagaaacatatctatcatcattaattcataatcaaaca 25836027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 79 - 263
Target Start/End: Original strand, 4737034 - 4737218
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||  || || ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  4737034 atatatatatatggataagatcaaatgacaccatggtgtcaaaataagtttgacatcaaatcttatccattcatttcatttaatccaaaggcttaaaact 4737133  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||    
T  4737134 atcaccaaattaattaacatacatcaaatactctctatcacctaattatgaaacttatctatcatcattaattcataatcaaaca 4737218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 97 - 263
Target Start/End: Original strand, 10394112 - 10394278
Alignment:
Q  97 gatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaattaat 196  Q
    ||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||     
T  10394112 gatcaaatgacaccatggtgtcaaaattaatttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaactatcaccaaattaattaac 10394211  T
Q  197 atacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  10394212 atacatcaaatactctctattacctaattaagaaacatatctatcatcattaattcataatcaaaca 10394278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 108 - 263
Target Start/End: Complemental strand, 12281900 - 12281745
Alignment:
Q  108 accatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaattaatatacaccaaat 207  Q
    |||||||||||| ||||||||||||| |||||||||| |||||||||||||||||| ||||| ||| ||||||||||||||||||||| ||||| |||||    
T  12281900 accatggtgtcaaaattagtttgacaccaaatcttattcattcatttcatttaatccaaaggcttagaactatcaccaaattaattaacatacatcaaat 12281801  T
Q  208 actctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12281800 actctctatcacctaattaagatacatatctatcatcattaatttataatcaaaca 12281745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 269 - 375
Target Start/End: Original strand, 12281317 - 12281422
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| |||||| ||||||||||    
T  12281317 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaac-ttttttataaaatgaatggttgaactcatat 12281415  T
Q  369 acctatg 375  Q
    |||||||    
T  12281416 acctatg 12281422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 4737648 - 4737543
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||| |||||| ||||||||||    
T  4737648 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttccaaac-ttttttataaaatgaatggttgaactcatat 4737550  T
Q  369 acctatg 375  Q
    || ||||    
T  4737549 acatatg 4737543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 15915294 - 15915361
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaac 336  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15915294 tttttattttcccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaac 15915361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 269 - 335
Target Start/End: Complemental strand, 10394709 - 10394643
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10394709 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaactttttttctaaa 10394643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 269 - 371
Target Start/End: Complemental strand, 25836455 - 25836354
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||       ||||||| |||||| ||||||||||    
T  25836455 tttttatttccccaaatttataaattttcctagatttctataatcatactcaaactttttttctaaac-ttttttataaaatgaatggttgaactcatat 25836357  T
Q  369 acc 371  Q
    |||    
T  25836356 acc 25836354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 9918328 - 9918225
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||       ||||||| |||||| ||||||||||    
T  9918328 tttttatttccccaaatttataaattttcccagatttctataatcatactc--actttttttctaaac-ttttttataaaatgaatggttgaactcatat 9918232  T
Q  369 acctatg 375  Q
    | |||||    
T  9918231 atctatg 9918225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 375
Target Start/End: Original strand, 491125 - 491232
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctat--aatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcat 366  Q
    |||||||||||||| ||||||| ||||||||||||||||||  |||||||||||||||| ||||||||||       ||||||| |||||| ||||||||    
T  491125 tttttatttccccatatttatatattttcccagatttctataaaatcatactcaaacttattttctaaac-ttttttataaaatgaatggttgaactcat 491223  T
Q  367 atacctatg 375  Q
    |||||||||    
T  491224 atacctatg 491232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 269 - 325
Target Start/End: Original strand, 14480959 - 14481017
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctat--aatcatactcaaactt 325  Q
    |||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  14480959 tttttatttccccaaatttatatattttcccagatttctataaaatcatactcaaactt 14481017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 23206261 - 23206191
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 149  Q
    |||||||||| ||| |||||||||||||||||| ||||||| | | | ||||||| |||||| || |||||    
T  23206261 atatatatatagggataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcctagccatt 23206191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 11768830 - 11768870
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtca 119  Q
    |||||||||| ||| ||||||||||||||| ||||||||||    
T  11768830 atatatatatagggataggatcaaatgacatcatggtgtca 11768870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 149
Target Start/End: Original strand, 21145927 - 21145995
Alignment:
Q  81 atatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 149  Q
    |||||||| ||| |||||||||||||||||| ||||||| | | | ||||||| |||||| || |||||    
T  21145927 atatatatagggataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcctagccatt 21145995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 183; Significance: 7e-99; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 79 - 289
Target Start/End: Complemental strand, 24023087 - 24022878
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  24023087 atatatatatggg-ttaggatcaaatgacaccatggtgtcaaaattagtttgacaacaaatctcatccattcatttcatttaatccaaaggtttaaaact 24022989  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttc 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24022988 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaagcatatctatcatcattaatttataatcaaacattccatttttatttc 24022889  T
Q  279 cccaaatttat 289  Q
    |||||||||||    
T  24022888 cccaaatttat 24022878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 91 - 289
Target Start/End: Original strand, 41272966 - 41273164
Alignment:
Q  91 ggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaatta 190  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||| |||| ||||||| |||||||  ||||| ||||||||||||||||||||    
T  41272966 ggttaggatcaaatgacaccatggtgttaaaattagtttgacatcaaatctcatcccttcattttatttaattcaaaggcttaaaactatcaccaaatta 41273065  T
Q  191 attaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttccccaaatttat 289  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41273066 attaatatacaccaaatactctctatcacctaattaagaaaaatatctatcatcattaatttataatcaaacattccatttttatttcctcaaatttat 41273164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 34654192 - 34654401
Alignment:
Q  80 tatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaacta 179  Q
    |||||||||  || |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||  |||||| ||    
T  34654192 tatatatataaggataggatcaaatgacaccatggtgtcaaaattagtttgacagcaaatcttatccattcatttcatttaatccaaagacttaaaatta 34654291  T
Q  180 tcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttcc 279  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34654292 tcaccaaattaattaatatacacaaaatactctctatcacctaattaaaaaaaatatctatcatcattaatttataatcaaacattccatttttatttcc 34654391  T
Q  280 ccaaatttat 289  Q
     |||||||||    
T  34654392 tcaaatttat 34654401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 79 - 263
Target Start/End: Original strand, 20054258 - 20054442
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| ||| | ||||||||| ||||||||||||| ||||| ||||||||    
T  20054258 atatatatatagggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaacttttatccatttatttcatttaatccaaaggcttaaaact 20054357  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  20054358 atcaccaaattaattaacatacatcaaatactctctatcacctaattaagaaacatatttatcatcattaattcataatcaaaca 20054442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 79 - 263
Target Start/End: Complemental strand, 34654984 - 34654805
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||   |||||| |||||||||| |||||||||||||||||| ||||  ||||||||    
T  34654984 atatatatatgggat-aggatcaaatgacaccatggtgtca-aatt---ttgacaccaaatcttattcattcatttcatttaatccaaagtcttaaaact 34654890  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34654889 atcaccaaattaattaacatacaccaaatactctttatcacctaattaagaaacatatctatcatcattaattcataatcaaaca 34654805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 94 - 263
Target Start/End: Complemental strand, 14763379 - 14763210
Alignment:
Q  94 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 193  Q
    |||||||||||||||  ||| ||||| ||| ||||||||| |||||||||||||||||||| |||||||| ||||| ||||| |||||||||||||||||    
T  14763379 taggatcaaatgacattatgatgtcaaaataagtttgacaccaaatcttatccattcattttatttaatctaaaggcttaaagctatcaccaaattaatt 14763280  T
Q  194 aatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14763279 aacatacatcaaatactctctatcacctaattaagaaacatatctatcatcattaattcataatcaaaca 14763210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 41273837 - 41273703
Alignment:
Q  93 ttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaat 192  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||| |||| ||||||| |||||||| ||||| ||||||||||||||||||||||    
T  41273837 ttaggatcaaatgacaccatggtgtcaaaattagtttgacattaaatctcatcccttcattttatttaatccaaaggcttaaaactatcaccaaattaat 41273738  T
Q  193 taatatacaccaaatactctctatcacctaattaa 227  Q
    ||||||||| |||||||||||||||||||||||||    
T  41273737 taatatacatcaaatactctctatcacctaattaa 41273703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 79 - 225
Target Start/End: Complemental strand, 20055048 - 20054903
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| | | ||||||||||||||||||||||| ||||||||| ||| | ||||| ||||||||||||||||||||| ||| ||||||||||    
T  20055048 atatatatatgggat-atgatcaaatgacaccatggtgtcaaaattagttttacagcgaatctcatccattcatttcatttaatccaaaagtttaaaact 20054950  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaatt 225  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||    
T  20054949 atcaccaaattaattaacatacaccaaatactatctatcacctaatt 20054903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 79 - 194
Target Start/End: Complemental strand, 3583708 - 3583593
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||  ||||||||| ||||||||||||||    
T  3583708 atatatatatagggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcatcacatttaatccaaaggtttaaaact 3583609  T
Q  179 atcaccaaattaatta 194  Q
    |||  |||| ||||||    
T  3583608 atccacaaaataatta 3583593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 79 - 194
Target Start/End: Complemental strand, 3583357 - 3583242
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||  ||||||||| ||||||||||||||    
T  3583357 atatatatatagggataggatcaaatgacaccatggtgtcaaaattaatttgacaccaaatctcatccattcatcacatttaatccaaaggtttaaaact 3583258  T
Q  179 atcaccaaattaatta 194  Q
    |||  |||| ||||||    
T  3583257 atctacaaaataatta 3583242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 41273175 - 41273242
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaac 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41273175 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaac 41273242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 79 - 181
Target Start/End: Original strand, 29267934 - 29268035
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||  ||||||||| ||||||||||||||    
T  29267934 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcatcacatttaatccaaaggtttaaaact 29268032  T
Q  179 atc 181  Q
    |||    
T  29268033 atc 29268035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 20054873 - 20054768
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       ||||||| |||||| ||||||||||    
T  20054873 tttttattttcccaaatttataaattttcccagatttctataatcatactcaaactttttttctaaac-ttttttataaaatgaatggttgaactcatat 20054775  T
Q  369 acctatg 375  Q
    |||||||    
T  20054774 acctatg 20054768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 41273438 - 41273333
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||       ||||||| |||||| ||||||||||    
T  41273438 tttttatttccccaaatttataaattttcccagatttctataatcacagtcaaacttcttttctaaac-ttttttataaaatgaatggttgaactcatat 41273340  T
Q  369 acctatg 375  Q
    |||||||    
T  41273339 acctatg 41273333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 224 - 289
Target Start/End: Complemental strand, 41273514 - 41273449
Alignment:
Q  224 ttaagaaacatatctatcatcattaatttataatcaaacattccatttttatttccccaaatttat 289  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  41273514 ttaagaaaaatatctatcatcattaatttataatcaaacattccatttttattttcccaaatttat 41273449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 79 - 175
Target Start/End: Complemental strand, 29268881 - 29268785
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaa 175  Q
    |||||||||| | | || ||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||  |||||||| |||||||||||    
T  29268881 atatatatatagagatatgatcaaatgacaccatggtgtcaaaattaatttgacatcaaatctcatccattcattatatttaatccaaaggtttaaa 29268785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 16846817 - 16846898
Alignment:
Q  94 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaa 175  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||  ||| |||  |||||||||||    
T  16846817 taggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcattatattcaattcaaaggtttaaa 16846898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 79 - 194
Target Start/End: Complemental strand, 16847738 - 16847624
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||| ||| |||||   ||||||||| ||| |||||||| |    
T  16847738 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatctattcaacacatttaatccaaatgtttaaaatt 16847640  T
Q  179 atcaccaaattaatta 194  Q
    |||  |||| ||||||    
T  16847639 atccacaaaataatta 16847624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 375
Target Start/End: Original strand, 34654412 - 34654519
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctat--aatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcat 366  Q
    |||||||||||||||||||||| ||||||||||||||||||  ||||| |||||||||| ||||||||||       ||||||| |||||| ||||||||    
T  34654412 tttttatttccccaaatttatatattttcccagatttctataaaatcacactcaaacttattttctaaac-ttttttataaaatgaatggttgaactcat 34654510  T
Q  367 atacctatg 375  Q
    |||||||||    
T  34654511 atacctatg 34654519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 3582422 - 3582518
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatt-tcatttaatcgaaaggtttaaa 175  Q
    ||||||||||||| | | |||||||||||| |||||||||| ||||||||||||| |||||||||| |||||||| | | |||||| |||||||||||    
T  3582422 atatatatatgggat-atgatcaaatgacatcatggtgtcaaaattagtttgacaccaaatcttattcattcattattaattaatccaaaggtttaaa 3582518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 79 - 174
Target Start/End: Original strand, 14754163 - 14754256
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaa 174  Q
    |||||||||| ||| || |||||||||||||  |||||||| ||||||||||||| ||||||| ||| |||||||  |||||||| |||| |||||    
T  14754163 atatatatatagggatatgatcaaatgacac--tggtgtcaaaattagtttgacaccaaatctaatctattcattatatttaatccaaagatttaa 14754256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 148
Target Start/End: Original strand, 10092908 - 10092977
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccat 148  Q
    |||||||||| ||| || ||||||||||| ||||||||||| | | | ||||||||||||||||| ||||    
T  10092908 atatatatatagggatatgatcaaatgacgccatggtgtcaaactaaatttgacatcaaatcttaaccat 10092977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 289
Target Start/End: Original strand, 14762764 - 14762797
Alignment:
Q  256 atcaaacattccatttttatttccccaaatttat 289  Q
    ||||||||||||||||||||||||||||||||||    
T  14762764 atcaaacattccatttttatttccccaaatttat 14762797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 14762813 - 14762857
Alignment:
Q  292 attttcccagatttctataatcatactcaaacttcttttctaaac 336  Q
    |||| |||| ||||||| |||||||||||||||||||||||||||    
T  14762813 atttccccaaatttctacaatcatactcaaacttcttttctaaac 14762857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 5881132 - 5881172
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtca 119  Q
    |||||||||| ||| |||||||||||||||||| |||||||    
T  5881132 atatatatatagggataggatcaaatgacaccaaggtgtca 5881172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 179; Significance: 2e-96; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 79 - 289
Target Start/End: Complemental strand, 2055147 - 2054937
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||| ||| |||||||||||||||||||||||||| |||||||||||||  |||||| ||||||||||||||||||||| ||||||||||||||    
T  2055147 atatatatatagggataggatcaaatgacaccatggtgtcaaaattagtttgacacaaaatctcatccattcatttcatttaatccaaaggtttaaaact 2055048  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttc 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2055047 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcattattaatttataatcaaacattccatttttatttc 2054948  T
Q  279 cccaaatttat 289  Q
    |||||||||||    
T  2054947 cccaaatttat 2054937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 92 - 289
Target Start/End: Original strand, 36150338 - 36150535
Alignment:
Q  92 gttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaa 191  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  36150338 gttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggtttaaaactataaccaaattaa 36150437  T
Q  192 ttaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttccccaaatttat 289  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36150438 ttaatatacaccaaatattctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttccccaaatttat 36150535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 79 - 289
Target Start/End: Original strand, 34452239 - 34452449
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||| ||||||| |||||||| ||| | ||||||||    
T  34452239 atatatatatagggttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatcccttcattttatttaatccaaatgcttaaaact 34452338  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttc 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  34452339 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaaaatatctatcatcattaatttataatcaaacattccatttttatttc 34452438  T
Q  279 cccaaatttat 289  Q
    |||||||||||    
T  34452439 cccaaatttat 34452449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 79 - 289
Target Start/End: Original strand, 863196 - 863405
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||| |||||||| ||||| ||||||||    
T  863196 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcattttatttaatccaaaggcttaaaact 863294  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttc 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  863295 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaaaatatctatcatcattaatttataatcaaacattccatttttatttc 863394  T
Q  279 cccaaatttat 289  Q
    | ||| |||||    
T  863395 ctcaattttat 863405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 90 - 289
Target Start/End: Original strand, 37875391 - 37875590
Alignment:
Q  90 gggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaatt 189  Q
    |||||||||||||||||||||||||||||| |||||||||||||  |||||| |||| ||||||| |||||||| ||||| |||||||||||||||||||    
T  37875391 gggttaggatcaaatgacaccatggtgtcaaaattagtttgacacgaaatctcatcccttcattttatttaatccaaaggcttaaaactatcaccaaatt 37875490  T
Q  190 aattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttccccaaatttat 289  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  37875491 aattaatatacaccaaatactctctatcacttaattaagaaaaatatctatcatcattaatttataatcaaacattccatttttatttcctaaaatttat 37875590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 79 - 263
Target Start/End: Complemental strand, 864028 - 863844
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  864028 atatatatatagggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaact 863929  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  863928 atcaccaaattaattaacatacatcaaatactctctatcacctaattaagaaacatatctatcatcattaattcataatcaaaca 863844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 79 - 263
Target Start/End: Complemental strand, 36151163 - 36150979
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||| | |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||  ||||||||    
T  36151163 atatatatatagagttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaagacttaaaact 36151064  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  36151063 atcaccaaattaattaacatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaattcataatcaaaca 36150979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 121 - 289
Target Start/End: Complemental strand, 27006407 - 27006239
Alignment:
Q  121 aattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaattaatatacaccaaatactctctatcacc 220  Q
    |||| |||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27006407 aatttgtttgataccaaatcttatccattcatttcatttaatcgaaagatttaaaactatcaccaaattaattaatatacacaaaatactctctatcacc 27006308  T
Q  221 taattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttccccaaatttat 289  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27006307 taattaagaaacatatttatcatcattaatttataatgaaacattccatttttatttccccaaatttat 27006239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 79 - 263
Target Start/End: Original strand, 2054345 - 2054528
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| | ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||    
T  2054345 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacactaaatcttatccattcatttcatttaatccaaaggtttaaaact 2054443  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||||||||||| ||| || || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2054444 atcaccaaattaagtaacatgcatcaaatactctctatcacctaattaagaaacatatctatcatcattaattcataatcaaaca 2054528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 129 - 289
Target Start/End: Original strand, 8043081 - 8043241
Alignment:
Q  129 tgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaattaatatacaccaaatactctctatcacctaattaag 228  Q
    ||||||||||| | ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8043081 tgacatcaaatttcatccattcatttcatttaatccaaaggtttaaaactatcatcaaattaattaatatacaccaaatactctctatcacctaattaag 8043180  T
Q  229 aaacatatctatcatcattaatttataatcaaacattccatttttatttccccaaatttat 289  Q
    ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8043181 aaatatatctatcattattaatttataatcaaacattccatttttatttccccaaatttat 8043241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 79 - 263
Target Start/End: Complemental strand, 34453071 - 34452888
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||  ||||| ||||||||    
T  34453071 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaattttatccattcatttcatttaattcaaaggcttaaaact 34452973  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34452972 atcaccaaattaattaacatacatcaaatactccctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 34452888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 79 - 257
Target Start/End: Complemental strand, 8043866 - 8043688
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  8043866 atatatatatagggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaact 8043767  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataat 257  Q
    || |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  8043766 attaccaaattaattaacatacatcaaatactctctatcacctaattaagaaacatatctataatcattaattcataat 8043688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 79 - 263
Target Start/End: Complemental strand, 37876215 - 37876030
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaat-cttatccattcatttcatttaatcgaaaggtttaaaac 177  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||| || |||| ||||||| |||||||| ||||| |||||||    
T  37876215 atatatatatagggttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaattctcatcccttcattttatttaatccaaaggcttaaaac 37876116  T
Q  178 tatcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    |||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  37876115 tatcaccaaattaattaacatacatcaaatactccctatcacctaattaagaaacatatctattatcattaattcataatcaaaca 37876030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 110 - 277
Target Start/End: Complemental strand, 7498344 - 7498176
Alignment:
Q  110 catggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaattaatatacaccaaatac 209  Q
    |||||||||| ||||| ||||||||||||||| ||||||||||||| ||||||  ||| |||||||| ||| |||||||||||||| ||| | |||||||    
T  7498344 catggtgtcaaaattactttgacatcaaatctcatccattcatttcttttaattcaaatgtttaaaattatgaccaaattaattaacatatatcaaatac 7498245  T
Q  210 tctctatcacctaattaagaaacatatctatcatcattaatt-tataatcaaacattccatttttattt 277  Q
    ||| |||||||||||||| ||||||||  ||||||||||||| |||||| |||||  || |||||||||    
T  7498244 tctttatcacctaattaaaaaacatattaatcatcattaattatataattaaacaacccctttttattt 7498176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 79 - 212
Target Start/End: Complemental strand, 39830866 - 39830738
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| |||| ||||||||||||    |||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  39830866 atatatatatggg-ttagaatcaaatgacac----gtgtcaaaattaatttgacatcaaatcttatccattcatttcatttaatccaaaggtttaaaact 39830772  T
Q  179 atcaccaaattaattaatatacaccaaatactct 212  Q
    ||||| ||||||||||| |||||| |||||||||    
T  39830771 atcacaaaattaattaacatacacaaaatactct 39830738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 90 - 263
Target Start/End: Complemental strand, 7486949 - 7486774
Alignment:
Q  90 gggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaa-tcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaat 188  Q
    |||| ||||||||| ||||||||| ||||| ||| | |||||||||||| ||| ||||||||||||| ||| ||  ||||  |||||||||| |||||||    
T  7486949 gggtaaggatcaaaagacaccatgatgtcaaaatcactttgacatcaaaatctcatccattcatttcttttgattcaaagacttaaaactatgaccaaat 7486850  T
Q  189 taattaatatacaccaaatactctctatcacctaatt-aagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||||| ||| | |||||||||| |||||||||||| || ||||||||  ||||||||||||||||||| |||||    
T  7486849 taattaacatatatcaaatactctttatcacctaattaaaaaaacatattaatcatcattaatttataattaaaca 7486774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 269 - 375
Target Start/End: Original strand, 34452460 - 34452565
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       || |||| |||||| ||||||||||    
T  34452460 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaac-ttttttatgaaatgaatggttgaactcatat 34452558  T
Q  369 acctatg 375  Q
    |||||||    
T  34452559 acctatg 34452565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 269 - 375
Target Start/End: Original strand, 36150546 - 36150651
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||||||    
T  36150546 tttttacttccccaaatttataaattttcccatatttctataatcatactcaaacttcttttctaaac-ttttttataaaatgaatggtagaactcatat 36150644  T
Q  369 acctatg 375  Q
    |||||||    
T  36150645 acctatg 36150651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 269 - 375
Target Start/End: Original strand, 37875601 - 37875706
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||       ||||||| |||||| ||||||||||    
T  37875601 tttttatttccccaaatttataaattttttcagatttctataatcatactcaaacttcttttctaaac-ttttttataaaatgaatggttgaactcatat 37875699  T
Q  369 acctatg 375  Q
    |||||||    
T  37875700 acctatg 37875706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 27006228 - 27006161
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaac 336  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27006228 tttttatttccccaaatttataaattttcccagatttttataatcatactcaaacttcttttctaaac 27006161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 79 - 181
Target Start/End: Complemental strand, 24433434 - 24433332
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||| ||||||| ||||||||||  ||||||||| ||| ||||||||||    
T  24433434 atatatatatagggataggatcaaatgacaccatgatgtcaaaattagtttgacaccaaatctcatccattcatcacatttaatccaaaagtttaaaact 24433335  T
Q  179 atc 181  Q
    |||    
T  24433334 atc 24433332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 19911193 - 19911108
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgaca-tcaaatcttatccattcatttcatttaatc 163  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||  ||||| |||||||||||||||||||||||    
T  19911193 atatatatatagggttaggatcaaatgacaccatggtgtcaaaattagtttgacacccaaattttatccattcatttcatttaatc 19911108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 269 - 375
Target Start/End: Original strand, 8043252 - 8043357
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||       ||||||| |||| | ||||||||||    
T  8043252 tttttatttccccaaatttataaattttcccatatttctataatcatactcaaactttttttctaaac-ttttttataaaatgaatgattgaactcatat 8043350  T
Q  369 acctatg 375  Q
    |||||||    
T  8043351 acctatg 8043357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 38985979 - 38986075
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaa 175  Q
    |||||||||| ||| |||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||  ||| |||| |||||||||||    
T  38985979 atatatatatagggataggatcaaatgacactatggtgtcaaaattagtttgacaccaaatcttatccattcattatattcaatccaaaggtttaaa 38986075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 98 - 194
Target Start/End: Complemental strand, 38986898 - 38986802
Alignment:
Q  98 atcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatta 194  Q
    ||||||||||| |||||| ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||  |||| ||||||    
T  38986898 atcaaatgacatcatggtatcaaaattagtttgacaccaaatctcatccattcatttcatttaatccaaaggtttaaaactatccacaaaataatta 38986802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 269 - 335
Target Start/End: Original strand, 863416 - 863482
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaa 335  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  863416 tttttatttccccaaatttataaattttctcatatttctataatcatactcaaacttcttttctaaa 863482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 79 - 181
Target Start/End: Original strand, 27059166 - 27059267
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||| ||| ||||||| ||||||||||  ||||||||| |||||||||||| |    
T  27059166 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttcacaccaaatctcatccattcatcacatttaatccaaaggtttaaaatt 27059264  T
Q  179 atc 181  Q
    |||    
T  27059265 atc 27059267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 79 - 181
Target Start/End: Complemental strand, 27060079 - 27059977
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||| ||| ||||||||||||| ||||| |||||| ||||||||||||| ||||||| |||||||||||  |||||||| ||||||||||| ||    
T  27060079 atatatatatagggataggatcaaatgataccatagtgtcaaaattagtttgacaccaaatctcatccattcattatatttaatccaaaggtttaaagct 27059980  T
Q  179 atc 181  Q
    |||    
T  27059979 atc 27059977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 24429608 - 24429703
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaa 175  Q
    ||||||||||||| | |||||||||||||||||| |||||| ||||||||||||| ||||||| |||||||||||  |||||||| |||||||||||    
T  24429608 atatatatatgggat-aggatcaaatgacaccatcgtgtcaaaattagtttgacaccaaatctcatccattcattatatttaatccaaaggtttaaa 24429703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 2868721 - 2868668
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgaca 133  Q
    ||||||||||||| | ||||||||||||||||||||||||| |||||||||||||    
T  2868721 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgaca 2868668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 8911903 - 8911833
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 149  Q
    |||||||||| ||| |||||||||||||||||||||||||| | | | ||||||| |||||| || |||||    
T  8911903 atatatatatagggataggatcaaatgacaccatggtgtcaaattaaatttgacaccaaatcataaccatt 8911833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 325
Target Start/End: Complemental strand, 2054921 - 2054888
Alignment:
Q  292 attttcccagatttctataatcatactcaaactt 325  Q
    ||||||||||||||||||||||||||||||||||    
T  2054921 attttcccagatttctataatcatactcaaactt 2054888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 42849565 - 42849495
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 149  Q
    |||||||||| ||| |||||||||||||||||| ||||||| | | | ||||||| |||||| || |||||    
T  42849565 atatatatatagggataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcctagccatt 42849495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 20203367 - 20203327
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtca 119  Q
    |||||||||  ||| ||||||||||||||||||||||||||    
T  20203367 atatatataatgggataggatcaaatgacaccatggtgtca 20203327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 172; Significance: 2e-92; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 94 - 289
Target Start/End: Complemental strand, 24307158 - 24306963
Alignment:
Q  94 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 193  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24307158 taggatcaaatgacaccatgatgtcaaaattagtttgacatcaaatctcatccattcatttcatttaatccaaaggtttaaaactatcaccaaattaatt 24307059  T
Q  194 aatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttccccaaatttat 289  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24307058 aatatacatcaaatactctctatcacctaattaagaaacatatctatcattattaatttataatcaaacattccatttttatttccccaaatttat 24306963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 79 - 289
Target Start/End: Complemental strand, 42490038 - 42489828
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||| | ||| |||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| |    
T  42490038 atatatatctagggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcatttcatttaatccaaaggtttaaaatt 42489939  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttc 278  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  42489938 atcaccaaattaattaatatacaccaaatactctctatcaccaaattaagaaacatatctatcattattaatttataatcaaacattccatttttatttc 42489839  T
Q  279 cccaaatttat 289  Q
    |||||||||||    
T  42489838 cccaaatttat 42489828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 79 - 289
Target Start/End: Complemental strand, 30002624 - 30002414
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||   |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| ||||| ||||||||    
T  30002624 atatatatatatagttaggatcaaatgacaccatggtgtcaaaattagtttgacatcaaatctcatccattcattttatttaatccaaaggcttaaaact 30002525  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttc 278  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  30002524 atcaccaaattaattaatatacaccaaatactctcaatcgcctaattaaaaaaaatatctatcatcattaatttataatcaaacatttcatttttatttc 30002425  T
Q  279 cccaaatttat 289  Q
    |||||||||||    
T  30002424 cccaaatttat 30002414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 79 - 289
Target Start/End: Original strand, 36783749 - 36783958
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| ||||| | |||| ||||||| |||||||| ||||| ||||||||    
T  36783749 atatatatatggg-ttaggatcaaatgataccatggtgtcaaaattagtttgacaccaaatttcatcctttcattttatttaatccaaaggcttaaaact 36783847  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttc 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  36783848 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaaaatatctatcatcattaatttataatcaaacattccatttttatttc 36783947  T
Q  279 cccaaatttat 289  Q
     ||||||||||    
T  36783948 tccaaatttat 36783958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 79 - 289
Target Start/End: Complemental strand, 37706387 - 37706178
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||| ||||||| |||||||||||| |||||||| ||||| ||||||||    
T  37706387 atatatatatggg-ttaggatcaaatgacactatggtgtcaaaattagtttgacaccaaatctcatccattcatttaatttaatccaaaggcttaaaact 37706289  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttc 278  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||    
T  37706288 atcaccaaattaattaatataaaccaaatactctctatcacctaattaagaaaaataactatcattattaatttataatcaaacattccatttttatttc 37706189  T
Q  279 cccaaatttat 289  Q
    |||||||||||    
T  37706188 cccaaatttat 37706178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 79 - 263
Target Start/End: Complemental strand, 30469503 - 30469320
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||    
T  30469503 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacatcaaatcttatccattcatttcatttaatccaaaggcttagaact 30469405  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  30469404 atcaccaaattaattaacatacatcaaatactctctatcacctaattaagaaacatatctatcatcattaattcataatcaaaca 30469320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 79 - 263
Target Start/End: Complemental strand, 32022728 - 32022544
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||| ||| || ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  32022728 atatatatatagggatatgatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaact 32022629  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  32022628 atcaccaaattaattaatatacatcaaataatctctatcacctaattaagaaacatatctatcatcattgattcataatcaaaca 32022544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 92 - 289
Target Start/End: Original strand, 30468695 - 30468889
Alignment:
Q  92 gttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaa 191  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||  ||||||| |||||||| ||||| |||||||||||||||||||||    
T  30468695 gttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatcatttcattttatttaatccaaaggcttaaaactatcaccaaattaa 30468794  T
Q  192 ttaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttccccaaatttat 289  Q
    ||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  30468795 ttaatatacaccaaatattttctatcacctaattaagaaaaatatctatcatcattaattt---atcaaacattccatttttatttccccaaatttat 30468889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 79 - 263
Target Start/End: Original strand, 32021212 - 32021395
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||||    
T  32021212 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttacccattcatttcatttaatccaaaggcttaaaact 32021310  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  32021311 atcaccaaattaattaacatacatcaaatactctctatcatctaatcaagaaacatatctatcatcattaatttataatcaaaca 32021395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 79 - 263
Target Start/End: Complemental strand, 36784580 - 36784396
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||| ||| ||||||||||||| |||||||||||| ||||||||||||| |||||||||||||| |||||||||||||| ||||| ||| ||||    
T  36784580 atatatatatagggataggatcaaatgataccatggtgtcaaaattagtttgacaccaaatcttatccatccatttcatttaatccaaaggcttagaact 36784481  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  36784480 atcaccaaattaattaacatacatcaaatactctctatcacctaattaagaaacatatctatcatcattaattcataatcaaaca 36784396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 94 - 263
Target Start/End: Original strand, 24306353 - 24306522
Alignment:
Q  94 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 193  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||    
T  24306353 taggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaagcttaaaactatcaccaaattaatt 24306452  T
Q  194 aatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  24306453 aacatacatcaaatactctctatcacctaattaagaaacatatctatcatcattaattcataattaaaca 24306522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 79 - 263
Target Start/End: Original strand, 30001793 - 30001976
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| | ||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||| ||| ||||| ||||||||    
T  30001793 atatatatatgggat-aggatcaaatgacactatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttcatccaaaggcttaaaact 30001891  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||    
T  30001892 atcaccaaattaattaacatacatcaaatactctctatcacctaattaagaaacatatttatcatcattaattcataattaaaca 30001976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 98 - 263
Target Start/End: Original strand, 42489222 - 42489387
Alignment:
Q  98 atcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaattaata 197  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||| |    
T  42489222 atcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttattcattcatttcatttaatccaaaggcttaaaactatcaccaaattaattaaca 42489321  T
Q  198 tacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    |||| ||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||    
T  42489322 tacatcaaatactctctatcacctgattaagaaacatatatatcatcattaattcataatcaaaca 42489387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 269 - 375
Target Start/End: Original strand, 30468900 - 30469005
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| |||||| ||||||||||    
T  30468900 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaac-ttttttataaaatgaatggttgaactcatat 30468998  T
Q  369 acctatg 375  Q
    | |||||    
T  30468999 agctatg 30469005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 24306952 - 24306847
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       ||||||| |||||| ||||||||||    
T  24306952 tttttatttctccaaatttataaattttcccagatttctataatcatactcaaactttttttctaaac-ttttttataaaatgaatggttgaactcatat 24306854  T
Q  369 acctatg 375  Q
    |||||||    
T  24306853 acctatg 24306847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 30002403 - 30002298
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||||| ||||||  |||||||||    
T  30002403 tttttatttccccaaatttataaattttctcagatttctataatcatactcaaacttcttttctaaac-ttttttataaaatgaatggtttaactcatat 30002305  T
Q  369 acctatg 375  Q
    |||||||    
T  30002304 acctatg 30002298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 42489817 - 42489712
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||       ||||||| |||||| ||||||||||    
T  42489817 tttttatttccccaaatttataaattttcctagatttctataatcatactcaaactttttttctaaac-ttttttataaaatgaatggttgaactcatat 42489719  T
Q  369 acctatg 375  Q
    |||||||    
T  42489718 acctatg 42489712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 79 - 181
Target Start/End: Complemental strand, 30471071 - 30470970
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||  ||||||||  ||||||||||||||    
T  30471071 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcatcacatttaattcaaaggtttaaaact 30470973  T
Q  179 atc 181  Q
    |||    
T  30470972 atc 30470970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 269 - 331
Target Start/End: Complemental strand, 37706167 - 37706105
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttc 331  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37706167 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttc 37706105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 269 - 375
Target Start/End: Original strand, 32022114 - 32022219
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||       ||||||| |||||| |||||||||     
T  32022114 tttttatttcccgaaatttataaattttcccagatttctataatcatactcaaactttttttctaaac-ttttttataaaatgaatggttgaactcatac 32022212  T
Q  369 acctatg 375  Q
    |||||||    
T  32022213 acctatg 32022219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 269 - 375
Target Start/End: Original strand, 36783969 - 36784074
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||       ||||||| |||||| ||||||||||    
T  36783969 tttttattttcccaaatttataaattttcccagatttctataatcattctcaaacttcttttctaaac-ttttttataaaatgaatggttgaactcatat 36784067  T
Q  369 acctatg 375  Q
    || ||||    
T  36784068 acttatg 36784074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 26928582 - 26928656
Alignment:
Q  177 ctatcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatt 251  Q
    ||||||||||||||||||| ||||| ||||||||||||||||| ||||||| |||||||| ||||||||||||||    
T  26928582 ctatcaccaaattaattaacatacatcaaatactctctatcacttaattaaaaaacatatatatcatcattaatt 26928656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 104 - 181
Target Start/End: Original strand, 30470127 - 30470204
Alignment:
Q  104 tgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatc 181  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||||||  |||||||| ||||||||||| |||||    
T  30470127 tgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcattatatttaatccaaaggtttaaagctatc 30470204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 229536 - 229478
Alignment:
Q  18 ttgacactgctcgaaattgaggaagaaacatgatgagcaatatgtctcctatctctgag 76  Q
    |||||| ||||| ||||||||||||||||||||||| ||||||||||||||| ||||||    
T  229536 ttgacattgctccaaattgaggaagaaacatgatgaacaatatgtctcctatatctgag 229478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 21415461 - 21415389
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattca 151  Q
    |||||||||| |||||||||||||||||||||| ||||||| | | | | ||||| ||||||| |||||||||    
T  21415461 atatatatatagggttaggatcaaatgacaccaaggtgtcaaattaaatatgacaccaaatctcatccattca 21415389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 177
Target Start/End: Original strand, 3219294 - 3219391
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaac 177  Q
    ||||||||||||| ||||||||||||||||||| ||||||| | | | | |||||  |||||| ||||||||| ||  ||||||| ||||| |||||||    
T  3219294 atatatatatggg-ttaggatcaaatgacaccaaggtgtcaaattaaatatgacactaaatctcatccattcaatttgtttaatctaaaggcttaaaac 3219391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 149
Target Start/End: Original strand, 30659844 - 30659914
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 149  Q
    |||||||||| ||| |||||||||||||||||||||||||| | | | ||||||| |||||| || |||||    
T  30659844 atatatatatagggataggatcaaatgacaccatggtgtcaaattaaatttgacaccaaatcataaccatt 30659914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 31179985 - 31179915
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 149  Q
    |||||||||| ||| |||||||||||||||||| ||||||| | | | ||||||| ||||||||| |||||    
T  31179985 atatatatatagggataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcttaaccatt 31179915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 149
Target Start/End: Original strand, 43334119 - 43334189
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 149  Q
    ||||||||||  || |||||||||||||||||| ||||||| | | |||||||||||||||| || |||||    
T  43334119 atatatatatatggataggatcaaatgacaccaaggtgtcaaattaagtttgacatcaaatcataaccatt 43334189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 38059835 - 38059906
Alignment:
Q  78 aatatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 149  Q
    ||||||||||| ||| |||||||||||||||||| ||||||| | | | ||||||| |||||| || |||||    
T  38059835 aatatatatatagggataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcctagccatt 38059906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 149
Target Start/End: Original strand, 3162858 - 3162928
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 149  Q
    |||||||||| ||| |||||||||||||||||| ||||||| | | | ||||||| |||||| || |||||    
T  3162858 atatatatatagggataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcctaaccatt 3162928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 3163563 - 3163494
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 149  Q
    ||||||||||||| | ||||||||||||||||||||||||| | | | ||||||| |||||| || |||||    
T  3163563 atatatatatgggat-aggatcaaatgacaccatggtgtcaaattaaatttgacaccaaatcataaccatt 3163494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 289
Target Start/End: Original strand, 32022073 - 32022103
Alignment:
Q  259 aaacattccatttttatttccccaaatttat 289  Q
    |||||||||||||||||||||||||||||||    
T  32022073 aaacattccatttttatttccccaaatttat 32022103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 119
Target Start/End: Complemental strand, 46428183 - 46428145
Alignment:
Q  81 atatatatggggttaggatcaaatgacaccatggtgtca 119  Q
    |||||||| ||| ||||||||||||||||||||||||||    
T  46428183 atatatatagggataggatcaaatgacaccatggtgtca 46428145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 8513530 - 8513469
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatc 140  Q
    |||||||||| ||| |||||||||||||||||| ||||||| | | | ||||||| ||||||    
T  8513530 atatatatatagggataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatc 8513469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 168; Significance: 6e-90; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 94 - 289
Target Start/End: Original strand, 24081458 - 24081653
Alignment:
Q  94 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 193  Q
    |||||||||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24081458 taggatcaaatgacaccatggtgtcaaaattaatttgacaccaaatctcatccattcatttcatttaatccaaaggtttaaaactatcaccaaattaatt 24081557  T
Q  194 aatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttccccaaatttat 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  24081558 aatatacaccaaatactctctatcacctaattaagaaacatatctatcattattaatttataatcacacattccatttttatttccccaaatttat 24081653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 79 - 289
Target Start/End: Complemental strand, 48644897 - 48644687
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||| ||||||| |||||||| ||||  ||||||||    
T  48644897 atatatatatagggttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatcccttcattttatttaatccaaagacttaaaact 48644798  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttc 278  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  48644797 atcaccaaattaattaatatacaccaaatactctctatcacctatttaagaaaaatatctatcatcattaatttataatcaaacattccatttttatttc 48644698  T
Q  279 cccaaatttat 289  Q
    |||||||||||    
T  48644697 cccaaatttat 48644687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 91 - 289
Target Start/End: Complemental strand, 51661411 - 51661213
Alignment:
Q  91 ggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaatta 190  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||| |||||||| ||||| |||||| |||||| ||||||    
T  51661411 ggttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcattttatttaatccaaaggcttaaaaatatcactaaatta 51661312  T
Q  191 attaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttccccaaatttat 289  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  51661311 attaatatacaccaaatactctctatcacctaattaagaaaaatatctatcatcattaatttataatcaaacattccatttttatttccccaagtttat 51661213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 79 - 288
Target Start/End: Original strand, 39870052 - 39870261
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||| |||||||||||||||||| ||||||||||| ||||||||||||| ||||||| |||  ||||||| |||||||| ||||| ||||||||    
T  39870052 atatatatatagggttaggatcaaatgacgccatggtgtcaaaattagtttgacaccaaatctcatcatttcattttatttaatccaaaggcttaaaact 39870151  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttc 278  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  39870152 atcaccaaattaattaatatatactaaatactctctatcacctaattaagaaaaatatctatcatcattaatttataatcaaacattccatttttatttc 39870251  T
Q  279 cccaaattta 288  Q
    ||||||||||    
T  39870252 cccaaattta 39870261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 90 - 289
Target Start/End: Complemental strand, 23174095 - 23173897
Alignment:
Q  90 gggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaatt 189  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||| | ||||| |||||||| ||||| |||||||||||||||||||    
T  23174095 gggttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccct-cattttatttaatccaaaggcttaaaactatcaccaaatt 23173997  T
Q  190 aattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttccccaaatttat 289  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23173996 aattaatatacaccaaatactctctatcacctaattaagaaaaatatctatcatcgttaatttataatcaaacattccatttttatttccccaaatttat 23173897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 94 - 289
Target Start/End: Complemental strand, 31151485 - 31151290
Alignment:
Q  94 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 193  Q
    |||||||||||||||||||||| ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  31151485 taggatcaaatgacaccatggtatcaaaattagtttgacaccaaatctcatccattcatttcatttaatccaaaagtttaaaactatcaccaaattaatt 31151386  T
Q  194 aatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttatttccccaaatttat 289  Q
    |||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31151385 aatatataccaaatactctctatcacctaattaagaaacatctttatcatcattaatttataatcaaacattccatttttattttcccaaatttat 31151290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 93 - 277
Target Start/End: Original strand, 23601739 - 23601923
Alignment:
Q  93 ttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaat 192  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  23601739 ttaggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatcaaaaggcttaaaactatcaccaaattaat 23601838  T
Q  193 taatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccatttttattt 277  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| || ||||||    
T  23601839 taacatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaattcataatcaaacaatcccttcttattt 23601923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 79 - 263
Target Start/End: Original strand, 31150667 - 31150851
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||| ||| |||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||| |||||||| ||||| ||||||||    
T  31150667 atatatatatagggataggatcaaatgacacaatggtgtcaaaattagtttgacaccaaatcttatccattcattttatttaatccaaaggcttaaaact 31150766  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||| ||||| ||||||||||||||||||||||| |||||||||||    
T  31150767 atcaccaaattaattaacatacatcaaatactctcaatcacctgattaaaaaacatatctatcatcattaattcataatcaaaca 31150851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 94 - 263
Target Start/End: Original strand, 23173288 - 23173457
Alignment:
Q  94 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaatt 193  Q
    ||||||||||||||| |||||||||| |||||||||||||  |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  23173288 taggatcaaatgacatcatggtgtcaaaattagtttgacactaaatcttatccattcatttcatttaatccaaaggcttaaaactatcaccaaattaatt 23173387  T
Q  194 aatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    || ||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  23173388 aacatacatcaaatactccctatcacctaattaagaaacatatctatcattattaattcataatcaaaca 23173457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 97 - 263
Target Start/End: Complemental strand, 39870859 - 39870693
Alignment:
Q  97 gatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaattaattaat 196  Q
    ||||||||||||||||||||||| | ||||||||||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||     
T  39870859 gatcaaatgacaccatggtgtcaaatttagtttgacaccaaatcttatcaattcatttcatttaatccaaaggcttaaaactatcaccaaattaattaac 39870760  T
Q  197 atacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||| ||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  39870759 atacatcaaatactcactatcacctaattaagaaacatatatatcatcattaattcataatcaaaca 39870693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 79 - 263
Target Start/End: Complemental strand, 48577621 - 48577438
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||| ||||| ||||||||    
T  48577621 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcattccatttaatccaaaggcttaaaact 48577523  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||||||||||||||| ||||| |||||||||| | ||| || ||||||||||||||||||||| ||||||| |||||||||||    
T  48577522 atcaccaaattaattaacatacatcaaatactctttttcatcttattaagaaacatatctatcattattaattcataatcaaaca 48577438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 79 - 263
Target Start/End: Original strand, 51660592 - 51660774
Alignment:
Q  79 atatatatatggggttaggatcaaatgacac-catggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaac 177  Q
    ||||||||||  || |||||||||||||||| |||||||||| |||||||||| || ||||||||||||||||||||||||||||| ||||| |||||||    
T  51660592 atatatatatatggataggatcaaatgacacacatggtgtcaaaattagtttgtcaccaaatcttatccattcatttcatttaatccaaaggcttaaaac 51660691  T
Q  178 tatcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||   ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  51660692 ta---ccaaattaattaacatacatcaaatactctctatcacctaattaagaaacatatctatcatcattaattcataatcaaaca 51660774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 89 - 246
Target Start/End: Complemental strand, 24082253 - 24082096
Alignment:
Q  89 ggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatcaccaaat 188  Q
    |||| ||||||||||||||| |||||| ||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  24082253 ggggataggatcaaatgacatcatggtatcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaactatcaccaaat 24082154  T
Q  189 taattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcat 246  Q
    ||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  24082153 taattaacatacatcaaatattctctatcacctaattaagaaacatatctatcatcat 24082096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 170 - 289
Target Start/End: Complemental strand, 18249287 - 18249168
Alignment:
Q  170 tttaaaactatcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaacattccat 269  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||    
T  18249287 tttaaaactatcaccaaattaattaatatacatcaaatactctctatcacctaattaagaaacatatctatcattattaatttataatcaaacattctat 18249188  T
Q  270 ttttatttccccaaatttat 289  Q
    ||||||||||||||||||||    
T  18249187 ttttatttccccaaatttat 18249168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 236 - 375
Target Start/End: Complemental strand, 23602371 - 23602233
Alignment:
Q  236 tctatcatcattaatttataatcaaacattccatttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaa 335  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23602371 tctattatcattaatttataatcaaacattccatttttatttccccaaatttataaattttcccatatttctataatcatactcaaacttcttttctaaa 23602272  T
Q  336 cnnnnnnnataaaataaatggtagaactcatatacctatg 375  Q
    |       ||||||| ||||||||||||||||||||||||    
T  23602271 c-ttttttataaaatgaatggtagaactcatatacctatg 23602233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 79 - 216
Target Start/End: Complemental strand, 23602505 - 23602367
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtca---taattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaa 175  Q
    |||||||||| ||||||||||||||||||||||||||||||   |||||  ||||||| ||||||||||||||||||||||||||||  |||||||||||    
T  23602505 atatatatatagggttaggatcaaatgacaccatggtgtcaaactaatt--tttgacaccaaatcttatccattcatttcatttaattcaaaggtttaaa 23602408  T
Q  176 actatcaccaaattaattaatatacaccaaatactctctat 216  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  23602407 actatcaccaaattaattaatatacaccaaatattctctat 23602367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 23173886 - 23173780
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| |||||| ||||||||||    
T  23173886 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaactttttttataaaatgaatggttgaactcatat 23173787  T
Q  369 acctatg 375  Q
    |||||||    
T  23173786 acctatg 23173780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 18249126 - 18249021
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       ||||||| |||||| ||||||||||    
T  18249126 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaactttttttctaaac-ttttttataaaatgaatggttgaactcatat 18249028  T
Q  369 acctatg 375  Q
    |||||||    
T  18249027 acctatg 18249021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 269 - 375
Target Start/End: Original strand, 24081664 - 24081769
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||       ||||||| |||||| ||||||||||    
T  24081664 tttttatttccccaaatttataaattttcccagatttatataatcatactcaaactttttttctaaac-ttttttataaaatgaatggttgaactcatat 24081762  T
Q  369 acctatg 375  Q
    |||||||    
T  24081763 acctatg 24081769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 51661202 - 51661097
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||       ||||||| |||||| ||||||||||    
T  51661202 tttttattttcccaaatttataaattttcccagatttctataatcatactcaaacttcttttttaaac-ttttttataaaatgaatggttgaactcatat 51661104  T
Q  369 acctatg 375  Q
    |||||||    
T  51661103 acctatg 51661097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 39870273 - 39870340
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaac 336  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  39870273 tttttatttccccaaatttataaatttttccagatttctataatcatactcaaacttcttttctaaac 39870340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 79 - 181
Target Start/End: Complemental strand, 4595642 - 4595540
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||  ||| |||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||  |||||||| ||||||||||| ||    
T  4595642 atatatataatgggataggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcattatatttaatccaaaggtttaaagct 4595543  T
Q  179 atc 181  Q
    |||    
T  4595542 atc 4595540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 94 - 181
Target Start/End: Complemental strand, 40959823 - 40959736
Alignment:
Q  94 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatc 181  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||  |||||||| ||||||||||| |||||    
T  40959823 taggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatctcatccattcattatatttaatccaaaggtttaaagctatc 40959736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 31151279 - 31151174
Alignment:
Q  269 tttttatttccccaaatttataaattttcccagatttctataatcatactcaaacttcttttctaaacnnnnnnnataaaataaatggtagaactcatat 368  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||       ||||||| |||||| ||||||||||    
T  31151279 tttttattttcccaaatttataaattttctcagatttctataatcatacttaaactttttttctaaac-ttttttataaaatgaatggttgaactcatat 31151181  T
Q  369 acctatg 375  Q
    |||||||    
T  31151180 acctatg 31151174  T

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Target: chr1; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 94 - 181
Target Start/End: Original strand, 4594710 - 4594797
Alignment:
Q  94 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatc 181  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||| | ||||||||||  ||||||||  |||||||||||||||||    
T  4594710 taggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatttcatccattcatcacatttaattcaaaggtttaaaactatc 4594797  T

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Target: chr1; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 94 - 181
Target Start/End: Original strand, 40958891 - 40958978
Alignment:
Q  94 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatc 181  Q
    ||||||||||||| |||||||||||| ||||||||||||| ||||||  ||||||||||  ||||||||  |||||||||||||||||    
T  40958891 taggatcaaatgataccatggtgtcaaaattagtttgacaccaaatcccatccattcatcacatttaattcaaaggtttaaaactatc 40958978  T

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Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 97 - 177
Target Start/End: Complemental strand, 50505446 - 50505366
Alignment:
Q  97 gatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaac 177  Q
    |||||||| | ||| |||||||| ||||| ||||||||||||||| ||||||| ||||| ||||||| ||||| |||||||    
T  50505446 gatcaaataataccgtggtgtcaaaattattttgacatcaaatctcatccatttatttcctttaatccaaaggcttaaaac 50505366  T

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Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 78 - 149
Target Start/End: Complemental strand, 21791548 - 21791478
Alignment:
Q  78 aatatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 149  Q
    |||||||||||||| | ||||||||||||||||||||||||| | | | ||||||| ||||||||| |||||    
T  21791548 aatatatatatgggat-aggatcaaatgacaccatggtgtcaaattaaatttgacaccaaatcttaaccatt 21791478  T

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Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 149
Target Start/End: Original strand, 5216550 - 5216620
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 149  Q
    |||||||||| ||| |||||||||||||||||||||||||| | | | ||||| | ||||||||| |||||    
T  5216550 atatatatatagggataggatcaaatgacaccatggtgtcaaattaaatttgataccaaatcttaaccatt 5216620  T

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Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 14886141 - 14886181
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtca 119  Q
    |||||||||| ||| ||||||||||||||||||||||||||    
T  14886141 atatatatatagggataggatcaaatgacaccatggtgtca 14886181  T

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Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 183
Target Start/End: Original strand, 16317541 - 16317645
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||| ||| || |||||||||||| |||||||||| | | | | ||| | ||||||||||||||| | ||  ||||||| ||||| |||||||     
T  16317541 atatatatatagggataagatcaaatgacatcatggtgtcaaattaaatgtgagaccaaatcttatccatttaatttgtttaatccaaaggcttaaaaca 16317640  T
Q  179 atcac 183  Q
    |||||    
T  16317641 atcac 16317645  T

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Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 149
Target Start/End: Original strand, 21790739 - 21790809
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 149  Q
    |||||||||| ||| |||||||||||||||||| ||||||| | | | ||||||| |||||| || |||||    
T  21790739 atatatatatagggataggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcataaccatt 21790809  T

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Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 44672184 - 44672106
Alignment:
Q  84 tatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaat 162  Q
    ||||| ||| || |||||||||||| |||||||  | ||||||||||||| ||||| | ||| ||||||| ||||||||    
T  44672184 tatatagggataagatcaaatgacatcatggtggtaaaattagtttgacaccaaatatcatctattcattacatttaat 44672106  T

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Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 5496534 - 5496574
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtca 119  Q
    |||||||||| ||| |||||||||||||||||| |||||||    
T  5496534 atatatatatagggataggatcaaatgacaccaaggtgtca 5496574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 17606252 - 17606292
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtca 119  Q
    |||||||||| ||| |||||||||||||||||| |||||||    
T  17606252 atatatatatagggataggatcaaatgacaccaaggtgtca 17606292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 297
Target Start/End: Complemental strand, 48644676 - 48644648
Alignment:
Q  269 tttttatttccccaaatttataaattttc 297  Q
    |||||||||||||||||||||||||||||    
T  48644676 tttttatttccccaaatttataaattttc 48644648  T

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Target: scaffold0050 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 79 - 263
Target Start/End: Original strand, 8401 - 8584
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  8401 atatatatatgggat-aggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaact 8499  T
Q  179 atcaccaaattaattaatatacaccaaatactctctatcacctaattaagaaacatatctatcatcattaatttataatcaaaca 263  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  8500 atcaccaaattaattaacatacatcaaatactccctatcacctaattaagaaacatatctattatcattaattcataatcaaaca 8584  T

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Target: scaffold1339 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold1339
Description:

Target: scaffold1339; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 79 - 183
Target Start/End: Original strand, 1906 - 2009
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    ||||||||||||| | |||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  1906 atatatatatgggat-aggatcaaataacaccatggtgtcaaaattagtttgacaccaaatcttatccattcatttcatttaatccaaaggcttaaaact 2004  T
Q  179 atcac 183  Q
    |||||    
T  2005 atcac 2009  T

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Target: scaffold0093 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 79 - 181
Target Start/End: Original strand, 21944 - 22046
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaact 178  Q
    |||||||||| ||| ||||||||||||| |||||||||||| ||||||||||||| ||||||| |||||||||||  |||||||| ||||||||||| ||    
T  21944 atatatatatagggataggatcaaatgataccatggtgtcaaaattagtttgacaccaaatctcatccattcattatatttaatccaaaggtttaaagct 22043  T
Q  179 atc 181  Q
    |||    
T  22044 atc 22046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 94 - 181
Target Start/End: Complemental strand, 22819 - 22732
Alignment:
Q  94 taggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccattcatttcatttaatcgaaaggtttaaaactatc 181  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||| | ||||||||||  ||||||||  |||||||||||||||||    
T  22819 taggatcaaatgacaccatggtgtcaaaattagtttgacaccaaatttcatccattcatcacatttaattcaaaggtttaaaactatc 22732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 149
Target Start/End: Original strand, 105500 - 105569
Alignment:
Q  79 atatatatatggggttaggatcaaatgacaccatggtgtcataattagtttgacatcaaatcttatccatt 149  Q
    ||||||||||||| | ||||||||||||||||| ||||||| | | | ||||||| ||||||||| |||||    
T  105500 atatatatatgggat-aggatcaaatgacaccaaggtgtcaaattaaatttgacaccaaatcttaaccatt 105569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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