View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15219_low_3 (Length: 301)
Name: NF15219_low_3
Description: NF15219
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15219_low_3 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 33 - 301
Target Start/End: Complemental strand, 37442775 - 37442507
Alignment:
| Q |
33 |
acattttataaagaactactaatatattcgtatcatcacataattaagacagcaaacactattagattatattcaagatcatcacataattcatatcttc |
132 |
Q |
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| T |
37442775 |
acattttataaagaactactaatatattcatatcatcacataattaagacagcaaacactattagaatatattcaagatcatcacataattcatatcttc |
37442676 |
T |
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| Q |
133 |
tataatctcttgaattaacctttgtgagatatagaaaacatgactctgtctatgagaatctcttggaagaaaccaaaagctcagaagacaaatgaagcat |
232 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37442675 |
tataatctcttgaattaacctttgtgagatatagaaaacatgactctgtctatgagaatctcttggaagaaaccaaaagctcagaagacaaatgaagcat |
37442576 |
T |
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| Q |
233 |
gctaacaaacacatccattacctaaacaaaaagctgaccaatatattcaagatcgaagattcattcact |
301 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37442575 |
gctaacaaacacatccattacctaaacaaaaagctgaccaatatattcaagatcgaagattcattcact |
37442507 |
T |
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