View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15221_high_2 (Length: 201)
Name: NF15221_high_2
Description: NF15221
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15221_high_2 |
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Alignment Details
Target: chr1 (Bit Score: 161; Significance: 4e-86; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 161; E-Value: 4e-86
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 2131047 - 2131219
Alignment:
| Q |
18 |
aagaggaactccaatgttctttcagtgtacacatcacagactatactcgcatgcaaggtgtgcgcatcttaggcctccttcacttgacatgttcactttt |
117 |
Q |
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|||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2131047 |
aagaggaactcctatgttctttcagtgtacaaatcacagactatactcgcatgcaaggtgtgcgcatcttaggcctccttcacttgacatgttcactttt |
2131146 |
T |
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| Q |
118 |
gacttgcaattgggacttgagacaagattctcctaaattttatggacttcatatctttgttgtgatattcttc |
190 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
2131147 |
gacttgcaattgggacttgagacaagattctcctaaattttatggacttcatatctttgttgtgattttcttc |
2131219 |
T |
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