View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1521_low_7 (Length: 295)
Name: NF1521_low_7
Description: NF1521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1521_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 96 - 213
Target Start/End: Complemental strand, 43032101 - 43031984
Alignment:
| Q |
96 |
aattcaaaccagtagtaaaagcttcatgggacacacaacaaagactcccttataaccgcaacgctcctagaaaactcaccactcaaccaccaaaaccaca |
195 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43032101 |
aattcaaaccagtagtaaaagcttcatgggacacacaacaaagactcccttataaccgcaacgctcctagaaaactcaccactcaaccaccaaaaccaca |
43032002 |
T |
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| Q |
196 |
atctccttctcccacttc |
213 |
Q |
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|||||||||||||||||| |
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| T |
43032001 |
atctccttctcccacttc |
43031984 |
T |
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