View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15217_low_36 (Length: 310)
Name: NF15217_low_36
Description: NF15217
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15217_low_36 |
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Alignment Details
Target: chr6 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 8 - 291
Target Start/End: Original strand, 33512638 - 33512921
Alignment:
| Q |
8 |
agagaagaagataataatcaacatggttcatcaaggtttagtattggaagcagctttaggaaaattggaaaagctactactatatttaaggaagaagaaa |
107 |
Q |
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| T |
33512638 |
agagaagaagataataatcaacatggttcatcaaggtttagtattggaagcagctttaggaaaattggaaaagctactactatatttaaggaagaagaaa |
33512737 |
T |
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| Q |
108 |
aaggtattatttcaaaggaagaagaattgcttatagaaaaaagtgattctaacaataaagcttatcataagcataatcacaagattactatatctgatgt |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33512738 |
aaggtattatttcaaaggaagaagaattgcttatagaaaaaagtgattctaacaataaagcttatcataagcataatcacaagattactatatctgatgt |
33512837 |
T |
|
| Q |
208 |
tgtgtttaagcatagatggagcaatgttagttcttctgatcttatgtttttgaattcagaaatgattaatgcttcatcaagtaa |
291 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33512838 |
tgtgtttaagcatagatggagcaatgttagttcttctgatcttatgtttttgaattcagaaatgattaatgcttcatcaagtaa |
33512921 |
T |
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