View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15228_low_37 (Length: 231)
Name: NF15228_low_37
Description: NF15228
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15228_low_37 |
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Alignment Details
Target: chr7 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 3790141 - 3790360
Alignment:
| Q |
1 |
tctaaagttgaagggagcttcgcaatgccatgctagatgatcaccttcctcgcccttcccctcgtatgtgtctatgagtagtcatactcaacaaattaat |
100 |
Q |
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| T |
3790141 |
tctaaagttgaagggagcttcgcaatgccatgctagatgatcaccttcctcttccttcccctcttatgtgtctatgagtagtcatactcaacaaattaat |
3790240 |
T |
|
| Q |
101 |
tgaaaacaaattagaataatcataagcgagataagttttaattgagatgatgagtttannnnnnnncttgttgagaaatatgactatttgctcctattcc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
3790241 |
tgaaaacaaattagaataatcataagcgagataagttctaattgagatgatgagttta-ttttttccttgttgagaaatatgactatttgctcctattcc |
3790339 |
T |
|
| Q |
201 |
tacaattctattgagatgatg |
221 |
Q |
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||||||||||||||||||||| |
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| T |
3790340 |
tacaattctattgagatgatg |
3790360 |
T |
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