View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1521_high_2 (Length: 327)
Name: NF1521_high_2
Description: NF1521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1521_high_2 |
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Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 20 - 232
Target Start/End: Complemental strand, 6390788 - 6390576
Alignment:
| Q |
20 |
cacagaactaaaccacactcgagagttccacacagtaatccttaaccacacaatgttatcaagattttatattattccttgctaatcaaacaaccttgaa |
119 |
Q |
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| T |
6390788 |
cacagaactaaaccacactcgagagttccacacagtaatccttaaccacacaatgttatcaagattttatattattccttgctaatcaaacaaccttgaa |
6390689 |
T |
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| Q |
120 |
aatcactcctttgattagttagtccatgtgaacttagacattgttgtacctttaattgtataccttcataacatgcttcccacgaggtggggcttcaatg |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6390688 |
aatcactcctttgattagttagtccatgtgaacttagacattgttgtacctttaattgtataccttcataacatgcttcccacgaggtggggcttcaatg |
6390589 |
T |
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| Q |
220 |
catgatattggtg |
232 |
Q |
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||||||||||||| |
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| T |
6390588 |
catgatattggtg |
6390576 |
T |
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