View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15228_high_35 (Length: 215)
Name: NF15228_high_35
Description: NF15228
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15228_high_35 |
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Alignment Details
Target: chr3 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 25 - 197
Target Start/End: Original strand, 20768159 - 20768331
Alignment:
| Q |
25 |
gtttcatggccactactcttgtttgtacgtgacaagttgtcaacaaaaacaagacgtgttttgattgttgtcacacagacagtttctgcaaatctttgac |
124 |
Q |
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| T |
20768159 |
gtttcatggccactactcttgtttgtacgtgacaagttgtcaacaaaaacaagacgtgttttgattgttgtcacacagacagtttctgcaaatctttgac |
20768258 |
T |
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| Q |
125 |
ctatacaaatattttaatattttcctatgttacttgtttcccactagtacataataaaatgtgtgtgtctgtg |
197 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20768259 |
ctatacaaatattttaatattttcctatgttacttgtttcccactagtacataataaaatgtgtgtgtctgtg |
20768331 |
T |
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