View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15228_low_22 (Length: 286)
Name: NF15228_low_22
Description: NF15228
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15228_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 46 - 270
Target Start/End: Original strand, 46228702 - 46228926
Alignment:
| Q |
46 |
agcaaaatgacacactagacccactatataaggggtgccacttgcttctttgagttgctctcctttccagaagtggtatcctataataacctttctttta |
145 |
Q |
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| T |
46228702 |
agcaaaatgacacactagacccactatataaggggtgccacttgcttctttgagttgctctcctttccagaagtggtatcctataataacctttctttta |
46228801 |
T |
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| Q |
146 |
tatattcatggccaccatcataacagtaaagtactaaatgataaactcatcaaatttctaaagctttagtgttttggctcacaaagttaatgtggacata |
245 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46228802 |
tatattcatggccaccatcataacagtaaagtactaaatgataaactcctcaaatttctaaagctttagtgttttggctcacaaagttaatgtggacata |
46228901 |
T |
|
| Q |
246 |
actaagagcttggtgcataaccaac |
270 |
Q |
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||||||||||||||||||||||||| |
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| T |
46228902 |
actaagagcttggtgcataaccaac |
46228926 |
T |
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