View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15228_low_39 (Length: 219)

Name: NF15228_low_39
Description: NF15228
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15228_low_39
NF15228_low_39
[»] chr2 (28 HSPs)
chr2 (43-219)||(11938813-11938989)
chr2 (135-219)||(18868916-18869001)
chr2 (140-218)||(23869560-23869638)
chr2 (137-217)||(36450947-36451027)
chr2 (141-219)||(7898689-7898768)
chr2 (141-219)||(36449776-36449855)
chr2 (138-219)||(16446149-16446231)
chr2 (146-219)||(22848194-22848268)
chr2 (36-130)||(27206367-27206461)
chr2 (141-218)||(38840518-38840596)
chr2 (138-218)||(18906012-18906093)
chr2 (146-217)||(1033214-1033284)
chr2 (137-219)||(18299367-18299450)
chr2 (142-219)||(13567971-13568049)
chr2 (138-218)||(7899907-7899988)
chr2 (140-219)||(18904364-18904444)
chr2 (146-219)||(13570581-13570655)
chr2 (44-142)||(20374110-20374208)
chr2 (138-219)||(38839237-38839319)
chr2 (146-219)||(802615-802688)
chr2 (165-218)||(11258836-11258889)
chr2 (146-219)||(18300748-18300820)
chr2 (58-130)||(3914252-3914324)
chr2 (146-218)||(13030295-13030365)
chr2 (141-189)||(18797244-18797294)
chr2 (146-199)||(21837299-21837351)
chr2 (135-219)||(22587978-22588062)
chr2 (163-219)||(32739644-32739700)
[»] chr1 (34 HSPs)
chr1 (36-142)||(33064805-33064911)
chr1 (133-219)||(45149995-45150081)
chr1 (140-219)||(23980490-23980570)
chr1 (141-219)||(14999283-14999361)
chr1 (36-137)||(41917070-41917172)
chr1 (142-218)||(24426100-24426177)
chr1 (141-218)||(43058784-43058861)
chr1 (141-218)||(50680330-50680407)
chr1 (137-209)||(41364823-41364895)
chr1 (141-219)||(7674526-7674603)
chr1 (138-219)||(24422795-24422877)
chr1 (146-219)||(52274971-52275045)
chr1 (37-142)||(21487822-21487927)
chr1 (146-219)||(39699791-39699864)
chr1 (146-219)||(45157233-45157306)
chr1 (36-107)||(19274265-19274336)
chr1 (138-219)||(11437223-11437305)
chr1 (146-219)||(36613928-36614002)
chr1 (146-219)||(39698566-39698640)
chr1 (166-219)||(44404466-44404519)
chr1 (58-142)||(17122816-17122900)
chr1 (146-189)||(35594220-35594264)
chr1 (138-189)||(52828124-52828176)
chr1 (137-219)||(51685789-51685872)
chr1 (146-219)||(11436045-11436119)
chr1 (142-219)||(37526901-37526979)
chr1 (142-219)||(39153140-39153218)
chr1 (146-219)||(51684369-51684443)
chr1 (141-214)||(52276192-52276266)
chr1 (166-219)||(7675483-7675536)
chr1 (141-198)||(7983048-7983105)
chr1 (139-219)||(39151927-39152008)
chr1 (146-211)||(39222505-39222572)
chr1 (146-189)||(52827350-52827394)
[»] chr3 (35 HSPs)
chr3 (136-219)||(29931219-29931303)
chr3 (136-219)||(29980373-29980457)
chr3 (141-219)||(7268851-7268929)
chr3 (138-219)||(7267639-7267720)
chr3 (137-219)||(12700169-12700250)
chr3 (146-219)||(54539758-54539832)
chr3 (146-219)||(8456481-8456554)
chr3 (138-218)||(5029708-5029788)
chr3 (43-142)||(7164995-7165094)
chr3 (140-211)||(11671373-11671444)
chr3 (55-130)||(19185075-19185150)
chr3 (146-219)||(29932723-29932796)
chr3 (146-219)||(29981877-29981950)
chr3 (147-219)||(24516464-24516537)
chr3 (141-209)||(47610614-47610683)
chr3 (139-218)||(7758398-7758478)
chr3 (141-219)||(19984847-19984926)
chr3 (141-219)||(22776836-22776915)
chr3 (146-219)||(54540814-54540888)
chr3 (57-142)||(10287681-10287766)
chr3 (146-219)||(12703524-12703597)
chr3 (36-137)||(20952380-20952481)
chr3 (139-199)||(47615592-47615653)
chr3 (140-219)||(534496-534576)
chr3 (132-219)||(51038814-51038902)
chr3 (140-188)||(51470510-51470558)
chr3 (135-219)||(54987031-54987114)
chr3 (142-219)||(52104480-52104554)
chr3 (146-218)||(535807-535880)
chr3 (137-189)||(47609691-47609744)
chr3 (166-219)||(55192019-55192072)
chr3 (56-92)||(27636905-27636941)
chr3 (56-92)||(27639974-27640010)
chr3 (133-216)||(49216237-49216321)
chr3 (146-209)||(51469975-51470039)
[»] chr8 (33 HSPs)
chr8 (135-218)||(24122875-24122958)
chr8 (140-219)||(5514294-5514373)
chr8 (36-141)||(17275573-17275677)
chr8 (144-216)||(29968364-29968436)
chr8 (141-219)||(5513980-5514058)
chr8 (146-219)||(12353385-12353457)
chr8 (36-137)||(43848087-43848188)
chr8 (146-219)||(11287779-11287853)
chr8 (146-219)||(18979144-18979218)
chr8 (146-219)||(8388467-8388539)
chr8 (138-219)||(18970906-18970987)
chr8 (138-219)||(18978015-18978096)
chr8 (146-218)||(30336526-30336599)
chr8 (43-142)||(17279122-17279220)
chr8 (146-219)||(22221388-22221462)
chr8 (146-219)||(22227730-22227804)
chr8 (42-95)||(13329515-13329568)
chr8 (55-96)||(28975015-28975056)
chr8 (44-137)||(29043163-29043256)
chr8 (142-218)||(40471172-40471248)
chr8 (148-219)||(1824102-1824174)
chr8 (148-219)||(1858547-1858619)
chr8 (141-208)||(11282006-11282074)
chr8 (141-199)||(10007807-10007866)
chr8 (141-191)||(11288912-11288963)
chr8 (146-199)||(10006347-10006401)
chr8 (146-219)||(22220391-22220465)
chr8 (146-219)||(24359812-24359884)
chr8 (146-218)||(30335642-30335715)
chr8 (146-219)||(32207349-32207421)
chr8 (55-96)||(43856151-43856192)
chr8 (163-219)||(24488703-24488759)
chr8 (37-117)||(40263642-40263722)
[»] chr4 (37 HSPs)
chr4 (141-219)||(49308051-49308129)
chr4 (137-218)||(19750600-19750681)
chr4 (137-218)||(19789125-19789206)
chr4 (140-219)||(26421646-26421725)
chr4 (136-219)||(37728589-37728672)
chr4 (134-218)||(1963187-1963272)
chr4 (43-142)||(13242175-13242274)
chr4 (138-219)||(8155733-8155814)
chr4 (142-219)||(8758861-8758939)
chr4 (141-219)||(17382991-17383069)
chr4 (141-219)||(17388235-17388313)
chr4 (148-219)||(31599794-31599866)
chr4 (140-218)||(1290223-1290302)
chr4 (141-219)||(1835126-1835205)
chr4 (140-219)||(8757672-8757751)
chr4 (145-219)||(12129625-12129700)
chr4 (164-219)||(33310113-33310168)
chr4 (141-219)||(52491631-52491710)
chr4 (138-189)||(55603585-55603636)
chr4 (141-199)||(5526170-5526228)
chr4 (142-219)||(21539095-21539173)
chr4 (140-209)||(25685856-25685926)
chr4 (146-219)||(31601009-31601083)
chr4 (36-137)||(38499835-38499936)
chr4 (138-219)||(49306770-49306851)
chr4 (146-209)||(10471422-10471486)
chr4 (58-117)||(20383961-20384020)
chr4 (140-219)||(33296221-33296300)
chr4 (146-219)||(1834122-1834196)
chr4 (146-219)||(1964465-1964539)
chr4 (141-209)||(13386012-13386082)
chr4 (140-189)||(48780245-48780295)
chr4 (58-91)||(12714267-12714300)
chr4 (146-219)||(35934347-35934419)
chr4 (142-218)||(54110653-54110727)
chr4 (146-189)||(10470549-10470593)
chr4 (146-189)||(25684937-25684981)
[»] chr5 (28 HSPs)
chr5 (146-219)||(19752915-19752988)
chr5 (139-219)||(25523065-25523146)
chr5 (156-219)||(19754154-19754217)
chr5 (146-219)||(36485303-36485377)
chr5 (139-219)||(20216787-20216868)
chr5 (138-218)||(28538671-28538752)
chr5 (142-219)||(28539844-28539921)
chr5 (135-209)||(5778870-5778945)
chr5 (146-219)||(1796057-1796131)
chr5 (141-218)||(16650880-16650958)
chr5 (146-219)||(22940646-22940720)
chr5 (134-219)||(36486512-36486598)
chr5 (36-130)||(22602016-22602110)
chr5 (146-219)||(25056405-25056479)
chr5 (146-219)||(20214199-20214272)
chr5 (57-117)||(28637630-28637690)
chr5 (141-209)||(5730439-5730509)
chr5 (163-218)||(7311611-7311666)
chr5 (141-219)||(33160310-33160389)
chr5 (141-219)||(40255696-40255775)
chr5 (165-219)||(2686425-2686479)
chr5 (139-189)||(5777897-5777946)
chr5 (146-199)||(18485141-18485195)
chr5 (142-219)||(24332912-24332990)
chr5 (141-219)||(25524151-25524231)
chr5 (36-101)||(31792589-31792653)
chr5 (183-219)||(25524122-25524158)
chr5 (163-219)||(33158119-33158175)
[»] scaffold0019 (2 HSPs)
scaffold0019 (146-219)||(61483-61557)
scaffold0019 (146-219)||(60093-60167)
[»] scaffold0059 (1 HSPs)
scaffold0059 (146-219)||(4754-4827)
[»] chr6 (21 HSPs)
chr6 (139-219)||(16704521-16704602)
chr6 (139-209)||(8821869-8821940)
chr6 (138-219)||(1829627-1829709)
chr6 (141-202)||(7316335-7316397)
chr6 (140-209)||(8659262-8659332)
chr6 (36-117)||(13580141-13580222)
chr6 (141-218)||(27322093-27322170)
chr6 (141-189)||(34834633-34834682)
chr6 (146-217)||(3721615-3721687)
chr6 (138-189)||(3722561-3722613)
chr6 (58-142)||(34673082-34673166)
chr6 (141-219)||(27437826-27437905)
chr6 (156-218)||(10785938-10786000)
chr6 (145-219)||(26575078-26575151)
chr6 (138-218)||(6842308-6842389)
chr6 (141-219)||(10784590-10784670)
chr6 (141-219)||(14823599-14823679)
chr6 (137-189)||(26574613-26574666)
chr6 (146-189)||(7314883-7314927)
chr6 (146-189)||(8660257-8660301)
chr6 (146-218)||(16703573-16703643)
[»] scaffold0302 (2 HSPs)
scaffold0302 (140-219)||(17467-17547)
scaffold0302 (146-219)||(18800-18874)
[»] chr7 (31 HSPs)
chr7 (45-137)||(38993091-38993183)
chr7 (163-219)||(47369802-47369858)
chr7 (140-218)||(22630477-22630556)
chr7 (135-189)||(127329-127383)
chr7 (146-219)||(18371427-18371501)
chr7 (141-218)||(42886311-42886389)
chr7 (134-209)||(17782587-17782663)
chr7 (137-219)||(11662575-11662658)
chr7 (148-219)||(14999179-14999249)
chr7 (156-219)||(18372481-18372544)
chr7 (140-209)||(3227628-3227698)
chr7 (36-130)||(20382332-20382426)
chr7 (141-219)||(21505414-21505491)
chr7 (141-209)||(31949836-31949905)
chr7 (140-209)||(34174017-34174086)
chr7 (140-199)||(7501896-7501956)
chr7 (146-219)||(31659625-31659700)
chr7 (57-117)||(37375021-37375081)
chr7 (146-209)||(3227111-3227174)
chr7 (146-189)||(7500458-7500501)
chr7 (141-219)||(11658377-11658456)
chr7 (139-209)||(31949318-31949389)
chr7 (146-219)||(769416-769490)
chr7 (146-211)||(20163588-20163654)
chr7 (146-199)||(47525411-47525465)
chr7 (146-219)||(48934927-48935001)
chr7 (174-219)||(22629518-22629563)
chr7 (140-189)||(46483562-46483611)
chr7 (142-189)||(128655-128703)
chr7 (146-189)||(17781664-17781708)
chr7 (150-209)||(47524532-47524592)
[»] scaffold0632 (1 HSPs)
scaffold0632 (137-219)||(3332-3414)
[»] scaffold0111 (1 HSPs)
scaffold0111 (44-142)||(41228-41326)
[»] scaffold0045 (1 HSPs)
scaffold0045 (146-218)||(49109-49182)
[»] scaffold0041 (1 HSPs)
scaffold0041 (36-137)||(3377-3478)
[»] scaffold1303 (1 HSPs)
scaffold1303 (141-219)||(1437-1516)
[»] scaffold0186 (2 HSPs)
scaffold0186 (135-189)||(23073-23126)
scaffold0186 (134-202)||(23931-24000)
[»] scaffold0294 (1 HSPs)
scaffold0294 (140-219)||(5462-5542)
[»] scaffold0093 (2 HSPs)
scaffold0093 (146-209)||(2499-2562)
scaffold0093 (146-209)||(7122-7185)
[»] scaffold0003 (1 HSPs)
scaffold0003 (141-219)||(49457-49536)
[»] scaffold2034 (1 HSPs)
scaffold2034 (146-219)||(236-310)
[»] scaffold0586 (1 HSPs)
scaffold0586 (139-219)||(6339-6420)
[»] scaffold0320 (1 HSPs)
scaffold0320 (139-219)||(19484-19565)
[»] scaffold0024 (2 HSPs)
scaffold0024 (55-92)||(145981-146018)
scaffold0024 (36-137)||(160298-160399)


Alignment Details
Target: chr2 (Bit Score: 110; Significance: 1e-55; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 43 - 219
Target Start/End: Complemental strand, 11938989 - 11938813
Alignment:
Q  43 aggagattggcgaggcatcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctataccatcaatctcagagaaaatttta 142  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||  | |||||||||||||||  || |||||||||||||||||||||    
T  11938989 aggagattggtgaggcatcaaggggaagaaacgatatcgcaactaggttggcacattagagaacccctatcctagtccgtcaatctcagagaaaatttta 11938890  T
Q  143 ggttaaagtgcacttttcca-ccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    || ||||||||||||||||| |||||||||| |||||||||||||||| | ||||||| |||||||| ||||||||||    
T  11938889 ggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttggtctcctaagtacaaaaa-tataattttg 11938813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 18868916 - 18869001
Alignment:
Q  135 aaattttaggttaaagtgcacttttccaccc-taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||| ||||| ||||||| |||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||| |||||||    
T  18868916 aaatattaggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggcctcctaaatacaaaaactacaattttg 18869001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 23869638 - 23869560
Alignment:
Q  140 ttaggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    ||||| ||||||||||||||||||||| ||||||||||| ||||||||||| ||| ||||||||||||||||| ||||||    
T  23869638 ttaggctaaagtgcacttttccacccttaactttaaaaa-cttgcaattttggccccctaaatacaaaaactacaatttt 23869560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 36451027 - 36450947
Alignment:
Q  137 attttaggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattt 217  Q
    ||||||||||||||||||||||||| || ||||||| |||||||||||||||| | | ||||| |||| |||||| |||||    
T  36451027 attttaggttaaagtgcacttttcccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaattt 36450947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 7898689 - 7898768
Alignment:
Q  141 taggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||| || | |||||| |||||||    
T  7898689 taggttaaagtgcacttttctccccttaactttcaaaaacttgcaatttttgcctcctaagtatagaaactacaattttg 7898768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 36449776 - 36449855
Alignment:
Q  141 taggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||| |||||||||||||||| |||| |||||| |||||||||||||||| ||| ||||| ||||||||||| |||||||    
T  36449776 taggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttg 36449855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 219
Target Start/End: Original strand, 16446149 - 16446231
Alignment:
Q  138 ttttaggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||| ||||||||| ||||| ||||| |||||| ||||||||||||||||  |||| ||||||||||||||| |||||||    
T  16446149 ttttaggctaaagtgcatttttctacccttaactttcaaaaacttgcaattttaacctcataaatacaaaaactacaattttg 16446231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 22848194 - 22848268
Alignment:
Q  146 taaagtgcactttt-ccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||| || |||||||||| |||||||||||||||| | | ||||||||||||||||| |||||||    
T  22848194 taaagtgcacttttacccccctaactttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttg 22848268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 27206367 - 27206461
Alignment:
Q  36 ctaagtcaggagattggcgaggcatcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctataccatcaatctca 130  Q
    ||||| |||||||||||  |||||||| ||||||||||| | ||| ||||||||||||||| ||  |||||||| ||||||| || |||||||||    
T  27206367 ctaagccaggagattggacaggcatcagggggaagcaacaacatcccaactaggttggcaccccgcagaacccccatcctatgccgtcaatctca 27206461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 38840596 - 38840518
Alignment:
Q  141 taggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    |||| |||||||||||||||| |||| |||||| |||||||||||||||| ||| ||||| ||||||||||| ||||||    
T  38840596 taggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaatttt 38840518  T

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Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 218
Target Start/End: Complemental strand, 18906093 - 18906012
Alignment:
Q  138 ttttaggttaaagtgcacttttccacc-ctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    ||||||| |||||||||||||||| |  |||||||| |||||||||||||||| ||| ||||| ||||||||||| ||||||    
T  18906093 ttttaggctaaagtgcacttttccccttctaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaatttt 18906012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 1033214 - 1033284
Alignment:
Q  146 taaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattt 217  Q
    ||||||| |||||||| |||||||||| |||||||||||||||| ||| ||||||||| |||| ||||||||    
T  1033214 taaagtgtacttttcccccctaacttttaaaaacttgcaattttggcc-cctaaataccaaaattataattt 1033284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 18299367 - 18299450
Alignment:
Q  137 attttaggttaaagtgcacttttccaccc-taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||| || |||||||||||||||||||| ||||||| |||||||| ||||||| ||| ||||| || |||||||| |||||||    
T  18299367 atttttggctaaagtgcacttttccacccgtaactttcaaaaactttcaattttggccacctaagtataaaaactacaattttg 18299450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 13567971 - 13568049
Alignment:
Q  142 aggttaaagtgcacttttccacc-ctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||||| |||||||| |  |||| ||| |||||||||||||||| ||| ||||||||||||||||| |||||||    
T  13567971 aggttaaagtgtacttttccccttctaagtttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttg 13568049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 218
Target Start/End: Complemental strand, 7899988 - 7899907
Alignment:
Q  138 ttttaggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    ||||||| |||||||||||||||| |||| |||||| |||||||||||||||| | | ||||| |||| |||||| ||||||    
T  7899988 ttttaggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaatttt 7899907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 18904364 - 18904444
Alignment:
Q  140 ttaggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||| |||||||||||||||| |||| |||||| |||||| ||||||||| ||| | ||| ||||||||||| |||||||    
T  18904364 ttaggctaaagtgcacttttccccccttaactttcaaaaacgtgcaattttggccccttaagtacaaaaactacaattttg 18904444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 13570655 - 13570581
Alignment:
Q  146 taaagtgcacttttccaccc-taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||| ||||| |||| ||||||| |||||||||||||||| | | | ||| |||||||||||||||||||    
T  13570655 taaagtgcatttttctacccataactttcaaaaacttgcaattttagtcccttaagtacaaaaactataattttg 13570581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 142
Target Start/End: Original strand, 20374110 - 20374208
Alignment:
Q  44 ggagattggcgaggcatcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctataccatcaatctcagagaaaatttta 142  Q
    |||||||||  || ||||||||||||||||||| ||| ||||||||||| ||| ||  |||||||| ||||||| |   ||| |||||| |||||||||    
T  20374110 ggagattggacagacatcaaggggaagcaacgacatcccaactaggttgccaccccgcagaacccccatcctatgctgccaaactcagataaaatttta 20374208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 219
Target Start/End: Original strand, 38839237 - 38839319
Alignment:
Q  138 ttttaggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||| ||||||||| |||| | |||| || ||| |||||||||||||||| ||| ||||| ||||||||||| |||||||    
T  38839237 ttttaggctaaagtgcattttttcccccttaattttcaaaaacttgcaattttagccccctaactacaaaaactacaattttg 38839319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 802688 - 802615
Alignment:
Q  146 taaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||| |||||||| |||||| ||| |||||||||||||||| ||| |||   ||||||||||| |||||||    
T  802688 taaagtgtacttttcccccctaagtttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttg 802615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 11258889 - 11258836
Alignment:
Q  165 ctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    |||||||| |||||||||||||||| ||| ||||| ||||||||||| ||||||    
T  11258889 ctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaatttt 11258836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 18300820 - 18300748
Alignment:
Q  146 taaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||| ||||||||||| |||||||||| | ||||||||||||||  || ||||| ||||||||||| |||||||    
T  18300820 taaattgcacttttcc-ccctaactttcataaacttgcaattttgaccccctaagtacaaaaactacaattttg 18300748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 130
Target Start/End: Original strand, 3914252 - 3914324
Alignment:
Q  58 catcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctataccatcaatctca 130  Q
    |||||||| |||||||||| ||| ||||||||||||||| || | |||| |  |||||||||| |||||||||    
T  3914252 catcaaggagaagcaacgacatcccaactaggttggcaccccgatgaactctcatcctataccgtcaatctca 3914324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 13030295 - 13030365
Alignment:
Q  146 taaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    |||||||||||||||| |||||||||| ||||||||| |||||| ||| ||||| |||||||| || ||||||    
T  13030295 taaagtgcacttttcc-ccctaactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaatttt 13030365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 18797244 - 18797294
Alignment:
Q  141 taggttaaagtgcacttttccaccc--taactttaaaaaacttgcaatttt 189  Q
    |||| ||||||||||||||||||||  ||||||| ||||||||||||||||    
T  18797244 taggctaaagtgcacttttccaccccctaactttcaaaaacttgcaatttt 18797294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 199
Target Start/End: Complemental strand, 21837351 - 21837299
Alignment:
Q  146 taaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaa 199  Q
    |||||||||||||| | |||||||||| |||||||||||||||| ||| |||||    
T  21837351 taaagtgcactttttc-ccctaactttcaaaaacttgcaattttggccccctaa 21837299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 22588062 - 22587978
Alignment:
Q  135 aaattttaggttaaagtgcacttttccaccc-taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||| ||| ||||||||| |||||| | | ||||||| |||||||||||||||| ||| ||||  ||||||||||| |||||||    
T  22588062 aaatttaaggctaaagtgcatttttcccctcataactttcaaaaacttgcaattttggcc-cctatgtacaaaaactacaattttg 22587978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 32739644 - 32739700
Alignment:
Q  163 ccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||| |||||||||||||||| ||| | ||  ||||||||||| |||||||    
T  32739644 ccctaactttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttg 32739700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 1e-27; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 36 - 142
Target Start/End: Original strand, 33064805 - 33064911
Alignment:
Q  36 ctaagtcaggagattggcgaggcatcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctataccatcaatctcagagaa 135  Q
    ||||| |||||||||||  |||||||||||||||||||||| ||| ||||||||||||||| ||  |||||||| ||||||||||  |||||||||||||    
T  33064805 ctaagccaggagattggacaggcatcaaggggaagcaacgacatcccaactaggttggcaccccgcagaacccccatcctataccgccaatctcagagaa 33064904  T
Q  136 aatttta 142  Q
    |||||||    
T  33064905 aatttta 33064911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 133 - 219
Target Start/End: Complemental strand, 45150081 - 45149995
Alignment:
Q  133 gaaaattttaggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||| | ||| ||||||||| | |||||||    
T  45150081 gaaaattttaggttaaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccttaagtacaaaaacaacaattttg 45149995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 23980570 - 23980490
Alignment:
Q  140 ttaggttaaagtgcacttttccacc-ctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||| |||||||||||||||| || ||||||||||||||||||||||||| ||  ||||| |||||||||||||||||||    
T  23980570 ttaggctaaagtgcacttttccccctctaactttaaaaaacttgcaattttggctccctaagtacaaaaactataattttg 23980490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 14999283 - 14999361
Alignment:
Q  141 taggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||| ||||||| |||||||| |||||||||| ||||||||||||||||  || ||||| ||||||||||| |||||||    
T  14999283 taggctaaagtgtacttttcccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttg 14999361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 41917172 - 41917070
Alignment:
Q  36 ctaagtcaggagattggcgaggcatcaagggg-aagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctataccatcaatctcagaga 134  Q
    ||||| |||||||||||  ||||||||||||| ||||||| | ||| ||||||||||||||| ||  |||||||| ||||||| || ||||||||||| |    
T  41917172 ctaagccaggagattggacaggcatcaagggggaagcaacaacatcccaactaggttggcaccccggagaacccccatcctatgccgtcaatctcagata 41917073  T
Q  135 aaa 137  Q
    |||    
T  41917072 aaa 41917070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 24426177 - 24426100
Alignment:
Q  142 aggttaaagtgcacttttccacc-ctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    ||||||||||||||||| || || |||||||| |||||||||||||||| ||| ||||| ||||||||||| ||||||    
T  24426177 aggttaaagtgcactttcccccctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaatttt 24426100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 43058784 - 43058861
Alignment:
Q  141 taggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    ||||||||||| ||||||| | |||||||||| ||||||||||||||||  || ||||| ||||||||||| ||||||    
T  43058784 taggttaaagtacactttttccccctaactttgaaaaacttgcaattttgaccccctaagtacaaaaactacaatttt 43058861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 50680330 - 50680407
Alignment:
Q  141 taggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    |||||||||||||| |||||| || ||||||  |||||||||||||||| ||| ||||| || |||||||||||||||    
T  50680330 taggttaaagtgcatttttcccccttaacttccaaaaacttgcaattttggccccctaagtataaaaactataatttt 50680407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 209
Target Start/End: Original strand, 41364823 - 41364895
Alignment:
Q  137 attttaggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaac 209  Q
    ||||| || |||||||||||||||  |||||||||| |||||||||||||||| ||| ||||||||| |||||    
T  41364823 atttttggctaaagtgcacttttctcccctaactttcaaaaacttgcaattttggccccctaaataccaaaac 41364895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 7674526 - 7674603
Alignment:
Q  141 taggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||| |||||||| ||||||| |||||||||| |||||||||||||||| | | ||||| ||||||||||| |||||||    
T  7674526 taggctaaagtgcccttttcccccctaacttttaaaaacttgcaattttgggc-cctaagtacaaaaactacaattttg 7674603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 219
Target Start/End: Original strand, 24422795 - 24422877
Alignment:
Q  138 ttttaggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||| |||||||||||||| | |||| |||||| ||||||||||||||||  || ||||| ||||||||||| |||||||    
T  24422795 ttttaggctaaagtgcacttttacccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttg 24422877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 52274971 - 52275045
Alignment:
Q  146 taaagtgcactttt-ccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||| || |||||||||| ||||||||||||||||  || ||||| ||||||||||| |||||||    
T  52274971 taaagtgcacttttacccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttg 52275045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 142
Target Start/End: Original strand, 21487822 - 21487927
Alignment:
Q  37 taagtcaggagattggcgaggcatcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctataccatcaatctcagagaaa 136  Q
    |||| ||||||| |||  |||||||||| |||||  |||| ||| ||||||||||||||| || ||||||||| ||||||| ||  ||| ||||||||||    
T  21487822 taagccaggagagtggacaggcatcaagaggaagtgacgacatcccaactaggttggcaccccgaagaacccccatcctatgccgccaaactcagagaaa 21487921  T
Q  137 atttta 142  Q
    | ||||    
T  21487922 aattta 21487927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 39699864 - 39699791
Alignment:
Q  146 taaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||||| |||||||||| || |||||||||||||  || ||||| |||| |||||| |||||||    
T  39699864 taaagtgcacttttcccccctaactttcaataacttgcaattttgaccccctaagtacagaaactacaattttg 39699791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 45157306 - 45157233
Alignment:
Q  146 taaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||||||| || |||||| ||| |||||||||||||||| ||| ||||  ||||||||||| |||||||    
T  45157306 taaagtgcactttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttg 45157233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 19274336 - 19274265
Alignment:
Q  36 ctaagtcaggagattggcgaggcatcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacc 107  Q
    ||||| ||||||||||| ||||||||||||| |||| ||||  || ||||||||||||||| || |||||||    
T  19274336 ctaagccaggagattggtgaggcatcaagggcaagcgacgaattcccaactaggttggcaccccgaagaacc 19274265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 219
Target Start/End: Complemental strand, 11437305 - 11437223
Alignment:
Q  138 ttttaggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||| |||||||||||||| | |||| |||||| |||||||||||||||| | | | ||| ||||||||||| |||||||    
T  11437305 ttttaggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttg 11437223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 36614002 - 36613928
Alignment:
Q  146 taaagtgcacttttccaccc-taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||| |||||| ||| ||||||| ||||||||| |||||| ||| ||||| ||||||||||| |||||||    
T  36614002 taaagtgcatttttcctcccctaacttttaaaaacttgtaattttggccccctaagtacaaaaactacaattttg 36613928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 39698566 - 39698640
Alignment:
Q  146 taaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||||||| || |||| |||||| |||||||| ||||||| ||| ||||| |||| ||||||||||||||    
T  39698566 taaagtgcactttaccccccttaacttttaaaaactttcaattttggccccctaagtacagaaactataattttg 39698640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 44404466 - 44404519
Alignment:
Q  166 taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||| ||||||| |||||||| ||| ||||| |||||||||||||||||||    
T  44404466 taactttcaaaaactagcaattttagccccctaagtacaaaaactataattttg 44404519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 17122900 - 17122816
Alignment:
Q  58 catcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctataccatcaatctcagagaaaatttta 142  Q
    |||||||| |||||||||| ||| ||||||||||||||| ||  |||||||  ||||||| ||  ||| |||||| |||||||||    
T  17122900 catcaaggagaagcaacgacatcccaactaggttggcaccccgcagaaccctcatcctatgccgccaaactcagaaaaaatttta 17122816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 189
Target Start/End: Original strand, 35594220 - 35594264
Alignment:
Q  146 taaagtgcacttttccaccc-taactttaaaaaacttgcaatttt 189  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||    
T  35594220 taaagtgcacttttccacccctaactttcaaaaacttgcaatttt 35594264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 52828176 - 52828124
Alignment:
Q  138 ttttaggttaaagtgcacttttccacc-ctaactttaaaaaacttgcaatttt 189  Q
    |||||||||||||||||||||||| || |||| ||| ||||||||||||||||    
T  52828176 ttttaggttaaagtgcacttttccccctctaattttcaaaaacttgcaatttt 52828124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 51685872 - 51685789
Alignment:
Q  137 attttaggttaaagtgcacttttccacc-ctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||| |||||||||||||||| || |||||||| ||||| |||| ||||| |||  |||  ||||||||||| |||||||    
T  51685872 attttaggctaaagtgcacttttccccctctaactttcaaaaagttgcgattttggccctctatgtacaaaaactacaattttg 51685789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 11436045 - 11436119
Alignment:
Q  146 taaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||||| || | |||||| |||||||||||||||| ||||  ||| || |||||||| |||||||    
T  11436045 taaagtgcacttttccccctttaactttcaaaaacttgcaattttggccttttaagtataaaaactacaattttg 11436119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 219
Target Start/End: Complemental strand, 37526979 - 37526901
Alignment:
Q  142 aggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||||| |||||||| |||| |||||| |||||||||||||||| ||  |||||||| | |||| | |||||||    
T  37526979 aggttaaagtgtacttttccccccttaactttcaaaaacttgcaattttggctccctaaatatagaaaccacaattttg 37526901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 219
Target Start/End: Complemental strand, 39153218 - 39153140
Alignment:
Q  142 aggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||||||| | |||| || ||| |||||||||||||||| ||| | ||  ||||||||||| |||||||    
T  39153218 aggttaaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttg 39153140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 51684369 - 51684443
Alignment:
Q  146 taaagtgcacttttccaccc-taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||||| ||| ||||||| ||||| |||||||||| ||| ||||  || |||||||| |||||||    
T  51684369 taaagtgcacttttccccccttaacttttaaaaagttgcaattttggccccctatgtataaaaactacaattttg 51684443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 52276266 - 52276192
Alignment:
Q  141 taggttaaagtgcacttttccacc-ctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataa 214  Q
    |||||||||||||||||| || |  |||||||| ||||| ||| |||||| ||| ||||| ||||||||||||||    
T  52276266 taggttaaagtgcactttcccccttctaactttcaaaaatttgtaattttggccccctaagtacaaaaactataa 52276192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 7675536 - 7675483
Alignment:
Q  166 taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||| ||||||||||||||||  |||||||| || ||||| ||||||||||    
T  7675536 taactttcaaaaacttgcaattttgccctcctaagtaaaaaaattataattttg 7675483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 7983048 - 7983105
Alignment:
Q  141 taggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctccta 198  Q
    ||||||||||||||||||||  || ||||||| || ||||||||||||| ||| ||||    
T  7983048 taggttaaagtgcacttttctcccgtaactttcaacaacttgcaattttggcccccta 7983105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 219
Target Start/End: Original strand, 39151927 - 39152008
Alignment:
Q  139 tttaggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||||| |||| | |||| || ||| ||||||||| |||||| ||| ||||  ||||||||||| |||||||    
T  39151927 tttaggttaaagtgcattttttcccccttaagtttcaaaaacttgtaattttggccccctatgtacaaaaactacaattttg 39152008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 211
Target Start/End: Complemental strand, 39222572 - 39222505
Alignment:
Q  146 taaagtgcacttttccaccct--aactttaaaaaacttgcaatttttgcctcctaaatacaaaaacta 211  Q
    |||||||||||||| | ||||  |||||| |||||||||||||||| ||| ||||| || ||||||||    
T  39222572 taaagtgcacttttaccccctttaactttcaaaaacttgcaattttggccccctaagtataaaaacta 39222505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 189
Target Start/End: Original strand, 52827350 - 52827394
Alignment:
Q  146 taaagtgcacttttccaccc-taactttaaaaaacttgcaatttt 189  Q
    |||||||||||||||| ||| ||||||| ||||||||||||||||    
T  52827350 taaagtgcacttttccccccctaactttcaaaaacttgcaatttt 52827394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 6e-24; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 29931219 - 29931303
Alignment:
Q  136 aattttaggttaaagtgcacttttccaccc-taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||| |||| |||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||| |||||||    
T  29931219 aattataggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttg 29931303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 29980373 - 29980457
Alignment:
Q  136 aattttaggttaaagtgcacttttccaccc-taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||| |||| |||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||| |||||||    
T  29980373 aattataggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttg 29980457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 7268929 - 7268851
Alignment:
Q  141 taggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||| || | |||||| |||||||    
T  7268929 taggttaaagtgcacttttcccccctaactttcaaaaacttgcaattttggcctcctaagtatagaaactacaattttg 7268851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 219
Target Start/End: Original strand, 7267639 - 7267720
Alignment:
Q  138 ttttaggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||||||||||||| || ||||||| |||||||||||||||| ||| ||||| |||| |||||| |||||||    
T  7267639 ttttaggttaaagtgcacttttcccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttg 7267720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 137 - 219
Target Start/End: Original strand, 12700169 - 12700250
Alignment:
Q  137 attttaggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||| ||||||||||||| || |||||||||| |||||||||||||||| ||| ||||| ||||||||||| |||||||    
T  12700169 attttaggctaaagtgcactttccc-ccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttg 12700250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 54539758 - 54539832
Alignment:
Q  146 taaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||  || ||||||||||||||||| |||||||    
T  54539758 taaagtgcacttttccacccttaactttcaaaaacttgcaattttaaccccctaaatacaaaaactacaattttg 54539832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 8456481 - 8456554
Alignment:
Q  146 taaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||| | |||||| ||| |||||||||||||||| | | ||||||||||||||||| |||||||    
T  8456481 taaagtgcactttttccccctaattttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttg 8456554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 218
Target Start/End: Complemental strand, 5029788 - 5029708
Alignment:
Q  138 ttttaggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    ||||||| |||||||||||||||| ||||| |||| |||| ||||||||||| ||||||||| ||| ||||| | ||||||    
T  5029788 ttttaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcctcctaagtaccaaaaccacaatttt 5029708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 142
Target Start/End: Complemental strand, 7165094 - 7164995
Alignment:
Q  43 aggagattggcgaggcatcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctataccatcaatctcagagaaaatttta 142  Q
    ||||||||||||||||||||||| ||||| | || ||| |||||||||| |||| || |||||||   |||||||||   |||||||| |||||||||||    
T  7165094 aggagattggcgaggcatcaaggtgaagcgatgacatcccaactaggttagcaccccgaagaaccttcatcctatactgccaatctcaaagaaaatttta 7164995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 11671444 - 11671373
Alignment:
Q  140 ttaggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaacta 211  Q
    ||||| |||||||||||||| |  ||||||||| |||||||||||||||| ||| |||||||| ||||||||    
T  11671444 ttaggctaaagtgcactttttccgcctaactttcaaaaacttgcaattttagccccctaaatataaaaacta 11671373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 55 - 130
Target Start/End: Complemental strand, 19185150 - 19185075
Alignment:
Q  55 aggcatcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctataccatcaatctca 130  Q
    ||||||||||| |||||||||| ||| ||||||||||||||| || |||||| || ||||||||||| ||| ||||    
T  19185150 aggcatcaaggagaagcaacgacatcccaactaggttggcaccccgaagaactcccatcctataccaccaaactca 19185075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 29932796 - 29932723
Alignment:
Q  146 taaagtgcacttttccacc-ctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||||| || |||||||| |||||||||||||||| ||| ||||| ||||||||||| |||||||    
T  29932796 taaagtgcacttttccccctctaactttcaaaaacttgcaattttggcc-cctaagtacaaaaactacaattttg 29932723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 29981950 - 29981877
Alignment:
Q  146 taaagtgcacttttccacc-ctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||||| || |||||||| |||||||||||||||| ||| ||||| ||||||||||| |||||||    
T  29981950 taaagtgcacttttccccctctaactttcaaaaacttgcaattttggcc-cctaagtacaaaaactacaattttg 29981877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 219
Target Start/End: Original strand, 24516464 - 24516537
Alignment:
Q  147 aaagtgcactttt-ccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||||||| || ||||||||||||||||||||||||||| ||  ||||| || |||||||| |||||||    
T  24516464 aaagtgcactttttcccccctaactttaaaaaacttgcaattttggcaccctaagtataaaaactacaattttg 24516537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 209
Target Start/End: Complemental strand, 47610683 - 47610614
Alignment:
Q  141 taggttaaagtgcacttttccacc-ctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaac 209  Q
    ||||||||||||||||||||| || |||||||| |||||||||||||||| ||| ||||| ||| |||||    
T  47610683 taggttaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaac 47610614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 218
Target Start/End: Original strand, 7758398 - 7758478
Alignment:
Q  139 tttaggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    |||||| |||||||||||||| | |||| |||||| ||||||||||||||||  || ||||| ||||||||||| ||||||    
T  7758398 tttaggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttt 7758478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 19984847 - 19984926
Alignment:
Q  141 taggttaaagtgcacttttccaccc-taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||| |||||||||||||||| ||| ||| ||| |||||||||||||||| ||| ||||  ||||||||||| |||||||    
T  19984847 taggctaaagtgcacttttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttg 19984926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 22776915 - 22776836
Alignment:
Q  141 taggttaaagtgcacttttccaccc-taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||| |||||||||||||||||||| ||||||| | ||| |||||||||| ||| ||||  ||||||||||| |||||||    
T  22776915 taggctaaagtgcacttttccacccctaactttcagaaagttgcaattttggccccctatgtacaaaaactacaattttg 22776836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 54540888 - 54540814
Alignment:
Q  146 taaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||||| |||| |||||| ||||||||||||||||  || | ||| ||||||||||| |||||||    
T  54540888 taaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttg 54540814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 142
Target Start/End: Original strand, 10287681 - 10287766
Alignment:
Q  57 gcatcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctataccatcaatctcagagaaaatttta 142  Q
    ||||||||||||||||| |  ||| ||||||||||||||| ||  | ||| || ||||||||||   |||||||||||||||||||    
T  10287681 gcatcaaggggaagcaatggcatcccaactaggttggcaccccgcaaaactcccatcctataccgataatctcagagaaaatttta 10287766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 12703597 - 12703524
Alignment:
Q  146 taaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||| | | |||||||| ||||| ||| |||||| ||| ||||| ||||||||||| |||||||    
T  12703597 taaagtgcactttttccctctaactttcaaaaatttgtaattttggccccctaagtacaaaaactacaattttg 12703524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 20952481 - 20952380
Alignment:
Q  36 ctaagtcaggagattggcgaggcatcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctataccatcaatctcagagaa 135  Q
    ||||| || ||||||||  | |||||| ||||||| ||||| ||| ||||||||||||||| ||  |||||||| |||||||  || |||||||||| ||    
T  20952481 ctaagccatgagattggacaagcatcagggggaagtaacgacatcccaactaggttggcaccccgcagaacccccatcctatggcaccaatctcagataa 20952382  T
Q  136 aa 137  Q
    ||    
T  20952381 aa 20952380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 47615653 - 47615592
Alignment:
Q  139 tttaggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaa 199  Q
    |||||| |||||||||||||||| |||| |||||| |||||||||||||||| ||| |||||    
T  47615653 tttaggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaa 47615592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 534496 - 534576
Alignment:
Q  140 ttaggttaaagtgcacttttccacc-ctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||| |||||||||||||| | || |||||| | ||||||||||||||||  |||||||  ||||||||||| |||||||    
T  534496 ttaggctaaagtgcactttttcccctctaactctcaaaaacttgcaattttgacctcctatgtacaaaaactacaattttg 534576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 219
Target Start/End: Complemental strand, 51038902 - 51038814
Alignment:
Q  132 agaaaattttaggttaaagtgcacttttccaccc-taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||| | |||| |||||||||||||||||||| ||||||| ||||| ||||||||||  || ||||   |||||||||| |||||||    
T  51038902 agaaaaatataggctaaagtgcacttttccacccttaacttttaaaaagttgcaattttgaccccctatgaacaaaaactacaattttg 51038814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 188
Target Start/End: Complemental strand, 51470558 - 51470510
Alignment:
Q  140 ttaggttaaagtgcacttttccaccctaactttaaaaaacttgcaattt 188  Q
    ||||| ||||||||||| |||| |||||||||| |||||||||||||||    
T  51470558 ttaggctaaagtgcactcttcccccctaactttcaaaaacttgcaattt 51470510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 54987114 - 54987031
Alignment:
Q  135 aaattttaggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||| |||||||||||||||||||| |||||| ||| ||||| |||| ||||| | | ||||  || ||||||||||||||||    
T  54987114 aaatttaaggttaaagtgcacttttcc-ccctaagtttcaaaaagttgcgattttagtcccctatgtataaaaactataattttg 54987031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 52104480 - 52104554
Alignment:
Q  142 aggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||| ||||||||||| |||||||||| ||||| ||| |||||| |  |||||  |||||||||||||||||||    
T  52104480 aggttaaaatgcacttttcc-ccctaactttcaaaaagttgtaattttgg--tcctatgtacaaaaactataattttg 52104554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 535880 - 535807
Alignment:
Q  146 taaagtgcacttttccaccc-taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||| | | | ||| ||  ||||||||||||||    
T  535880 taaagtgtacttttccacccctaactttcaaaaacttgcaattttggtcccttaagtattaaaactataatttt 535807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 47609691 - 47609744
Alignment:
Q  137 attttaggttaaagtgcacttttccaccc-taactttaaaaaacttgcaatttt 189  Q
    |||||||| |||| ||||||||||| ||| ||||||| ||||||||||||||||    
T  47609691 attttaggctaaaatgcacttttccccccctaactttcaaaaacttgcaatttt 47609744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 55192072 - 55192019
Alignment:
Q  166 taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||| |||||||||||||||| |||  |||| ||||||||||| |||||||    
T  55192072 taactttcaaaaacttgcaattttggccctctaagtacaaaaactacaattttg 55192019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 27636905 - 27636941
Alignment:
Q  56 ggcatcaaggggaagcaacgatatcgcaactaggttg 92  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  27636905 ggcatcaaggggaagcaacgacatcccaactaggttg 27636941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 27639974 - 27640010
Alignment:
Q  56 ggcatcaaggggaagcaacgatatcgcaactaggttg 92  Q
    |||||||| |||||||||||| |||||||||||||||    
T  27639974 ggcatcaaagggaagcaacgacatcgcaactaggttg 27640010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 216
Target Start/End: Original strand, 49216237 - 49216321
Alignment:
Q  133 gaaaattttaggttaaagtgcacttttccac-cctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatt 216  Q
    |||| |||| || |||||||||||||||||| ||||| ||| ||||| ||||||||||  || ||||  ||||||||||| ||||    
T  49216237 gaaattttttggctaaagtgcacttttccacgcctaagtttcaaaaagttgcaattttgaccccctatgtacaaaaactacaatt 49216321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 51469975 - 51470039
Alignment:
Q  146 taaagtgcacttttcca-ccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaac 209  Q
    ||||||||||||||||  |||||| ||| |||||||||||||||| ||| ||||| ||| |||||    
T  51469975 taaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaac 51470039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 5e-21; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 135 - 218
Target Start/End: Original strand, 24122875 - 24122958
Alignment:
Q  135 aaattttaggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    |||||||||| ||||||||| |||||| |||||||||||||||| ||||||||||  || ||||| ||||||||||||||||||    
T  24122875 aaattttaggctaaagtgcatttttcccccctaactttaaaaaatttgcaattttgaccccctaagtacaaaaactataatttt 24122958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 5514373 - 5514294
Alignment:
Q  140 ttaggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||| ||||||||||||||   |||||| |||||||||||||||||||| |||| |||||||||||||||| |||||||    
T  5514373 ttaggctaaagtgcacttttatcccctaattttaaaaaacttgcaattttagccttctaaatacaaaaactacaattttg 5514294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 141
Target Start/End: Original strand, 17275573 - 17275677
Alignment:
Q  36 ctaagtcaggagattggcgaggcatcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctataccatcaatctcagagaa 135  Q
    ||||| ||||| |||||  ||||||||| |||||||||||| ||| |||||| || ||||| ||  |||||||| ||||||||||| |||||||||||||    
T  17275573 ctaagccaggatattggacaggcatcaacgggaagcaacgacatcccaactaagt-ggcaccccgcagaacccccatcctataccaccaatctcagagaa 17275671  T
Q  136 aatttt 141  Q
    ||||||    
T  17275672 aatttt 17275677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 29968436 - 29968364
Alignment:
Q  144 gttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatt 216  Q
    |||||||||||||||||| || ||||||| |||||||||||||||| ||| ||||| ||||||||||| ||||    
T  29968436 gttaaagtgcacttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaatt 29968364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 5513980 - 5514058
Alignment:
Q  141 taggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||| |||||||||||||| | |||||||||| |||||||| ||||||| ||| ||||| ||||||||||| |||||||    
T  5513980 taggctaaagtgcacttttaccccctaactttcaaaaacttccaattttggccccctaagtacaaaaactacaattttg 5514058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 12353457 - 12353385
Alignment:
Q  146 taaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||||| || ||||||| |||||||||||||||| ||| ||||| ||| |||||||||||||||    
T  12353457 taaagtgcacttttcccccttaactttcaaaaacttgcaattttggccccctaagtac-aaaactataattttg 12353385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 43848087 - 43848188
Alignment:
Q  36 ctaagtcaggagattggcgaggcatcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctataccatcaatctcagagaa 135  Q
    ||||| |||||||||||  |||||||||||||||||||| | ||| ||||||||||||||| ||  |||||||  ||||||| ||  |||||||||| ||    
T  43848087 ctaagccaggagattggacaggcatcaaggggaagcaacaacatcccaactaggttggcaccccgcagaaccctcatcctatgccgccaatctcagataa 43848186  T
Q  136 aa 137  Q
    ||    
T  43848187 aa 43848188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 11287779 - 11287853
Alignment:
Q  146 taaagtgcacttttccaccc-taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||| ||||| |||||||||||||||||||||||| |||  |||| |||| |||||| |||||||    
T  11287779 taaagtgcactttttcacccctaactttaaaaaacttgcaattttggcccactaagtacagaaactacaattttg 11287853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 18979218 - 18979144
Alignment:
Q  146 taaagtgcacttttccaccc-taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||||| ||| ||||||| || ||||||||||||| ||| |||||||| |||||||| |||||||    
T  18979218 taaagtgcacttttccccccctaactttcaacaacttgcaattttggccccctaaatataaaaactacaattttg 18979144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 8388467 - 8388539
Alignment:
Q  146 taaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||||||| || |||||||||| ||||| |||||||||| ||| ||||  |||||||||||||||||||    
T  8388467 taaagtgcactttccc-ccctaacttttaaaaagttgcaattttagccccctatgtacaaaaactataattttg 8388539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 219
Target Start/End: Original strand, 18970906 - 18970987
Alignment:
Q  138 ttttaggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||| ||  |||||||||| |||||||||| |||| ||| ||||||| ||| ||||| ||||||||||| |||||||    
T  18970906 ttttaggtttaatagcacttttcccccctaactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttg 18970987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 219
Target Start/End: Original strand, 18978015 - 18978096
Alignment:
Q  138 ttttaggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||| ||  |||||||||| |||||||||| |||| ||| ||||||| ||| ||||| ||||||||||| |||||||    
T  18978015 ttttaggtttaatagcacttttcccccctaactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttg 18978096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 30336599 - 30336526
Alignment:
Q  146 taaagtgcactt-ttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    |||||||||||| |||| |||||||||| ||||||||  |||||| ||||||||| ||||||||||| ||||||    
T  30336599 taaagtgcacttcttcccccctaactttcaaaaacttataattttagcctcctaagtacaaaaactacaatttt 30336526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 142
Target Start/End: Original strand, 17279122 - 17279220
Alignment:
Q  43 aggagattggcgaggcatcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctataccatcaatctcagagaaaatttta 142  Q
    ||||||||||  |||||||||   |||||||||  ||| ||||||| | ||||| ||  |||||||| ||||||||||| ||||||||||||||||||||    
T  17279122 aggagattggacaggcatcaaaaagaagcaacggcatcccaactagat-ggcaccccgcagaacccccatcctataccaccaatctcagagaaaatttta 17279220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 22221462 - 22221388
Alignment:
Q  146 taaagtgcacttttccaccc-taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||  || ||||| ||  ||||||| |||||||    
T  22221462 taaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttg 22221388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 22227804 - 22227730
Alignment:
Q  146 taaagtgcacttttccaccc-taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||  || ||||| ||  ||||||| |||||||    
T  22227804 taaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttg 22227730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 13329515 - 13329568
Alignment:
Q  42 caggagattggcgaggcatcaaggggaagcaacgatatcgcaactaggttggca 95  Q
    ||||||||||| ||||||||||||  |||| |||||||| ||||||||||||||    
T  13329515 caggagattggtgaggcatcaaggaaaagcgacgatatctcaactaggttggca 13329568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 28975015 - 28975056
Alignment:
Q  55 aggcatcaaggggaagcaacgatatcgcaactaggttggcac 96  Q
    |||||||||||||||||||||| ||| |||||||||||||||    
T  28975015 aggcatcaaggggaagcaacgacatcccaactaggttggcac 28975056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 137
Target Start/End: Complemental strand, 29043256 - 29043163
Alignment:
Q  44 ggagattggcgaggcatcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctataccatcaatctcagagaaaa 137  Q
    |||||||||  | |||||| ||||||||||||| |||  |||||||||||||| ||| |||| ||  ||||||| ||| |||||||||| ||||    
T  29043256 ggagattggacaagcatcagggggaagcaacgacatccaaactaggttggcaccccacagaatccacatcctatgccaccaatctcagataaaa 29043163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 40471248 - 40471172
Alignment:
Q  142 aggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    |||||||||||||||||||| || | ||||||||||||||| ||||||| | | | ||||||||||||||| ||||||    
T  40471248 aggttaaagtgcacttttccccctttaactttaaaaaacttacaattttggtc-cataaatacaaaaactacaatttt 40471172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 219
Target Start/End: Complemental strand, 1824174 - 1824102
Alignment:
Q  148 aagtgcacttttccacc-ctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||| |||||| || |||||||| |||||||||||||||| | | ||||| ||||||||||| |||||||    
T  1824174 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttg 1824102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 219
Target Start/End: Complemental strand, 1858619 - 1858547
Alignment:
Q  148 aagtgcacttttccacc-ctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||| |||||| || |||||||| |||||||||||||||| | | ||||| ||||||||||| |||||||    
T  1858619 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttg 1858547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 11282006 - 11282074
Alignment:
Q  141 taggttaaagtgcac-ttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaa 208  Q
    ||||||||||||||| |||||| || ||||||| ||||| |||||||||| ||| |||| |||||||||    
T  11282006 taggttaaagtgcactttttcccccttaacttttaaaaagttgcaattttggccccctatatacaaaaa 11282074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 10007866 - 10007807
Alignment:
Q  141 taggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaa 199  Q
    |||| |||||||||||||||| |||| |||||| |||||||||||||||| ||| |||||    
T  10007866 taggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaa 10007807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 191
Target Start/End: Complemental strand, 11288963 - 11288912
Alignment:
Q  141 taggttaaagtgcacttttccaccc-taactttaaaaaacttgcaatttttg 191  Q
    |||| |||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  11288963 taggctaaagtgcactttttcacccctaactttcaaaaacttgcaatttttg 11288912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 199
Target Start/End: Original strand, 10006347 - 10006401
Alignment:
Q  146 taaagtgcacttttccacc-ctaactttaaaaaacttgcaatttttgcctcctaa 199  Q
    |||||||||||||||| || |||||||| |||||||||||||||| ||| |||||    
T  10006347 taaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaa 10006401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 22220391 - 22220465
Alignment:
Q  146 taaagtgcacttttccacc-ctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||||| || |||||||||||| ||||||||||||  || ||||  || |||||||| |||||||    
T  22220391 taaagtgcacttttccccctctaactttaaaatacttgcaattttgaccccctatgtataaaaactacaattttg 22220465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 24359812 - 24359884
Alignment:
Q  146 taaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||| ||||| | | |||||||| ||||| |||| |||||||||| ||| |||||||||||| |||||||    
T  24359812 taaagtgctctttttccctctaacttttaaaaagttgcgatttttgcct-ctatatacaaaaactacaattttg 24359884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 30335642 - 30335715
Alignment:
Q  146 taaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    ||||||||| ||||||||||| |||||| |||||||||||||||| ||   |||| |||||||| || ||||||    
T  30335642 taaagtgcatttttccacccttaacttttaaaaacttgcaattttggctcgctaagtacaaaaattacaatttt 30335715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 32207421 - 32207349
Alignment:
Q  146 taaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||||||| || ||||||| || ||||||||||||||||  |  ||||| ||||||||||| |||||||    
T  32207421 taaagtgcactttccc-ccctaaccttcaaaaacttgcaattttgacgccctaagtacaaaaactacaattttg 32207349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 43856192 - 43856151
Alignment:
Q  55 aggcatcaaggggaagcaacgatatcgcaactaggttggcac 96  Q
    |||||||||||||||| ||||| ||| |||||||||||||||    
T  43856192 aggcatcaaggggaagtaacgacatcccaactaggttggcac 43856151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 24488759 - 24488703
Alignment:
Q  163 ccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||| |||||||||||||||| ||| ||||||||  ||||| | |||||||    
T  24488759 ccctaactttcaaaaacttgcaattttggccccctaaatatcaaaacaacaattttg 24488703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 40263642 - 40263722
Alignment:
Q  37 taagtcaggagattggcgaggcatcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctat 117  Q
    |||| |||||||||||  |||||||| || |||||||| | ||| ||||||||||||||| |   |||||||| |||||||    
T  40263642 taagccaggagattggacaggcatcagggtgaagcaacaacatcccaactaggttggcaccctgcagaacccccatcctat 40263722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 49308129 - 49308051
Alignment:
Q  141 taggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||| |||||||||||||||| |||||||||| |||||||||||||||| ||| ||||| ||||||||||| |||||||    
T  49308129 taggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttg 49308051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 137 - 218
Target Start/End: Complemental strand, 19750681 - 19750600
Alignment:
Q  137 attttaggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    |||||||  |||||||||||||||| |||||||||| |||||||||||||||| ||| ||||| ||||||||||| ||||||    
T  19750681 attttagactaaagtgcacttttcccccctaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaatttt 19750600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 19789125 - 19789206
Alignment:
Q  137 attttaggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    |||||||  |||||||||||||||| |||||||||| |||||||||||||||| ||| ||||| ||||||||||| ||||||    
T  19789125 attttagactaaagtgcacttttcccccctaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaatttt 19789206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 26421725 - 26421646
Alignment:
Q  140 ttaggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||| |||||||||||||||| | |||||||| ||||||||||||||||  |||||||| ||||||||||| |||||||    
T  26421725 ttaggctaaagtgcacttttcccctctaactttcaaaaacttgcaattttgacctcctaagtacaaaaactacaattttg 26421646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 136 - 219
Target Start/End: Complemental strand, 37728672 - 37728589
Alignment:
Q  136 aattttaggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||||||||||||| |||| |  ||||||||| ||||| |||||||||| ||||||||  ||||||||||| |||||||    
T  37728672 aattttaggttaaagtgcattttttcctcctaacttttaaaaagttgcaattttggcctcctatgtacaaaaactacaattttg 37728589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 1963187 - 1963272
Alignment:
Q  134 aaaattttaggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    |||| |||||| |||||||||||||||| |||| |||||| ||||| |||||||||| ||||||||  ||||||||||| ||||||    
T  1963187 aaaagtttaggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttggcctcctatgtacaaaaactacaatttt 1963272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 142
Target Start/End: Complemental strand, 13242274 - 13242175
Alignment:
Q  43 aggagattggcgaggcatcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctataccatcaatctcagagaaaatttta 142  Q
    ||||||||||  |||||||||||||||||||||  |||  |||||||||||||| ||  |||||||| ||||||||||   ||||||| |||||| ||||    
T  13242274 aggagattggacaggcatcaaggggaagcaacggcatccaaactaggttggcaccccgcagaacccccatcctataccgctaatctcaaagaaaaattta 13242175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 219
Target Start/End: Original strand, 8155733 - 8155814
Alignment:
Q  138 ttttaggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgc-ctcctaaatacaaaaactataattttg 219  Q
    ||||| |||||||||||||||||| |||||||||| |||||||||||||||| || | ||||| | ||||||||| |||||||    
T  8155733 ttttatgttaaagtgcacttttcc-ccctaactttcaaaaacttgcaattttagctcccctaagttcaaaaactacaattttg 8155814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 219
Target Start/End: Complemental strand, 8758939 - 8758861
Alignment:
Q  142 aggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||| ||||||||||| |||| |||||| |||||||||||||||| ||| ||||| |||| |||||| |||||||    
T  8758939 aggttaaaatgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttg 8758861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 17382991 - 17383069
Alignment:
Q  141 taggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||| |||||||||||||||  |||||||||| |||||||||||||||| | | | ||| ||||||||||| |||||||    
T  17382991 taggctaaagtgcacttttctcccctaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttg 17383069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 17388313 - 17388235
Alignment:
Q  141 taggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||| |||||||||||||||| |||||||||| |||||||||||||||| | | | ||| |||| |||||| |||||||    
T  17388313 taggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggtcccttaagtacataaactacaattttg 17388235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 219
Target Start/End: Original strand, 31599794 - 31599866
Alignment:
Q  148 aagtgcactttt-ccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||| || |||||||||| ||||||||||||||||  || ||||| ||||||||||| |||||||    
T  31599794 aagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttg 31599866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 1290302 - 1290223
Alignment:
Q  140 ttaggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    ||||| |||||||||||||||| |||| |||||| |||| ||||||||||| |||  |||| ||||||||||| ||||||    
T  1290302 ttaggctaaagtgcacttttccccccttaactttcaaaatcttgcaattttggccctctaagtacaaaaactacaatttt 1290223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 1835205 - 1835126
Alignment:
Q  141 taggttaaagtgcacttttcca-ccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||| ||||||||||||||||| |||||||||| ||||||||||||||||  || ||||| ||  ||||||| |||||||    
T  1835205 taggctaaagtgcacttttccatccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttg 1835126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 8757672 - 8757751
Alignment:
Q  140 ttaggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||| |||||||||||||| | || ||||||| |||||||| ||||||| ||| ||||| |||| |||||| |||||||    
T  8757672 ttaggctaaagtgcactttttccccttaactttcaaaaacttacaattttagccccctaagtacagaaactacaattttg 8757751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 219
Target Start/End: Original strand, 12129625 - 12129700
Alignment:
Q  145 ttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||||||||||| | || |||||| |||||||||||||||| ||| | ||| ||||||||||| |||||||    
T  12129625 ttaaagtgcacttttcccctcttaactttcaaaaacttgcaattttggccccgtaagtacaaaaactacaattttg 12129700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 33310168 - 33310113
Alignment:
Q  164 cctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||| ||||||||| |||||| ||  |||||||||||||||||||||||||    
T  33310168 cctaacttttaaaaacttgtaattttagctccctaaatacaaaaactataattttg 33310113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 52491710 - 52491631
Alignment:
Q  141 taggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||| ||||||| ||||||||||||| |||||| |||||||||||||||| | |  ||||||||| |||||| |||||||    
T  52491710 taggctaaagtgtacttttccacccttaactttcaaaaacttgcaattttggtcctctaaatacagaaactacaattttg 52491631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 55603636 - 55603585
Alignment:
Q  138 ttttaggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttt 189  Q
    |||||||||||||||||||||| | || ||||||| ||||||||||||||||    
T  55603636 ttttaggttaaagtgcactttttccccttaactttcaaaaacttgcaatttt 55603585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 5526228 - 5526170
Alignment:
Q  141 taggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaa 199  Q
    |||| |||||||||||||||| | |||||||| |||||||||||||||| ||| |||||    
T  5526228 taggctaaagtgcacttttcccctctaactttcaaaaacttgcaattttggccccctaa 5526170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 219
Target Start/End: Complemental strand, 21539173 - 21539095
Alignment:
Q  142 aggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||  |||||||||||||| || ||| |||||||||||||||| ||||||||| |  |||||||| |||||||    
T  21539173 aggttaaagcacacttttccacccttaatttttaaaaacttgcaattttggcctcctaagtgtaaaaactacaattttg 21539095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 25685926 - 25685856
Alignment:
Q  140 ttaggttaaagtgcacttttccacc-ctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaac 209  Q
    ||||| |||||||||||||||| || |||||||| |||||||||||||||| ||| ||||| ||| |||||    
T  25685926 ttaggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaac 25685856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 31601083 - 31601009
Alignment:
Q  146 taaagtgcacttttccacc-ctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||| | || |||||||| ||||||||||||||||  || ||||| ||||||||||| |||||||    
T  31601083 taaagtgcactttttcccctctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttg 31601009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 38499835 - 38499936
Alignment:
Q  36 ctaagtcaggagattggcgaggcatcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctataccatcaatctcagagaa 135  Q
    ||||| |||||||||||  |||||||| ||||||||||| | ||| ||||||||||||||| ||  | |||||  ||||||| ||  |||||||||| ||    
T  38499835 ctaagccaggagattggacaggcatcagggggaagcaacaacatcccaactaggttggcaccccgcaaaaccctcatcctatgccgccaatctcagataa 38499934  T
Q  136 aa 137  Q
    ||    
T  38499935 aa 38499936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 219
Target Start/End: Original strand, 49306770 - 49306851
Alignment:
Q  138 ttttaggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||| ||||||||||||||   ||| |||||| |||||||||||||||| |||   ||| ||||||||||| |||||||    
T  49306770 ttttaggctaaagtgcacttttttcccccaactttcaaaaacttgcaattttggccatttaagtacaaaaactacaattttg 49306851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 10471486 - 10471422
Alignment:
Q  146 taaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaac 209  Q
    |||||||||||||||| |||| |||||| |||||||||||||||| ||| ||||| ||| |||||    
T  10471486 taaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtaccaaaac 10471422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 117
Target Start/End: Complemental strand, 20384020 - 20383961
Alignment:
Q  58 catcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctat 117  Q
    ||||||||||||||||||||||| |||||| |||||||   | ||||||||| |||||||    
T  20384020 catcaaggggaagcaacgatatctcaactaagttggcatctcgaagaacccccatcctat 20383961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 33296221 - 33296300
Alignment:
Q  140 ttaggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||||||||| ||||   |||||| ||| ||||||||  |||||| | ||||||| || ||||||||||||||||    
T  33296221 ttaggttaaagtgcattttttttccctaattttcaaaaacttataattttggtctcctaagtataaaaactataattttg 33296300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 1834122 - 1834196
Alignment:
Q  146 taaagtgcacttttccacc-ctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||||| || ||||||||||||||||| |||||||  || ||||  || |||||||| |||||||    
T  1834122 taaagtgcacttttccccctctaactttaaaaaacttacaattttgaccccctatgtataaaaactacaattttg 1834196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 1964539 - 1964465
Alignment:
Q  146 taaagtgcacttttccaccc-taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||||||||| ||||||| ||||| || ||||||| ||| ||||   |||||||||| |||||||    
T  1964539 taaagtgcacttttccacccttaacttttaaaaagttacaattttggccccctatgaacaaaaactacaattttg 1964465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 209
Target Start/End: Original strand, 13386012 - 13386082
Alignment:
Q  141 taggttaaagtgcacttttccacc-ctaacttt-aaaaaacttgcaatttttgcctcctaaatacaaaaac 209  Q
    |||| |||||||||||||||| || |||||||| ||||||||||||||||| ||| ||||| ||| |||||    
T  13386012 taggctaaagtgcacttttccccctctaactttcaaaaaacttgcaattttggccccctaagtaccaaaac 13386082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 189
Target Start/End: Original strand, 48780245 - 48780295
Alignment:
Q  140 ttaggttaaagtgcacttttccaccc-taactttaaaaaacttgcaatttt 189  Q
    ||||| |||||||||||||||| ||| ||||||| ||||||||||||||||    
T  48780245 ttaggctaaagtgcacttttccccccctaacttttaaaaacttgcaatttt 48780295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 91
Target Start/End: Complemental strand, 12714300 - 12714267
Alignment:
Q  58 catcaaggggaagcaacgatatcgcaactaggtt 91  Q
    ||||||||||||||||||||||| ||||||||||    
T  12714300 catcaaggggaagcaacgatatcccaactaggtt 12714267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 35934347 - 35934419
Alignment:
Q  146 taaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||||| |||||||||| ||||||||| |||||| | | ||||| || | ||| ||||||||||    
T  35934347 taaagtgcacttttcc-ccctaactttcaaaaacttgtaattttggtcccctaagtaaagaaattataattttg 35934419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 54110727 - 54110653
Alignment:
Q  142 aggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    ||||||||||| ||||||  | ||||||||||||||| ||||||||||  ||||| |  |||||||| |||||||||    
T  54110727 aggttaaagtgtactttt--atcctaactttaaaaaatttgcaattttgacctccaatgtacaaaaattataatttt 54110653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 189
Target Start/End: Original strand, 10470549 - 10470593
Alignment:
Q  146 taaagtgcacttttccaccct-aactttaaaaaacttgcaatttt 189  Q
    |||||||||||||||| |||| |||||| ||||||||||||||||    
T  10470549 taaagtgcacttttccccccttaactttcaaaaacttgcaatttt 10470593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 189
Target Start/End: Original strand, 25684937 - 25684981
Alignment:
Q  146 taaagtgcacttttccaccc-taactttaaaaaacttgcaatttt 189  Q
    |||||||||||||||| ||| ||||||| ||||||||||||||||    
T  25684937 taaagtgcacttttccccccctaactttcaaaaacttgcaatttt 25684981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 9e-20; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 19752915 - 19752988
Alignment:
Q  146 taaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||||| |||||||||| |||||||||||||||| ||| ||||| ||||||||||| |||||||    
T  19752915 taaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttg 19752988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 219
Target Start/End: Original strand, 25523065 - 25523146
Alignment:
Q  139 tttaggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||| |||||||||||||||| |||| |||||| |||||||||||||||| ||| ||||| ||||||||||| |||||||    
T  25523065 tttaggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttg 25523146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 19754217 - 19754154
Alignment:
Q  156 ttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||| |||||||||| |||||||||||||||| ||| ||||||||||||||||| |||||||    
T  19754217 ttttcccccctaactttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttg 19754154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 36485303 - 36485377
Alignment:
Q  146 taaagtgcacttttccaccc-taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||| |||||||||| |||||||||||||||| |||||||  |||| ||| |||||||||||||||||||    
T  36485303 taaagtgcatttttccacccctaactttaaaaaacttacaattttgacctcttaagtacaaaaactataattttg 36485377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 20216868 - 20216787
Alignment:
Q  139 tttaggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||||||||||||||||| |||| || ||| |||||||||||||||| ||  |||| |||||||||||| |||||||    
T  20216868 tttaggttaaagtgcacttttccccccttaattttcaaaaacttgcaattttagctccctatatacaaaaactacaattttg 20216787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 218
Target Start/End: Original strand, 28538671 - 28538752
Alignment:
Q  138 ttttaggttaaagtgcacttttccaccc-taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    ||||||| |||||||||||||||||||| ||||||| ||||||||||||||||  || | ||| ||||||||||| ||||||    
T  28538671 ttttaggctaaagtgcacttttccacccgtaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaatttt 28538752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 219
Target Start/End: Complemental strand, 28539921 - 28539844
Alignment:
Q  142 aggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||||  ||  |||| ||||||||||| |||||||    
T  28539921 aggttaaagtgcatttttcccccctaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaattttg 28539844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 135 - 209
Target Start/End: Complemental strand, 5778945 - 5778870
Alignment:
Q  135 aaattttaggttaaagtgcacttttccacc-ctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaac 209  Q
    ||||| |||| |||||||||||||||| || |||||||| |||||||||||||||||||| ||||| ||| |||||    
T  5778945 aaattgtaggctaaagtgcacttttccccctctaactttcaaaaacttgcaatttttgccccctaagtaccaaaac 5778870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 1796057 - 1796131
Alignment:
Q  146 taaagtgcacttttccaccc-taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||| |||||||||| ||||||| |||||||||||| ||| ||| ||||| ||||||||||| |||||||    
T  1796057 taaagtgcatttttccacccctaactttcaaaaacttgcaactttggccacctaagtacaaaaactacaattttg 1796131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 16650958 - 16650880
Alignment:
Q  141 taggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    |||| ||||||||||||||||||||| |||||| ||||||||||||||||  || ||||| || |||||||| ||||||    
T  16650958 taggctaaagtgcacttttccacccttaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaatttt 16650880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 22940720 - 22940646
Alignment:
Q  146 taaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||||| |||| |||||| |||||||||||||||| ||| ||||| |||||||| || |||||||    
T  22940720 taaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaattacaattttg 22940646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 219
Target Start/End: Complemental strand, 36486598 - 36486512
Alignment:
Q  134 aaaattttaggttaaagtgcactttt-ccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||| ||| | |||||||||||| || |||||||||| ||||||||||||||||  || ||||| ||||||||||| |||||||    
T  36486598 aaaatttaaggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttg 36486512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 22602016 - 22602110
Alignment:
Q  36 ctaagtcaggagattggcgaggcatcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctataccatcaatctca 130  Q
    ||||| ||| |||||||  || |||||||||||| |||||| ||| ||||||||||||||| ||  |||||||| ||||||| || |||| ||||    
T  22602016 ctaaggcagaagattggacagacatcaaggggaatcaacgacatcccaactaggttggcaccccgcagaacccccatcctatgccgtcaacctca 22602110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 25056479 - 25056405
Alignment:
Q  146 taaagtgcacttttccac-cctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||  || ||||| ||  ||||||| |||||||    
T  25056479 taaagtgcacttttccactcctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttg 25056405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 20214199 - 20214272
Alignment:
Q  146 taaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||||| || ||||||| |||||||||||||||| ||   |||  ||||||||||| |||||||    
T  20214199 taaagtgcacttttcccccttaactttcaaaaacttgcaattttagcactctatgtacaaaaactacaattttg 20214272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 28637690 - 28637630
Alignment:
Q  57 gcatcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctat 117  Q
    ||||||||||||||| |||| ||| ||||||||||||||| || | ||||||| |||||||    
T  28637690 gcatcaaggggaagcgacgacatcccaactaggttggcaccccgaggaacccccatcctat 28637630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 209
Target Start/End: Original strand, 5730439 - 5730509
Alignment:
Q  141 taggttaaagtgcacttttccaccc--taactttaaaaaacttgcaatttttgcctcctaaatacaaaaac 209  Q
    |||| |||||||||||||||| |||  ||||||| |||||||||||||||| || |||||| ||| |||||    
T  5730439 taggctaaagtgcacttttcccccccttaactttcaaaaacttgcaattttggcttcctaagtaccaaaac 5730509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 218
Target Start/End: Original strand, 7311611 - 7311666
Alignment:
Q  163 ccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    |||||||||| ||||||||||||| || |||||| || ||||||||||| ||||||    
T  7311611 ccctaactttcaaaaacttgcaatattggcctcccaagtacaaaaactacaatttt 7311666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 33160389 - 33160310
Alignment:
Q  141 taggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||| |||||||||||||||| |||| || ||| |||||||||||||||| ||| ||||| || | |||||| |||||||    
T  33160389 taggctaaagtgcacttttccccccttaattttcaaaaacttgcaattttagccccctaagtatagaaactacaattttg 33160310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 40255775 - 40255696
Alignment:
Q  141 taggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||| |||||||||||||||| | || || ||| ||||||||||||||||  || |||||||||| |||||| |||||||    
T  40255775 taggctaaagtgcacttttcccctcttaatttttaaaaacttgcaattttgaccccctaaatacagaaactacaattttg 40255696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 219
Target Start/End: Complemental strand, 2686479 - 2686425
Alignment:
Q  165 ctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||| ||||||||||||||||   ||| ||| |||||||||||||||||||    
T  2686479 ctaacttttaaaaacttgcaattttgatctcttaagtacaaaaactataattttg 2686425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 5777897 - 5777946
Alignment:
Q  139 tttaggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttt 189  Q
    |||||| ||||||||||||| || |||||||||| ||||||||||||||||    
T  5777897 tttaggctaaagtgcactttccc-ccctaactttcaaaaacttgcaatttt 5777946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 199
Target Start/End: Original strand, 18485141 - 18485195
Alignment:
Q  146 taaagtgcacttttccacc-ctaactttaaaaaacttgcaatttttgcctcctaa 199  Q
    |||||||||||||| | || ||||||||||||||||||||||||| ||| |||||    
T  18485141 taaagtgcactttttcccctctaactttaaaaaacttgcaattttggccccctaa 18485195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 24332912 - 24332990
Alignment:
Q  142 aggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||||||| | |||| || ||| |||||||||||||||| ||| | ||  ||||||||||| |||||||    
T  24332912 aggttaaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttg 24332990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 25524231 - 25524151
Alignment:
Q  141 taggttaaagtgcacttttccaccc--taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||| |||||||||||||||| |||  ||| ||| ||||| ||| |||||| ||| ||||| ||||||||||| |||||||    
T  25524231 taggctaaagtgcacttttcccccccctaatttttaaaaatttgtaattttggccccctaagtacaaaaactacaattttg 25524151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 31792653 - 31792589
Alignment:
Q  36 ctaagtcaggagattggcgaggcatcaaggggaagcaacgatatcgcaactaggttggcacaccaa 101  Q
    ||||| ||||| ||||| ||||||||| |||||||| |||| ||| ||||||||||||||| ||||    
T  31792653 ctaagccaggacattggtgaggcatca-ggggaagcgacgacatcccaactaggttggcaccccaa 31792589  T

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Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 25524158 - 25524122
Alignment:
Q  183 caatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  25524158 caattttggcctcctaagtacaaaaactataattttg 25524122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 33158119 - 33158175
Alignment:
Q  163 ccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||| ||||||||||||||||  |  ||||| ||||||||||| |||||||    
T  33158119 ccctaactttcaaaaacttgcaattttgacaccctaagtacaaaaactacaattttg 33158175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 61557 - 61483
Alignment:
Q  146 taaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||||| |||| || ||| |||||||||||||||| ||| ||||| |||||||||||||||||||    
T  61557 taaagtgcacttttcctcccttaattttcaaaaacttgcaattttagccccctaagtacaaaaactataattttg 61483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 60093 - 60167
Alignment:
Q  146 taaagtgcacttttccacc-ctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||||| || |||||||| ||||||||||||||||  || ||||  || |||||||| |||||||    
T  60093 taaagtgcacttttcctcctctaacttttaaaaacttgcaattttgaccccctatgtataaaaactacaattttg 60167  T

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Target: scaffold0059 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 4827 - 4754
Alignment:
Q  146 taaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||||||| || |||||||||| |||||| ||||||||| ||| |||||||||| |||||| |||||||    
T  4827 taaagtgcactttccctccctaacttttaaaaacatgcaattttggccccctaaatacagaaactacaattttg 4754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 16704602 - 16704521
Alignment:
Q  139 tttaggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||| |||||||||||||||| |||| |||||| ||||||||||||||||  || ||||| ||||||||||| |||||||    
T  16704602 tttaggctaaagtgcacttttcctcccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttg 16704521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 209
Target Start/End: Original strand, 8821869 - 8821940
Alignment:
Q  139 tttaggttaaagtgcacttttccacc-ctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaac 209  Q
    |||||| |||||||||||||||| || |||||||| |||||||||||||||| ||| ||||| ||| |||||    
T  8821869 tttaggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaac 8821940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 219
Target Start/End: Complemental strand, 1829709 - 1829627
Alignment:
Q  138 ttttaggttaaagtgcacttttc-caccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||| |||||||||||||||||  | |||||||||| ||||||||||||||||  || ||||| || |||||||| |||||||    
T  1829709 tttttggttaaagtgcacttttttccccctaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttg 1829627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 7316397 - 7316335
Alignment:
Q  141 taggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaata 202  Q
    |||| |||||||||||||||| |||| |||||| |||||||||||||||| ||| ||||||||    
T  7316397 taggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaaata 7316335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 8659262 - 8659332
Alignment:
Q  140 ttaggttaaagtgcacttttccacc-ctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaac 209  Q
    ||||| |||||||||||||||| || |||||||| |||||||||||||||| ||| ||||| ||| |||||    
T  8659262 ttaggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaac 8659332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 13580141 - 13580222
Alignment:
Q  36 ctaagtcaggagattggcgaggcatcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctat 117  Q
    ||||| |||||||||||  |||||||||||| ||||||||| ||| | | ||||||||||| ||  |||||||| |||||||    
T  13580141 ctaagccaggagattggacaggcatcaagggaaagcaacgacatccccattaggttggcaccccgtagaacccccatcctat 13580222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 27322170 - 27322093
Alignment:
Q  141 taggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    |||| |||||||||||||||| ||||| |||| |||| ||||||||||| ||| ||||| ||| ||||| | ||||||    
T  27322170 taggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 27322093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 34834682 - 34834633
Alignment:
Q  141 taggttaaagtgcacttttcca-ccctaactttaaaaaacttgcaatttt 189  Q
    |||||||||||||||||||||  |||||||||| ||||||||||||||||    
T  34834682 taggttaaagtgcacttttccctccctaactttcaaaaacttgcaatttt 34834633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 3721615 - 3721687
Alignment:
Q  146 taaagtgcacttttccacc-ctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattt 217  Q
    |||||||||||||||| || |||||||| ||||||||||||||||  || ||||| ||| ||||| |||||||    
T  3721615 taaagtgcacttttccccctctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccataattt 3721687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 3722613 - 3722561
Alignment:
Q  138 ttttaggttaaagtgcacttttcca-ccctaactttaaaaaacttgcaatttt 189  Q
    ||||||| ||||||||||||||||  |||||||||| ||||||||||||||||    
T  3722613 ttttaggctaaagtgcacttttccctccctaactttcaaaaacttgcaatttt 3722561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 142
Target Start/End: Original strand, 34673082 - 34673166
Alignment:
Q  58 catcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctataccatcaatctcagagaaaatttta 142  Q
    ||||||||| ||||||||| ||| ||||||||||| |||  |  |||||||| ||||||||||  |||||||| |||| ||||||    
T  34673082 catcaagggaaagcaacgacatcccaactaggttgacacctcgcagaacccccatcctataccgccaatctcatagaatatttta 34673166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 27437826 - 27437905
Alignment:
Q  141 taggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||| |||||||||||||||  |||| |||||||||||| |||||||||| ||| |||| | | |||||||| |||||||    
T  27437826 taggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttg 27437905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 10786000 - 10785938
Alignment:
Q  156 ttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    |||||| |||||||||| ||||| ||||||||||  || ||||| ||||||||||| ||||||    
T  10786000 ttttcccccctaacttttaaaaatttgcaattttaaccccctaagtacaaaaactacaatttt 10785938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 26575151 - 26575078
Alignment:
Q  145 ttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||| || | |||||||| ||||||||||||||||  || | ||| ||||||||||| |||||||    
T  26575151 ttaaagtgcacttt-cctctctaactttcaaaaacttgcaattttaaccccttaagtacaaaaactacaattttg 26575078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 218
Target Start/End: Complemental strand, 6842389 - 6842308
Alignment:
Q  138 ttttaggttaaagtgcacttttccacc-ctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    ||||||| |||||||||||||||| || |||| ||| ||||| |||||||||| ||| ||||  | ||||||||| ||||||    
T  6842389 ttttaggctaaagtgcacttttccccctctaagtttcaaaaagttgcaattttggccccctatgtgcaaaaactacaatttt 6842308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 10784590 - 10784670
Alignment:
Q  141 taggttaaagtgcacttttccaccc--taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||| ||||||||||||||||  ||  ||||||| ||||||||||||||||  || ||||| || |||||||| |||||||    
T  10784590 taggctaaagtgcacttttccctcccttaacttttaaaaacttgcaattttaaccccctaagtataaaaactacaattttg 10784670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 14823679 - 14823599
Alignment:
Q  141 taggttaaagtgcactttt--ccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||| ||||||||||||||  || || ||| |||||||||||||||||||| ||| | ||| |||| |||||| |||||||    
T  14823679 taggctaaagtgcacttttttcccccttaattttaaaaaacttgcaattttagccccttaagtacagaaactacaattttg 14823599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 26574613 - 26574666
Alignment:
Q  137 attttaggttaaagtgcacttttccacc-ctaactttaaaaaacttgcaatttt 189  Q
    |||||||| ||||||||| ||| ||||| |||||||| ||||||||||||||||    
T  26574613 attttaggctaaagtgcaatttcccacctctaactttcaaaaacttgcaatttt 26574666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 189
Target Start/End: Original strand, 7314883 - 7314927
Alignment:
Q  146 taaagtgcacttttccacc-ctaactttaaaaaacttgcaatttt 189  Q
    |||||||||||||||| || |||||||| ||||||||||||||||    
T  7314883 taaagtgcacttttccccctctaactttcaaaaacttgcaatttt 7314927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 189
Target Start/End: Complemental strand, 8660301 - 8660257
Alignment:
Q  146 taaagtgcacttttccac-cctaactttaaaaaacttgcaatttt 189  Q
    |||||||||||||||| | ||||||||| ||||||||||||||||    
T  8660301 taaagtgcacttttcccctcctaactttcaaaaacttgcaatttt 8660257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 16703573 - 16703643
Alignment:
Q  146 taaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    |||||||||||||||| ||||| |||| ||||||||||||||||   | | ||||||||||||||| ||||||    
T  16703573 taaagtgcacttttcc-ccctatctttcaaaaacttgcaattttgatc-cataaatacaaaaactacaatttt 16703643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 17467 - 17547
Alignment:
Q  140 ttaggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||| |||||||||||||| | |||| |||||| |||||||||||||||| ||| ||||| ||||||||||| |||||||    
T  17467 ttaggctaaagtgcactttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttg 17547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 18874 - 18800
Alignment:
Q  146 taaagtgcacttttccac-cctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||| | | ||||||||| ||||| |||||||||| | | ||||  |||||||||||||||||||    
T  18874 taaagtgcactttttccctcctaacttttaaaaatttgcaattttggtcccctaggtacaaaaactataattttg 18800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 137
Target Start/End: Original strand, 38993091 - 38993183
Alignment:
Q  45 gagattggcgaggcatcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctataccatcaatctcagagaaaa 137  Q
    ||||||||  |||||||| ||||||||||||| ||| ||||||||||||||| ||  |||||||| ||||||| ||  |||||||||| ||||    
T  38993091 gagattggacaggcatcagggggaagcaacgacatcccaactaggttggcaccccgcagaacccccatcctatgccgccaatctcagataaaa 38993183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 47369802 - 47369858
Alignment:
Q  163 ccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||| |||||||||||||||| ||||| ||| |||||||||||||||||||    
T  47369802 ccctaactttcaaaaacttgcaattttagcctcataagtacaaaaactataattttg 47369858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 22630556 - 22630477
Alignment:
Q  140 ttaggttaaagtgcacttttccaccc-taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    ||||| ||||||||||||||||  || ||||||| |||||||||||||||| ||| ||||| ||||||||||| ||||||    
T  22630556 ttaggctaaagtgcacttttccctccataactttcaaaaacttgcaattttggccccctaattacaaaaactacaatttt 22630477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 127329 - 127383
Alignment:
Q  135 aaattttaggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttt 189  Q
    |||| ||||| |||||||||||||||| |||||||||| ||||||||||||||||    
T  127329 aaatcttaggctaaagtgcacttttcccccctaactttcaaaaacttgcaatttt 127383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 18371427 - 18371501
Alignment:
Q  146 taaagtgcacttttccac-cctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||||| | ||||||||| |||||||||||||||| ||| | ||| ||||||||||| |||||||    
T  18371427 taaagtgcacttttcccctcctaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttg 18371501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 42886389 - 42886311
Alignment:
Q  141 taggttaaagtgcacttttccac-cctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    ||||||||||||||||||||  | ||||||||| ||||| ||||||||||  || ||||||||||||||||| ||||||    
T  42886389 taggttaaagtgcacttttctcctcctaactttcaaaaatttgcaattttgaccccctaaatacaaaaactacaatttt 42886311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 209
Target Start/End: Complemental strand, 17782663 - 17782587
Alignment:
Q  134 aaaattttaggttaaagtgcacttttccacc-ctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaac 209  Q
    |||||| |||| |||||||||||||||| || |||||||| |||||||||||||||| ||| ||||| ||| |||||    
T  17782663 aaaattataggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaac 17782587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 11662658 - 11662575
Alignment:
Q  137 attttaggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||| ||||||||||||| |||||| |||| |||||| |||||||||||||||| ||   |||  |||||||||||||||||||    
T  11662658 atttaaggttaaagtgcatttttccccccttaactttcaaaaacttgcaattttagctctctatgtacaaaaactataattttg 11662575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 219
Target Start/End: Complemental strand, 14999249 - 14999179
Alignment:
Q  148 aagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||||||||| |||||| ||| |||| |||||||||||  || ||||||||||||||||| |||||||    
T  14999249 aagtgcacttttcccccctaattttcaaaa-cttgcaattttgaccccctaaatacaaaaactacaattttg 14999179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 18372544 - 18372481
Alignment:
Q  156 ttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||| |||||| ||| |||||||||||||||| ||| ||||| ||||||||||| |||||||    
T  18372544 ttttcccccctaattttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttg 18372481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 3227698 - 3227628
Alignment:
Q  140 ttaggttaaagtgcacttttccaccc-taactttaaaaaacttgcaatttttgcctcctaaatacaaaaac 209  Q
    ||||| |||||||||||||||| ||| ||||||| |||||||||||||||| ||| ||||| ||| |||||    
T  3227698 ttaggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttggccccctaagtaccaaaac 3227628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 20382426 - 20382332
Alignment:
Q  36 ctaagtcaggagattggcgaggcatcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctataccatcaatctca 130  Q
    ||||| ||||||||||   |||||||| ||||||||||| | ||| ||||||||||||||| ||  |||||||| ||||||| ||  ||||||||    
T  20382426 ctaagccaggagattgaataggcatcagggggaagcaacaacatcccaactaggttggcaccccgcagaacccccatcctatgccgccaatctca 20382332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 21505414 - 21505491
Alignment:
Q  141 taggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||| |||||||||||||||| |||||||||| ||||| |||| ||||| ||| || | |||||||||||| |||||||    
T  21505414 taggctaaagtgcacttttcc-ccctaactttcaaaaagttgcgattttggcccccgatatacaaaaactacaattttg 21505491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 209
Target Start/End: Complemental strand, 31949905 - 31949836
Alignment:
Q  141 taggttaaagtgcacttttccaccc-taactttaaaaaacttgcaatttttgcctcctaaatacaaaaac 209  Q
    |||| ||||||||||| |||| ||| ||||||| |||||||||||||||| ||| ||||||||| |||||    
T  31949905 taggctaaagtgcactcttccccccctaactttcaaaaacttgcaattttggccccctaaataccaaaac 31949836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 34174086 - 34174017
Alignment:
Q  140 ttaggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaac 209  Q
    ||||| |||||||||||||||| ||||| |||| |||| ||||||||||| ||| ||||| ||| |||||    
T  34174086 ttaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaac 34174017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 7501956 - 7501896
Alignment:
Q  140 ttaggttaaagtgcacttttccacc-ctaactttaaaaaacttgcaatttttgcctcctaa 199  Q
    ||||| |||||||||||||||| || |||||||| |||||||||||||||| ||| |||||    
T  7501956 ttaggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaa 7501896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 31659625 - 31659700
Alignment:
Q  146 taaagtgcactttt--ccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||||||||  || |||||||||| |||||||| |||||||  || ||||| ||||||||||| |||||||    
T  31659625 taaagtgcacttttaccccccctaactttcaaaaacttacaattttgaccccctaagtacaaaaactacaattttg 31659700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 37375081 - 37375021
Alignment:
Q  57 gcatcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctat 117  Q
    ||||||||||||||| |||| ||| ||||||||||||||| || | ||||||| |||||||    
T  37375081 gcatcaaggggaagcgacgacatcccaactaggttggcaccccgaggaacccccatcctat 37375021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 3227111 - 3227174
Alignment:
Q  146 taaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaac 209  Q
    ||||||||||||| || |||||| ||| |||||||||||||||| ||| ||||| ||| |||||    
T  3227111 taaagtgcactttccccccctaattttcaaaaacttgcaattttggccccctaagtaccaaaac 3227174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 189
Target Start/End: Original strand, 7500458 - 7500501
Alignment:
Q  146 taaagtgcacttttccaccctaactttaaaaaacttgcaatttt 189  Q
    |||||||||||||||| || ||||||| ||||||||||||||||    
T  7500458 taaagtgcacttttcccccttaactttcaaaaacttgcaatttt 7500501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 11658377 - 11658456
Alignment:
Q  141 taggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||| |||| ||||||||||| |||| |||||| |||||| ||||||||| ||| ||||  ||||||||||| |||||||    
T  11658377 taggctaaattgcacttttccccccttaactttcaaaaacatgcaattttagccccctatgtacaaaaactacaattttg 11658456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 209
Target Start/End: Original strand, 31949318 - 31949389
Alignment:
Q  139 tttaggttaaagtgcacttttcca-ccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaac 209  Q
    |||||| ||||||||||||||||  |||||| ||| |||||||||||||||| ||| ||||| ||| |||||    
T  31949318 tttaggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaac 31949389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 769416 - 769490
Alignment:
Q  146 taaagtgcacttttccaccc-taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||| |||||||||  ||| ||| ||||||||||||||||  | |||||| |||||||| ||||||||||    
T  769416 taaagtgcaattttccacctgtaattttcaaaaacttgcaattttgacatcctaagtacaaaaattataattttg 769490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 211
Target Start/End: Complemental strand, 20163654 - 20163588
Alignment:
Q  146 taaagtgcacttttccaccc-taactttaaaaaacttgcaatttttgcctcctaaatacaaaaacta 211  Q
    |||||||||||| ||||||| ||||||| |||||||||||||||| ||  ||||  |||||||||||    
T  20163654 taaagtgcacttctccacccctaactttcaaaaacttgcaattttggctccctatgtacaaaaacta 20163588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 199
Target Start/End: Complemental strand, 47525465 - 47525411
Alignment:
Q  146 taaagtgcacttttccacc-ctaactttaaaaaacttgcaatttttgcctcctaa 199  Q
    |||||||||||||||| || |||||||| |||||||||||||||| ||| |||||    
T  47525465 taaagtgcacttttccccctctaactttcaaaaacttgcaattttagccccctaa 47525411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 48935001 - 48934927
Alignment:
Q  146 taaagtgcacttttccaccc-taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||| |||||||||| ||||||| ||||||||| ||||||  ||  |||| ||||||||||| |||||||    
T  48935001 taaagtgcatttttccacccctaactttcaaaaacttgtaattttgaccctctaagtacaaaaactaaaattttg 48934927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 22629518 - 22629563
Alignment:
Q  174 aaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||| |||||| ||||||||| ||||||||||| |||||||    
T  22629518 aaaaacttgtaattttggcctcctaagtacaaaaactacaattttg 22629563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 46483611 - 46483562
Alignment:
Q  140 ttaggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttt 189  Q
    |||||||||||||||||||||| |  ||||||| ||||||||| ||||||    
T  46483611 ttaggttaaagtgcacttttcccctttaacttttaaaaacttgtaatttt 46483562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 128703 - 128655
Alignment:
Q  142 aggttaaagtgcactttt-ccaccctaactttaaaaaacttgcaatttt 189  Q
    |||||||||||||||||| ||||| ||||||| ||||| ||||||||||    
T  128703 aggttaaagtgcacttttcccaccataactttcaaaaatttgcaatttt 128655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 189
Target Start/End: Original strand, 17781664 - 17781708
Alignment:
Q  146 taaagtgcacttttccaccc-taactttaaaaaacttgcaatttt 189  Q
    |||||||||||||||| ||| ||||||| ||||||||||||||||    
T  17781664 taaagtgcacttttccccccctaactttcaaaaacttgcaatttt 17781708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 209
Target Start/End: Original strand, 47524532 - 47524592
Alignment:
Q  150 gtgcacttttccacc-ctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaac 209  Q
    |||||||||||| || |||||||| |||||||||||||||| ||| ||||| ||| |||||    
T  47524532 gtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaac 47524592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 3414 - 3332
Alignment:
Q  137 attttaggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||||| |||||||||||||||| |||| ||||| |||||||| |||||||  || | ||  |||||||||||||||||||    
T  3414 attttaggctaaagtgcacttttccccccttactttcaaaaacttacaattttgaccccataggtacaaaaactataattttg 3332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 142
Target Start/End: Original strand, 41228 - 41326
Alignment:
Q  44 ggagattggcgaggcatcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctataccatcaatctcagagaaaatttta 142  Q
    |||||||||  | |||||||||||||||||||| ||| ||||||||||||||| ||  |||||||  ||||||| ||  ||| |||||| |||||||||    
T  41228 ggagattggacatgcatcaaggggaagcaacgaaatcccaactaggttggcaccccgcagaaccctcatcctatgccgccaaactcagataaaatttta 41326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 49182 - 49109
Alignment:
Q  146 taaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataatttt 218  Q
    |||| |||||||||||||||| |||||| |||||||||||||||| ||||||||| ||  ||||||| ||||||    
T  49182 taaattgcacttttccacccttaacttttaaaaacttgcaattttggcctcctaagtattaaaactacaatttt 49109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 3377 - 3478
Alignment:
Q  36 ctaagtcaggagattggcgaggcatcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctataccatcaatctcagagaa 135  Q
    ||||| || ||||||||  |||||||| ||||||||||| | ||| ||||||||||||||| ||  |||||||| ||||||| ||  |||||||||| ||    
T  3377 ctaagccaagagattggacaggcatcagggggaagcaacaacatcccaactaggttggcactccgcagaacccccatcctatgccgccaatctcagataa 3476  T
Q  136 aa 137  Q
    ||    
T  3477 aa 3478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 1437 - 1516
Alignment:
Q  141 taggttaaagtgcacttttccacc-ctaactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||| ||||||| |||||||| || |||||||||||||||||||||||||  || ||||  || ||||||||||||||||    
T  1437 taggctaaagtgtacttttccccctctaactttaaaaaacttgcaattttgaccccctatgtataaaaactataattttg 1516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 23073 - 23126
Alignment:
Q  135 aaattttaggttaaagtgcacttttccaccctaactttaaaaaacttgcaatttt 189  Q
    ||||||| || |||||||||||||||| |||||||||| ||||||||||||||||    
T  23073 aaatttttggctaaagtgcacttttcc-ccctaactttcaaaaacttgcaatttt 23126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 24000 - 23931
Alignment:
Q  134 aaaattttaggttaaagtgcacttttc-caccctaactttaaaaaacttgcaatttttgcctcctaaata 202  Q
    |||| |||||| ||||||||||||||  | |||||||||| |||||||||||||||| ||  ||||||||    
T  24000 aaaaatttaggctaaagtgcacttttttctccctaactttcaaaaacttgcaattttggctccctaaata 23931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 5542 - 5462
Alignment:
Q  140 ttaggttaaagtgcacttttccaccc-taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||| |||||||||||||||| ||| ||| ||| ||||||||||||||||  || | ||| ||||||||||| |||||||    
T  5542 ttaggctaaagtgcacttttccccccctaattttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttg 5462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 2562 - 2499
Alignment:
Q  146 taaagtgcacttttccaccctaacttt-aaaaaacttgcaatttttgcctcctaaatacaaaaac 209  Q
    |||||||||||||||| |||||||||| |||||||||||||||||  || ||||| |||||||||    
T  2562 taaagtgcacttttcc-ccctaactttcaaaaaacttgcaattttgaccccctaagtacaaaaac 2499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 7185 - 7122
Alignment:
Q  146 taaagtgcacttttccaccctaacttt-aaaaaacttgcaatttttgcctcctaaatacaaaaac 209  Q
    |||||||||||||||| |||||||||| |||||||||||||||||  || ||||| |||||||||    
T  7185 taaagtgcacttttcc-ccctaactttcaaaaaacttgcaattttgaccccctaagtacaaaaac 7122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 49536 - 49457
Alignment:
Q  141 taggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||| |||||||||||||||  |||| |||||||||||| |||||||||| ||| |||| | | |||||||| |||||||    
T  49536 taggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttg 49457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 236 - 310
Alignment:
Q  146 taaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||||||| || |||| |||||| ||||| |||||||||| | | ||||  |||||||||||||||||||    
T  236 taaagtgcactttcccccccttaactttcaaaaagttgcaattttggtcccctatgtacaaaaactataattttg 310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 219
Target Start/End: Original strand, 6339 - 6420
Alignment:
Q  139 tttaggttaaagtgcacttttccaccc-taactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    ||||||||||||||||||||||| ||| ||| ||| ||||| || | ||||| ||| ||||  ||||||||||| |||||||    
T  6339 tttaggttaaagtgcacttttccgcccttaagtttcaaaaagttacgattttagccccctatgtacaaaaactacaattttg 6420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 219
Target Start/End: Original strand, 19484 - 19565
Alignment:
Q  139 tttaggttaaagtgcacttttccaccct-aactttaaaaaacttgcaatttttgcctcctaaatacaaaaactataattttg 219  Q
    |||||| ||||||||| |||||| |||| || ||| |||| ||||||||||| ||| ||||| || |||||||| |||||||    
T  19484 tttaggctaaagtgcatttttccccccttaattttcaaaaccttgcaattttggccccctaagtataaaaactacaattttg 19565  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 92
Target Start/End: Original strand, 145981 - 146018
Alignment:
Q  55 aggcatcaaggggaagcaacgatatcgcaactaggttg 92  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  145981 aggcatcaaggggaagcaacgacatcccaactaggttg 146018  T

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Target: scaffold0024; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 160399 - 160298
Alignment:
Q  36 ctaagtcaggagattggcgaggcatcaaggggaagcaacgatatcgcaactaggttggcacaccaaagaacccctatcctataccatcaatctcagagaa 135  Q
    ||||| |||||||||||    |||||| ||||||||||||| ||| ||||||||||| ||| ||  |||||||| || |||| ||  |||||||||| ||    
T  160399 ctaagccaggagattggacctgcatcagggggaagcaacgacatcccaactaggttgccaccccgcagaacccccattctatgccgccaatctcagataa 160300  T
Q  136 aa 137  Q
    ||    
T  160299 aa 160298  T

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