View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15229_high_1_N (Length: 588)

Name: NF15229_high_1_N
Description: NF15229
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15229_high_1_N
NF15229_high_1_N
[»] chr2 (40 HSPs)
chr2 (237-509)||(11938716-11938989)
chr2 (14-149)||(11938492-11938627)
chr2 (280-415)||(36450891-36451027)
chr2 (246-411)||(36449776-36449943)
chr2 (246-411)||(7898689-7898856)
chr2 (282-406)||(13570529-13570655)
chr2 (267-415)||(18299367-18299517)
chr2 (248-412)||(18904364-18904530)
chr2 (294-412)||(23869519-23869638)
chr2 (281-411)||(38840464-38840596)
chr2 (323-417)||(18868916-18869011)
chr2 (281-414)||(38839237-38839372)
chr2 (280-406)||(22848194-22848322)
chr2 (281-387)||(11258782-11258889)
chr2 (15-74)||(18905188-18905247)
chr2 (270-406)||(28617926-28618062)
chr2 (281-414)||(7899853-7899988)
chr2 (280-406)||(13030295-13030420)
chr2 (280-414)||(18905958-18906093)
chr2 (333-414)||(16446149-16446231)
chr2 (246-406)||(18300660-18300820)
chr2 (246-389)||(24475245-24475390)
chr2 (285-417)||(22587929-22588062)
chr2 (422-516)||(27206367-27206461)
chr2 (270-397)||(41879173-41879300)
chr2 (335-406)||(1033214-1033284)
chr2 (280-411)||(18797244-18797378)
chr2 (281-406)||(41878095-41878224)
chr2 (333-387)||(13567995-13568049)
chr2 (247-387)||(11257645-11257786)
chr2 (410-508)||(20374110-20374208)
chr2 (281-417)||(26545492-26545630)
chr2 (333-406)||(802615-802688)
chr2 (256-372)||(27553711-27553827)
chr2 (328-389)||(32739644-32739705)
chr2 (422-494)||(3914252-3914324)
chr2 (270-389)||(22587522-22587640)
chr2 (99-130)||(18905139-18905170)
chr2 (327-385)||(24476862-24476920)
chr2 (353-406)||(21837299-21837351)
[»] chr5 (41 HSPs)
chr5 (281-410)||(28539791-28539921)
chr5 (281-414)||(28538671-28538806)
chr5 (281-406)||(36485303-36485430)
chr5 (281-418)||(36486459-36486598)
chr5 (280-406)||(19752915-19753042)
chr5 (282-413)||(25523065-25523198)
chr5 (256-406)||(22940568-22940720)
chr5 (280-411)||(19754100-19754234)
chr5 (246-411)||(16650790-16650958)
chr5 (273-406)||(1796057-1796192)
chr5 (246-410)||(24332912-24333078)
chr5 (273-413)||(20216726-20216868)
chr5 (280-369)||(25524068-25524158)
chr5 (280-411)||(18486872-18487005)
chr5 (246-407)||(42195136-42195298)
chr5 (308-415)||(1016862-1016970)
chr5 (267-417)||(5778793-5778945)
chr5 (318-389)||(7311611-7311683)
chr5 (281-411)||(40255643-40255775)
chr5 (284-386)||(18154518-18154619)
chr5 (280-406)||(18485141-18485276)
chr5 (273-406)||(20214199-20214333)
chr5 (318-406)||(25056389-25056479)
chr5 (294-413)||(5777897-5778016)
chr5 (327-406)||(33158101-33158181)
chr5 (333-387)||(2686425-2686479)
chr5 (422-516)||(22602016-22602110)
chr5 (281-389)||(1015505-1015614)
chr5 (329-411)||(5730439-5730523)
chr5 (334-406)||(2186774-2186846)
chr5 (247-357)||(16650045-16650157)
chr5 (246-411)||(25055410-25055578)
chr5 (435-495)||(28637630-28637690)
chr5 (281-411)||(33160258-33160389)
chr5 (281-378)||(1797268-1797366)
chr5 (289-406)||(21835044-21835162)
chr5 (333-411)||(25524151-25524231)
chr5 (451-516)||(31792589-31792653)
chr5 (336-389)||(34893686-34893739)
chr5 (306-409)||(38834087-38834191)
chr5 (250-290)||(2188889-2188929)
[»] chr8 (40 HSPs)
chr8 (281-417)||(24122875-24123012)
chr8 (281-406)||(11287779-11287906)
chr8 (281-406)||(12353332-12353457)
chr8 (280-405)||(45112875-45113000)
chr8 (270-411)||(5513980-5514122)
chr8 (267-411)||(11282006-11282152)
chr8 (281-414)||(18978015-18978149)
chr8 (281-406)||(18979091-18979218)
chr8 (280-404)||(1824048-1824174)
chr8 (280-404)||(1858493-1858619)
chr8 (281-414)||(18970906-18971040)
chr8 (268-408)||(29968296-29968436)
chr8 (256-406)||(30335642-30335795)
chr8 (280-406)||(10006347-10006475)
chr8 (280-406)||(22221334-22221462)
chr8 (280-406)||(22227676-22227804)
chr8 (280-411)||(10007733-10007866)
chr8 (411-516)||(17275573-17275677)
chr8 (281-415)||(12351915-12352051)
chr8 (333-412)||(5514294-5514373)
chr8 (281-395)||(8388477-8388592)
chr8 (246-406)||(22220391-22220554)
chr8 (281-386)||(24123869-24123975)
chr8 (256-406)||(30336446-30336599)
chr8 (415-516)||(43848087-43848188)
chr8 (256-406)||(11283155-11283307)
chr8 (318-389)||(24488688-24488759)
chr8 (410-509)||(17279122-17279220)
chr8 (281-406)||(43661268-43661395)
chr8 (270-410)||(40471107-40471248)
chr8 (457-510)||(13329515-13329568)
chr8 (456-497)||(28975015-28975056)
chr8 (415-508)||(29043163-29043256)
chr8 (271-414)||(30568882-30569025)
chr8 (237-397)||(1823565-1823728)
chr8 (237-397)||(1858010-1858173)
chr8 (333-395)||(32207349-32207411)
chr8 (456-497)||(43856151-43856192)
chr8 (271-350)||(34625161-34625241)
chr8 (435-515)||(40263642-40263722)
[»] chr1 (46 HSPs)
chr1 (281-419)||(45149941-45150081)
chr1 (280-411)||(50680330-50680462)
chr1 (247-414)||(24422795-24422965)
chr1 (410-516)||(33064805-33064911)
chr1 (280-411)||(43058784-43058916)
chr1 (281-410)||(24426046-24426177)
chr1 (281-406)||(39699738-39699864)
chr1 (247-406)||(52274971-52275133)
chr1 (280-406)||(36613874-36614002)
chr1 (256-414)||(11437144-11437305)
chr1 (267-415)||(41364823-41364972)
chr1 (247-411)||(14999283-14999445)
chr1 (333-412)||(23980490-23980570)
chr1 (246-413)||(35595127-35595298)
chr1 (246-410)||(39153052-39153218)
chr1 (247-411)||(52276099-52276266)
chr1 (281-406)||(39698566-39698692)
chr1 (281-397)||(14999926-15000043)
chr1 (270-406)||(45157170-45157306)
chr1 (267-406)||(51684369-51684510)
chr1 (280-406)||(35594220-35594346)
chr1 (280-410)||(37526848-37526979)
chr1 (415-516)||(41917070-41917172)
chr1 (270-413)||(39151927-39152071)
chr1 (284-415)||(51685739-51685872)
chr1 (267-414)||(52828027-52828176)
chr1 (284-406)||(36612856-36612979)
chr1 (308-386)||(7675457-7675536)
chr1 (281-411)||(7983048-7983179)
chr1 (281-375)||(44411937-44412032)
chr1 (281-406)||(45148584-45148710)
chr1 (333-411)||(7674526-7674603)
chr1 (256-406)||(11436045-11436198)
chr1 (410-515)||(21487822-21487927)
chr1 (280-415)||(43059976-43060113)
chr1 (445-516)||(19274265-19274336)
chr1 (279-411)||(35066971-35067105)
chr1 (281-410)||(43378684-43378814)
chr1 (328-386)||(44404466-44404524)
chr1 (254-314)||(2940362-2940422)
chr1 (410-494)||(17122816-17122900)
chr1 (281-372)||(46525772-46525862)
chr1 (281-406)||(52827350-52827477)
chr1 (302-387)||(33088609-33088695)
chr1 (341-386)||(39222505-39222550)
chr1 (294-406)||(41366115-41366228)
[»] chr3 (48 HSPs)
chr3 (281-411)||(7268798-7268929)
chr3 (280-406)||(54539758-54539886)
chr3 (281-406)||(54540761-54540888)
chr3 (281-414)||(7267639-7267773)
chr3 (247-406)||(8456481-8456642)
chr3 (273-416)||(29931219-29931364)
chr3 (273-416)||(29980373-29980518)
chr3 (282-406)||(55191967-55192092)
chr3 (256-413)||(7758398-7758558)
chr3 (280-415)||(12700169-12700304)
chr3 (271-414)||(5029644-5029788)
chr3 (281-411)||(22776783-22776915)
chr3 (273-377)||(55191544-55191647)
chr3 (281-406)||(29932670-29932796)
chr3 (281-406)||(29981824-29981950)
chr3 (309-405)||(24516464-24516562)
chr3 (267-411)||(47610537-47610683)
chr3 (270-411)||(19984847-19984989)
chr3 (279-417)||(53614811-53614950)
chr3 (282-415)||(34019117-34019250)
chr3 (267-412)||(51470412-51470558)
chr3 (281-417)||(54986978-54987114)
chr3 (318-412)||(534496-534592)
chr3 (256-406)||(46719944-46720096)
chr3 (410-509)||(7164995-7165094)
chr3 (422-497)||(19185075-19185150)
chr3 (246-420)||(51038725-51038902)
chr3 (267-406)||(51469975-51470116)
chr3 (280-406)||(47614188-47614316)
chr3 (281-419)||(49216237-49216377)
chr3 (341-412)||(11671373-11671444)
chr3 (281-386)||(4271464-4271570)
chr3 (328-406)||(12703519-12703597)
chr3 (281-406)||(51037539-51037665)
chr3 (281-386)||(6249633-6249738)
chr3 (410-495)||(10287681-10287766)
chr3 (415-516)||(20952380-20952481)
chr3 (267-406)||(46721177-46721318)
chr3 (353-413)||(47615592-47615653)
chr3 (281-389)||(52840575-52840684)
chr3 (281-415)||(47609691-47609827)
chr3 (281-372)||(10584012-10584102)
chr3 (318-406)||(535790-535880)
chr3 (333-410)||(52104480-52104554)
chr3 (281-349)||(23769918-23769986)
chr3 (281-415)||(23770378-23770514)
chr3 (460-496)||(27636905-27636941)
chr3 (460-496)||(27639974-27640010)
[»] chr4 (50 HSPs)
chr4 (281-416)||(37728536-37728672)
chr4 (281-415)||(19750546-19750681)
chr4 (281-415)||(19789125-19789260)
chr4 (281-397)||(31599802-31599919)
chr4 (267-411)||(49307985-49308129)
chr4 (281-418)||(1963187-1963326)
chr4 (281-406)||(31600956-31601083)
chr4 (282-410)||(8758809-8758939)
chr4 (284-412)||(26421597-26421725)
chr4 (256-412)||(1290143-1290302)
chr4 (280-411)||(1835072-1835205)
chr4 (246-414)||(49306770-49306939)
chr4 (281-411)||(52491578-52491710)
chr4 (246-406)||(1834122-1834286)
chr4 (267-411)||(5526083-5526228)
chr4 (256-419)||(13509304-13509469)
chr4 (267-406)||(5525363-5525503)
chr4 (281-412)||(8757672-8757804)
chr4 (280-411)||(17382991-17383123)
chr4 (280-411)||(17388181-17388313)
chr4 (308-410)||(21539069-21539173)
chr4 (246-412)||(33296221-33296389)
chr4 (267-412)||(25685779-25685926)
chr4 (267-406)||(10471345-10471486)
chr4 (270-406)||(35934347-35934482)
chr4 (410-509)||(13242175-13242274)
chr4 (279-414)||(55603501-55603636)
chr4 (318-414)||(8155733-8155830)
chr4 (327-407)||(12129625-12129706)
chr4 (267-406)||(25684937-25685078)
chr4 (281-407)||(35935504-35935632)
chr4 (294-412)||(48780245-48780365)
chr4 (246-406)||(1964376-1964539)
chr4 (271-406)||(14868893-14869028)
chr4 (271-406)||(14876906-14877041)
chr4 (280-414)||(21177992-21178127)
chr4 (333-388)||(33310113-33310168)
chr4 (267-406)||(10470549-10470690)
chr4 (267-411)||(13386012-13386160)
chr4 (415-516)||(38499835-38499936)
chr4 (325-388)||(54110643-54110707)
chr4 (435-494)||(20383961-20384020)
chr4 (267-401)||(46638682-46638817)
chr4 (246-389)||(10448196-10448340)
chr4 (461-494)||(12714267-12714300)
chr4 (334-411)||(50909271-50909348)
chr4 (281-406)||(50909643-50909771)
chr4 (334-407)||(55602378-55602451)
chr4 (247-326)||(2412855-2412935)
chr4 (295-339)||(33997839-33997883)
[»] scaffold0302 (2 HSPs)
scaffold0302 (281-412)||(17467-17600)
scaffold0302 (281-406)||(18747-18874)
[»] scaffold0632 (1 HSPs)
scaffold0632 (284-415)||(3282-3414)
[»] chr7 (36 HSPs)
chr7 (280-406)||(18371427-18371555)
chr7 (247-389)||(31659644-31659788)
chr7 (280-396)||(18372427-18372544)
chr7 (281-411)||(42886257-42886389)
chr7 (282-415)||(11662523-11662658)
chr7 (280-378)||(22629518-22629617)
chr7 (267-417)||(127329-127479)
chr7 (246-404)||(14999091-14999249)
chr7 (267-412)||(3227551-3227698)
chr7 (267-389)||(31949759-31949882)
chr7 (244-386)||(43899470-43899613)
chr7 (280-412)||(22630422-22630556)
chr7 (270-412)||(7501812-7501956)
chr7 (267-413)||(31949318-31949466)
chr7 (14-62)||(43899787-43899835)
chr7 (280-406)||(7500458-7500585)
chr7 (327-389)||(47369802-47369864)
chr7 (283-411)||(21505414-21505542)
chr7 (267-406)||(3227111-3227251)
chr7 (415-507)||(38993091-38993183)
chr7 (237-406)||(46482600-46482772)
chr7 (328-418)||(17782572-17782663)
chr7 (333-406)||(48934927-48935001)
chr7 (267-410)||(128558-128703)
chr7 (273-411)||(11658377-11658517)
chr7 (281-406)||(769416-769543)
chr7 (422-516)||(20382332-20382426)
chr7 (343-412)||(34174017-34174086)
chr7 (267-406)||(47525324-47525465)
chr7 (435-495)||(37375021-37375081)
chr7 (281-406)||(17781664-17781791)
chr7 (341-406)||(20163588-20163654)
chr7 (284-410)||(43900463-43900589)
chr7 (269-309)||(8521105-8521145)
chr7 (99-135)||(43899724-43899760)
chr7 (343-387)||(47524548-47524592)
[»] scaffold0019 (2 HSPs)
scaffold0019 (246-406)||(61394-61557)
scaffold0019 (246-406)||(60093-60256)
[»] scaffold1303 (1 HSPs)
scaffold1303 (267-411)||(1437-1583)
[»] scaffold0003 (1 HSPs)
scaffold0003 (248-411)||(49370-49536)
[»] chr6 (26 HSPs)
chr6 (250-395)||(6840207-6840353)
chr6 (248-411)||(27437826-27437992)
chr6 (281-414)||(1829574-1829709)
chr6 (281-387)||(26575025-26575132)
chr6 (282-413)||(16704469-16704602)
chr6 (270-397)||(10785874-10786001)
chr6 (281-415)||(26574613-26574748)
chr6 (294-413)||(8821869-8821990)
chr6 (271-411)||(27322029-27322170)
chr6 (267-412)||(8659262-8659409)
chr6 (280-411)||(7316264-7316397)
chr6 (267-406)||(8660161-8660301)
chr6 (280-406)||(7314883-7315010)
chr6 (281-386)||(10784617-10784724)
chr6 (281-411)||(14823546-14823679)
chr6 (267-411)||(34834536-34834682)
chr6 (267-406)||(3721615-3721756)
chr6 (435-516)||(13580141-13580222)
chr6 (271-411)||(27318313-27318456)
chr6 (284-410)||(29473076-29473204)
chr6 (410-494)||(34673082-34673166)
chr6 (281-414)||(14822355-14822490)
chr6 (329-414)||(3722527-3722613)
chr6 (325-406)||(16703573-16703653)
chr6 (281-339)||(22418867-22418924)
chr6 (334-414)||(6842308-6842389)
[»] scaffold2034 (2 HSPs)
scaffold2034 (281-406)||(236-363)
scaffold2034 (281-386)||(949-1055)
[»] scaffold0320 (1 HSPs)
scaffold0320 (280-413)||(19484-19619)
[»] scaffold0093 (2 HSPs)
scaffold0093 (273-406)||(2428-2562)
scaffold0093 (273-406)||(7051-7185)
[»] scaffold0294 (1 HSPs)
scaffold0294 (281-412)||(5409-5542)
[»] scaffold0059 (2 HSPs)
scaffold0059 (333-406)||(4754-4827)
scaffold0059 (280-389)||(3696-3806)
[»] scaffold0111 (1 HSPs)
scaffold0111 (410-508)||(41228-41326)
[»] scaffold0045 (1 HSPs)
scaffold0045 (334-406)||(49109-49182)
[»] scaffold0041 (1 HSPs)
scaffold0041 (415-516)||(3377-3478)
[»] scaffold0186 (2 HSPs)
scaffold0186 (280-417)||(23073-23210)
scaffold0186 (350-418)||(23931-24000)
[»] scaffold0112 (1 HSPs)
scaffold0112 (281-406)||(37151-37277)
[»] scaffold0586 (1 HSPs)
scaffold0586 (318-413)||(6339-6436)
[»] scaffold0049 (1 HSPs)
scaffold0049 (271-332)||(7880-7941)
[»] scaffold0024 (2 HSPs)
scaffold0024 (460-497)||(145981-146018)
scaffold0024 (415-516)||(160298-160399)


Alignment Details
Target: chr2 (Bit Score: 171; Significance: 2e-91; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 237 - 509
Target Start/End: Original strand, 11938716 - 11938989
Alignment:
Q  237 aattagtttattacacgcatggcatgccactcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caa 335  Q
    |||||||||||||||||| | ||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||| || ||||||||||||||| |||    
T  11938716 aattagtttattacacgcgtcgcatgccactcagtattgactgagtcaaaattggcaaaaatgatcaaaattgcaaaagagctaattcttaggggggcaa 11938815  T
Q  336 aattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttaggg-tggaaaaatgcactttaacctaaaattttctctgagattgatggt 434  Q
    ||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||| ||||||||| ||||||||||||||||||||||| ||     
T  11938816 aattata-tttttgtacttaggagaccaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcctaaaattttctctgagattgacgga 11938914  T
Q  435 ataggataggggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatgcctcgccaatctcct 509  Q
     ||||||||||||||| |  |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  11938915 ctaggataggggttctctaatgtgccaacctagttgcgatatcgtttcttccccttgatgcctcaccaatctcct 11938989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 11938492 - 11938627
Alignment:
Q  14 gaagaaaagagaaaaagaggagataaggatgatcttgtttctacttcaacaaaaggatgatagtgatgatgcagnnnnnnnnnnntcaattgaaattttt 113  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||           ||||||| |||||||    
T  11938492 gaagaagagagaaaaagaggagataaggatgatcttgtttctacttcaacaaaaggatgatggtgatgatgcagaaaaaataaaatcaattgtaattttt 11938591  T
Q  114 gtgctttgttgttatgtgatgttgaatctaatgaag 149  Q
    ||| ||||||||||||||||||||||||||||||||    
T  11938592 gtgttttgttgttatgtgatgttgaatctaatgaag 11938627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 280 - 415
Target Start/End: Original strand, 36450891 - 36451027
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggca-aaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||| | ||||||||||||||||||||||| ||||||||| ||||||  ||||| |||||| |||| ||||| | ||||||||||||||||||    
T  36450891 agtcaaaattggccaaaaggatcaaaattgcaaaggagctaattcttggggggccgaaattgtagtttctgtacttaggggaccaaaattgcaagttttt 36450990  T
Q  379 taaagttagggtggaaaaatgcactttaacctaaaat 415  Q
     ||||||| || |||||| ||||||||||||||||||    
T  36450991 gaaagttaagggggaaaagtgcactttaacctaaaat 36451027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 246 - 411
Target Start/End: Complemental strand, 36449943 - 36449776
Alignment:
Q  246 attacacgcatggcatgccactcag-cattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatag 343  Q
    ||||||| |||||||||||||  || ||||||| | ||||||||||   ||||||||||||||||||||||  ||||||||| ||||| ||||||| |||    
T  36449943 attacacacatggcatgccacgtaggcattgaccg-gtcaaaattggtcaaaaggatcaaaattgcaaagggcctaattcttgggggggcaaaattgtag 36449845  T
Q  344 tttttgtatttaggaggccaaaattgcaagttttttaaagtt-agggtggaaaaatgcactttaaccta 411  Q
    |||||||| ||||| |||||||||||||||||||| |||||| |||| |||||| ||||||||| ||||    
T  36449844 tttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagccta 36449776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 246 - 411
Target Start/End: Complemental strand, 7898856 - 7898689
Alignment:
Q  246 attacacgcatggcatgccac-tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatag 343  Q
    ||||||| | ||||||||||| | ||||||||||| |||||||||||  |||||||| |||||||||| ||  |||| ||||||||||| |||||| |||    
T  7898856 attacacacgtggcatgccacgtaagcattgactg-gtcaaaattgatcaaaaggattaaaattgcaatggggctaaatcttagggggccaaaattgtag 7898758  T
Q  344 tttttgtatttaggaggccaaaattgcaagttttttaaagtt-agggtggaaaaatgcactttaaccta 411  Q
    ||| | || ||||||||| |||||||||||||||| |||||| ||||  ||||| ||||||||||||||    
T  7898757 tttctatacttaggaggcaaaaattgcaagtttttgaaagttaaggggagaaaagtgcactttaaccta 7898689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 282 - 406
Target Start/End: Original strand, 13570529 - 13570655
Alignment:
Q  282 tcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggg-gcaaaattatagtttttgtatttaggaggccaaaattgcaagtttttta 380  Q
    ||||||||| |||||||||||||| ||| ||||| |||||||||| ||||  ||||||||||||||||||| ||| | | | |||||||||||||||| |    
T  13570529 tcaaaattggcaaaaaggatcaaagttgtaaagggactaattcttgggggaccaaaattatagtttttgtacttaagggactaaaattgcaagtttttga 13570628  T
Q  381 aagtta-gggtggaaaaatgcacttta 406  Q
    |||||| |||| |||||||||||||||    
T  13570629 aagttatgggtagaaaaatgcacttta 13570655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 267 - 415
Target Start/End: Complemental strand, 18299517 - 18299367
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaa 365  Q
    ||||||||||||  |||||||||||| ||||||||||||  |||||| |  |||| || |||||||| |||||| |||||||| || ||||| |||||||    
T  18299517 tcagcattgacttggtcaaaattgaccaaaaggatcaaagatgcaaaagggctaaatcatagggggccaaaattgtagtttttatacttaggtggccaaa 18299418  T
Q  366 attgcaagttttttaaagtta-gggtggaaaaatgcactttaacctaaaat 415  Q
    |||| |||||||| ||||||| |||||||||| ||||||||| || |||||    
T  18299417 attgaaagtttttgaaagttacgggtggaaaagtgcactttagccaaaaat 18299367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 248 - 412
Target Start/End: Complemental strand, 18904530 - 18904364
Alignment:
Q  248 tacacgcatggcatgccactcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggg-ggcaaaattatagttt 346  Q
    ||||||| |||||||||||||||| |||||| ||| ||||||| | ||||||| ||||  || |||||  |||||||||||||   ||||||| ||||||    
T  18904530 tacacgcgtggcatgccactcagctttgactaagttaaaattggccaaaaggaccaaagatgtaaaggggctaattcttagggaaccaaaattgtagttt 18904431  T
Q  347 ttgtatttaggaggccaaaattgcaagttttttaaagtt-agggtggaaaaatgcactttaacctaa 412  Q
    ||||| ||| | ||||||||||||| |||||| |||||| |||| |||||| ||||||||| |||||    
T  18904430 ttgtacttaaggggccaaaattgcacgtttttgaaagttaaggggggaaaagtgcactttagcctaa 18904364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 294 - 412
Target Start/End: Original strand, 23869519 - 23869638
Alignment:
Q  294 aaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagtt-agggtg 391  Q
    ||||||||||||  ||||||||  |||| |||||||| || |||||| ||||||||||||||||| ||||||||||||||| ||||||||||| ||||||    
T  23869519 aaaaggatcaaagatgcaaaggggctaaatcttagggagctaaaattgtagtttttgtatttagggggccaaaattgcaag-tttttaaagttaagggtg 23869617  T
Q  392 gaaaaatgcactttaacctaa 412  Q
    ||||| ||||||||| |||||    
T  23869618 gaaaagtgcactttagcctaa 23869638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 281 - 411
Target Start/End: Original strand, 38840464 - 38840596
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||||  |||||||| |||||||||| ||  |||| ||||||||||| |||||| ||||||||||| ||||| ||| ||||||||||||||||     
T  38840464 gtcaaaattgatcaaaaggattaaaattgcaatggggctaaatcttagggggctaaaattgtagtttttgtacttagggggctaaaattgcaagtttttg 38840563  T
Q  380 aaagtt-agggtggaaaaatgcactttaaccta 411  Q
    |||||| |||| |||||| ||||||||| ||||    
T  38840564 aaagttaaggggggaaaagtgcactttagccta 38840596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 323 - 417
Target Start/End: Complemental strand, 18869011 - 18868916
Alignment:
Q  323 tcttagggggcaaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagtta-gggtggaaaaatgcactttaacctaaaattt 417  Q
    ||||||||  ||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| | ||||||| ||||| ||||    
T  18869011 tcttagggatcaaaattgtagtttttgtatttaggaggccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagcctaatattt 18868916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 281 - 414
Target Start/End: Complemental strand, 38839372 - 38839237
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||||| |||| ||| |||||||||| ||  |||| ||||||||||| |||||| ||||||||||| ||||| ||| ||||||||||||||||     
T  38839372 gtcaaaattgaccaaaatgattaaaattgcaatggggctaaatcttagggggccaaaattgtagtttttgtagttagggggctaaaattgcaagtttttg 38839273  T
Q  380 aaagtt-agggtggaaaaatgcactttaacctaaaa 414  Q
    ||| || |||| | |||||||||||||| |||||||    
T  38839272 aaaattaagggggaaaaaatgcactttagcctaaaa 38839237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 406
Target Start/End: Complemental strand, 22848322 - 22848194
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||||  ||||||| ||||  ||||||||  |||| |||||||| || |||||| ||||||||||||||||| | ||||||||||||||||||    
T  22848322 agtcaaaattgatcaaaaggaccaaagctgcaaaggggctaaatcttagggagccaaaattgtagtttttgtatttaggggaccaaaattgcaagttttt 22848223  T
Q  379 taaagttagggtgg-aaaaatgcacttta 406  Q
     |||||||||| || |||| |||||||||    
T  22848222 gaaagttaggggggtaaaagtgcacttta 22848194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 281 - 387
Target Start/End: Original strand, 11258782 - 11258889
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||||| ||||||||||||  ||||| ||  |||| ||||||||| | |||||| ||||||||||| ||||| ||||||||||||||||||||     
T  11258782 gtcaaaattgaccaaaaggatcaaatctgcaatggggctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaattgcaagtttttg 11258881  T
Q  380 aaagttag 387  Q
    ||||||||    
T  11258882 aaagttag 11258889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 18905247 - 18905188
Alignment:
Q  15 aagaaaagagaaaaagaggagataaggatgatcttgtttctacttcaacaaaaggatgat 74  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18905247 aagaagagagaaaaagaggagataaggatgatcttgtttctacttcaacaaaatgatgat 18905188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 270 - 406
Target Start/End: Complemental strand, 28618062 - 28617926
Alignment:
Q  270 gcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaaaattatagtttttgtatttaggaggccaaaattg 369  Q
    ||||||| | ||||||||| ||| ||||  | ||||  ||||||||  |||| |||||||||||||||||  |||||||||| || || |||||||||||    
T  28618062 gcattgaattagtcaaaatagaccaaaataaccaaagatgcaaaggggctaaatcttagggggcaaaattgaagtttttgtacttggggggccaaaattg 28617963  T
Q  370 caagttttttaaagttagggtggaaaaatgcacttta 406  Q
    |||| |||| |||||||||| | ||||||| ||||||    
T  28617962 caagattttgaaagttagggagaaaaaatgtacttta 28617926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 281 - 414
Target Start/End: Original strand, 7899853 - 7899988
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||||| |||| ||| ||| || ||| ||  |||| ||||||||||| |||||| |||||| |||| ||||| | ||||||||||||||||||     
T  7899853 gtcaaaattgaccaaaaagattaaagttacaatggggctaaatcttagggggctaaaattgtagtttctgtacttaggggaccaaaattgcaagtttttg 7899952  T
Q  380 aaagtt-agggtggaaaaatgcactttaacctaaaa 414  Q
    |||||| |||| |||||| ||||||||| |||||||    
T  7899953 aaagttaaggggggaaaagtgcactttagcctaaaa 7899988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 280 - 406
Target Start/End: Complemental strand, 13030420 - 13030295
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||||| |||| || ||||  |||||| || |||| ||||||||||| |||||| || |||||||| ||||| |||||||||| |||||||||    
T  13030420 agtcaaaattgaccaaaatgaccaaagatgcaaaagagctaaatcttagggggcaaaaattgtaatttttgtacttagg-ggccaaaattacaagttttt 13030322  T
Q  379 taaagttagggtggaaaaatgcacttta 406  Q
     |||||||||| |||||| |||||||||    
T  13030321 gaaagttaggg-ggaaaagtgcacttta 13030295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 280 - 414
Target Start/End: Original strand, 18905958 - 18906093
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    ||||||||||||  |||| || ||||  |||||| || |||| |||||||||  |||||| ||||||||||| ||||| ||| ||||||||||||||||     
T  18905958 agtcaaaattgatcaaaaagaccaaagatgcaaatgagctaaatcttaggggctaaaattgtagtttttgtacttagggggctaaaattgcaagtttttg 18906057  T
Q  380 aaagttag-ggtggaaaaatgcactttaacctaaaa 414  Q
    ||||||||  | |||||| ||||||||| |||||||    
T  18906058 aaagttagaaggggaaaagtgcactttagcctaaaa 18906093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 414
Target Start/End: Complemental strand, 16446231 - 16446149
Alignment:
Q  333 caaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagtt-agggtggaaaaatgcactttaacctaaaa 414  Q
    ||||||| ||||||||||||||| ||||  |||||||||||||||| |||||| ||||| ||||||||||||||| |||||||    
T  16446231 caaaattgtagtttttgtatttatgaggttaaaattgcaagtttttgaaagttaagggtagaaaaatgcactttagcctaaaa 16446149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 246 - 406
Target Start/End: Original strand, 18300660 - 18300820
Alignment:
Q  246 attacacgcatggcatg-ccactcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaaaattatagt 344  Q
    ||||||||  ||||||| ||| ||||||||||||   ||||||||| | ||||||| ||||  ||||||||  |||| |  |||||| ||||||| ||||    
T  18300660 attacacgtgtggcatgtccaatcagcattgacttgatcaaaattgtccaaaaggaccaaagatgcaaaggggctaaattataggggtcaaaattgtagt 18300759  T
Q  345 ttttgtatttaggaggccaaaattgcaagttttttaaagttagggtggaaaaatgcacttta 406  Q
    ||||||| ||||| || ||||||||||||||| | |||||||||| |||||| |||| ||||    
T  18300760 ttttgtacttagggggtcaaaattgcaagtttatgaaagttaggg-ggaaaagtgcaattta 18300820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 246 - 389
Target Start/End: Complemental strand, 24475390 - 24475245
Alignment:
Q  246 attacacgcatggcatg-ccactcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatag 343  Q
    ||||||||| ||| ||| ||| ||||||||||||  |||||||||||| ||||||| ||||  |||||| || |||| |  ||||||| ||||||| |||    
T  24475390 attacacgcgtggaatgtccaatcagcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaatgagctaaattatagggggccaaaattgtag 24475291  T
Q  344 tttttgtatttaggaggccaaaattgcaagttttttaaagttaggg 389  Q
    ||||| || ||||| ||| |||||| ||||||||| ||||||||||    
T  24475290 tttttatacttagggggcaaaaattacaagtttttgaaagttaggg 24475245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 285 - 417
Target Start/End: Original strand, 22587929 - 22588062
Alignment:
Q  285 aaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaag 383  Q
    |||||| | ||||||| ||||  ||||||||  |||| ||||| ||||| |||||| |||||||||||  |||| |||||||||||||||||||| ||||    
T  22587929 aaattggccaaaaggaccaaagatgcaaaggggctaaatcttaaggggccaaaattgtagtttttgtacatagg-ggccaaaattgcaagtttttgaaag 22588027  T
Q  384 tta-gggtggaaaaatgcactttaacctaaaattt 417  Q
    ||| | | |||||||||||||||| ||| ||||||    
T  22588028 ttatgaggggaaaaatgcactttagccttaaattt 22588062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 422 - 516
Target Start/End: Complemental strand, 27206461 - 27206367
Alignment:
Q  422 tgagattgatggtataggataggggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatgcctcgccaatctcctgacttag 516  Q
    ||||||||| || ||||||| ||||||||  || ||||||||||||||| ||| | ||||||||||| ||||||||  ||||||||||| |||||    
T  27206461 tgagattgacggcataggatgggggttctgcggggtgccaacctagttgggatgttgttgcttccccctgatgcctgtccaatctcctggcttag 27206367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 270 - 397
Target Start/End: Original strand, 41879173 - 41879300
Alignment:
Q  270 gcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaatt 368  Q
    |||||||||| |||||||||||  |||| ||| |||||||||| ||  |||| | ||||||||  |||||| |||||| |||| ||||| ||||||||||    
T  41879173 gcattgactg-gtcaaaattgatcaaaatgattaaaattgcaatggtgctaaattttagggggttaaaattgtagtttatgtacttagggggccaaaatt 41879271  T
Q  369 gcaagttttttaaagttagggtggaaaaa 397  Q
    |||||||||| ||| ||| || |||||||    
T  41879272 gcaagtttttgaaaattaagggggaaaaa 41879300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 406
Target Start/End: Complemental strand, 1033284 - 1033214
Alignment:
Q  335 aaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttagggtggaaaaatgcacttta 406  Q
    |||||||| |||| ||||||||| |||||||||||||||||||| |||||||||| |||||| | |||||||    
T  1033284 aaattataattttggtatttagg-ggccaaaattgcaagtttttaaaagttaggggggaaaagtacacttta 1033214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 411
Target Start/End: Complemental strand, 18797378 - 18797244
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||| | ||||||| ||||  ||||||||  |||| | |||||||| ||||||| |||||||  || ||| | || |||||||||||||||||    
T  18797378 agtcaaaattggctaaaaggaccaaagatgcaaaggggctaaattttagggggtcaaaattgtagttttaatacttaaggggtcaaaattgcaagttttt 18797279  T
Q  379 taaagtta--gggtggaaaaatgcactttaaccta 411  Q
     |||||||  |||||||||| ||||||||| ||||    
T  18797278 gaaagttagggggtggaaaagtgcactttagccta 18797244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 406
Target Start/End: Complemental strand, 41878224 - 41878095
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgca---agttt 376  Q
    |||||||||||| |||| ||| |||||||||| ||  |||| ||||| ||||| |||||| |||||| |||| ||||| |||||||||||||   |||||    
T  41878224 gtcaaaattgaccaaaaagattaaaattgcaatggggctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaaaattgcaaatagttt 41878125  T
Q  377 tttaaagttagggtggaaaaatgcacttta 406  Q
    || ||||||| || || ||| |||||||||    
T  41878124 ttgaaagttaaggggggaaagtgcacttta 41878095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 333 - 387
Target Start/End: Complemental strand, 13568049 - 13567995
Alignment:
Q  333 caaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttag 387  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||| ||| ||||    
T  13568049 caaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaacttag 13567995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 387
Target Start/End: Complemental strand, 11257786 - 11257645
Alignment:
Q  247 ttacacgcatggcatgccactcag-cattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagt 344  Q
    |||||| | ||||||||||| ||| | ||||||  |||||||||||  |||||||||||| |||||| ||  |||| ||||||| ||| |||||| ||||    
T  11257786 ttacacacgtggcatgccacgcaggcgttgactatgtcaaaattgatcaaaaggatcaaatttgcaatggggctaaatcttaggaggccaaaattgtagt 11257687  T
Q  345 ttttgtatttaggaggccaaaattgcaagttttttaaagttag 387  Q
    |||| || ||||| |   |||||||||||||||| ||||||||    
T  11257686 ttttatacttagg-gtttaaaattgcaagtttttgaaagttag 11257645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 508
Target Start/End: Complemental strand, 20374208 - 20374110
Alignment:
Q  410 taaaattttctctgagattgatggtataggataggggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatgcctcgccaatctcc 508  Q
    ||||||||| |||||| |||   | ||||||| ||||||||  || ||| ||||||||||| ||| ||||||||||||||||||| ||  |||||||||    
T  20374208 taaaattttatctgagtttggcagcataggatgggggttctgcggggtggcaacctagttgggatgtcgttgcttccccttgatgtctgtccaatctcc 20374110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 417
Target Start/End: Original strand, 26545492 - 26545630
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||||  |||| || ||||  ||||||||  |||| |||||| ||| |||||||||| |||||||||||| | || ||||||||||| |||||     
T  26545492 gtcaaaattgatcaaaatgaccaaagatgcaaaggggctaaatcttagagggtcaaaattataatttttgtatttaaggggtcaaaattgcaaatttttg 26545591  T
Q  380 aaagttagggtggaaaaa-tgcactttaacctaaaattt 417  Q
    ||||| | |  ||||||| ||||||||| | ||||||||    
T  26545592 aaagtcatgaaggaaaaagtgcactttagcttaaaattt 26545630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 333 - 406
Target Start/End: Original strand, 802615 - 802688
Alignment:
Q  333 caaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttagggtggaaaaatgcacttta 406  Q
    ||||||| |||||||||||   ||| |||||||||||||||||||| ||| |||||| |||||| | |||||||    
T  802615 caaaattgtagtttttgtacacagggggccaaaattgcaagtttttgaaacttaggggggaaaagtacacttta 802688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 256 - 372
Target Start/End: Original strand, 27553711 - 27553827
Alignment:
Q  256 tggcatgccactcag-cattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaaaattatagtttttgtattt 354  Q
    |||||||||||| || | ||||||  |||||||||||| |||||| || | ||||||||||  |||| ||||||||||||||||| |  ||||| |  ||    
T  27553711 tggcatgccacttaggcgttgactcggtcaaaattgaccaaaagg-tcgatattgcaaaggggctaaatcttagggggcaaaattttcattttttttatt 27553809  T
Q  355 aggaggccaaaattgcaa 372  Q
    ||||||||||||| ||||    
T  27553810 aggaggccaaaatcgcaa 27553827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 32739705 - 32739644
Alignment:
Q  328 gggggcaaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttaggg 389  Q
    |||| ||||||| |||||||||||  || | |||||||||||||||||||| ||||||||||    
T  32739705 ggggccaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaagttaggg 32739644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 494
Target Start/End: Complemental strand, 3914324 - 3914252
Alignment:
Q  422 tgagattgatggtataggataggggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatg 494  Q
    ||||||||| ||||||||||  | |||| | || ||||||||||||||| ||| |||||||||| ||||||||    
T  3914324 tgagattgacggtataggatgagagttcatcggggtgccaacctagttgggatgtcgttgcttctccttgatg 3914252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 22587640 - 22587522
Alignment:
Q  270 gcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaatt 368  Q
    |||||||||| |||||||||| | ||||||| ||||  |||||||   |||| |||||||||| ||||||| |||||||||||  |||| | ||||||||    
T  22587640 gcattgactg-gtcaaaattggccaaaaggaccaaagatgcaaagaggctaaatcttagggggccaaaattgtagtttttgta-ataggggaccaaaatt 22587543  T
Q  369 gcaagttttttaaagttaggg 389  Q
    | || ||||| ||||||||||    
T  22587542 ggaactttttgaaagttaggg 22587522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 18905170 - 18905139
Alignment:
Q  99 tcaattgaaatttttgtgctttgttgttatgt 130  Q
    ||||||||||||||||||||||||||||||||    
T  18905170 tcaattgaaatttttgtgctttgttgttatgt 18905139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 385
Target Start/End: Original strand, 24476862 - 24476920
Alignment:
Q  327 agggggcaaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagtt 385  Q
    ||||| ||||||| ||||||||||| ||||| | |||||||| ||||||||| ||||||    
T  24476862 aggggtcaaaattgtagtttttgtacttaggggaccaaaattacaagtttttaaaagtt 24476920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 406
Target Start/End: Original strand, 21837299 - 21837351
Alignment:
Q  353 ttaggaggccaaaattgcaagttttttaaagttagggtggaaaaatgcacttta 406  Q
    ||||| |||||||||||||||||||| |||||||||| | |||| |||||||||    
T  21837299 ttagggggccaaaattgcaagtttttgaaagttaggg-gaaaaagtgcacttta 21837351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 3e-34; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 281 - 410
Target Start/End: Original strand, 28539791 - 28539921
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||| |||||||||||||| ||||||||| ||||| ||||||||| | |||||| ||||||||||| ||||  || |||||||||||||||||     
T  28539791 gtcaaaattggcaaaaaggatcaaagttgcaaagggactaaatcttaggggaccaaaattgtagtttttgtacttagagggtcaaaattgcaagttttta 28539890  T
Q  380 aaagttagggtggaaaaatgcactttaacct 410  Q
    |||||||||| ||||||||||||||||||||    
T  28539891 aaagttaggggggaaaaatgcactttaacct 28539921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 281 - 414
Target Start/End: Complemental strand, 28538806 - 28538671
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    ||||||||||||||||||||||||| |||||||||  |||| ||||||||||| |||||| ||||||||||| ||| | || |||||||||||||||||     
T  28538806 gtcaaaattgacaaaaaggatcaaagttgcaaaggggctaaatcttagggggctaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttg 28538707  T
Q  380 aaagtta-gggtggaaaaatgcactttaacctaaaa 414  Q
    ||||||| |||||||||| ||||||||| |||||||    
T  28538706 aaagttacgggtggaaaagtgcactttagcctaaaa 28538671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 281 - 406
Target Start/End: Complemental strand, 36485430 - 36485303
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    ||||||||||||||||| ||||||| |||||||||   ||| ||||||||||| |||||||||||||||||| ||| |||| |||||||| |||||||||    
T  36485430 gtcaaaattgacaaaaatgatcaaagttgcaaaggggttaaatcttagggggccaaaattatagtttttgtacttaagaggtcaaaattgtaagtttttt 36485331  T
Q  380 aaagtta-gggtggaaaaatgcacttta 406  Q
    ||||||| ||||||||||||||||||||    
T  36485330 aaagttaggggtggaaaaatgcacttta 36485303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 281 - 418
Target Start/End: Original strand, 36486459 - 36486598
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    ||||||||||||||||||||||||| ||||||||| ||||| ||||||||| | |||||| ||||||||||| ||||| || |||||||||||||||||     
T  36486459 gtcaaaattgacaaaaaggatcaaagttgcaaagggactaaatcttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 36486558  T
Q  380 aaagttagggtggaaaaa-tgcactttaacctaaaatttt 418  Q
    |||||||||| ||||||| ||||||| | ||| |||||||    
T  36486559 aaagttaggggggaaaaagtgcacttcagccttaaatttt 36486598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 280 - 406
Target Start/End: Complemental strand, 19753042 - 19752915
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||||| ||||||| ||||  ||||| ||  |||| || |||||||| |||||| ||||||||||| ||||| ||||||||||||||||||||    
T  19753042 agtcaaaattgaccaaaaggaccaaagatgcaatggggctaaatcatagggggccaaaattgtagtttttgtacttagggggccaaaattgcaagttttt 19752943  T
Q  379 taaagttagggtggaaaaatgcacttta 406  Q
     |||||||||| |||||| |||||||||    
T  19752942 gaaagttaggggggaaaagtgcacttta 19752915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 282 - 413
Target Start/End: Complemental strand, 25523198 - 25523065
Alignment:
Q  282 tcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagtttttta 380  Q
    ||||||||||  ||||||||||||  ||||||||  |||| |||||||||| ||||||| ||||||||||| ||||| ||| |||||||||||||||| |    
T  25523198 tcaaaattgatcaaaaggatcaaagatgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggctaaaattgcaagtttttga 25523099  T
Q  381 aagtt-agggtggaaaaatgcactttaacctaaa 413  Q
    ||||| |||| |||||| ||||||||| ||||||    
T  25523098 aagttaaggggggaaaagtgcactttagcctaaa 25523065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 256 - 406
Target Start/End: Original strand, 22940568 - 22940720
Alignment:
Q  256 tggcatgccactcag-cattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaaaattatagtttttgtattt 354  Q
    |||||||||||| || | ||||||  |||||||||||| |||||||| |||  || |||||  |||| | ||||||| ||||||| || |||||||| ||    
T  22940568 tggcatgccacttaggcgttgacttggtcaaaattgaccaaaaggataaaagatgaaaaggggctaaattttaggggtcaaaattgtaatttttgtactt 22940667  T
Q  355 aggaggccaaaattgcaagttttttaaagtt-agggtggaaaaatgcacttta 406  Q
    ||| |||||||||||||||||||| |||||| |||| |||||| |||||||||    
T  22940668 agggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 22940720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 280 - 411
Target Start/End: Original strand, 19754100 - 19754234
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    |||||||||||   ||||||| ||||  ||||| ||  |||| || |||||||| |||||| ||||||||||||||||| ||||||||||||||||||||    
T  19754100 agtcaaaattgttcaaaaggaccaaagatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttagggggccaaaattgcaagttttt 19754199  T
Q  379 taaagttagggtgg--aaaaatgcactttaaccta 411  Q
     |||||||||| ||  |||||||||||||| ||||    
T  19754200 gaaagttaggggggaaaaaaatgcactttagccta 19754234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 246 - 411
Target Start/End: Original strand, 16650790 - 16650958
Alignment:
Q  246 attacacgcatggcatgccactca-gcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatag 343  Q
    ||||||| | ||||||||||| || || ||||||   ||||||||||| ||||||| ||||  |||||| |  ||||  |||||||||| |||||| |||    
T  16650790 attacacacgtggcatgccacacatgcgttgacttgatcaaaattgaccaaaaggaccaaagatgcaaatgggctaaaccttagggggctaaaattgtag 16650889  T
Q  344 tttttgtatttaggaggccaaaattgcaagttttttaaagtt-agggtggaaaaatgcactttaaccta 411  Q
    ||||| || ||||| || ||||||||||||||||| |||||| ||||||||||| ||||||||| ||||    
T  16650890 tttttatacttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagccta 16650958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 273 - 406
Target Start/End: Complemental strand, 1796192 - 1796057
Alignment:
Q  273 ttgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgca 371  Q
    |||||||||||||||||||   ||||||  |  |||||||| |   |||||||| ||||  ||||||| ||||||||||| ||||| ||||||| |||||    
T  1796192 ttgactgagtcaaaattgaactaaaggactactattgcaaatgggttaattcttgggggatcaaaattgtagtttttgtacttaggtggccaaagttgca 1796093  T
Q  372 agttttttaaagtta-gggtggaaaaatgcacttta 406  Q
    ||||||| ||||||| ||||||||||||||||||||    
T  1796092 agtttttgaaagttaggggtggaaaaatgcacttta 1796057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 246 - 410
Target Start/End: Complemental strand, 24333078 - 24332912
Alignment:
Q  246 attacacgcatggcatgccactcag-cattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatag 343  Q
    ||||||| | |||||||||||  || ||||||||| |||||||||||| ||||||| ||||  ||||||||   ||| |||||| ||| ||||||| |||    
T  24333078 attacacacgtggcatgccacgtaggcattgactg-gtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtag 24332980  T
Q  344 tttttgtatttaggaggccaaaattgcaagttttttaaagttagggtggaaaaa-tgcactttaacct 410  Q
    ||||||||  || | |||||||||||||||||||| ||| ||| || ||||||| |||||||||||||    
T  24332979 tttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcactttaacct 24332912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 273 - 413
Target Start/End: Original strand, 20216726 - 20216868
Alignment:
Q  273 ttgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgca 371  Q
    ||||| ||||||||||||||  ||||||  |  |||||||| |  ||||||||| |||||| |||||| |||||||||||| ||||  || |||||||||    
T  20216726 ttgaccgagtcaaaattgacgtaaaggactactattgcaaatgggctaattcttggggggccaaaattgtagtttttgtatatagggagctaaaattgca 20216825  T
Q  372 agttttttaaagtt-agggtggaaaaatgcactttaacctaaa 413  Q
    ||||||| ||| || |||| |||||| ||||||||||||||||    
T  20216826 agtttttgaaaattaaggggggaaaagtgcactttaacctaaa 20216868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 369
Target Start/End: Original strand, 25524068 - 25524158
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattg 369  Q
    ||||||||||||| |||||||  |||  ||||||||  |||| |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  25524068 agtcaaaattgaccaaaaggactaaagatgcaaaggggctaaatcttagggggtcaaaattatagtttttgtacttaggaggccaaaattg 25524158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 280 - 411
Target Start/End: Original strand, 18486872 - 18487005
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||||| ||||||| ||||  ||||||||  |||| ||||||||||| |||||| | |||| | || ||||| ||||||||||||||||||||    
T  18486872 agtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgtggtttctatacttagggggccaaaattgcaagttttt 18486971  T
Q  379 taaagtt-agggtggaaaaatgcactttaaccta 411  Q
     |||||| |||| || ||| ||||||||| ||||    
T  18486972 gaaagttaagggggggaaagtgcactttagccta 18487005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 246 - 407
Target Start/End: Complemental strand, 42195298 - 42195136
Alignment:
Q  246 attacacgcatggcatgccac-tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggg-gcaaaattatag 343  Q
    ||||||| | ||||||||||  ||||| ||||||  |||||||||||| ||||||| ||||  ||||||||  |||| |||||||||  ||||||| |||    
T  42195298 attacacacgtggcatgccaaatcagcgttgacttggtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttaggggaccaaaattgtag 42195199  T
Q  344 tttttgtatttaggaggccaaaattgcaagttttttaaagttagggtggaaaaatgcactttaa 407  Q
     |||||||  |||| ||||||||| ||||  |||||||||||| || |||||| ||||||||||    
T  42195198 attttgtacatagggggccaaaatcgcaa-ctttttaaagttaagggggaaaagtgcactttaa 42195136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 308 - 415
Target Start/End: Original strand, 1016862 - 1016970
Alignment:
Q  308 tgcaaaggaactaattcttagggggcaaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttagggtg-gaaaaatgcacttta 406  Q
    ||||||||| |||||||||||| | ||||||| |||||||||||  ||| || |||||||| ||| ||||| ||| |||||| |  |||||| |||||||    
T  1016862 tgcaaaggagctaattcttaggagtcaaaattgtagtttttgtacatagaagaccaaaattacaattttttaaaaattagggggaaaaaaatacacttta 1016961  T
Q  407 acctaaaat 415  Q
    |||||||||    
T  1016962 acctaaaat 1016970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 267 - 417
Target Start/End: Original strand, 5778793 - 5778945
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaa 365  Q
    ||||| ||||||  ||||||||||   ||||||| |||| |||||| ||  |||| |||||||||| | ||||| | ||||| ||| ||||| ||| |||    
T  5778793 tcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggcaaaa 5778892  T
Q  366 attgcaagttttttaaagttag-ggtggaaaaatgcactttaacctaaaattt 417  Q
    ||||||||||||| |||||||| || |||||| ||||||||| |||| |||||    
T  5778893 attgcaagtttttgaaagttagagggggaaaagtgcactttagcctacaattt 5778945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 318 - 389
Target Start/End: Complemental strand, 7311683 - 7311611
Alignment:
Q  318 ctaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttaggg 389  Q
    |||| ||||||||||| |||||| ||||||||||| || ||||||||| ||||||||||||| ||||||||||    
T  7311683 ctaaatcttagggggctaaaattgtagtttttgtacttgggaggccaatattgcaagtttttgaaagttaggg 7311611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 281 - 411
Target Start/End: Original strand, 40255643 - 40255775
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||||  |||| ||| |||||||||| ||   ||| ||||||||||| |||||| |||||| |||||||||| || |||||||||||||||||     
T  40255643 gtcaaaattgatcaaaaagattaaaattgcaatggggttaaatcttagggggccaaaattgtagtttctgtatttagggggtcaaaattgcaagttttta 40255742  T
Q  380 aaagtt-agggtggaaaaatgcactttaaccta 411  Q
    ||| || || | |||||| ||||||||| ||||    
T  40255743 aaaattaagaggggaaaagtgcactttagccta 40255775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 284 - 386
Target Start/End: Complemental strand, 18154619 - 18154518
Alignment:
Q  284 aaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaag 383  Q
    ||||||||  |||| ||||||| |||||| ||| |||| | |||| |||||||||| ||||||||||| ||||| || |||||||| |||||||| ||||    
T  18154619 aaaattgagcaaaatgatcaaatttgcaatggagctaaattttagagggcaaaattgtagtttttgtacttagg-ggtcaaaattgtaagtttttgaaag 18154521  T
Q  384 tta 386  Q
    |||    
T  18154520 tta 18154518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 280 - 406
Target Start/End: Complemental strand, 18485276 - 18485141
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc--------aaaattatagtttttgtatttaggaggccaaaattgca 371  Q
    |||||||||| || ||||||||||||  ||||||||  |||| |||||||||||        |||||| | |||||  || ||||| |||||||||||||    
T  18485276 agtcaaaattaaccaaaaggatcaaagatgcaaaggggctaaatcttagggggccaaaacccaaaattgttgttttgatacttagggggccaaaattgca 18485177  T
Q  372 agttttttaaagttagggtggaaaaa-tgcacttta 406  Q
    |||||||||||||||| | ||||||| |||||||||    
T  18485176 agttttttaaagttagaggggaaaaagtgcacttta 18485141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 273 - 406
Target Start/End: Complemental strand, 20214333 - 20214199
Alignment:
Q  273 ttgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattctt-agggggcaaaattatagtttttgtatttaggaggccaaaattgca 371  Q
    ||||| ||||||||||||||| ||||||  |  |||||||| |   |||||||| ||||| ||||||| |||||||||||  |||   || |||||||||    
T  20214333 ttgaccgagtcaaaattgacataaaggactactattgcaaatgggataattcttgaggggccaaaattgtagtttttgtacatagagtgctaaaattgca 20214234  T
Q  372 agttttttaaagttagggtggaaaaatgcacttta 406  Q
    ||||||| ||||||| || |||||| |||||||||    
T  20214233 agtttttgaaagttaagggggaaaagtgcacttta 20214199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 318 - 406
Target Start/End: Original strand, 25056389 - 25056479
Alignment:
Q  318 ctaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttagg-gtggaaaaatgcacttta 406  Q
    |||| |||||||||| ||||||| |||||||  || ||||| || ||||||||||||||||| ||||||||| |||||||| |||||||||    
T  25056389 ctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagtttttgaaagttaggagtggaaaagtgcacttta 25056479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 413
Target Start/End: Complemental strand, 5778016 - 5777897
Alignment:
Q  294 aaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttagggtgg 392  Q
    ||||||| |||| |||||| ||  |||| |||||||||| | ||||| | ||||| ||| ||||| || ||||||||||||||||| |||||||||| ||    
T  5778016 aaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttaggg-gg 5777918  T
Q  393 aaaaatgcactttaacctaaa 413  Q
     ||| ||||||||| ||||||    
T  5777917 gaaagtgcactttagcctaaa 5777897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 406
Target Start/End: Complemental strand, 33158181 - 33158101
Alignment:
Q  327 agggggcaaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttagggtg-gaaaaatgcacttta 406  Q
    ||||| ||||||| ||||||||||| |||||  | ||||||||||||||||| |||||||||| |  ||||||||||||||    
T  33158181 aggggtcaaaattgtagtttttgtacttagggtgtcaaaattgcaagtttttgaaagttagggggaaaaaaatgcacttta 33158101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 387
Target Start/End: Original strand, 2686425 - 2686479
Alignment:
Q  333 caaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttag 387  Q
    ||||||||||||||||||| ||| |||  ||||||||||||||||| ||||||||    
T  2686425 caaaattatagtttttgtacttaagagatcaaaattgcaagtttttaaaagttag 2686479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 516
Target Start/End: Complemental strand, 22602110 - 22602016
Alignment:
Q  422 tgagattgatggtataggataggggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatgcctcgccaatctcctgacttag 516  Q
    |||| |||| || ||||||| ||||||||  || ||||||||||||||| ||| |||||| |||||||||||| ||  ||||||| ||| |||||    
T  22602110 tgaggttgacggcataggatgggggttctgcggggtgccaacctagttgggatgtcgttgattccccttgatgtctgtccaatcttctgccttag 22602016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 1015614 - 1015505
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    ||||||||||   ||||||| ||||  |||||||| ||||||||||||||||  |||||| ||| |||||||   ||| ||||||||||| || |||||     
T  1015614 gtcaaaattggggaaaaggaccaaatatgcaaagggactaattcttagggggttaaaattgtaggttttgtacacagggggccaaaattgtaacttttta 1015515  T
Q  380 aaagttaggg 389  Q
    ||||||||||    
T  1015514 aaagttaggg 1015505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 329 - 411
Target Start/End: Complemental strand, 5730523 - 5730439
Alignment:
Q  329 ggggcaaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagtta--gggtggaaaaatgcactttaaccta 411  Q
    ||||| ||||| | ||||| ||| |||||| ||||||||||||||||||| |||||||  ||| |||||| ||||||||| ||||    
T  5730523 ggggctaaattgtggttttggtacttaggaagccaaaattgcaagtttttgaaagttaagggggggaaaagtgcactttagccta 5730439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 406
Target Start/End: Complemental strand, 2186846 - 2186774
Alignment:
Q  334 aaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttagggtggaaaaatgcacttta 406  Q
    |||||| |||||||||||  ||| || |||||||||||| ||||| ||| |||||| | ||||||||||||||    
T  2186846 aaaattgtagtttttgtacatagaagaccaaaattgcaactttttgaaacttagggggaaaaaatgcacttta 2186774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 357
Target Start/End: Complemental strand, 16650157 - 16650045
Alignment:
Q  247 ttacacgcatggcatgccactca-gcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttag-ggggcaaaattatagt 344  Q
    |||||| | ||||||||||| || |||||||||  |||||||||||| ||||||| ||||  ||||||||   ||| |||||| ||| ||||||| ||||    
T  16650157 ttacacacgtggcatgccacacatgcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtagt 16650058  T
Q  345 ttttgtatttagg 357  Q
    ||||||| |||||    
T  16650057 ttttgtacttagg 16650045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 411
Target Start/End: Complemental strand, 25055578 - 25055410
Alignment:
Q  246 attacacgcatggcatgccac-tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatag 343  Q
    ||||||| | ||||||||||  ||||||||||||   ||||||||||  ||||||| ||||  |||||| |  |||| |||||||||| ||||||| |||    
T  25055578 attacacacgtggcatgccaaatcagcattgacttgctcaaaattgatcaaaaggaccaaagatgcaaatgggctaaatcttagggggccaaaattgtag 25055479  T
Q  344 tttttgtatttaggaggccaaaattgcaagttttttaaagttag-ggtggaaaaatgcactttaaccta 411  Q
    ||||| ||  |||| |  ||||||||||||   ||||||||||| || |||||| ||||||||| ||||    
T  25055478 tttttatacataggggatcaaaattgcaagaagtttaaagttagagggggaaaagtgcactttagccta 25055410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 435 - 495
Target Start/End: Original strand, 28637630 - 28637690
Alignment:
Q  435 ataggataggggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatgc 495  Q
    ||||||| ||||||| | || ||||||||||||||| ||| |||| |||||||||||||||    
T  28637630 ataggatgggggttcctcggggtgccaacctagttgggatgtcgtcgcttccccttgatgc 28637690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 411
Target Start/End: Original strand, 33160258 - 33160389
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||| | |||||||| ||| |||||| ||  |||| ||||| |||| ||||||| |||||| | || ||||| ||| ||||||||||||||||     
T  33160258 gtcaaaattggctaaaaggattaaagttgcaatggg-ctaaatcttaaggggtcaaaattgtagtttctatacttagggggctaaaattgcaagtttttg 33160356  T
Q  380 aaagtt-agggtggaaaaatgcactttaaccta 411  Q
    ||| || |||| |||||| ||||||||| ||||    
T  33160357 aaaattaaggggggaaaagtgcactttagccta 33160389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 281 - 378
Target Start/End: Original strand, 1797268 - 1797366
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||| |||| | |||||| |||||||||  |||| ||||| ||| | |||||| |||||||||| | || |  |||||||||||||||||||    
T  1797268 gtcaaaattgaaaaaaggaatcaaagttgcaaaggggctaaatcttaagggaccaaaattgtagtttttgtttataaggagccaaaattgcaagttttt 1797366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 289 - 406
Target Start/End: Complemental strand, 21835162 - 21835044
Alignment:
Q  289 tgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttag 387  Q
    |||| |||||||||||| |||||||||   ||| |||||||||| ||||||| |||||||||||  |||| || ||||||  ||| ||||| ||| ||||    
T  21835162 tgactaaaaggatcaaagttgcaaaggggttaaatcttagggggtcaaaattgtagtttttgtacatagggggtcaaaatcacaactttttcaaacttag 21835063  T
Q  388 ggtggaaaaatgcacttta 406  Q
     | || ||| |||||||||    
T  21835062 agggggaaagtgcacttta 21835044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 411
Target Start/End: Original strand, 25524151 - 25524231
Alignment:
Q  333 caaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagtta--gggtggaaaaatgcactttaaccta 411  Q
    ||||||| ||||||||||| ||||| |||||||||| ||| ||||| ||| |||  ||| |||||| ||||||||| ||||    
T  25524151 caaaattgtagtttttgtacttagggggccaaaattacaaatttttaaaaattaggggggggaaaagtgcactttagccta 25524231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 516
Target Start/End: Original strand, 31792589 - 31792653
Alignment:
Q  451 ttggtgtgccaacctagttgcgatatcgttgcttccccttgatgcctcgccaatctcctgacttag 516  Q
    |||| ||||||||||||||| ||| |||| |||||||| ||||||||| ||||| ||||| |||||    
T  31792589 ttggggtgccaacctagttgggatgtcgtcgcttcccc-tgatgcctcaccaatgtcctggcttag 31792653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 34893739 - 34893686
Alignment:
Q  336 aattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttaggg 389  Q
    |||| |||||||||||  ||||  ||||||||||||||||||| ||||||||||    
T  34893739 aattgtagtttttgtacatagggagccaaaattgcaagtttttgaaagttaggg 34893686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 409
Target Start/End: Complemental strand, 38834191 - 38834087
Alignment:
Q  306 attgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagtt-agggtggaaaaatgcact 403  Q
    |||||||||||||||| |||||||| || |||||| |||||||||||  || | || |||||| |||| ||||| |||||| ||||   |||||||||||    
T  38834191 attgcaaaggaactaaatcttagggagctaaaattgtagtttttgtacataag-ggtcaaaatcgcaactttttaaaagttaaggggaaaaaaatgcact 38834093  T
Q  404 ttaacc 409  Q
    ||||||    
T  38834092 ttaacc 38834087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 2188889 - 2188929
Alignment:
Q  250 cacgcatggcatgccactcagcattgactgagtcaaaattg 290  Q
    ||||| |||||||||||||||  ||||||||||||||||||    
T  2188889 cacgcgtggcatgccactcagtgttgactgagtcaaaattg 2188929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 1e-33; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 281 - 417
Target Start/End: Complemental strand, 24123012 - 24122875
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||||| ||||||| ||||  ||||||| | |||| ||||||||| | |||||||||||||||||| ||||| || ||||||||||| ||||||    
T  24123012 gtcaaaattgaccaaaaggaccaaagatgcaaagaagctaaatcttaggggactaaaattatagtttttgtacttagggggtcaaaattgcaaatttttt 24122913  T
Q  380 aaagttagggtggaaaaatgcactttaacctaaaattt 417  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  24122912 aaagttaggggggaaaaatgcactttagcctaaaattt 24122875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 281 - 406
Target Start/End: Complemental strand, 11287906 - 11287779
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    ||||||||||| ||||| ||||||||||||||||||  ||||||||||||||| |||||| |||||| |||| ||||  |||||||||||||||||||||    
T  11287906 gtcaaaattgataaaaatgatcaaaattgcaaaggagttaattcttagggggccaaaattgtagtttctgtacttagtgggccaaaattgcaagtttttt 11287807  T
Q  380 aaagtta-gggtggaaaaatgcacttta 406  Q
    ||||||| ||||| |||| |||||||||    
T  11287806 aaagttaggggtgaaaaagtgcacttta 11287779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 281 - 406
Target Start/End: Original strand, 12353332 - 12353457
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||||| ||||| || |||||||||| ||  |||| ||||||||||| |||||||||||||| ||| ||||| ||||||||||||||||||||     
T  12353332 gtcaaaattgaccaaaagaattaaaattgcaatggggctaaatcttagggggccaaaattatagtttt-gtacttagggggccaaaattgcaagtttttg 12353430  T
Q  380 aaagttagggtggaaaaatgcacttta 406  Q
    ||||||| || |||||| |||||||||    
T  12353431 aaagttaagggggaaaagtgcacttta 12353457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 280 - 405
Target Start/End: Complemental strand, 45113000 - 45112875
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggg-gcaaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    |||||||||||| ||||| |||||||||||||||||  ||||||||||||||  |||||||||| |||||||| ||| ||| | |||||| ||| |||||    
T  45113000 agtcaaaattgataaaaaagatcaaaattgcaaaggggctaattcttaggggaccaaaattataatttttgtactta-gagactaaaattacaaattttt 45112902  T
Q  379 taaagttagggtggaaaaatgcacttt 405  Q
     |||||||||| |||||||||||||||    
T  45112901 gaaagttagggaggaaaaatgcacttt 45112875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 270 - 411
Target Start/End: Complemental strand, 5514122 - 5513980
Alignment:
Q  270 gcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaatt 368  Q
    ||||||| | ||||||||||||  ||||||| ||||  ||||||||  |||| | |||||||| ||||||| ||||||||||| ||||| ||||||||||    
T  5514122 gcattgaataagtcaaaattgatcaaaaggaccaaagatgcaaaggggctaaattttaggggggcaaaattgtagtttttgtacttagggggccaaaatt 5514023  T
Q  369 gcaagttttttaaagttagggtggaaaaatgcactttaaccta 411  Q
    | |||||||| |||||||||| | |||| ||||||||| ||||    
T  5514022 ggaagtttttgaaagttagggggtaaaagtgcactttagccta 5513980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 267 - 411
Target Start/End: Complemental strand, 11282152 - 11282006
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaa 365  Q
    ||||| ||||||  |||||||||||  |||| |||||||||||||||||   ||| |||||||||| ||||||| |  ||||||||| |||| |||||||    
T  11282152 tcagcgttgactttgtcaaaattgatcaaaaagatcaaaattgcaaaggggttaaatcttagggggtcaaaattgtcatttttgtatatagggggccaaa 11282053  T
Q  366 attgcaagttttttaaagttagggtggaaaaa-tgcactttaaccta 411  Q
    ||||||| ||||| ||||||| || ||||||| ||||||||||||||    
T  11282052 attgcaactttttaaaagttaagggggaaaaagtgcactttaaccta 11282006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 281 - 414
Target Start/End: Complemental strand, 18978149 - 18978015
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    ||||||||||  ||||||||||||| |||||||||  |||| ||||| ||||| |||||| ||||||||||| ||||| ||||||||||| ||| ||||     
T  18978149 gtcaaaattggaaaaaaggatcaaagttgcaaaggggctaaatcttaaggggccaaaattgtagtttttgtacttagggggccaaaattgaaagattttg 18978050  T
Q  380 aaagttagggtggaaaaatgcactttaacctaaaa 414  Q
    |||||||||| |||||| |||  || |||||||||    
T  18978049 aaagttaggggggaaaagtgctattaaacctaaaa 18978015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 281 - 406
Target Start/End: Original strand, 18979091 - 18979218
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||| |||||||||||||| ||||||| |  |||| || || ||||| |||||| |||||||| |||||||| ||||||||||||||||| ||     
T  18979091 gtcaaaattggcaaaaaggatcaaagttgcaaatgggctaaatcataaggggccaaaattgtagtttttatatttagggggccaaaattgcaagttgttg 18979190  T
Q  380 aaagtta-gggtggaaaaatgcacttta 406  Q
    ||||||| ||| |||||| |||||||||    
T  18979191 aaagttagggggggaaaagtgcacttta 18979218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 280 - 404
Target Start/End: Original strand, 1824048 - 1824174
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||||| ||||||| ||||  ||||||    |||| ||||||||||| |||||| ||||||||||| ||||| | ||||||||||||||||||    
T  1824048 agtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagttttt 1824147  T
Q  379 taaagttag-ggtggaaaaatgcactt 404  Q
     |||||||| || ||||||||||||||    
T  1824148 gaaagttagagggggaaaaatgcactt 1824174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 280 - 404
Target Start/End: Original strand, 1858493 - 1858619
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||||| ||||||| ||||  ||||||    |||| ||||||||||| |||||| ||||||||||| ||||| | ||||||||||||||||||    
T  1858493 agtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaagttttt 1858592  T
Q  379 taaagttag-ggtggaaaaatgcactt 404  Q
     |||||||| || ||||||||||||||    
T  1858593 gaaagttagagggggaaaaatgcactt 1858619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 281 - 414
Target Start/End: Complemental strand, 18971040 - 18970906
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattctt-agggggcaaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||| ||||||||| |||| |||||||||   ||| |||| ||||| ||||||| ||||||||||| ||||| ||||||||||| ||| ||||     
T  18971040 gtcaaaattggcaaaaaggaccaaagttgcaaaggggttaaatcttcaggggtcaaaattgtagtttttgtacttagggggccaaaattgaaagattttg 18970941  T
Q  380 aaagttagggtggaaaaatgcactttaacctaaaa 414  Q
    |||||||||| |||||| |||  || |||||||||    
T  18970940 aaagttaggggggaaaagtgctattaaacctaaaa 18970906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 408
Target Start/End: Original strand, 29968296 - 29968436
Alignment:
Q  268 cagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaa-aattatagtttttgtatttaggaggccaaaa 366  Q
    |||||||||| | |||||||||| | |||| ||| ||| |||||| ||  |||| ||||||||| | | |||| ||||||||||| ||||| ||||||||    
T  29968296 cagcattgaccg-gtcaaaattggccaaaatgattaaagttgcaatggggctaaatcttaggggaccagaattgtagtttttgtacttagggggccaaaa 29968394  T
Q  367 ttgcaagttttttaaagttagggtggaaaaatgcactttaac 408  Q
    |||||||||||| ||||||| || |||||| |||||||||||    
T  29968395 ttgcaagtttttaaaagttaagggggaaaagtgcactttaac 29968436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 406
Target Start/End: Complemental strand, 30335795 - 30335642
Alignment:
Q  256 tggcatgccactca-gcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatt 353  Q
    ||||||||||| || || ||||||  |||||||||||  ||||||| ||||  ||||||||  |||| ||||||||||  |||||| || |||||||| |    
T  30335795 tggcatgccacacatgcgttgacttggtcaaaattgaacaaaaggaccaaagatgcaaaggggctaaatcttagggggttaaaattgtaatttttgtact 30335696  T
Q  354 taggaggccaaaattgcaagttttttaaagtt-agggtggaaaaatgcacttta 406  Q
    |||   ||||||||||||||||||| |||||| |||||||||||||||||||||    
T  30335695 tagcgagccaaaattgcaagtttttaaaagttaagggtggaaaaatgcacttta 30335642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 406
Target Start/End: Complemental strand, 10006475 - 10006347
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||||| ||||||| ||||  ||||||||  |||| ||||||||||| |||||| | |||||  || ||||| ||||||||||||||||||||    
T  10006475 agtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgttgttttgatacttagggggccaaaattgcaagttttt 10006376  T
Q  379 taaagttag-ggtggaaaaatgcacttta 406  Q
     |||||||| || |||||| |||||||||    
T  10006375 gaaagttagagggggaaaagtgcacttta 10006347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 406
Target Start/End: Original strand, 22221334 - 22221462
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||| | ||||||||||||  || |||||  |||| |||||||||| ||||||| |||||||  || ||||| || |||||||||||||||||    
T  22221334 agtcaaaattggctaaaaggatcaaagatgtaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagttttt 22221433  T
Q  379 taaagtta-gggtggaaaaatgcacttta 406  Q
     ||||||| |||||||||| |||||||||    
T  22221434 gaaagttaggggtggaaaagtgcacttta 22221462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 406
Target Start/End: Original strand, 22227676 - 22227804
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||| | ||||||||||||  || |||||  |||| |||||||||| ||||||| |||||||  || ||||| || |||||||||||||||||    
T  22227676 agtcaaaattggctaaaaggatcaaagatgtaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagttttt 22227775  T
Q  379 taaagtta-gggtggaaaaatgcacttta 406  Q
     ||||||| |||||||||| |||||||||    
T  22227776 gaaagttaggggtggaaaagtgcacttta 22227804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 280 - 411
Target Start/End: Original strand, 10007733 - 10007866
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||||| ||||||| ||||  ||||||||  |||| ||||||||| | |||||| | |||| | || ||||| ||||||||||||||||||||    
T  10007733 agtcaaaattgacgaaaaggaccaaagatgcaaaggggctaaatcttaggggaccaaaattgtggtttctatacttagggggccaaaattgcaagttttt 10007832  T
Q  379 taaagtt-agggtggaaaaatgcactttaaccta 411  Q
     |||||| |||| |||||| ||||||||| ||||    
T  10007833 gaaagttaaggggggaaaagtgcactttagccta 10007866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 411 - 516
Target Start/End: Complemental strand, 17275677 - 17275573
Alignment:
Q  411 aaaattttctctgagattgatggtataggataggggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatgcctcgccaatctcctg 510  Q
    ||||||||||||||||||| ||||||||||| ||||||||  || ||||| || |||||| ||| |||||||||||| |||||||||  ||||| |||||    
T  17275677 aaaattttctctgagattggtggtataggatgggggttctgcggggtgcc-acttagttgggatgtcgttgcttcccgttgatgcctgtccaatatcctg 17275579  T
Q  511 acttag 516  Q
     |||||    
T  17275578 gcttag 17275573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 415
Target Start/End: Complemental strand, 12352051 - 12351915
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||| | |||||| | |||||||||| |   |||| |||||||||| ||||||| ||||||||||| ||||| || ||||||||||| |||||     
T  12352051 gtcaaaattgtccaaaagggttaaaattgcaatgaggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaaatttttg 12351952  T
Q  380 aaagtt-agggtggaaaaatgcactttaacctaaaat 415  Q
    |||||| |||| || ||||||||||||| ||| ||||    
T  12351951 aaagttaagggggggaaaatgcactttagccttaaat 12351915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 333 - 412
Target Start/End: Original strand, 5514294 - 5514373
Alignment:
Q  333 caaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttagggtggaaaaatgcactttaacctaa 412  Q
    ||||||| |||||||||||||||| |||| |||||||||||||||||||| ||||||   |||| ||||||||| |||||    
T  5514294 caaaattgtagtttttgtatttagaaggctaaaattgcaagttttttaaaattaggggataaaagtgcactttagcctaa 5514373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 281 - 395
Target Start/End: Complemental strand, 8388592 - 8388477
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    ||||||||||   ||||||| |||||  |||||||  |||| ||||||||||| ||||||||||||||||||  |||| ||| |||||||||| |||||     
T  8388592 gtcaaaattgggcaaaaggaccaaaaacgcaaaggggctaaatcttagggggccaaaattatagtttttgtacatagggggctaaaattgcaacttttta 8388493  T
Q  380 aaagttagggtggaaa 395  Q
    |||||||||| |||||    
T  8388492 aaagttaggggggaaa 8388477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 246 - 406
Target Start/End: Complemental strand, 22220554 - 22220391
Alignment:
Q  246 attacacgcatggcatgccac-tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatag 343  Q
    ||||||| | ||||||||||  ||||||||||||   ||||||||||  ||||||| ||||  |||||| |  |||| ||||||||||| |||||| |||    
T  22220554 attacacacgtggcatgccaaatcagcattgacttgctcaaaattgatcaaaaggaccaaagatgcaaatgggctaaatcttagggggccaaaattgtag 22220455  T
Q  344 tttttgtatttaggaggccaaaattgcaagttttttaaagttag-ggtggaaaaatgcacttta 406  Q
    ||||| ||  |||| || ||||||||||||| |||||||||||| || |||||| |||||||||    
T  22220454 tttttatacatagggggtcaaaattgcaagtattttaaagttagagggggaaaagtgcacttta 22220391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 281 - 386
Target Start/End: Original strand, 24123869 - 24123975
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||||| ||||||| ||||  ||||||||  |||| ||||||| ||| |||||| || |||| ||| ||| ||||||||||||||||||||||     
T  24123869 gtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttaggaggctaaaattgtaattttagtacttaagaggccaaaattgcaagtttttg 24123968  T
Q  380 aaagtta 386  Q
    |||||||    
T  24123969 aaagtta 24123975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 406
Target Start/End: Original strand, 30336446 - 30336599
Alignment:
Q  256 tggcatgccactca-gcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatt 353  Q
    ||||||||||| || |||||||||  |||||||||||| ||||||| ||||  ||||||    |||| |||||| |||  |||||| ||||||||||| |    
T  30336446 tggcatgccacacatgcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagagggttaaaattgtagtttttgtact 30336545  T
Q  354 taggaggccaaaattgcaagttttttaaagttagggtggaa-aaatgcacttta 406  Q
    |||||||| ||||||  |||||||| |||||||||| |||| || |||||||||    
T  30336546 taggaggctaaaattataagtttttgaaagttaggggggaagaagtgcacttta 30336599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 415 - 516
Target Start/End: Complemental strand, 43848188 - 43848087
Alignment:
Q  415 ttttctctgagattgatggtataggataggggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatgcctcgccaatctcctgactt 514  Q
    |||| ||||||||||  || |||||||  |||||||  || ||||||||||||||| ||| | ||||||||||||||||||||  ||||||||||| |||    
T  43848188 ttttatctgagattggcggcataggatgagggttctgcggggtgccaacctagttgggatgttgttgcttccccttgatgcctgtccaatctcctggctt 43848089  T
Q  515 ag 516  Q
    ||    
T  43848088 ag 43848087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 256 - 406
Target Start/End: Original strand, 11283155 - 11283307
Alignment:
Q  256 tggcatgccactcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggg-gcaaaattatagtttttgtattt 354  Q
    |||||||||||| ||| ||||||  |||||||||||| |||| |||||||||||||||||  |||| | |||||||  ||||||| |  ||||| ||  |    
T  11283155 tggcatgccactaagcgttgactttgtcaaaattgactaaaatgatcaaaattgcaaaggggctaaattttaggggaccaaaattgtcatttttatacat 11283254  T
Q  355 aggaggccaaaattgcaagttttttaaagtt-agggtggaaaaatgcacttta 406  Q
    ||| ||| |||||| ||| ||||| |||||| |||| || |||||||||||||    
T  11283255 agggggctaaaattacaactttttgaaagttaagggggggaaaatgcacttta 11283307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 389
Target Start/End: Original strand, 24488688 - 24488759
Alignment:
Q  318 ctaattcttagggggcaaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttaggg 389  Q
    |||| ||||| ||||||||||| | |||||  |||||||| |||||||||||||||||||| ||||||||||    
T  24488688 ctaaatcttacggggcaaaattgttgttttgatatttagggggccaaaattgcaagtttttgaaagttaggg 24488759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 509
Target Start/End: Complemental strand, 17279220 - 17279122
Alignment:
Q  410 taaaattttctctgagattgatggtataggataggggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatgcctcgccaatctcct 509  Q
    |||||||||||||||||||| ||||||||||| ||||||||  || ||||| | ||||||| |||  |||||||||   |||||||||  ||||||||||    
T  17279220 taaaattttctctgagattggtggtataggatgggggttctgcggggtgcc-atctagttgggatgccgttgcttctttttgatgcctgtccaatctcct 17279122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 281 - 406
Target Start/End: Complemental strand, 43661395 - 43661268
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||| ||||| ||||| | ||||  ||||||||  |||| ||||||||||| ||||||||||||||||||  || | | ||||||||| || ||||||    
T  43661395 gtcaaagttgaccaaaagaaccaaagatgcaaaggggctaaatcttagggggccaaaattatagtttttgtacataagggaccaaaattgtaactttttt 43661296  T
Q  380 aaagtt-agggtggaaaaatgcacttta 406  Q
    ||| || ||||| ||||| |||||||||    
T  43661295 aaaattaagggtagaaaagtgcacttta 43661268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 410
Target Start/End: Original strand, 40471107 - 40471248
Alignment:
Q  270 gcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaatt 368  Q
    |||||||||  |||||||||||| |||| || ||||  | |||||    ||| ||||| ||||| |||||| ||||||||||||||| | | ||||||||    
T  40471107 gcattgactcggtcaaaattgaccaaaatgaccaaagatacaaagaggttaaatcttaaggggctaaaattgtagtttttgtatttatg-gaccaaaatt 40471205  T
Q  369 gcaagttttttaaagtt-agggtggaaaaatgcactttaacct 410  Q
    | ||||||||||||||| | || |||||| |||||||||||||    
T  40471206 gtaagttttttaaagttaaagggggaaaagtgcactttaacct 40471248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 457 - 510
Target Start/End: Complemental strand, 13329568 - 13329515
Alignment:
Q  457 tgccaacctagttgcgatatcgttgcttccccttgatgcctcgccaatctcctg 510  Q
    |||||||||||||| |||||||| ||||  |||||||||||| |||||||||||    
T  13329568 tgccaacctagttgagatatcgtcgcttttccttgatgcctcaccaatctcctg 13329515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 456 - 497
Target Start/End: Complemental strand, 28975056 - 28975015
Alignment:
Q  456 gtgccaacctagttgcgatatcgttgcttccccttgatgcct 497  Q
    ||||||||||||||| ||| ||||||||||||||||||||||    
T  28975056 gtgccaacctagttgggatgtcgttgcttccccttgatgcct 28975015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 415 - 508
Target Start/End: Original strand, 29043163 - 29043256
Alignment:
Q  415 ttttctctgagattgatggtataggataggggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatgcctcgccaatctcc 508  Q
    |||| |||||||||| ||| |||||||  || |||| ||| ||||||||||||||  ||| ||||||||||||| |||||| |  |||||||||    
T  29043163 ttttatctgagattggtggcataggatgtggattctgtggggtgccaacctagtttggatgtcgttgcttccccctgatgcttgtccaatctcc 29043256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 414
Target Start/End: Complemental strand, 30569025 - 30568882
Alignment:
Q  271 cattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattg 369  Q
    ||||||||| |||| ||||| | ||||||| ||||  ||||||||  |||| |||||||||  |||||||||||||||||||  || |||  ||||||||    
T  30569025 cattgactg-gtcacaattggccaaaaggaccaaagatgcaaaggggctaaatcttaggggatcaaaattatagtttttgtacctaagagatcaaaattg 30568927  T
Q  370 caagttttttaaagttagggtggaaaaatgcactttaacctaaaa 414  Q
     || ||||| ||| |||| | || ||| ||||||||| |||||||    
T  30568926 taactttttgaaacttagagggggaaagtgcactttagcctaaaa 30568882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 397
Target Start/End: Complemental strand, 1823728 - 1823565
Alignment:
Q  237 aattagtttattacacgcatggcatgccactcag-cattgactgagtcaaaattgacaaaaaggatcaaaat-tgcaaaggaactaattcttagggggca 334  Q
    ||||| |||||||||| |||||| ||||||  || | |||| | | ||||||||| | ||||||| |||||  |||||| |  |||| ||||||||| |     
T  1823728 aattaatttattacacacatggcctgccacgtaggcgttgaataaatcaaaattggccaaaaggaccaaaaaatgcaaatgggctaaatcttaggggacc 1823629  T
Q  335 -aaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttagggtggaaaaa 397  Q
     ||||| ||||||||||| ||||  || ||||||||||||||||| ||||||| || |||||||    
T  1823628 gaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaa 1823565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 397
Target Start/End: Complemental strand, 1858173 - 1858010
Alignment:
Q  237 aattagtttattacacgcatggcatgccactcag-cattgactgagtcaaaattgacaaaaaggatcaaaat-tgcaaaggaactaattcttagggggca 334  Q
    ||||| |||||||||| |||||| ||||||  || | |||| | | ||||||||| | ||||||| |||||  |||||| |  |||| ||||||||| |     
T  1858173 aattaatttattacacacatggcctgccacgtaggcgttgaataaatcaaaattggccaaaaggaccaaaaaatgcaaatgggctaaatcttaggggacc 1858074  T
Q  335 -aaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttagggtggaaaaa 397  Q
     ||||| ||||||||||| ||||  || ||||||||||||||||| ||||||| || |||||||    
T  1858073 gaaattgtagtttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaa 1858010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 333 - 395
Target Start/End: Original strand, 32207349 - 32207411
Alignment:
Q  333 caaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttagggtggaaa 395  Q
    ||||||| ||||||||||| |||||  | ||||||||||||||||| || ||||||| |||||    
T  32207349 caaaattgtagtttttgtacttagggcgtcaaaattgcaagtttttgaaggttaggggggaaa 32207411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 497
Target Start/End: Original strand, 43856151 - 43856192
Alignment:
Q  456 gtgccaacctagttgcgatatcgttgcttccccttgatgcct 497  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||    
T  43856151 gtgccaacctagttgggatgtcgttacttccccttgatgcct 43856192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 271 - 350
Target Start/End: Original strand, 34625161 - 34625241
Alignment:
Q  271 cattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgt 350  Q
    |||||||| ||||||||||||| |||||||||||| |||| |||    ||| || |||||||| |||||| ||||||||||    
T  34625161 cattgactaagtcaaaattgaccaaaaggatcaaagttgcgaagagggtaaatcatagggggctaaaattgtagtttttgt 34625241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 435 - 515
Target Start/End: Complemental strand, 40263722 - 40263642
Alignment:
Q  435 ataggataggggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatgcctcgccaatctcctgactta 515  Q
    ||||||| ||||||||   | ||||||||||||||| ||| | |||||||| || ||||||||  ||||||||||| ||||    
T  40263722 ataggatgggggttctgcagggtgccaacctagttgggatgttgttgcttcaccctgatgcctgtccaatctcctggctta 40263642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 3e-31; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 281 - 419
Target Start/End: Original strand, 45149941 - 45150081
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggg--gcaaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    |||||||||| | ||||||||||||  ||||||||  |||| |||||||||  |||||||| | ||||||||| ||| | ||||||||||||||||||||    
T  45149941 gtcaaaattggccaaaaggatcaaagatgcaaaggggctaaatcttagggggggcaaaattgttgtttttgtacttaaggggccaaaattgcaagttttt 45150040  T
Q  379 taaagttagggtggaaaaatgcactttaacctaaaattttc 419  Q
     |||||||||| |||||| ||||||||||||||||||||||    
T  45150041 gaaagttaggggggaaaagtgcactttaacctaaaattttc 45150081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 280 - 411
Target Start/End: Complemental strand, 50680462 - 50680330
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||||| ||||||||||||  ||||||||   ||| ||||||||| | ||||||||||||||| || ||||| ||||||||||||||||||||    
T  50680462 agtcaaaattgaccaaaaggatcaaagatgcaaaggggttaaatcttaggggactaaaattatagtttttatacttagggggccaaaattgcaagttttt 50680363  T
Q  379 taaagttagggtggaaaaatgcactttaaccta 411  Q
      |||||| || |||||||||||||||||||||    
T  50680362 ggaagttaagggggaaaaatgcactttaaccta 50680330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 247 - 414
Target Start/End: Complemental strand, 24422965 - 24422795
Alignment:
Q  247 ttacacgcatggcatgccactcag-cattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagt 344  Q
    |||||| | ||||||||||| ||| | ||||||  |||||||||||| |||||||||||| |||||| ||  |||| ||||||||||| |||||| ||||    
T  24422965 ttacacacgtggcatgccacacaggcgttgactatgtcaaaattgaccaaaaggatcaaatttgcaatggggctaaatcttagggggccaaaattgtagt 24422866  T
Q  345 ttttgtatttaggaggccaaaattgcaagttttttaaagtt-agggtggaaaaatgcactttaacctaaaa 414  Q
    ||||||| ||||| || ||||||||||||||||| |||||| |||| | |||| ||||||||| |||||||    
T  24422865 ttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggtaaaagtgcactttagcctaaaa 24422795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 410 - 516
Target Start/End: Complemental strand, 33064911 - 33064805
Alignment:
Q  410 taaaattttctctgagattgatggtataggataggggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatgcctcgccaatctcct 509  Q
    ||||||||||||||||||||  |||||||||| ||||||||  || ||||||||||||||| ||| ||||||||||||||||||||||  ||||||||||    
T  33064911 taaaattttctctgagattggcggtataggatgggggttctgcggggtgccaacctagttgggatgtcgttgcttccccttgatgcctgtccaatctcct 33064812  T
Q  510 gacttag 516  Q
    | |||||    
T  33064811 ggcttag 33064805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 280 - 411
Target Start/End: Complemental strand, 43058916 - 43058784
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||||| ||||||||||||  || |||||  |||| |||||| |||| |||||| ||||||||||| ||||| || |||||||||||||||||    
T  43058916 agtcaaaattgaccaaaaggatcaaagatgtaaaggggctaaatcttagagggctaaaattgtagtttttgtacttagggggtcaaaattgcaagttttt 43058817  T
Q  379 taaagttagggtggaaaaatgcactttaaccta 411  Q
     |||||||||| | |||| || |||||||||||    
T  43058816 caaagttagggggaaaaagtgtactttaaccta 43058784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 281 - 410
Target Start/End: Original strand, 24426046 - 24426177
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||||| ||||| |||||| |||||| ||  |||| ||||||||| | |||||| ||||||||||| ||||| ||||||||||||||||||||     
T  24426046 gtcaaaattgaccaaaagtatcaaatttgcaatggggctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaattgcaagtttttg 24426145  T
Q  380 aaagttag-ggtggaaaaatgcactttaacct 410  Q
    |||||||| || || ||| |||||||||||||    
T  24426146 aaagttagaggggggaaagtgcactttaacct 24426177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 281 - 406
Target Start/End: Original strand, 39699738 - 39699864
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||||| |||||||| ||| |||||| ||  |||| ||||||||||| |||||| |||||| |||| ||||| || |||||||||||||| ||     
T  39699738 gtcaaaattgaccaaaaggattaaagttgcaatggggctaaatcttagggggccaaaattgtagtttctgtacttagggggtcaaaattgcaagttattg 39699837  T
Q  380 aaagttagggtggaaaaatgcacttta 406  Q
    |||||||||| |||||| |||||||||    
T  39699838 aaagttaggggggaaaagtgcacttta 39699864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 247 - 406
Target Start/End: Complemental strand, 52275133 - 52274971
Alignment:
Q  247 ttacacgcatggcatgccactcag-cattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagt 344  Q
    |||||| | ||||||||||| ||| | ||||||  |||||||||||| |||||||||||| |||||| |   |||| ||||||||| | |||||| ||||    
T  52275133 ttacacacttggcatgccacgcaggcgttgactatgtcaaaattgaccaaaaggatcaaatttgcaatgaggctaaatcttaggggcccaaaattgtagt 52275034  T
Q  345 ttttgtatttaggaggccaaaattgcaagttttttaaagttagggtgg-aaaaatgcacttta 406  Q
    ||||||| ||||| || ||||||||||||||||| |||||||||| || |||| |||||||||    
T  52275033 ttttgtacttagggggtcaaaattgcaagtttttgaaagttaggggggtaaaagtgcacttta 52274971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 406
Target Start/End: Original strand, 36613874 - 36614002
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||||  |||||||  ||| ||||||||   |||| |||||||||| ||||||| ||||||||||| ||||| |||||||||| |||||||||    
T  36613874 agtcaaaattgatcaaaaggactaaagttgcaaagaggctaaatcttagggggtcaaaattgtagtttttgtacttagggggccaaaattacaagttttt 36613973  T
Q  379 taaagtta-gggtggaaaaatgcacttta 406  Q
     ||||||| ||| ||||||||||||||||    
T  36613974 aaaagttaggggaggaaaaatgcacttta 36614002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 414
Target Start/End: Original strand, 11437144 - 11437305
Alignment:
Q  256 tggcatgccactca-gcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatt 353  Q
    |||||||||||| | || ||||||  |||||||||||| ||||||||||||  || ||| |   ||| ||||||||||| |||||| ||||||||||| |    
T  11437144 tggcatgccacttaagcgttgactcggtcaaaattgaccaaaaggatcaaagatgtaaaagggttaaatcttagggggccaaaattgtagtttttgtact 11437243  T
Q  354 taggaggccaaaattgcaagttttttaaagttagggtggaaaaa-tgcactttaacctaaaa 414  Q
    || | | |||||||||||||||||| ||||||| || ||||||| ||||||||| |||||||    
T  11437244 taagggaccaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagcctaaaa 11437305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 267 - 415
Target Start/End: Complemental strand, 41364972 - 41364823
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaa 365  Q
    ||||| ||||||  |||||||||||  |||| || |||| |||||| ||  |||| |||||||||| | ||||| | ||||| ||||||||| |||||||    
T  41364972 tcagcgttgactaggtcaaaattgatcaaaatgaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtatttagggggccaaa 41364873  T
Q  366 attgcaagttttttaaagttagggtggaaaaatgcactttaacctaaaat 415  Q
    ||||||||||||| ||||||||||  ||||| ||||||||| || |||||    
T  41364872 attgcaagtttttgaaagttaggggagaaaagtgcactttagccaaaaat 41364823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 247 - 411
Target Start/End: Complemental strand, 14999445 - 14999283
Alignment:
Q  247 ttacacgcatggcatgccactcag-cattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagt 344  Q
    |||||| |||||||||||||  || ||||||| | ||||||||||||||||||||||||| ||||| | || |||| |   || ||  ||||||| ||||    
T  14999445 ttacacacatggcatgccacgtaggcattgaccg-gtcaaaattgacaaaaaggatcaaagttgcagatgagctaaat---agaggatcaaaattgtagt 14999350  T
Q  345 ttttgtatttaggaggccaaaattgcaagttttttaaagttagggtggaaaaatgcactttaaccta 411  Q
    ||||||| ||||| || ||||||||||||||||| |||||||||| |||||| | ||||||| ||||    
T  14999349 ttttgtacttagggggtcaaaattgcaagtttttgaaagttaggggggaaaagtacactttagccta 14999283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 333 - 412
Target Start/End: Original strand, 23980490 - 23980570
Alignment:
Q  333 caaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttag-ggtggaaaaatgcactttaacctaa 412  Q
    ||||||||||||||||||| |||||  |||||||||||||||||||||||||||| || |||||| ||||||||| |||||    
T  23980490 caaaattatagtttttgtacttagggagccaaaattgcaagttttttaaagttagagggggaaaagtgcactttagcctaa 23980570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 246 - 413
Target Start/End: Original strand, 35595127 - 35595298
Alignment:
Q  246 attacacgcatggcatgccac-tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaaaatt-atag 343  Q
    ||||||| | ||||||||||  ||||||||||||  |||||||||||| ||||||| ||||  ||||||||  |||| ||||||||| |||||||  |||    
T  35595127 attacacacgtggcatgccaaatcagcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttaggggccaaaattgttag 35595226  T
Q  344 tttttgtatttaggaggccaaaattgc-aagttttttaaagttag-ggtggaaaaatgcactttaacctaaa 413  Q
    ||||| ||  |||| || ||||||||| ||||||||||||||||| || |||||| | ||||||| ||||||    
T  35595227 tttttatacatagggggtcaaaattgctaagttttttaaagttagagggggaaaagtacactttagcctaaa 35595298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 246 - 410
Target Start/End: Original strand, 39153052 - 39153218
Alignment:
Q  246 attacacgcatggcatgccactcag-cattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatag 343  Q
    ||||||| | |||||||||||  || ||||||||| |||||||||||| ||||||| ||||  ||||||||   ||| |||||| ||| ||||||| |||    
T  39153052 attacacacgtggcatgccacgtaggcattgactg-gtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtag 39153150  T
Q  344 tttttgtatttaggaggccaaaattgcaagttttttaaagttagggtggaaaaa-tgcactttaacct 410  Q
    ||||||||  || | |||||||||||||||||||| ||| ||| || ||||||| |||||||||||||    
T  39153151 tttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcactttaacct 39153218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 247 - 411
Target Start/End: Original strand, 52276099 - 52276266
Alignment:
Q  247 ttacacgcatggcatgccactca-gcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaaaatt-atagt 344  Q
    |||||||| ||||||||||  || || ||||||  |||||||||||  |||||||||||| |||||| ||  |||| ||||||||| | ||||| |||||    
T  52276099 ttacacgcgtggcatgccatgcaagcgttgactaggtcaaaattgatcaaaaggatcaaatttgcaatggggctaaatcttaggggactaaatttatagt 52276198  T
Q  345 ttttgtatttaggaggccaaaattgcaagttttttaaagttag-ggtggaaaaatgcactttaaccta 411  Q
    ||||||| ||||| |||||||||| ||| ||||| ||||||||  | || ||| ||||||||||||||    
T  52276199 ttttgtacttagggggccaaaattacaaatttttgaaagttagaagggggaaagtgcactttaaccta 52276266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 281 - 406
Target Start/End: Complemental strand, 39698692 - 39698566
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaaaattatagtttttgtatttaggaggccaaaattgcaagtttttta 380  Q
    |||||||||||| |||||||| ||| |||||| |   |||| |||||| || |||||||||||||| |||| ||||| ||||||||||| |||||||| |    
T  39698692 gtcaaaattgaccaaaaggattaaagttgcaacgaggctaaatcttagtggccaaaattatagtttctgtacttagggggccaaaattgaaagtttttaa 39698593  T
Q  381 aagtt-agggtggaaaaatgcacttta 406  Q
    ||||| |||| || ||| |||||||||    
T  39698592 aagttaaggggggtaaagtgcacttta 39698566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 281 - 397
Target Start/End: Original strand, 14999926 - 15000043
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagg-gggcaaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    ||||||||||||||||||||||||| ||||||| | ||||| | ||||| || ||  ||| ||| ||||||| ||||| |  |||||||||||||||||     
T  14999926 gtcaaaattgacaaaaaggatcaaagttgcaaatggactaaattttaggtggtcatgattgtagattttgtacttaggggatcaaaattgcaagttttta 15000025  T
Q  380 aaagttagggtggaaaaa 397  Q
    |||||||||| |||||||    
T  15000026 aaagttagggaggaaaaa 15000043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 270 - 406
Target Start/End: Original strand, 45157170 - 45157306
Alignment:
Q  270 gcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaatt 368  Q
    |||||||||| |||||||||||| ||||||| ||||  ||||||||   ||| |||||  ||| ||||||| |||||||||||  |||| ||||||||||    
T  45157170 gcattgactg-gtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagggtcaaaattgtagtttttgtacatagggggccaaaatt 45157268  T
Q  369 gcaagttttttaaagttagggtggaaaaatgcacttta 406  Q
    |||||||||| ||| |||||| || ||| |||||||||    
T  45157269 gcaagtttttgaaacttagggggggaaagtgcacttta 45157306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 267 - 406
Target Start/End: Complemental strand, 51684510 - 51684369
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaa 365  Q
    ||||| ||||||  |||||||||| | ||||||| ||||  ||||||||  |||| ||||||||||| |||||| |||||||| ||  |||| |||||||    
T  51684510 tcagcgttgacttggtcaaaattggccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgtagtttttatacatagggggccaaa 51684411  T
Q  366 attgcaagttttttaaagtt-agggtggaaaaatgcacttta 406  Q
    ||||||| ||||| |||||| |||| |||||| |||||||||    
T  51684410 attgcaactttttaaaagttaaggggggaaaagtgcacttta 51684369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 280 - 406
Target Start/End: Complemental strand, 35594346 - 35594220
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    ||||||||||| | ||||||| ||||  ||||||||  |||| | ||||||| ||||||| |||||||  || ||||| || |||||||||||||||||     
T  35594346 agtcaaaattggctaaaaggaccaaagatgcaaaggggctaaattttaggggtcaaaattgtagttttaatacttagg-ggtcaaaattgcaagtttttg 35594248  T
Q  380 aaagtta-gggtggaaaaatgcacttta 406  Q
    ||||||| |||||||||| |||||||||    
T  35594247 aaagttaggggtggaaaagtgcacttta 35594220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 280 - 410
Target Start/End: Original strand, 37526848 - 37526979
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    ||||||||||||  |||| || ||||  ||||||||  |||| ||||||||| ||||||| | |||| | ||||||||  |||||||||||||||||||     
T  37526848 agtcaaaattgatcaaaaagaccaaagatgcaaaggggctaaatcttaggggccaaaattgtggtttctatatttagggagccaaaattgcaagtttttg 37526947  T
Q  380 aaagtt-agggtggaaaaatgcactttaacct 410  Q
    |||||| |||| |||||| | |||||||||||    
T  37526948 aaagttaaggggggaaaagtacactttaacct 37526979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 415 - 516
Target Start/End: Original strand, 41917070 - 41917172
Alignment:
Q  415 ttttctctgagattgatggtataggataggggttctttggtgtgccaacctagttgcgatatcgttgctt-ccccttgatgcctcgccaatctcctgact 513  Q
    |||| ||||||||||| || ||||||| ||||||||  || ||||||||||||||| ||| | ||||||| |||||||||||||  ||||||||||| ||    
T  41917070 ttttatctgagattgacggcataggatgggggttctccggggtgccaacctagttgggatgttgttgcttcccccttgatgcctgtccaatctcctggct 41917169  T
Q  514 tag 516  Q
    |||    
T  41917170 tag 41917172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 413
Target Start/End: Complemental strand, 39152071 - 39151927
Alignment:
Q  270 gcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaatt 368  Q
    |||||||||| |||||||||||| ||||||| ||||  ||||||||   ||| |||||  | | ||||||| |||||||||||  |||| ||||||||||    
T  39152071 gcattgactg-gtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagagtcaaaattgtagtttttgtacatagggggccaaaatt 39151973  T
Q  369 gcaagttttttaaagtt-agggtggaaaaatgcactttaacctaaa 413  Q
     ||||||||| ||| || |||| | |||||||||||||||||||||    
T  39151972 acaagtttttgaaacttaagggggaaaaaatgcactttaacctaaa 39151927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 415
Target Start/End: Original strand, 51685739 - 51685872
Alignment:
Q  284 aaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaa 382  Q
    ||||||| | ||||||| ||||  ||||||||  |||| |||||||||| ||||||| |||||||||||  |||  ||||||||| |||| ||||| |||    
T  51685739 aaaattggccaaaaggaccaaagatgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacatagagggccaaaatcgcaactttttgaaa 51685838  T
Q  383 gttag-ggtggaaaaatgcactttaacctaaaat 415  Q
    ||||| || |||||| ||||||||| ||||||||    
T  51685839 gttagagggggaaaagtgcactttagcctaaaat 51685872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 267 - 414
Target Start/End: Original strand, 52828027 - 52828176
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaa 365  Q
    ||||| ||||||  ||||||||||   ||||||| |||| |||||| ||  |||| |||||||||| | ||||| | ||||| ||| |||||  ||||||    
T  52828027 tcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggagccaaa 52828126  T
Q  366 attgcaagttttttaaagttag-ggtggaaaaatgcactttaacctaaaa 414  Q
    ||||||||||||| ||| |||| || |||||| |||||||||||||||||    
T  52828127 attgcaagtttttgaaaattagagggggaaaagtgcactttaacctaaaa 52828176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 284 - 406
Target Start/End: Complemental strand, 36612979 - 36612856
Alignment:
Q  284 aaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaa 382  Q
    ||||||||| |||| || ||||  |||||||| ||||| ||||||||||  |||||| ||||||||||| ||| ||  |||||||||||| ||||| |||    
T  36612979 aaaattgaccaaaatgaccaaagatgcaaagggactaaatcttagggggttaaaattgtagtttttgtacttaagat-ccaaaattgcaaatttttgaaa 36612881  T
Q  383 gtt-agggtggaaaaatgcacttta 406  Q
    ||| |||| ||||||||||||||||    
T  36612880 gttaaggggggaaaaatgcacttta 36612856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 386
Target Start/End: Original strand, 7675457 - 7675536
Alignment:
Q  308 tgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagtta 386  Q
    ||||||||  |||| |||||||||| |||||||||| ||||| || |||||||| ||||||||||||||||| |||||||    
T  7675457 tgcaaaggggctaaatcttagggggtcaaaattataatttttttacttaggagggcaaaattgcaagtttttgaaagtta 7675536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 411
Target Start/End: Complemental strand, 7983179 - 7983048
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||||| |||||||| ||| |||||| ||   ||| |||||||||| ||||||| | |||||  ||  |||| ||||||||||||||||| ||     
T  7983179 gtcaaaattgaccaaaaggatgaaatttgcaatggggataaatcttaggggggcaaaattgtggttttgatacatagggggccaaaattgcaagttgttg 7983080  T
Q  380 aaagttagggtggaaaaatgcactttaaccta 411  Q
    ||||||| ||  ||||| ||||||||||||||    
T  7983079 aaagttacgggagaaaagtgcactttaaccta 7983048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 375
Target Start/End: Original strand, 44411937 - 44412032
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattctt-agggggcaaaattatagtttttgtatttaggaggccaaaattgcaagtt 375  Q
    |||||||||| |||||||||||||| |||||||||  |||| |||| | |||| |||||| ||||||||||| ||||| | | |||||||||||||    
T  44411937 gtcaaaattggcaaaaaggatcaaagttgcaaagggcctaaatcttaaaggggtaaaattgtagtttttgtacttaggggactaaaattgcaagtt 44412032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 406
Target Start/End: Complemental strand, 45148710 - 45148584
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||| | ||||||| ||||  ||||||||   ||| |||||||||| ||||||| |||||||| || ||||| ||||||||||||||||||||     
T  45148710 gtcaaaattggccaaaaggaccaaagatgcaaaggggttaaatcttaggggggcaaaattgtagttttt-tacttagggggccaaaattgcaagtttttg 45148612  T
Q  380 aaagttagggtggaaaaa-tgcacttta 406  Q
    ||||||| |  ||||||| |||||||||    
T  45148611 aaagttaagcgggaaaaagtgcacttta 45148584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 333 - 411
Target Start/End: Complemental strand, 7674603 - 7674526
Alignment:
Q  333 caaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttagggtggaaaaatgcactttaaccta 411  Q
    ||||||| ||||||||||| ||||| | |||||||||||||||||| |||||||||| ||||||  |||||||| ||||    
T  7674603 caaaattgtagtttttgtacttagg-gcccaaaattgcaagtttttaaaagttaggggggaaaagggcactttagccta 7674526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 256 - 406
Target Start/End: Complemental strand, 11436198 - 11436045
Alignment:
Q  256 tggcatgccactcag-cattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatt 353  Q
    |||||||||||| || | ||||||  |||||||||||| ||||| | ||||  |||||| |   ||| ||||||||||| |||||| |||||||| || |    
T  11436198 tggcatgccacttaggcgttgactcggtcaaaattgaccaaaagaaccaaagatgcaaatgggttaaatcttagggggccaaaattgtagtttttatact 11436099  T
Q  354 taggaggccaaaattgcaagttttttaaagtt-agggtggaaaaatgcacttta 406  Q
    ||  ||||||||||||||||||||| |||||| | || |||||| |||||||||    
T  11436098 taaaaggccaaaattgcaagtttttgaaagttaaagggggaaaagtgcacttta 11436045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 410 - 515
Target Start/End: Complemental strand, 21487927 - 21487822
Alignment:
Q  410 taaaattttctctgagattgatggtataggataggggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatgcctcgccaatctcct 509  Q
    |||| ||||||||||| |||  || ||||||| ||||||||| || ||||||||||||||| ||| ||||  ||||| ||||||||||  ||| ||||||    
T  21487927 taaatttttctctgagtttggcggcataggatgggggttcttcggggtgccaacctagttgggatgtcgtcacttcctcttgatgcctgtccactctcct 21487828  T
Q  510 gactta 515  Q
    | ||||    
T  21487827 ggctta 21487822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 280 - 415
Target Start/End: Original strand, 43059976 - 43060113
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||||| ||||||| ||||  |||||| || |||| ||||| |||| ||||||| ||||||||||| ||| | || ||||||| ||| |||||    
T  43059976 agtcaaaattgaccaaaaggaccaaagatgcaaatgagctaaatcttaaggggtcaaaattgtagtttttgtacttaaggggtcaaaatttcaaattttt 43060075  T
Q  379 taaagttag-ggtggaaaaatgcactttaacctaaaat 415  Q
     |||||||| || || ||| | ||||||| ||||||||    
T  43060076 gaaagttagagggggtaaagtacactttagcctaaaat 43060113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 445 - 516
Target Start/End: Original strand, 19274265 - 19274336
Alignment:
Q  445 ggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatgcctcgccaatctcctgacttag 516  Q
    ||||||| || ||||||||||||||| ||  |||| |||| ||||||||||||| ||||||||||| |||||    
T  19274265 ggttcttcggggtgccaacctagttgggaattcgtcgcttgcccttgatgcctcaccaatctcctggcttag 19274336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 411
Target Start/End: Original strand, 35066971 - 35067105
Alignment:
Q  279 gagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagtttt 377  Q
    |||||||||||||| |||||||  |  ||||||||||  |||| | |||||||| ||||||| ||||||||||   |||| ||||||||| |||| ||||    
T  35066971 gagtcaaaattgaccaaaaggactattattgcaaaggggctaaatattagggggccaaaattgtagtttttgttcatagggggccaaaatcgcaactttt 35067070  T
Q  378 ttaaagtt-agggtggaaaaatgcactttaaccta 411  Q
    | ||| || |||| |||||| ||||||||| ||||    
T  35067071 tgaaacttaaggggggaaaagtgcactttagccta 35067105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 410
Target Start/End: Original strand, 43378684 - 43378814
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||| ||| |||||||| |||  ||||||||  |||| ||||||| || ||||||| || |||||||| ||||| |  |||||||| ||||||||     
T  43378684 gtcaaaatcgaccaaaaggattaaagatgcaaaggtgctaaatcttaggtggtcaaaattgtaatttttgtacttaggggatcaaaattgtaagtttttg 43378783  T
Q  380 aaagttagggtggaaaaatgcactttaacct 410  Q
    ||||||| |   ||||| |||||||||||||    
T  43378784 aaagttaagagagaaaagtgcactttaacct 43378814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 386
Target Start/End: Complemental strand, 44404524 - 44404466
Alignment:
Q  328 gggggcaaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagtta 386  Q
    |||| ||||||||||||||||||| ||||| ||| |||||||| ||||||| |||||||    
T  44404524 ggggccaaaattatagtttttgtacttagggggctaaaattgctagtttttgaaagtta 44404466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 314
Target Start/End: Complemental strand, 2940422 - 2940362
Alignment:
Q  254 catggcatgccactcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaag 314  Q
    |||| ||||||||| ||| ||||||  ||||||||| || |||||||||||||||||||||    
T  2940422 catgccatgccactaagcgttgacttggtcaaaattaactaaaaggatcaaaattgcaaag 2940362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 494
Target Start/End: Original strand, 17122816 - 17122900
Alignment:
Q  410 taaaattttctctgagattgatggtataggataggggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatg 494  Q
    ||||||||| |||||| |||  || |||||||  |||||||  || ||||||||||||||| ||| |||||||||| ||||||||    
T  17122816 taaaattttttctgagtttggcggcataggatgagggttctgcggggtgccaacctagttgggatgtcgttgcttctccttgatg 17122900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 372
Target Start/End: Original strand, 46525772 - 46525862
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaaaattatagtttttgtatttaggaggccaaaattgcaa 372  Q
    |||||||||||| ||||| |||| |||||||||||  |||| ||||||||||| ||||| |  ||||| |  ||||||||||||||| ||||    
T  46525772 gtcaaaattgaccaaaag-atcacaattgcaaaggggctaaatcttagggggccaaattttcattttttttattaggaggccaaaatcgcaa 46525862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 406
Target Start/End: Complemental strand, 52827477 - 52827350
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggca-aaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    ||||||||||   ||||||| |||| |||||| ||  |||| ||||||||||   ||||| | ||||| ||| ||||| || |||||||||||||||||     
T  52827477 gtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttg 52827378  T
Q  380 aaagtta-gggtggaaaaatgcacttta 406  Q
    ||||||| ||| |||||| |||||||||    
T  52827377 aaagttagggggggaaaagtgcacttta 52827350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 302 - 387
Target Start/End: Original strand, 33088609 - 33088695
Alignment:
Q  302 caaaattgcaaaggaactaattcttaggg-ggcaaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttag 387  Q
    |||| |||||||||  |||| |||||||| ||||||||| ||||||||||| |||   || ||||||||||||||||| || |||||    
T  33088609 caaagttgcaaaggggctaaatcttagggaggcaaaattgtagtttttgtacttaaagggtcaaaattgcaagtttttgaatgttag 33088695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 386
Target Start/End: Original strand, 39222505 - 39222550
Alignment:
Q  341 tagtttttgtatttaggaggccaaaattgcaagttttttaaagtta 386  Q
    |||||||| || ||||| |||||||||||||||||||| |||||||    
T  39222505 tagtttttatacttagggggccaaaattgcaagtttttgaaagtta 39222550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 406
Target Start/End: Original strand, 41366115 - 41366228
Alignment:
Q  294 aaaaggatcaaaattgcaaaggaactaattcttagggggcaaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttagg-gtgg 392  Q
    ||||||| |||| |||||| ||  |||| ||||||||||| ||||| | |||||  || ||| | ||| ||||||||| |||||| ||||||||| | ||    
T  41366115 aaaaggaccaaagttgcaatggggctaaatcttagggggctaaattgtggttttgatacttaaggggctaaaattgcatgtttttgaaagttaggagggg 41366214  T
Q  393 aaaaatgcacttta 406  Q
    |||| |||||||||    
T  41366215 aaaagtgcacttta 41366228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 4e-30; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 281 - 411
Target Start/End: Original strand, 7268798 - 7268929
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||||  |||||||| |||||||||| || ||||| ||||||| ||| |||||| |||||| | || ||||||||||||||||||||||||||     
T  7268798 gtcaaaattgatcaaaaggattaaaattgcaatgggactaaatcttaggaggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttg 7268897  T
Q  380 aaagttagggtggaaaaatgcactttaaccta 411  Q
    |||||||||| |||||| ||||||||||||||    
T  7268898 aaagttaggggggaaaagtgcactttaaccta 7268929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 280 - 406
Target Start/End: Complemental strand, 54539886 - 54539758
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||| |||||||||||||| ||||||| || |||| |||||||||  ||||||| ||||||||||||||||| ||  ||||||||||||||||    
T  54539886 agtcaaaattggcaaaaaggatcaaagttgcaaatgagctaaatcttaggggatcaaaattgtagtttttgtatttagggggttaaaattgcaagttttt 54539787  T
Q  379 taaagtt-agggtggaaaaatgcacttta 406  Q
     |||||| ||||||||||| |||||||||    
T  54539786 gaaagttaagggtggaaaagtgcacttta 54539758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 281 - 406
Target Start/End: Original strand, 54540761 - 54540888
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    ||||||||||||||||||||||||| |||||||||  |||| |||||||||| ||||||| ||||||||||| ||| | || |||||||||||||||||     
T  54540761 gtcaaaattgacaaaaaggatcaaagttgcaaaggggctaaatcttagggggccaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttg 54540860  T
Q  380 aaagtt-agggtggaaaaatgcacttta 406  Q
    |||||| |||| |||||| |||||||||    
T  54540861 aaagttaaggggggaaaagtgcacttta 54540888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 281 - 414
Target Start/End: Complemental strand, 7267773 - 7267639
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||||| |||||||| ||| |||||| |   |||| ||||||||||| |||||| |||||| |||| ||||| ||||||||||||||||||||     
T  7267773 gtcaaaattgaccaaaaggattaaagttgcaatgaggctaaatcttagggggccaaaattgtagtttctgtacttagggggccaaaattgcaagtttttg 7267674  T
Q  380 aaagttagggtggaaaaatgcactttaacctaaaa 414  Q
    ||||||| || |||||| |||||||||||||||||    
T  7267673 aaagttaagggggaaaagtgcactttaacctaaaa 7267639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 247 - 406
Target Start/End: Complemental strand, 8456642 - 8456481
Alignment:
Q  247 ttacacgcatggcatgccactcag-cattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagt 344  Q
    |||||| | ||||||||||| ||| | ||||||  |||||||||||| |||||||||||| |||||| |   |||| ||||||||||| |||||| ||||    
T  8456642 ttacacacgtggcatgccacgcaggcgttgactaggtcaaaattgactaaaaggatcaaatttgcaatgaggctaaatcttagggggccaaaattgtagt 8456543  T
Q  345 ttttgtatttaggaggccaaaattgcaagttttttaaagttagggtggaaaaatgcacttta 406  Q
    ||||||||||||| | |||||||||||||||||| ||| |||||| | |||| |||||||||    
T  8456542 ttttgtatttaggggaccaaaattgcaagtttttgaaaattagggggaaaaagtgcacttta 8456481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 273 - 416
Target Start/End: Complemental strand, 29931364 - 29931219
Alignment:
Q  273 ttgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgca 371  Q
    ||||||| |||||||||||| |||||||  |  ||||||||||   ||| ||||||||||| |||||| ||||||||||||||||| ||| |||||||||    
T  29931364 ttgactgtgtcaaaattgaccaaaaggactattattgcaaaggggttaaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgca 29931265  T
Q  372 agttttttaaagtta-gggtggaaaaatgcactttaacctaaaatt 416  Q
    ||||||| ||||||| |||||||||| ||||||||| |||| ||||    
T  29931264 agtttttgaaagttaggggtggaaaagtgcactttagcctataatt 29931219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 273 - 416
Target Start/End: Complemental strand, 29980518 - 29980373
Alignment:
Q  273 ttgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgca 371  Q
    ||||||| |||||||||||| |||||||  |  ||||||||||   ||| ||||||||||| |||||| ||||||||||||||||| ||| |||||||||    
T  29980518 ttgactgtgtcaaaattgaccaaaaggactattattgcaaaggggttaaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgca 29980419  T
Q  372 agttttttaaagtta-gggtggaaaaatgcactttaacctaaaatt 416  Q
    ||||||| ||||||| |||||||||| ||||||||| |||| ||||    
T  29980418 agtttttgaaagttaggggtggaaaagtgcactttagcctataatt 29980373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 282 - 406
Target Start/End: Original strand, 55191967 - 55192092
Alignment:
Q  282 tcaaaattgacaaaaaggatcaaaattgcaaaggaactaattctt-agggggcaaaattatagtttttgtatttaggaggccaaaattgcaagtttttta 380  Q
    |||||||||||||||| |||||||||||||||||   |||||||| ||||| ||||||| ||||||||||| ||||  |||||||||||||||||||| |    
T  55191967 tcaaaattgacaaaaatgatcaaaattgcaaaggggttaattcttgaggggccaaaattgtagtttttgtacttagagggccaaaattgcaagtttttga 55192066  T
Q  381 aagttagggtggaaaaatgcacttta 406  Q
    |||||| || || ||||| |||||||    
T  55192067 aagttaaggggggaaaatacacttta 55192092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 256 - 413
Target Start/End: Complemental strand, 7758558 - 7758398
Alignment:
Q  256 tggcatgccactca-gcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaaaa-ttatagtttttgtatt 353  Q
    |||||||||||| | || ||||||  |||||||||||| ||||||| ||||  | ||||||   ||| ||||||||||||||| || ||||||||||| |    
T  7758558 tggcatgccacttaagcgttgactaggtcaaaattgaccaaaaggaccaaagatacaaaggggttaaatcttagggggcaaaaattgtagtttttgtact 7758459  T
Q  354 taggaggccaaaattgcaagttttttaaagttagggtggaaaaa-tgcactttaacctaaa 413  Q
    |||| || ||||||||||||||||| ||||||| || ||||||| ||||||||| ||||||    
T  7758458 tagggggtcaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagcctaaa 7758398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 415
Target Start/End: Complemental strand, 12700304 - 12700169
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||||| ||||||| ||||  ||||| |   |||| || ||||||| ||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  12700304 agtcaaaattgaccaaaaggaccaaagatgcaatgtggctaaatcatagggggtcaaaattgtagtttttgtacttagggggccaaaattgcaagttttt 12700205  T
Q  379 taaagttagggtggaaaaatgcactttaacctaaaat 415  Q
     |||||||||| || ||| ||||||||| ||||||||    
T  12700204 gaaagttaggg-gggaaagtgcactttagcctaaaat 12700169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 271 - 414
Target Start/End: Original strand, 5029644 - 5029788
Alignment:
Q  271 cattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaaaa-ttatagtttttgtatttaggaggccaaaattg 369  Q
    |||||||||||||||||| ||  |||||||  |||   |||| ||  ||||||||||||||| |||| || | ||||| ||| |||||||||||||||||    
T  5029644 cattgactgagtcaaaatagagcaaaaggacgaaataagcaatggggctaattcttaggggggaaaaattgtggttttggtacttaggaggccaaaattg 5029743  T
Q  370 caagttttttaaagttagggtggaaaaatgcactttaacctaaaa 414  Q
    |||| |||| |||| ||||| |||||| ||||||||| |||||||    
T  5029744 caagattttgaaagataggggggaaaagtgcactttagcctaaaa 5029788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 281 - 411
Target Start/End: Original strand, 22776783 - 22776915
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    ||||||||||  |||| ||| ||||  ||||||||  |||||||||||||||| |||||| |||||||||||  |||| |||||||||||||| ||| |     
T  22776783 gtcaaaattgggaaaatggaccaaatatgcaaaggggctaattcttagggggccaaaattgtagtttttgtacatagggggccaaaattgcaactttctg 22776882  T
Q  380 aaagtta-gggtggaaaaatgcactttaaccta 411  Q
    ||||||| |||||||||| ||||||||| ||||    
T  22776883 aaagttaggggtggaaaagtgcactttagccta 22776915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 273 - 377
Target Start/End: Complemental strand, 55191647 - 55191544
Alignment:
Q  273 ttgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaaaattatagtttttgtatttaggaggccaaaattgcaa 372  Q
    |||||||| |||||| ||| |||||||||||||||||||||||  |||| ||||  | || ||||||||||||||||||||||||  | |||||||||||    
T  55191647 ttgactga-tcaaaagtgataaaaaggatcaaaattgcaaaggggctaaatcttgagagggaaaattatagtttttgtatttagggtgtcaaaattgcaa 55191549  T
Q  373 gtttt 377  Q
    |||||    
T  55191548 gtttt 55191544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 281 - 406
Target Start/End: Original strand, 29932670 - 29932796
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||| | |||||||  |  |||||||||| ||||| ||||| |||| ||||||| ||||||||||| ||||| ||||||||||||||||||||     
T  29932670 gtcaaaattggccaaaaggactattattgcaaagggactaaatcttaaggggtcaaaattgtagtttttgtacttagg-ggccaaaattgcaagtttttg 29932768  T
Q  380 aaagttag-ggtggaaaaatgcacttta 406  Q
    |||||||| || |||||| |||||||||    
T  29932769 aaagttagagggggaaaagtgcacttta 29932796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 281 - 406
Target Start/End: Original strand, 29981824 - 29981950
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||| | |||||||  |  |||||||||| ||||| ||||| |||| ||||||| ||||||||||| ||||| ||||||||||||||||||||     
T  29981824 gtcaaaattggccaaaaggactattattgcaaagggactaaatcttaaggggtcaaaattgtagtttttgtacttagg-ggccaaaattgcaagtttttg 29981922  T
Q  380 aaagttag-ggtggaaaaatgcacttta 406  Q
    |||||||| || |||||| |||||||||    
T  29981923 aaagttagagggggaaaagtgcacttta 29981950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 24516562 - 24516464
Alignment:
Q  309 gcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttagggtggaaaaa-tgcacttt 405  Q
    |||||||| |||| ||||| ||||| |||||| |||||||| || |||||  |||||||||||||||||||||||||||||| ||||||| ||||||||    
T  24516562 gcaaaggagctaaatcttaaggggccaaaattgtagtttttatacttagggtgccaaaattgcaagttttttaaagttaggggggaaaaagtgcacttt 24516464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 267 - 411
Target Start/End: Original strand, 47610537 - 47610683
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaa 365  Q
    ||||| ||||||  ||||||||||   ||||||| |||| |||||| ||  |||| |||||||||| | ||||| | ||||| ||| ||||| |||||||    
T  47610537 tcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaa 47610636  T
Q  366 attgcaagttttttaaagttag-ggtggaaaaatgcactttaaccta 411  Q
    ||||||||||||| |||||||| || |||||| ||||||||||||||    
T  47610637 attgcaagtttttgaaagttagagggggaaaagtgcactttaaccta 47610683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 270 - 411
Target Start/End: Complemental strand, 19984989 - 19984847
Alignment:
Q  270 gcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaatt 368  Q
    |||||||||| |||||||||||| ||||||| ||||  ||||||||   ||| |||||  ||| ||||||| |||||||||||  |||| ||||||||||    
T  19984989 gcattgactg-gtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagggtcaaaattgtagtttttgtacatagggggccaaaatt 19984891  T
Q  369 gcaagttttttaaagtta-gggtggaaaaatgcactttaaccta 411  Q
    |||||||||| ||| ||| ||| |||||| ||||||||| ||||    
T  19984890 gcaagtttttgaaacttagggggggaaaagtgcactttagccta 19984847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 279 - 417
Target Start/End: Complemental strand, 53614950 - 53614811
Alignment:
Q  279 gagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||||||| ||||||     |||||||| |  ||||||||| |||| ||||||| |||||||| ||| |||  | | ||||||| ||||||||    
T  53614950 gagtcaaaattgacataaaggactgctattgcaaatgggctaattcttgggggccaaaattgtagtttttatatatagaggactaaaattgtaagttttt 53614851  T
Q  379 taaagtta-gggtggaaaaatgcactttaacctaaaattt 417  Q
     ||||||| ||| |||||||||||||||| ||||||||||    
T  53614850 gaaagttaagggaggaaaaatgcactttagcctaaaattt 53614811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 282 - 415
Target Start/End: Original strand, 34019117 - 34019250
Alignment:
Q  282 tcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttta 380  Q
    ||||||||||| ||||||| ||||  |||||| || |||| | ||||||| | |||||| |||| ||||||  |||| || ||||||||||||||||| |    
T  34019117 tcaaaattgaccaaaaggaccaaagatgcaaatgagctaaattttaggggaccaaaattgtagtgtttgtacctagggggtcaaaattgcaagtttttga 34019216  T
Q  381 aagttagggtggaaaaatgcactttaacctaaaat 415  Q
    |||||| || ||||||||| |||||| ||||||||    
T  34019217 aagttaagg-ggaaaaatgtactttaccctaaaat 34019250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 267 - 412
Target Start/End: Original strand, 51470412 - 51470558
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggg-gcaaaattatagtttttgtatttaggaggccaaa 365  Q
    ||||| ||||||  |||||||||||  ||||||| |||| |||||| ||| |||| ||||||||| || ||||| | ||||| ||| ||||| |  | ||    
T  51470412 tcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggagctaaatcttaggggtgctaaattgtggttttggtacttaggggatctaa 51470511  T
Q  366 attgcaagttttttaaagttagggtggaaaaatgcactttaacctaa 412  Q
    ||||||||||||| |||||||||| |||| | ||||||||| |||||    
T  51470512 attgcaagtttttgaaagttaggggggaagagtgcactttagcctaa 51470558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 281 - 417
Target Start/End: Original strand, 54986978 - 54987114
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||| | |||| |||||||  ||||||||| |||| |||||| ||| |||||||||||||||| ||  |||| | | ||||| |||| |||||     
T  54986978 gtcaaaattggccaaaatgatcaaagatgcaaaggagctaaatcttagagggtcaaaattatagtttttatacataggggactaaaatcgcaactttttg 54987077  T
Q  380 aaagttagggtggaaaaatgcactttaacctaaaattt 417  Q
    ||| |||||| |||||| ||||||||||||| ||||||    
T  54987078 aaacttaggg-ggaaaagtgcactttaaccttaaattt 54987114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 318 - 412
Target Start/End: Complemental strand, 534592 - 534496
Alignment:
Q  318 ctaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttagggtggaaaaa-tgcactttaacctaa 412  Q
    |||| ||||||||||| |||||| |||||||||||  ||||||| ||||||||||||||||| | |||||| | ||||||| ||||||||| |||||    
T  534592 ctaaatcttagggggccaaaattgtagtttttgtacataggaggtcaaaattgcaagtttttgagagttagaggggaaaaagtgcactttagcctaa 534496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 256 - 406
Target Start/End: Complemental strand, 46720096 - 46719944
Alignment:
Q  256 tggcatgccactcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtattt 354  Q
    |||||||||| ||||| ||||||   ||||||||||| ||||||| ||||  |||||| |  |||| |||||| || | |||||| |||||||| ||  |    
T  46720096 tggcatgccattcagcgttgacttgatcaaaattgaccaaaaggaccaaatatgcaaatgggctaaatcttagaggactaaaattgtagtttttatacat 46719997  T
Q  355 aggaggccaaaattgcaagttttttaaagtt-agggtggaaaaatgcacttta 406  Q
    ||| ||||||||| |||| ||||| |||||| |||| ||||||||||||||||    
T  46719996 agggggccaaaatcgcaactttttaaaagttaaggggggaaaaatgcacttta 46719944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 509
Target Start/End: Original strand, 7164995 - 7165094
Alignment:
Q  410 taaaattttctctgagattgatggtataggataggggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatgcctcgccaatctcct 509  Q
    ||||||||||| ||||||||   |||||||||   ||||||| || |||| |||||||||| ||| || | ||||| |||||||||||||||||||||||    
T  7164995 taaaattttctttgagattggcagtataggatgaaggttcttcggggtgctaacctagttgggatgtcatcgcttcaccttgatgcctcgccaatctcct 7165094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 497
Target Start/End: Original strand, 19185075 - 19185150
Alignment:
Q  422 tgagattgatggtataggataggggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatgcct 497  Q
    |||| ||| ||||||||||| || |||||| || ||||||||||||||| ||| |||||||||| |||||||||||    
T  19185075 tgagtttggtggtataggatgggagttcttcggggtgccaacctagttgggatgtcgttgcttctccttgatgcct 19185150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 246 - 420
Target Start/End: Original strand, 51038725 - 51038902
Alignment:
Q  246 attacacgcatggcatgccac-tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatag 343  Q
    ||||||| | ||||||||||  ||||| ||||||  ||||||||||  |||||||| ||  ||||||||||    |||||||| ||| | |||||| |||    
T  51038725 attacacacgtggcatgccaaatcagcgttgactcggtcaaaattgctaaaaaggaccactattgcaaaggggacaattcttaagggaccaaaattgtag 51038824  T
Q  344 tttttgtatttaggaggccaaaattgcaagttttttaaagtt-agggtggaaaaatgcactttaacctaaaattttct 420  Q
    |||||||   |||| || ||||||||||| ||||| |||||| ||||||||||| ||||||||| |||| | ||||||    
T  51038825 tttttgttcatagggggtcaaaattgcaactttttaaaagttaagggtggaaaagtgcactttagcctatatttttct 51038902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 267 - 406
Target Start/End: Complemental strand, 51470116 - 51469975
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggca-aaattatagtttttgtatttaggaggccaaa 365  Q
    ||||| ||||||  |||||||||||  ||||||| |||| |||||| ||  |||| ||||||||||   ||||| | ||||| ||| ||||| |||||||    
T  51470116 tcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggccaaa 51470017  T
Q  366 attgcaagttttttaaagttaggg-tggaaaaatgcacttta 406  Q
    ||||||||||||| ||| ||||||  |||||| |||||||||    
T  51470016 attgcaagtttttgaaaattagggagggaaaagtgcacttta 51469975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 406
Target Start/End: Complemental strand, 47614316 - 47614188
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    |||||||||| || ||||| | ||||  |||||||   |||| ||||||||||| |||||| | |||||  || ||||| ||||||||||||||||||||    
T  47614316 agtcaaaattaaccaaaagcaccaaagatgcaaagaggctaaatcttagggggccaaaattgttgttttgatacttagggggccaaaattgcaagttttt 47614217  T
Q  379 taaagttagggtggaaaaa-tgcacttta 406  Q
     |||||||| | ||||||| |||||||||    
T  47614216 gaaagttagaggggaaaaagtgcacttta 47614188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 281 - 419
Target Start/End: Complemental strand, 49216377 - 49216237
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||| | |||| |||||||  |||||| || |||| ||||| |||| || |||| |||||||||||  |||| || ||||||||||| |||||     
T  49216377 gtcaaaattggccaaaatgatcaaagatgcaaatgagctaaatcttaaggggacataattgtagtttttgtacatagggggtcaaaattgcaactttttg 49216278  T
Q  380 aaagttagg-gtggaaaaatgcactttaacctaaaattttc 419  Q
    ||| ||||| |||||||| ||||||||| || |||| ||||    
T  49216277 aaacttaggcgtggaaaagtgcactttagccaaaaaatttc 49216237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 412
Target Start/End: Original strand, 11671373 - 11671444
Alignment:
Q  341 tagtttttgtatttaggaggccaaaattgcaagttttttaaagttagggtggaaaaatgcactttaacctaa 412  Q
    |||||||| |||||||| ||| |||||||||||||||| |||||||||  | |||| ||||||||| |||||    
T  11671373 tagtttttatatttagggggctaaaattgcaagtttttgaaagttaggcggaaaaagtgcactttagcctaa 11671444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 386
Target Start/End: Complemental strand, 4271570 - 4271464
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    ||||||||||||||||||||||||| ||||||| |  |||| ||||| |  || |||||| |||||||| |||||| |||  ||||||| ||| |||||     
T  4271570 gtcaaaattgacaaaaaggatcaaagttgcaaatgggctaaatcttaagatgctaaaattgtagtttttatatttaagagatcaaaattacaaatttttg 4271471  T
Q  380 aaagtta 386  Q
    |||||||    
T  4271470 aaagtta 4271464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 406
Target Start/End: Original strand, 12703519 - 12703597
Alignment:
Q  328 gggggcaaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttagggtggaaaaatgcacttta 406  Q
    |||| ||||||| ||||||||||| ||||| |||||||||| ||| ||||| |||||||| | | |||| |||||||||    
T  12703519 ggggccaaaattgtagtttttgtacttagggggccaaaattacaaatttttgaaagttagagggaaaaagtgcacttta 12703597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 406
Target Start/End: Complemental strand, 51037665 - 51037539
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    ||||||||||  |||||||| ||  | ||||||||  |||||||||||||||| |||||| ||||||||||   |||  || ||||||||||| |||||     
T  51037665 gtcaaaattgttaaaaaggaccactactgcaaaggggctaattcttagggggctaaaattgtagtttttgttcatagagggtcaaaattgcaactttttg 51037566  T
Q  380 aaagttagggtggaaaaatgcacttta 406  Q
    ||||||| ||  ||||| |||||||||    
T  51037565 aaagttaagggagaaaagtgcacttta 51037539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 281 - 386
Target Start/End: Complemental strand, 6249738 - 6249633
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaaaattatagtttttgtatttaggaggccaaaattgcaagtttttta 380  Q
    |||||||||||  |||||||||||| |||||| |  ||||| ||||| |||  |||||| ||||||||||| ||| | |   |||||||||||||||| |    
T  6249738 gtcaaaattgatcaaaaggatcaaatttgcaatgagactaaatcttaagggataaaattgtagtttttgtacttaagggattaaaattgcaagtttttga 6249639  T
Q  381 aagtta 386  Q
    ||||||    
T  6249638 aagtta 6249633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 410 - 495
Target Start/End: Complemental strand, 10287766 - 10287681
Alignment:
Q  410 taaaattttctctgagattgatggtataggataggggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatgc 495  Q
    |||||||||||||||||||   |||||||||| || ||| |  || ||||||||||||||| |||  | |||||||||||||||||    
T  10287766 taaaattttctctgagattatcggtataggatgggagttttgcggggtgccaacctagttgggatgccattgcttccccttgatgc 10287681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 415 - 516
Target Start/End: Original strand, 20952380 - 20952481
Alignment:
Q  415 ttttctctgagattgatggtataggataggggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatgcctcgccaatctcctgactt 514  Q
    |||| |||||||||| ||  ||||||| ||||||||  || ||||||||||||||| ||| ||||| ||||||| |||||| |  |||||||| || |||    
T  20952380 ttttatctgagattggtgccataggatgggggttctgcggggtgccaacctagttgggatgtcgttacttccccctgatgcttgtccaatctcatggctt 20952479  T
Q  515 ag 516  Q
    ||    
T  20952480 ag 20952481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 267 - 406
Target Start/End: Original strand, 46721177 - 46721318
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaa 365  Q
    ||||| ||||||  |||||||||||| | ||||| ||||  ||||||||  |||| ||||||||| | |||||| |||||||||||  |||| ||  |||    
T  46721177 tcagcgttgacttggtcaaaattgaccagaaggaccaaatatgcaaaggggctaaatcttaggggactaaaattgtagtttttgtacatagggggttaaa 46721276  T
Q  366 attgcaagttttttaaagttagggtg-gaaaaatgcacttta 406  Q
    || |||| ||||| |||||||||| | ||||| |||||||||    
T  46721277 atcgcaactttttaaaagttagggggagaaaagtgcacttta 46721318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 353 - 413
Target Start/End: Original strand, 47615592 - 47615653
Alignment:
Q  353 ttaggaggccaaaattgcaagttttttaaagtt-agggtggaaaaatgcactttaacctaaa 413  Q
    ||||| |||||||||||||||||||| |||||| |||| |||||| ||||||||| ||||||    
T  47615592 ttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctaaa 47615653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 52840575 - 52840684
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    ||||||||| || |||| ||| ||| |||||| ||  |||| |||||||||| ||||||| | |||||  || |||||  |||||||||||||||||||     
T  52840575 gtcaaaattaaccaaaatgataaaatttgcaatggggctaaatcttagggggacaaaattgttgttttgataattagggagccaaaattgcaagtttttg 52840674  T
Q  380 aaagttaggg 389  Q
    ||||||||||    
T  52840675 aaagttaggg 52840684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 415
Target Start/End: Complemental strand, 47609827 - 47609691
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggca-aaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    ||||||||||   ||||||| |||| |||||| ||  |||| ||||||||||   ||||| | ||||| ||| ||||| || |||||||||||||||||     
T  47609827 gtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttg 47609728  T
Q  380 aaagtta-gggtggaaaaatgcactttaacctaaaat 415  Q
    ||||||| ||| |||||| |||| |||| ||||||||    
T  47609727 aaagttagggggggaaaagtgcattttagcctaaaat 47609691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 372
Target Start/End: Original strand, 10584012 - 10584102
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaaaattatagtttttgtatttaggaggccaaaattgcaa 372  Q
    |||||||||||| |||||| |||| ||||||||||  |||| ||||||||||| ||||| || ||||| |  ||||| ||||||||| ||||    
T  10584012 gtcaaaattgaccaaaagg-tcaatattgcaaaggggctaaatcttagggggccaaattttaattttttttattagggggccaaaatcgcaa 10584102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 406
Target Start/End: Original strand, 535790 - 535880
Alignment:
Q  318 ctaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagtta-gggtggaaaaatgcacttta 406  Q
    |||| ||||||||||  ||||||||||||||  || ||| | | |||||||||||||||||| ||||||| |||||||||| | |||||||    
T  535790 ctaaatcttagggggtgaaaattatagttttaatacttaagggaccaaaattgcaagtttttgaaagttaggggtggaaaagtacacttta 535880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 333 - 410
Target Start/End: Complemental strand, 52104554 - 52104480
Alignment:
Q  333 caaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttagggtggaaaaatgcactttaacct 410  Q
    |||||||||||||||||||  |||||  |||||||| ||| ||||| |||||||||| |||||| |||| ||||||||    
T  52104554 caaaattatagtttttgtacatagga--ccaaaattacaactttttgaaagttaggg-ggaaaagtgcattttaacct 52104480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 281 - 349
Target Start/End: Complemental strand, 23769986 - 23769918
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaaaattatagtttttg 349  Q
    |||||||||||| ||||||| ||||  |||||| || | || ||||||||| ||||||| |||||||||    
T  23769986 gtcaaaattgaccaaaaggaccaaagatgcaaatgagcgaaatcttaggggtcaaaattgtagtttttg 23769918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 281 - 415
Target Start/End: Original strand, 23770378 - 23770514
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||| ||||| |||||||  |||  ||||||||   ||| ||||||||||| |||||| |||||||||||  || | | ||||||||| || ||||||    
T  23770378 gtcaaagttgaccaaaaggactaaagatgcaaaggggttaaatcttagggggctaaaattgtagtttttgtacataagggaccaaaattgtaactttttt 23770477  T
Q  380 aaagtt-agggtggaaaaatgcactttaacctaaaat 415  Q
    ||| || ||||  ||||| |||||||||||| |||||    
T  23770478 aaaattaaggggagaaaattgcactttaaccaaaaat 23770514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 460 - 496
Target Start/End: Complemental strand, 27636941 - 27636905
Alignment:
Q  460 caacctagttgcgatatcgttgcttccccttgatgcc 496  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  27636941 caacctagttgggatgtcgttgcttccccttgatgcc 27636905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 460 - 496
Target Start/End: Complemental strand, 27640010 - 27639974
Alignment:
Q  460 caacctagttgcgatatcgttgcttccccttgatgcc 496  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  27640010 caacctagttgcgatgtcgttgcttccctttgatgcc 27639974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 3e-28; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 281 - 416
Target Start/End: Original strand, 37728536 - 37728672
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||||| ||||||||||||  ||||||| | |||| |||||  ||| ||||||| |||||||||||  ||||||||||||||||||| |||||     
T  37728536 gtcaaaattgactaaaaggatcaaagatgcaaagaagctaaatcttaaagggtcaaaattgtagtttttgtacataggaggccaaaattgcaacttttta 37728635  T
Q  380 aaagttagggtggaaaaatgcactttaacctaaaatt 416  Q
    |||||||||  | ||||||||||||||||||||||||    
T  37728636 aaagttaggaggaaaaaatgcactttaacctaaaatt 37728672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 281 - 415
Target Start/End: Original strand, 19750546 - 19750681
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    ||||||| |||| |||||||||||| |||||| ||  |||| ||||||||||  |||||| ||||||||||| ||||| ||||||||||||||||||||     
T  19750546 gtcaaaagtgaccaaaaggatcaaatttgcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagttttta 19750645  T
Q  380 aaagttagggtggaaaaatgcactttaacctaaaat 415  Q
    |||||||||| |||||| |||||||||  |||||||    
T  19750646 aaagttaggggggaaaagtgcactttagtctaaaat 19750681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 281 - 415
Target Start/End: Complemental strand, 19789260 - 19789125
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    ||||||| |||| |||||||||||| |||||| ||  |||| ||||||||||  |||||| ||||||||||| ||||| ||||||||||||||||||||     
T  19789260 gtcaaaagtgaccaaaaggatcaaatttgcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagttttta 19789161  T
Q  380 aaagttagggtggaaaaatgcactttaacctaaaat 415  Q
    |||||||||| |||||| |||||||||  |||||||    
T  19789160 aaagttaggggggaaaagtgcactttagtctaaaat 19789125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 281 - 397
Target Start/End: Complemental strand, 31599919 - 31599802
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||| |||||||||||||| |||||||||  |||| ||||||||| | |||||| ||||||||||| ||||| || |||||||||||||||||     
T  31599919 gtcaaaattggcaaaaaggatcaaagttgcaaaggggctaaatcttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 31599820  T
Q  380 aaagttagggtggaaaaa 397  Q
    |||||||||| |||||||    
T  31599819 aaagttaggggggaaaaa 31599802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 267 - 411
Target Start/End: Original strand, 49307985 - 49308129
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaaaattatagtttttgtatttaggaggccaaaa 366  Q
    ||||||||||||  ||||||||||||  |||||| ||||  |||  |||  | || || |||||||||||||| ||||||||||| ||||| ||||||||    
T  49307985 tcagcattgacttggtcaaaattgacccaaaggaccaaagatgcgcaggggcaaaatcatagggggcaaaattgtagtttttgtacttagggggccaaaa 49308084  T
Q  367 ttgcaagttttttaaagttagggtggaaaaatgcactttaaccta 411  Q
    |||||||||||| |||||||||| |||||| ||||||||| ||||    
T  49308085 ttgcaagtttttgaaagttaggggggaaaagtgcactttagccta 49308129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 281 - 418
Target Start/End: Complemental strand, 1963326 - 1963187
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    ||||||||||  |||||||| ||  ||||||||||  |||||||||||||||| |||||| |||||||||||  ||||||||||||||||||| |||||     
T  1963326 gtcaaaattgctaaaaaggaccactattgcaaaggggctaattcttagggggctaaaattgtagtttttgtacataggaggccaaaattgcaactttttg 1963227  T
Q  380 aaagtt-agggtggaaaaatgcactttaacctaaaatttt 418  Q
    |||||| |||| |||||| ||||||||| |||||| ||||    
T  1963226 aaagttaaggggggaaaagtgcactttagcctaaactttt 1963187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 281 - 406
Target Start/End: Original strand, 31600956 - 31601083
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    ||||||||||||||||||||||||| ||||||| |  |||| ||||| |||| ||||||| ||||||||||| ||||| || |||||||||||||||||     
T  31600956 gtcaaaattgacaaaaaggatcaaagttgcaaatgggctaaatcttaaggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 31601055  T
Q  380 aaagttagggtggaaaaa-tgcacttta 406  Q
    |||||||| | ||||||| |||||||||    
T  31601056 aaagttagaggggaaaaagtgcacttta 31601083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 282 - 410
Target Start/End: Original strand, 8758809 - 8758939
Alignment:
Q  282 tcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttta 380  Q
    ||||||||||| |||||||| |||||||||| ||| |||| ||||| ||||| |||||| |||||| |||| ||||| |||||||||||||||||||| |    
T  8758809 tcaaaattgaccaaaaggattaaaattgcaatggagctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaaaattgcaagtttttga 8758908  T
Q  381 aagtt-agggtggaaaaatgcactttaacct 410  Q
    ||||| |||| |||||| |||| ||||||||    
T  8758909 aagttaaggggggaaaagtgcattttaacct 8758939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 284 - 412
Target Start/End: Original strand, 26421597 - 26421725
Alignment:
Q  284 aaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaa 382  Q
    ||||||||| |||| ||||||| |||||| ||  |||| ||||| |||| ||||||| ||||||||||| |||||||| ||||||||||||||||| |||    
T  26421597 aaaattgactaaaatgatcaaatttgcaatggg-ctaaatcttaaggggtcaaaattgtagtttttgtacttaggaggtcaaaattgcaagtttttgaaa 26421695  T
Q  383 gttagggtggaaaaatgcactttaacctaa 412  Q
    ||||| | |||||| ||||||||| |||||    
T  26421696 gttagaggggaaaagtgcactttagcctaa 26421725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 256 - 412
Target Start/End: Original strand, 1290143 - 1290302
Alignment:
Q  256 tggcatgccactcag-cattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatt 353  Q
    |||||||||||| || | ||||||  |||||||||||| ||||||| ||||  ||||||||   ||| ||||||||||| |||||| ||||||||||| |    
T  1290143 tggcatgccacttaggcgttgactcggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagggggctaaaattgtagtttttgtact 1290242  T
Q  354 taggaggccaaaattgcaagttttttaaagtt-agggtggaaaaatgcactttaacctaa 412  Q
    |||  ||||||||||||||| |||| |||||| |||| |||||| ||||||||| |||||    
T  1290243 tagagggccaaaattgcaagattttgaaagttaaggggggaaaagtgcactttagcctaa 1290302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 280 - 411
Target Start/End: Original strand, 1835072 - 1835205
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||| | ||||||| ||||  ||||||||  |||| |||||||||| ||||||| |||||||  || ||||| || |||||||||||||||||    
T  1835072 agtcaaaattggctaaaaggaccaaagatgcaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaagttttt 1835171  T
Q  379 taaagttaggg-tggaaaaatgcactttaaccta 411  Q
     |||||||||| ||||||| ||||||||| ||||    
T  1835172 gaaagttagggatggaaaagtgcactttagccta 1835205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 414
Target Start/End: Complemental strand, 49306939 - 49306770
Alignment:
Q  246 attacacgcatggcatg-ccactcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaaaattatagt 344  Q
    ||||||||| ||||||| ||| ||| ||||||||  ||||||||||| |||||||| ||||  ||||||   ||||| || ||  |||||||||| ||||    
T  49306939 attacacgcgtggcatgtccaatcaacattgactttgtcaaaattgataaaaaggaccaaagatgcaaaatgactaaatcatattgggcaaaattgtagt 49306840  T
Q  345 ttttgtatttaggaggccaaaattgcaagttttttaaagttagggtggaaaaatgcactttaacctaaaa 414  Q
    ||||||| |||   |||||||||||||||||||| |||||| |||   |||| ||||||||| |||||||    
T  49306839 ttttgtacttaaatggccaaaattgcaagtttttgaaagttgggggaaaaaagtgcactttagcctaaaa 49306770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 281 - 411
Target Start/End: Original strand, 52491578 - 52491710
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||||| |||||||| ||| |||||| ||  |||| | ||||||||| |||||| |||||| |||||||||  | ||||||||||||||||||     
T  52491578 gtcaaaattgaccaaaaggattaaagttgcaatggggctaaattttagggggccaaaattgtagtttctgtatttagaggaccaaaattgcaagtttttg 52491677  T
Q  380 aaagtt-agggtggaaaaatgcactttaaccta 411  Q
    |||||| ||||||||||| | ||||||| ||||    
T  52491678 aaagttaagggtggaaaagtacactttagccta 52491710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 246 - 406
Target Start/End: Complemental strand, 1834286 - 1834122
Alignment:
Q  246 attacacgcatggcatgccac-tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg--caaaattata 342  Q
    ||||||| | ||||||||||  |||||||||| |  |||||||||||| ||||||| ||||  |||||| |  |||| ||||||||||  ||||||| ||    
T  1834286 attacacacgtggcatgccaaatcagcattgatttggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttaggggggccaaaattgta 1834187  T
Q  343 gtttttgtatttaggaggccaaaattgcaagttttttaaagttag-ggtggaaaaatgcacttta 406  Q
    |||||| ||  |||| || |||||||| ||||||||||||||||| || |||||| |||||||||    
T  1834186 gtttttatacatagggggtcaaaattgtaagttttttaaagttagagggggaaaagtgcacttta 1834122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 267 - 411
Target Start/End: Original strand, 5526083 - 5526228
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaa 365  Q
    ||||| ||||||  ||||||||||   ||||||| ||||||||||| ||  |||| |||||||||| | ||||| | |||||  || ||||| |||||||    
T  5526083 tcagcgttgactaggtcaaaattggtcaaaaggaccaaaattgcaatggggctaaatcttaggggggctaaattgtggttttgttacttagggggccaaa 5526182  T
Q  366 attgcaagttttttaaagttagggtggaaaaatgcactttaaccta 411  Q
    ||||||||||||| |||||||| | |||||| ||||||||| ||||    
T  5526183 attgcaagtttttgaaagttagaggggaaaagtgcactttagccta 5526228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 256 - 419
Target Start/End: Original strand, 13509304 - 13509469
Alignment:
Q  256 tggcatgccactca-gcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatt 353  Q
    ||||||||||| || || ||||||  |||||||||| | ||||||| ||||  ||||||||  |||| |||||||||  ||||||| |||||||  || |    
T  13509304 tggcatgccacacatgcgttgacttggtcaaaattggccaaaaggagcaaaggtgcaaaggggctaaatcttaggggatcaaaattgtagttttcatact 13509403  T
Q  354 taggaggccaaaattgcaagttttttaaagttagggtggaaaaatgcactttaacctaaaattttc 419  Q
    | || |||||||||||||| ||||| |||||||||| |||||| | ||||||| |||||| |||||    
T  13509404 tggggggccaaaattgcaattttttaaaagttaggggggaaaagtacactttagcctaaatttttc 13509469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 406
Target Start/End: Complemental strand, 5525503 - 5525363
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaa 365  Q
    ||||| ||||||  ||||||||||   ||||||| |||| |||||| ||  |||| |||||||||| | ||||| | ||||| ||| ||||| || ||||    
T  5525503 tcagcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaa 5525404  T
Q  366 attgcaagttttttaaagttagggtggaaaaatgcacttta 406  Q
    ||||||||||||| |||||||||| ||||||||| ||||||    
T  5525403 attgcaagtttttgaaagttaggggggaaaaatgtacttta 5525363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 412
Target Start/End: Complemental strand, 8757804 - 8757672
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattctt-agggggcaaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||||| |||||||| |||||||||| ||  |||| |||| ||||  ||||||| |||||| |||| ||||| ||| ||||||| ||||||||     
T  8757804 gtcaaaattgaccaaaaggattaaaattgcaatggggctaaatcttaagggtccaaaattgtagtttctgtacttagggggctaaaattgtaagtttttg 8757705  T
Q  380 aaagttagggtggaaaaatgcactttaacctaa 412  Q
    ||||||| || | |||| ||||||||| |||||    
T  8757704 aaagttaaggggaaaaagtgcactttagcctaa 8757672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 411
Target Start/End: Complemental strand, 17383123 - 17382991
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    |||||||||||||  ||||||  |  ||||||||||   |||||||| |||||| |||||| ||||||||||| ||| | | ||||||||||||||||||    
T  17383123 agtcaaaattgacctaaaggactactattgcaaaggggataattcttggggggccaaaattgtagtttttgtacttaagggaccaaaattgcaagttttt 17383024  T
Q  379 taaagttagggtggaaaaatgcactttaaccta 411  Q
     ||||||||||  ||||| ||||||||| ||||    
T  17383023 gaaagttaggggagaaaagtgcactttagccta 17382991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 411
Target Start/End: Original strand, 17388181 - 17388313
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    |||||||||||||  ||||||  |  |||| |||||  ||||||||| |||||| |||||| |||||| |||| ||| | | ||||||||||||||||||    
T  17388181 agtcaaaattgacctaaaggactactattgtaaaggggctaattcttggggggccaaaattgtagtttatgtacttaagggaccaaaattgcaagttttt 17388280  T
Q  379 taaagttagggtggaaaaatgcactttaaccta 411  Q
     |||||||||| |||||| ||||||||| ||||    
T  17388281 gaaagttaggggggaaaagtgcactttagccta 17388313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 410
Target Start/End: Original strand, 21539069 - 21539173
Alignment:
Q  308 tgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagtt-agggtggaaaaatgcacttt 405  Q
    ||||||||| |||| |||||||||| ||||||| ||||||||  | |||||||||||||||||||||||||| ||| || ||||||||||| ||  ||||    
T  21539069 tgcaaaggagctaaatcttagggggtcaaaattgtagtttttacacttaggaggccaaaattgcaagtttttaaaaattaagggtggaaaagtgtgcttt 21539168  T
Q  406 aacct 410  Q
    |||||    
T  21539169 aacct 21539173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 412
Target Start/End: Complemental strand, 33296389 - 33296221
Alignment:
Q  246 attacacgcatggcatg-ccactcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatag 343  Q
    |||||| || ||||||| ||| |||||||||| |  || ||||||||| |||| |||||||  |||||| || |||| |  |||||| | ||||||||||    
T  33296389 attacatgcgtggcatgtccaatcagcattgatttggttaaaattgaccaaaatgatcaaagatgcaaatgagctaaattataggggaccaaaattatag 33296290  T
Q  344 tttttgtatttaggaggccaaaattgcaagttttttaaagttagggtggaaaaatgcactttaacctaa 412  Q
    ||||| || ||||||| ||||||||  |||||||| ||| ||||||   ||||||||||||||||||||    
T  33296289 tttttatacttaggagaccaaaattataagtttttgaaaattagggaaaaaaaatgcactttaacctaa 33296221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 267 - 412
Target Start/End: Original strand, 25685779 - 25685926
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaa 365  Q
    ||||| ||||||  ||||||||||   ||||||| |||| |||||| ||  |||| |||||||||| | ||||| | ||||| ||| ||||| |||||||    
T  25685779 tcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttagggggtctaaattgtggttttggtacttagggggccaaa 25685878  T
Q  366 attgcaagttttttaaagttag-ggtggaaaaatgcactttaacctaa 412  Q
    ||||||||||||| |||||||| || |||||| ||||||||| |||||    
T  25685879 attgcaagtttttgaaagttagagggggaaaagtgcactttagcctaa 25685926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 267 - 406
Target Start/End: Original strand, 10471345 - 10471486
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaa 365  Q
    ||||| ||||||  ||||||||||   ||||||| |||| |||||| ||  |||| |||||||||| | ||||| | ||||| ||| ||||| |||||||    
T  10471345 tcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaa 10471444  T
Q  366 attgcaagttttttaaagtt-agggtggaaaaatgcacttta 406  Q
    ||||||||||||| |||||| |||| |||||| |||||||||    
T  10471445 attgcaagtttttgaaagttaaggggggaaaagtgcacttta 10471486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 406
Target Start/End: Complemental strand, 35934482 - 35934347
Alignment:
Q  270 gcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattctt-agggggcaaaattatagtttttgtatttaggaggccaaaatt 368  Q
    |||||||||| |||||||||||| ||||| || ||| |||||| ||  |||| |||| ||||| |||||||||| ||| | || ||||| | ||||||||    
T  35934482 gcattgactg-gtcaaaattgaccaaaagaattaaagttgcaatggggctaaatcttaaggggccaaaattataatttctttacttaggggaccaaaatt 35934384  T
Q  369 gcaagttttttaaagttagggtggaaaaatgcacttta 406  Q
     ||||||||| |||||||||| |||||| |||||||||    
T  35934383 acaagtttttgaaagttaggg-ggaaaagtgcacttta 35934347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 509
Target Start/End: Original strand, 13242175 - 13242274
Alignment:
Q  410 taaaattttctctgagattgatggtataggataggggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatgcctcgccaatctcct 509  Q
    |||| |||||| |||||||   |||||||||| ||||||||  || ||||||||||||||  |||  |||||||||||||||||||||  ||||||||||    
T  13242175 taaatttttctttgagattagcggtataggatgggggttctgcggggtgccaacctagtttggatgccgttgcttccccttgatgcctgtccaatctcct 13242274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 414
Target Start/End: Original strand, 55603501 - 55603636
Alignment:
Q  279 gagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||||||| ||||||  |  |||||||| || || |||||| |||| ||||||  |||||||||||   ||| |   ||||||||||||||||    
T  55603501 gagtcaaaattgacataaaggactactattgcaaatgagcttattcttgggggccaaaatagtagtttttgtacacaggggattaaaattgcaagttttt 55603600  T
Q  379 taaagttagggtggaaaaatgcactttaacctaaaa 414  Q
     ||||||| || | |||| |||||||||||||||||    
T  55603601 gaaagttaaggggaaaaagtgcactttaacctaaaa 55603636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 318 - 414
Target Start/End: Complemental strand, 8155830 - 8155733
Alignment:
Q  318 ctaattcttagggggc-aaaattatagtttttgtatttaggag-gccaaaattgcaagttttttaaagttagggtggaaaaatgcactttaacctaaaa 414  Q
    |||| ||||||||||| |||||| ||||||||| | ||||| | || |||||||||||||||| |||||||||| |||||| ||||||||||| |||||    
T  8155830 ctaaatcttagggggccaaaattgtagtttttgaacttaggggagctaaaattgcaagtttttgaaagttaggg-ggaaaagtgcactttaacataaaa 8155733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 327 - 407
Target Start/End: Complemental strand, 12129706 - 12129625
Alignment:
Q  327 agggggcaaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagtt-agggtggaaaaatgcactttaa 407  Q
    ||||| ||||||| ||||||||||| ||| | |||||||||||||||||||| |||||| || | |||||| ||||||||||    
T  12129706 aggggtcaaaattgtagtttttgtacttacggggccaaaattgcaagtttttgaaagttaagaggggaaaagtgcactttaa 12129625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 267 - 406
Target Start/End: Complemental strand, 25685078 - 25684937
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaa 365  Q
    ||||| ||||||  |||||||||||  ||||||| |||| |||||| ||  |||| |||||||||| | ||||| | ||||| ||| ||||  || ||||    
T  25685078 tcagcgttgacttggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagagggtcaaa 25684979  T
Q  366 attgcaagttttttaaagtta-gggtggaaaaatgcacttta 406  Q
    ||||||||||||| ||||||| ||| |||||| |||||||||    
T  25684978 attgcaagtttttgaaagttagggggggaaaagtgcacttta 25684937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 281 - 407
Target Start/End: Original strand, 35935504 - 35935632
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||| | |||||||| ||| |||||| |   |||| |||||||||| ||||||| |||||| |||| ||||| ||| |||||||||| |||||     
T  35935504 gtcaaaattggccaaaaggattaaagttgcaatgaggctaaatcttagggggccaaaattgtagtttatgtacttagggggctaaaattgcaaattttta 35935603  T
Q  380 aaagtt-agggtggaaaaatgcactttaa 407  Q
    |||||| |||| || ||| ||||||||||    
T  35935604 aaagttaagggggggaaagtgcactttaa 35935632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 412
Target Start/End: Complemental strand, 48780365 - 48780245
Alignment:
Q  294 aaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagtta-gggtg 391  Q
    ||||||| |||| |||||| ||  |||| |||||||||| | ||||| | ||||| ||| ||||| || ||||||||||||||||| ||||||| ||| |    
T  48780365 aaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttaaaagttagggggg 48780266  T
Q  392 gaaaaatgcactttaacctaa 412  Q
    ||||| ||||||||| |||||    
T  48780265 gaaaagtgcactttagcctaa 48780245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 246 - 406
Target Start/End: Original strand, 1964376 - 1964539
Alignment:
Q  246 attacacgcatggcatgccac-tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatag 343  Q
    ||||||| | ||||||||||  ||||| ||||||  ||||||||||  |||||||| ||  || |||||||   ||||||||| ||| | |||||| |||    
T  1964376 attacacacgtggcatgccaaatcagcgttgacttggtcaaaattgctaaaaaggaccactatcgcaaaggggataattcttaagggaccaaaattgtag 1964475  T
Q  344 tttttgtatttaggaggccaaaattgcaagttttttaaagtt-agggtggaaaaatgcacttta 406  Q
    |||||||   |||| ||||||||||| || ||||| |||||| ||||||||||| |||||||||    
T  1964476 tttttgttcatagggggccaaaattgtaactttttaaaagttaagggtggaaaagtgcacttta 1964539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 406
Target Start/End: Complemental strand, 14869028 - 14868893
Alignment:
Q  271 cattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaaaattatagtttttgtatttaggaggccaaaattgc 370  Q
    |||||||||||||||||| ||  |||||||  |||   |||| ||  |||||||||||||||  ||||| | |||||  || ||||  ||||||||||||    
T  14869028 cattgactgagtcaaaatagagcaaaaggacgaaataagcaatggggctaattcttagggggggaaattgtggttttgatacttagcgggccaaaattgc 14868929  T
Q  371 aagttttttaaagttagggtggaaaaatgcacttta 406  Q
    ||| |||| |||| ||||| |||||| |||||||||    
T  14868928 aagattttgaaagataggggggaaaagtgcacttta 14868893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 406
Target Start/End: Original strand, 14876906 - 14877041
Alignment:
Q  271 cattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaaaattatagtttttgtatttaggaggccaaaattgc 370  Q
    |||||||||||||||||| ||  |||||||  |||   |||| ||  |||||||||||||||  ||||| | |||||  || ||||  ||||||||||||    
T  14876906 cattgactgagtcaaaatagagcaaaaggacgaaataagcaatggggctaattcttagggggggaaattgtggttttgatacttagcgggccaaaattgc 14877005  T
Q  371 aagttttttaaagttagggtggaaaaatgcacttta 406  Q
    ||| |||| |||| ||||| |||||| |||||||||    
T  14877006 aagattttgaaagataggggggaaaagtgcacttta 14877041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 280 - 414
Target Start/End: Complemental strand, 21178127 - 21177992
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||| |||||| ||||||| ||||||| |  |||| | |||||||| ||||||| ||||||||||   |||| |  ||||||||||| ||| |    
T  21178127 agtcaaaattggcaaaaatgatcaaagttgcaaaagggctaaattttagggggtcaaaattgtagtttttgttcataggggatcaaaattgcaactttat 21178028  T
Q  379 taaagttagggtggaaaaatgcactttaacctaaaa 414  Q
     |||||||||| || ||| | ||||||| |||||||    
T  21178027 gaaagttagggggggaaagtacactttagcctaaaa 21177992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 333 - 388
Target Start/End: Original strand, 33310113 - 33310168
Alignment:
Q  333 caaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttagg 388  Q
    |||||||||||||||||||||||||  || |||||| ||||||||| |||||||||    
T  33310113 caaaattatagtttttgtatttagggagctaaaattacaagtttttaaaagttagg 33310168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 267 - 406
Target Start/End: Complemental strand, 10470690 - 10470549
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattctta-gggggcaaaattatagtttttgtatttaggaggccaaa 365  Q
    ||||| ||||||  |||||||||||  ||||||| |||| |||||| ||  |||| ||||| |||||| ||||| |  |||| ||| ||||  || ||||    
T  10470690 tcagcgttgacttggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtgattttggtacttagagggtcaaa 10470591  T
Q  366 attgcaagttttttaaagtt-agggtggaaaaatgcacttta 406  Q
    ||||||||||||| |||||| |||| |||||| |||||||||    
T  10470590 attgcaagtttttgaaagttaaggggggaaaagtgcacttta 10470549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 267 - 411
Target Start/End: Complemental strand, 13386160 - 13386012
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaa--aattatagtttttgtatttaggaggccaa 364  Q
    ||||| ||||||  |||||||||||  ||||||| |||| |||||| |   |||| ||||||||||  |  |||| | ||||| ||| ||||| ||||||    
T  13386160 tcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatgaggctaaatcttagggggggataaattgtggttttggtacttagggggccaa 13386061  T
Q  365 aattgcaagtttttt-aaagttag-ggtggaaaaatgcactttaaccta 411  Q
    ||||||||||||||| |||||||| || |||||| ||||||||| ||||    
T  13386060 aattgcaagttttttgaaagttagagggggaaaagtgcactttagccta 13386012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 415 - 516
Target Start/End: Complemental strand, 38499936 - 38499835
Alignment:
Q  415 ttttctctgagattgatggtataggataggggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatgcctcgccaatctcctgactt 514  Q
    |||| ||||||||||  || |||||||  ||||| |  || ||||||||||||||| ||| | ||||||||||| ||||||||  ||||||||||| |||    
T  38499936 ttttatctgagattggcggcataggatgagggttttgcggggtgccaacctagttgggatgttgttgcttccccctgatgcctgtccaatctcctggctt 38499837  T
Q  515 ag 516  Q
    ||    
T  38499836 ag 38499835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 388
Target Start/End: Original strand, 54110643 - 54110707
Alignment:
Q  325 ttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttagg 388  Q
    ||||||||| ||||||||| ||||||||  | ||||| ||||||||||| |||||||||||||||    
T  54110643 ttagggggctaaaattataatttttgtacattggaggtcaaaattgcaaattttttaaagttagg 54110707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 494
Target Start/End: Original strand, 20383961 - 20384020
Alignment:
Q  435 ataggataggggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatg 494  Q
    ||||||| ||||||||| |   ||||||| |||||| |||||||||||||||||||||||    
T  20383961 ataggatgggggttcttcgagatgccaacttagttgagatatcgttgcttccccttgatg 20384020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 401
Target Start/End: Original strand, 46638682 - 46638817
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaa 365  Q
    ||||| ||||||  |||||||||||  |||| ||  ||| ||||||||| ||||| ||||||||||| |||||| || |||||||   |||| |  ||||    
T  46638682 tcagcgttgactttgtcaaaattgatcaaaaagactaaagttgcaaagggactaaatcttagggggctaaaattgtaatttttgttcataggggatcaaa 46638781  T
Q  366 attgcaagttttttaaagttagggtggaaaaatgca 401  Q
    ||| ||| ||||| ||||||| || |||||||||||    
T  46638782 attccaactttttgaaagttaaggaggaaaaatgca 46638817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 389
Target Start/End: Original strand, 10448196 - 10448340
Alignment:
Q  246 attacacgcatggcatgccactcag-cattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatag 343  Q
    ||||||| | |||||||||||  || ||||||||| |||||||||| | ||||||| ||||  ||||||||  |||  |||||| |||| |||||| |||    
T  10448196 attacacacgtggcatgccacgtaggcattgactg-gtcaaaattggccaaaaggaccaaagatgcaaaggggctatatcttagagggccaaaattgtag 10448294  T
Q  344 tttttgtatttaggaggccaaaattgcaagttttttaaagttaggg 389  Q
    ||||||||  |||| ||| ||||| |||| ||||| ||| ||||||    
T  10448295 tttttgtacatagggggctaaaatcgcaactttttgaaacttaggg 10448340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 461 - 494
Target Start/End: Original strand, 12714267 - 12714300
Alignment:
Q  461 aacctagttgcgatatcgttgcttccccttgatg 494  Q
    |||||||||| |||||||||||||||||||||||    
T  12714267 aacctagttgggatatcgttgcttccccttgatg 12714300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 411
Target Start/End: Complemental strand, 50909348 - 50909271
Alignment:
Q  334 aaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttagggtggaaaaatgcactttaaccta 411  Q
    |||||| |||||||| ||| ||||||| ||||||||||| ||||| ||| ||||||   |||||| ||||||| ||||    
T  50909348 aaaattgtagtttttatatataggaggtcaaaattgcaactttttaaaacttaggggaaaaaaatacactttagccta 50909271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 406
Target Start/End: Original strand, 50909643 - 50909771
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg--caaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    |||||||||||  ||||||| ||||  ||||||||  |||| ||||| ||||  ||||||| |||||||| ||  ||||  | |||||| |||| |||||    
T  50909643 gtcaaaattgatcaaaaggaccaaagatgcaaaggggctaaatcttaagggggtcaaaattgtagtttttatacatagggagtcaaaatcgcaacttttt 50909742  T
Q  379 taaagttagggtggaaaaa-tgcacttta 406  Q
     ||| |||||||||||||| |||||||||    
T  50909743 aaaacttagggtggaaaaagtgcacttta 50909771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 407
Target Start/End: Complemental strand, 55602451 - 55602378
Alignment:
Q  334 aaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttagggtggaaaaatgcactttaa 407  Q
    |||||| |||||||| ||| |||  | | |||||||||||||||| |||||||  | |||||||||||||||||    
T  55602451 aaaattgtagtttttatatatagaggactaaaattgcaagtttttgaaagttaaaggggaaaaatgcactttaa 55602378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 247 - 326
Target Start/End: Original strand, 2412855 - 2412935
Alignment:
Q  247 ttacacgcatggcatgccactcagca-ttgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattctt 326  Q
    |||||||| ||||||||||| |||   |||| | ||||||||||||| |||||||||||| |||||| ||| |||| ||||    
T  2412855 ttacacgcgtggcatgccacgcaggtgttgattaagtcaaaattgactaaaaggatcaaatttgcaatggagctaaatctt 2412935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 33997839 - 33997883
Alignment:
Q  295 aaaggatcaaaattgcaaaggaactaattcttagggggcaaaatt 339  Q
    ||||||||| |||||||||||  |||| |||||||||||||||||    
T  33997839 aaaggatcacaattgcaaaggggctaaatcttagggggcaaaatt 33997883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 281 - 412
Target Start/End: Complemental strand, 17600 - 17467
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    ||||||||||  ||||| |||| ||||||||||||   |||||||| |||||| |||||| ||||||||||| ||||| ||||||||||||||||||||     
T  17600 gtcaaaattggtaaaaaagatcgaaattgcaaaggggataattcttggggggccaaaattgtagtttttgtacttagggggccaaaattgcaagttttta 17501  T
Q  380 aaagttagggtggaaaaa-tgcactttaacctaa 412  Q
    ||||||| || ||||||| ||||||||| |||||    
T  17500 aaagttaagggggaaaaagtgcactttagcctaa 17467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 406
Target Start/End: Original strand, 18747 - 18874
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||||| |||| ||| ||| |||||| ||  |||| | ||| ||||| ||||||||||||||||||  |||| | |||||||||||| |||||     
T  18747 gtcaaaattgaccaaaatgattaaagttgcaatggggctaaattttaaggggccaaaattatagtttttgtacctaggggaccaaaattgcaaattttta 18846  T
Q  380 aaagttagggtggaaaaa-tgcacttta 406  Q
    |||||||||  ||||||| |||||||||    
T  18847 aaagttaggagggaaaaagtgcacttta 18874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 284 - 415
Target Start/End: Original strand, 3282 - 3414
Alignment:
Q  284 aaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaa 382  Q
    ||||||| |||||||||||||| |||||||||  |||| ||||||||| | ||||||||||||||||||  || | || |||||||| |||||||| |||    
T  3282 aaaattggcaaaaaggatcaaagttgcaaaggggctaaatcttaggggaccaaaattatagtttttgtacctatggggtcaaaattgtaagtttttgaaa 3381  T
Q  383 gttagggtggaaaaatgcactttaacctaaaat 415  Q
    || |||| |||||| ||||||||| ||||||||    
T  3382 gtaaggggggaaaagtgcactttagcctaaaat 3414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 2e-23; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 280 - 406
Target Start/End: Complemental strand, 18371555 - 18371427
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||||| ||||||||||||  |||||| |  |||| ||||||||||| |||||| ||||||||||| ||| | ||||||||||||||||||||    
T  18371555 agtcaaaattgaccaaaaggatcaaagatgcaaatgtgctaaatcttagggggccaaaattgtagtttttgtacttaaggggccaaaattgcaagttttt 18371456  T
Q  379 taaagttagg-gtggaaaaatgcacttta 406  Q
     ||||||||| | |||||| |||||||||    
T  18371455 gaaagttaggaggggaaaagtgcacttta 18371427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 247 - 389
Target Start/End: Complemental strand, 31659788 - 31659644
Alignment:
Q  247 ttacacgcatggcatgccactca-gcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagt 344  Q
    |||||| | ||||||||||| || || ||||||  |||||||||||| |||||||||||| |||||| ||  |||| ||||||||||| |||||| ||||    
T  31659788 ttacacacgtggcatgccacgcatgcgttgactatgtcaaaattgaccaaaaggatcaaatttgcaatggggctaaatcttagggggccaaaattgtagt 31659689  T
Q  345 ttttgtatttaggaggccaaaattgcaagttttttaaagttaggg 389  Q
    ||||||| ||||| || |||||||| |||||||| ||||||||||    
T  31659688 ttttgtacttagggggtcaaaattgtaagtttttgaaagttaggg 31659644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 280 - 396
Target Start/End: Original strand, 18372427 - 18372544
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||||| ||||||| ||||  | ||||||  |||| ||||||||||| |||||| ||||||||||| ||||| ||||||||||||||||||||    
T  18372427 agtcaaaattgaccaaaaggaccaaagatacaaaggggctaaatcttagggggccaaaattgtagtttttgtacttagggggccaaaattgcaagttttt 18372526  T
Q  379 taaagttagggtggaaaa 396  Q
     ||| |||||| ||||||    
T  18372527 gaaaattaggggggaaaa 18372544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 281 - 411
Target Start/End: Original strand, 42886257 - 42886389
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||||| |||| |||||||  |||||| |  |||| ||||||||||| |||||| ||||||||||||||||| || ||||||||||| |||||     
T  42886257 gtcaaaattgaccaaaatgatcaaagatgcaaatgggctaaatcttagggggctaaaattgtagtttttgtatttagggggtcaaaattgcaaatttttg 42886356  T
Q  380 aaagttagg-gtggaaaaatgcactttaaccta 411  Q
    ||||||||| |  ||||| ||||||||||||||    
T  42886357 aaagttaggaggagaaaagtgcactttaaccta 42886389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 282 - 415
Target Start/End: Original strand, 11662523 - 11662658
Alignment:
Q  282 tcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttta 380  Q
    |||||||||||| ||||||  |  ||||||||||  ||||||||| |||||| ||||||||||||||||||  |||   || |||||||||||||||| |    
T  11662523 tcaaaattgacataaaggactactattgcaaaggggctaattcttggggggccaaaattatagtttttgtacatagagagctaaaattgcaagtttttga 11662622  T
Q  381 aagtta-gggtggaaaaatgcactttaacctaaaat 415  Q
    |||||| ||| |||||||||||||||||||| ||||    
T  11662623 aagttaaggggggaaaaatgcactttaaccttaaat 11662658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 280 - 378
Target Start/End: Complemental strand, 22629617 - 22629518
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||||| ||||||| ||||  ||||||||  |||| ||||||||||| |||||| ||||||||||| |||||||||||||||| |||||||||    
T  22629617 agtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattacaagttttt 22629518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 267 - 417
Target Start/End: Complemental strand, 127479 - 127329
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaaaattatagtttttgtatttaggaggccaaaa 366  Q
    ||||| ||||||  ||||||||||   ||||||| |||| ||||||  |  |||| ||||||||||| ||||| | ||||| ||| ||||| | ||||||    
T  127479 tcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaattgggctaaatcttagggggctaaattgtggttttggtacttaggggaccaaaa 127380  T
Q  367 ttgcaagttttttaaagttagggtggaaaaatgcactttaacctaaaattt 417  Q
    |||||||||||| |||||||||| |||||| ||||||||| ||||| ||||    
T  127379 ttgcaagtttttgaaagttaggggggaaaagtgcactttagcctaagattt 127329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 246 - 404
Target Start/End: Original strand, 14999091 - 14999249
Alignment:
Q  246 attacacgcatggcatgccac-tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatag 343  Q
    |||||||  |||||||||||| | ||||||||| | ||||||||||||  |||||| ||||  ||||||||  |||| |||||||| || |||||| |||    
T  14999091 attacacatatggcatgccacgtaagcattgaccg-gtcaaaattgacctaaaggaacaaagatgcaaaggggctaaatcttagggcgccaaaattgtag 14999189  T
Q  344 tttttgtatttaggaggccaaaattgcaagttttttaaagttagggtggaaaaatgcactt 404  Q
    |||||||||||||| || |||||||||||| |||| ||| |||||| |||||| |||||||    
T  14999190 tttttgtatttagggggtcaaaattgcaag-ttttgaaaattaggggggaaaagtgcactt 14999249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 267 - 412
Target Start/End: Original strand, 3227551 - 3227698
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggg-gcaaaattatagtttttgtatttaggaggccaaa 365  Q
    ||||| ||||||  |||||||||||  ||||||| |||| |||||| ||  |||| ||||||||| || ||||| | ||||| ||| ||||| |||||||    
T  3227551 tcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggtgctaaattgtggttttggtacttagggggccaaa 3227650  T
Q  366 attgcaagttttttaaagtta-gggtggaaaaatgcactttaacctaa 412  Q
    ||||||||||||| ||||||| ||| |||||| ||||||||| |||||    
T  3227651 attgcaagtttttgaaagttagggggggaaaagtgcactttagcctaa 3227698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 267 - 389
Target Start/End: Original strand, 31949759 - 31949882
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggg-gcaaaattatagtttttgtatttaggaggccaaa 365  Q
    ||||| ||||||  |||||||||||  ||||||| |||| |||||| ||  |||| ||||||||| || ||||| | ||||| ||||||||| |||||||    
T  31949759 tcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggtgctaaattgtggttttggtatttagggggccaaa 31949858  T
Q  366 attgcaagttttttaaagttaggg 389  Q
    ||||||||||||| ||||||||||    
T  31949859 attgcaagtttttgaaagttaggg 31949882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 244 - 386
Target Start/End: Complemental strand, 43899613 - 43899470
Alignment:
Q  244 ttattacacgcatggcatgccactcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttag-ggggcaaaattata 342  Q
    ||||||||||| |||||||||||||||| |||||| ||||||||||| | |||| |||||||  || ||| |  |||||| |||| | | ||||||| ||    
T  43899613 ttattacacgcgtggcatgccactcagctttgactaagtcaaaattggccaaaaagatcaaagatgtaaatgtgctaatttttagagagccaaaattgta 43899514  T
Q  343 gtttttgtatttaggaggccaaaattgcaagttttttaaagtta 386  Q
     ||||| ||||||| ||  ||||||||||||||||| |||||||    
T  43899513 atttttatatttagaagatcaaaattgcaagtttttgaaagtta 43899470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 412
Target Start/End: Original strand, 22630422 - 22630556
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||||| ||||||| ||||  | |||||   || | ||||||||||| |||||| ||||||||||| ||||| ||||||||||||||||||||    
T  22630422 agtcaaaattgaccaaaaggaccaaagatacaaagaggctgaatcttagggggctaaaattgtagtttttgtaattagggggccaaaattgcaagttttt 22630521  T
Q  379 taaagtta-gggtggaaaaatgcactttaacctaa 412  Q
     ||||||| ||  |||||| ||||||||| |||||    
T  22630522 gaaagttatggagggaaaagtgcactttagcctaa 22630556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 412
Target Start/End: Original strand, 7501812 - 7501956
Alignment:
Q  270 gcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaatt 368  Q
    ||||||| | ||||||||||||| ||||||| ||||  ||||||||  |||  ||||| ||||| |||||| | |||||  || ||||| ||||||||||    
T  7501812 gcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctacatcttaaggggccaaaattgttgttttgatacttagggggccaaaatt 7501911  T
Q  369 gcaagttttttaaagttag-ggtggaaaaatgcactttaacctaa 412  Q
    |||||||||| |||||||| || |||||| ||||||||| |||||    
T  7501912 gcaagtttttgaaagttagagggggaaaagtgcactttagcctaa 7501956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 413
Target Start/End: Complemental strand, 31949466 - 31949318
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaa 365  Q
    ||||| ||||||  |||||||||||  ||||||| |||| |||||| ||  |||| |||||||||| | ||||| | ||||| ||| ||||| |||||||    
T  31949466 tcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaa 31949367  T
Q  366 attgcaagttttttaaagttaggg-tggaaaaatgcactttaacctaaa 413  Q
    ||||||||||||| ||| ||||||  |||||| ||||||||| ||||||    
T  31949366 attgcaagtttttgaaaattagggagggaaaagtgcactttagcctaaa 31949318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 43899835 - 43899787
Alignment:
Q  14 gaagaaaagagaaaaagaggagataaggatgatcttgtttctacttcaa 62  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43899835 gaagaagagagaaaaagaggagataaggatgatcttgtttctacttcaa 43899787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 280 - 406
Target Start/End: Complemental strand, 7500585 - 7500458
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||||| ||||||||||||  ||||||||  |||| |||||||||| ||||||| | |||| | || ||||  |  |||||||||||||||||    
T  7500585 agtcaaaattgaccaaaaggatcaaagatgcaaaggggctaaatcttagggggccaaaattgtggtttctatacttagaggatcaaaattgcaagttttt 7500486  T
Q  379 taaagttagggtggaaaaatgcacttta 406  Q
     ||||||| || |||||| |||||||||    
T  7500485 gaaagttaagggggaaaagtgcacttta 7500458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 47369864 - 47369802
Alignment:
Q  327 agggggcaaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttaggg 389  Q
    ||||| ||||||||||||||||||| ||| ||||| |||||||||||||||| ||||||||||    
T  47369864 aggggccaaaattatagtttttgtacttatgaggctaaaattgcaagtttttgaaagttaggg 47369802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 283 - 411
Target Start/End: Complemental strand, 21505542 - 21505414
Alignment:
Q  283 caaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagttttttaa 381  Q
    |||||||| | ||||||| ||||  ||||||||  |||| ||||| |||| ||||||| |||||||||||| | || ||||||||| |||| ||||| ||    
T  21505542 caaaattgtccaaaaggaccaaagatgcaaaggggctaaatcttatggggtcaaaattgtagtttttgtatatcgggggccaaaatcgcaactttttgaa 21505443  T
Q  382 agttagggtggaaaaatgcactttaaccta 411  Q
    |||||||| |||||| ||||||||| ||||    
T  21505442 agttaggg-ggaaaagtgcactttagccta 21505414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 267 - 406
Target Start/End: Complemental strand, 3227251 - 3227111
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattctta-gggggcaaaattatagtttttgtatttaggaggccaaa 365  Q
    ||||| ||||||  ||||||||||   ||||||| |||| |||||| ||  |||| ||||| |||||| ||||| | ||||| ||| ||||| |||||||    
T  3227251 tcagcgttgactaggtcaaaattgttcaaaaggaccaaagttgcaatggggctaaatcttaagggggctaaattgtggttttggtacttagggggccaaa 3227152  T
Q  366 attgcaagttttttaaagttagggtggaaaaatgcacttta 406  Q
    ||||||||||||| ||| |||||| || ||| |||||||||    
T  3227151 attgcaagtttttgaaaattagggggggaaagtgcacttta 3227111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 415 - 507
Target Start/End: Complemental strand, 38993183 - 38993091
Alignment:
Q  415 ttttctctgagattgatggtataggataggggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatgcctcgccaatctc 507  Q
    |||| ||||||||||  || ||||||| ||||||||  || ||||||||||||||| ||| ||||||||||||| ||||||||  ||||||||    
T  38993183 ttttatctgagattggcggcataggatgggggttctgcggggtgccaacctagttgggatgtcgttgcttccccctgatgcctgtccaatctc 38993091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 237 - 406
Target Start/End: Complemental strand, 46482772 - 46482600
Alignment:
Q  237 aattagtttattacacgcatggcatgccactcag-cattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggg-gca 334  Q
    ||||| || ||||||| |||||| ||||||  || |||||| | ||||||||||||| |||||||| |||| |||||||||  ||| |||||||||   |    
T  46482772 aattaattaattacacacatggcttgccacgtaggcattgaataagtcaaaattgaccaaaaggataaaaaatgcaaaggagataaatcttaggggatta 46482673  T
Q  335 aaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttagg-gtggaaaaatgcacttta 406  Q
    |||||||||||||||||  |||| || |||| || ||| ||||| ||| ||||| |  |||||||||||||||    
T  46482672 aaattatagtttttgtacatagggggtcaaatttacaaatttttgaaaattaggaggagaaaaatgcacttta 46482600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 418
Target Start/End: Original strand, 17782572 - 17782663
Alignment:
Q  328 gggggcaaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttag-ggtggaaaaatgcactttaacctaaaatttt 418  Q
    |||||| ||||| | ||||| ||| ||||| |||||||||||||||||||| |||||||| || |||||| ||||||||| |||| ||||||    
T  17782572 gggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcctataatttt 17782663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 333 - 406
Target Start/End: Original strand, 48934927 - 48935001
Alignment:
Q  333 caaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagtta-gggtggaaaaatgcacttta 406  Q
    ||||||| ||||||||||| ||||  || ||||||| ||||||||| ||||||| ||||||||||||||||||||    
T  48934927 caaaattttagtttttgtacttagagggtcaaaattacaagtttttgaaagttaggggtggaaaaatgcacttta 48935001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 267 - 410
Target Start/End: Original strand, 128558 - 128703
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaa 365  Q
    ||||||||||||  ||||||||||   |||||| ||||| |||||| ||  || | |||||||||| | ||||| | ||||| ||| ||||| || ||||    
T  128558 tcagcattgactaggtcaaaattggttaaaagggtcaaagttgcaatggggctgaatcttaggggggctaaattgtggttttggtacttagggggtcaaa 128657  T
Q  366 attgcaagttttttaaagttagggt-ggaaaaatgcactttaacct 410  Q
    ||||||| ||||| ||||||| ||| |||||| |||||||||||||    
T  128658 attgcaaatttttgaaagttatggtgggaaaagtgcactttaacct 128703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 411
Target Start/End: Complemental strand, 11658517 - 11658377
Alignment:
Q  273 ttgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattctt-agggggcaaaattatagtttttgtatttaggaggccaaaattgca 371  Q
    ||||| ||||||||||||||| ||||||  |  ||| ||||||  ||||||||| ||||  ||||||| |||||||||||  |||| ||| |||||||||    
T  11658517 ttgaccgagtcaaaattgacataaaggactactattacaaaggggctaattcttgagggaccaaaattgtagtttttgtacatagggggctaaaattgca 11658418  T
Q  372 agttttttaaagtt-agggtggaaaaatgcactttaaccta 411  Q
     |||||| |||||| |||| |||||| |||| |||| ||||    
T  11658417 tgtttttgaaagttaaggggggaaaagtgcaatttagccta 11658377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 281 - 406
Target Start/End: Complemental strand, 769543 - 769416
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    ||||||||||   ||||||||||||  |||||| |   ||||||| |||| || ||||||||| |||||||| |||||| | |||||||||||||||||     
T  769543 gtcaaaattgggcaaaaggatcaaagatgcaaatgggttaattctaagggagccaaaattataatttttgtacttaggatgtcaaaattgcaagtttttg 769444  T
Q  380 aaagtta-gggtggaaaaatgcacttta 406  Q
    ||| |||  ||||||||| |||||||||    
T  769443 aaaattacaggtggaaaattgcacttta 769416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 516
Target Start/End: Original strand, 20382332 - 20382426
Alignment:
Q  422 tgagattgatggtataggataggggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatgcctcgccaatctcctgacttag 516  Q
    ||||||||  || ||||||| ||||||||  || ||||||||||||||| ||| | ||||||||||| ||||||||   |||||||||| |||||    
T  20382332 tgagattggcggcataggatgggggttctgcggggtgccaacctagttgggatgttgttgcttccccctgatgcctattcaatctcctggcttag 20382426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 343 - 412
Target Start/End: Original strand, 34174017 - 34174086
Alignment:
Q  343 gtttttgtatttaggaggccaaaattgcaagttttttaaagttagggtggaaaaatgcactttaacctaa 412  Q
    ||||| ||| ||||| ||||||||||||||| |||| |||| ||||| |||||| ||||||||| |||||    
T  34174017 gttttggtacttagggggccaaaattgcaagattttgaaagataggggggaaaagtgcactttagcctaa 34174086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 267 - 406
Target Start/End: Original strand, 47525324 - 47525465
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaa 365  Q
    ||||| ||||||  ||||||||||   ||||||| |||| |||||| ||  |||| |||||||||| | ||||| | |||||  || ||||| ||| |||    
T  47525324 tcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttgatacttagggggctaaa 47525423  T
Q  366 attgcaagttttttaaagttag-ggtggaaaaatgcacttta 406  Q
    ||||||||||||| |||||||| || |||||| |||||||||    
T  47525424 attgcaagtttttgaaagttagagggggaaaagtgcacttta 47525465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 435 - 495
Target Start/End: Original strand, 37375021 - 37375081
Alignment:
Q  435 ataggataggggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatgc 495  Q
    ||||||| ||||||| | || ||||||||||||||| ||| |||| |||||||||||||||    
T  37375021 ataggatgggggttcctcggggtgccaacctagttgggatgtcgtcgcttccccttgatgc 37375081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 406
Target Start/End: Complemental strand, 17781791 - 17781664
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggca-aaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    ||||||||||   ||||||| |||| |||||| ||  |||| ||||||||||   ||||| | ||||| ||| ||||| || |||||||||||||||||     
T  17781791 gtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttg 17781692  T
Q  380 aaagtta-gggtggaaaaatgcacttta 406  Q
    ||||||| ||| |||||| |||||||||    
T  17781691 aaagttagggggggaaaagtgcacttta 17781664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 406
Target Start/End: Original strand, 20163588 - 20163654
Alignment:
Q  341 tagtttttgtatttaggaggccaaaattgcaagttttttaaagtta-gggtggaaaaatgcacttta 406  Q
    |||||||||||  ||||  ||||||||||||||||||| ||||||| ||||||| || |||||||||    
T  20163588 tagtttttgtacatagggagccaaaattgcaagtttttgaaagttaggggtggagaagtgcacttta 20163654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 284 - 410
Target Start/End: Original strand, 43900463 - 43900589
Alignment:
Q  284 aaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaag 383  Q
    ||||||||  ||||||||||||  |||||| ||  ||| | || |||||||||| | |||||||| ||||||||   |||||||| ||| ||||| ||||    
T  43900463 aaaattgatcaaaaggatcaaagatgcaaatgagataaatttttgggggcaaaactgtagtttttatatttagggaaccaaaattacaaatttttaaaag 43900562  T
Q  384 ttagggtggaaaaatgcactttaacct 410  Q
    ||||    ||||| |||||||||||||    
T  43900563 ttagaagagaaaagtgcactttaacct 43900589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 8521145 - 8521105
Alignment:
Q  269 agcattgactgagtcaaaattgacaaaaaggatcaaaattg 309  Q
    |||||||||||| |||||||||||||||| |||||| ||||    
T  8521145 agcattgactgaatcaaaattgacaaaaatgatcaatattg 8521105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 43899760 - 43899724
Alignment:
Q  99 tcaattgaaatttttgtgctttgttgttatgtgatgt 135  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  43899760 tcaattggaatttttgtgctttgttgttatgttatgt 43899724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 47524592 - 47524548
Alignment:
Q  343 gtttttgtatttaggaggccaaaattgcaagttttttaaagttag 387  Q
    ||||| ||| ||||| |||||||||||||||||||| ||||||||    
T  47524592 gttttggtacttagggggccaaaattgcaagtttttgaaagttag 47524548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 56; Significance: 6e-23; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 246 - 406
Target Start/End: Original strand, 61394 - 61557
Alignment:
Q  246 attacacgcatggcatg-ccactcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatag 343  Q
    ||||||||  ||||||| ||| ||||||||||||  |||||||||||| ||||||| ||||  |||||| |  |||| || |||||||| ||||||||||    
T  61394 attacacgtgtggcatgtccagtcagcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaaagggctaaatcatagggggccaaaattatag 61493  T
Q  344 tttttgtatttaggaggccaaaattgcaagttttttaaagtt-agggtggaaaaatgcacttta 406  Q
    |||||||| ||||| ||| |||||||||||||||| ||| || |||| |||||| |||||||||    
T  61494 tttttgtacttagggggctaaaattgcaagtttttgaaaattaagggaggaaaagtgcacttta 61557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 246 - 406
Target Start/End: Complemental strand, 60256 - 60093
Alignment:
Q  246 attacacgcatggcatgc-cactcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatag 343  Q
    ||||||||| |||||||  || ||||||||||||  |||||||||||| |||| || ||||  ||||||||  |||| || ||||||| ||||||| |||    
T  60256 attacacgcgtggcatgttcaatcagcattgacttggtcaaaattgaccaaaaagaccaaagatgcaaaggggctaaatcatagggggtcaaaattgtag 60157  T
Q  344 tttttgtatttaggaggccaaaattgcaagttttttaaagttag-ggtggaaaaatgcacttta 406  Q
    ||||| ||  |||| || ||||||||||||||||| |||||||| || |||||| |||||||||    
T  60156 tttttatacatagggggtcaaaattgcaagtttttaaaagttagaggaggaaaagtgcacttta 60093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 267 - 411
Target Start/End: Complemental strand, 1583 - 1437
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaa 365  Q
    ||||||||||||  |||||||||||| ||||||| ||||  |||||| |  |||| |||||||||| |||||||||||||||| ||  |||| || ||||    
T  1583 tcagcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttagggggtcaaaattatagtttttatacatagggggtcaaa 1484  T
Q  366 attgcaagttttttaaagttag-ggtggaaaaatgcactttaaccta 411  Q
    |||||||||||||||||||||| || |||||| | ||||||| ||||    
T  1483 attgcaagttttttaaagttagagggggaaaagtacactttagccta 1437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 248 - 411
Target Start/End: Original strand, 49370 - 49536
Alignment:
Q  248 tacacgcatggcatgccac-tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtt 345  Q
    ||||| ||||||||||||  ||||| |||| |  |||||||||| | ||||||| |||| |||||||||| |||| |||||||||| ||||||| |||||    
T  49370 tacacacatggcatgccaaatcagcgttgatttggtcaaaattggccaaaaggaccaaagttgcaaaggagctaaatcttagggggtcaaaattgtagtt 49469  T
Q  346 tttgtatttaggaggccaaaattgcaagttttttaaagtt-agggtggaaaaatgcactttaaccta 411  Q
    ||| | | |||| |||||||||||||| |||||||||||| ||||  ||||| ||||||||| ||||    
T  49470 tttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcactttagccta 49536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 3e-22; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 250 - 395
Target Start/End: Complemental strand, 6840353 - 6840207
Alignment:
Q  250 cacgcatggcatgccactcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagttttt 348  Q
    ||||||| |||||||||||||  |||||||||| |||||||   ||||||||||||  |||||||| | ||| |||||| ||| ||||||||||||||||    
T  6840353 cacgcattgcatgccactcagtgttgactgagttaaaattggtcaaaaggatcaaagatgcaaagggattaaatcttagagggtcaaaattatagttttt 6840254  T
Q  349 gtatttaggaggccaaaattgcaagttttttaaagttagggtggaaa 395  Q
    ||||||| | ||||||||| |||| ||||| ||| ||| || |||||    
T  6840253 gtatttaaggggccaaaatcgcaactttttgaaacttaagggggaaa 6840207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 248 - 411
Target Start/End: Complemental strand, 27437992 - 27437826
Alignment:
Q  248 tacacgcatggcatgccac-tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtt 345  Q
    ||||| ||||||||||||  ||||| |||| |  |||||||||| | ||||||| |||| |||||||||| |||| |||||||||| ||||||| |||||    
T  27437992 tacacacatggcatgccaaatcagcgttgatttggtcaaaattggccaaaaggaccaaagttgcaaaggagctaaatcttagggggtcaaaattgtagtt 27437893  T
Q  346 tttgtatttaggaggccaaaattgcaagttttttaaagtt-agggtggaaaaatgcactttaaccta 411  Q
    ||| | | |||| |||||||||||||| |||||||||||| ||||  ||||| ||||||||| ||||    
T  27437892 tttatttatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcactttagccta 27437826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 281 - 414
Target Start/End: Original strand, 1829574 - 1829709
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||||| |||| || ||||  ||||||||  |||| ||||||||||| |||||| |||||||| || ||||| || |||||||||||||||||     
T  1829574 gtcaaaattgaccaaaatgaccaaagatgcaaaggggctaaatcttagggggccaaaattgtagtttttatacttagggggtcaaaattgcaagttttta 1829673  T
Q  380 aaagttagggtggaaaaa-tgcactttaacctaaaa 414  Q
    |||||||||| | ||||| |||||||||||| ||||    
T  1829674 aaagttagggggaaaaaagtgcactttaaccaaaaa 1829709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 281 - 387
Target Start/End: Original strand, 26575025 - 26575132
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||| |||||||||||||| ||||||||||  ||| |||||||||| ||||||| ||||||||||| ||| | ||  ||||||||||||||||     
T  26575025 gtcaaaattggcaaaaaggatcaaagttgcaaaggagttaaatcttagggggccaaaattgtagtttttgtacttaaggggttaaaattgcaagtttttg 26575124  T
Q  380 aaagttag 387  Q
    ||||||||    
T  26575125 aaagttag 26575132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 413
Target Start/End: Original strand, 16704469 - 16704602
Alignment:
Q  282 tcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagtttttta 380  Q
    |||||||||||||||||||||| | ||||||||   |||| |||||  ||  ||||||| ||||||||||| ||||| || ||||||||||||||||| |    
T  16704469 tcaaaattgacaaaaaggatcatagttgcaaagaggctaaatcttaaaggatcaaaattgtagtttttgtacttagggggtcaaaattgcaagtttttga 16704568  T
Q  381 aagtt-agggtggaaaaatgcactttaacctaaa 413  Q
    ||||| |||| |||||| ||||||||| ||||||    
T  16704569 aagttaagggaggaaaagtgcactttagcctaaa 16704602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 270 - 397
Target Start/End: Original strand, 10785874 - 10786001
Alignment:
Q  270 gcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaatt 368  Q
    ||||||||| |||||||||||  ||||||||||||| |||||||||  |||| ||||| ||||  |||||| ||||||||||| ||||| ||  ||||||    
T  10785874 gcattgact-agtcaaaattggtaaaaaggatcaaagttgcaaaggggctaaatcttaaggggttaaaattgtagtttttgtacttagggggttaaaatt 10785972  T
Q  369 gcaagttttttaaagttagggtggaaaaa 397  Q
    |||| ||||| |||||||||| |||||||    
T  10785973 gcaaatttttaaaagttaggggggaaaaa 10786001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 281 - 415
Target Start/End: Complemental strand, 26574748 - 26574613
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaaaattatagtttttgtatttaggaggccaaaattgcaagtttttta 380  Q
    ||||||||||||||||| ||||||| |||||||||  |||| ||||| |||   ||| | ||||||||||| ||||  |  ||||||||||||||||| |    
T  26574748 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttaagggatcaaaatgtagtttttgtacttagaggttcaaaattgcaagtttttga 26574649  T
Q  381 aagttag-ggtggaaaaatgcactttaacctaaaat 415  Q
    ||||||| ||||| ||| ||||||||| ||||||||    
T  26574648 aagttagaggtgggaaattgcactttagcctaaaat 26574613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 294 - 413
Target Start/End: Complemental strand, 8821990 - 8821869
Alignment:
Q  294 aaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttag-ggtg 391  Q
    ||||||| |||| |||||| ||| |||| |||||||||| | ||||| | ||||| ||| ||||| |||||||||||||||||||| |||||||| || |    
T  8821990 aaaaggaccaaagttgcaatggagctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggg 8821891  T
Q  392 gaaaaatgcactttaacctaaa 413  Q
    ||||| ||||||||| ||||||    
T  8821890 gaaaagtgcactttagcctaaa 8821869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 271 - 411
Target Start/End: Original strand, 27322029 - 27322170
Alignment:
Q  271 cattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattg 369  Q
    |||||||||||||||||| ||  |||||||  |||   |||||||  |||||||||||||||  |||||| | ||||| ||| ||||| |||||||||||    
T  27322029 cattgactgagtcaaaatagagcaaaaggacgaaataagcaaaggggctaattcttagggggggaaaattgtggttttggtacttagggggccaaaattg 27322128  T
Q  370 caagttttttaaagttagggtggaaaaatgcactttaaccta 411  Q
    |||| |||| |||| ||||| |||||| ||||||||| ||||    
T  27322129 caagattttgaaagataggggggaaaagtgcactttagccta 27322170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 267 - 412
Target Start/End: Complemental strand, 8659409 - 8659262
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaa 365  Q
    ||||| ||||||  ||||||||||   ||||||| |||| |||||| ||  |||| |||||||||| | ||||| | ||||| ||| ||||| |||||||    
T  8659409 tcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaa 8659310  T
Q  366 attgcaagttttttaaagttag-ggtggaaaaatgcactttaacctaa 412  Q
    ||||||||||||| |||||||| || |||||| ||||||||| |||||    
T  8659309 attgcaagtttttgaaagttagagggggaaaagtgcactttagcctaa 8659262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 280 - 411
Target Start/End: Original strand, 7316264 - 7316397
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||||| ||||||| || |  ||||||||  |||| ||||| ||||| |||||| | ||||   |||||||| ||||||||||||||||||||    
T  7316264 agtcaaaattgaccaaaaggaccatagatgcaaaggggctaaatcttaaggggccaaaattgtggtttcaatatttagggggccaaaattgcaagttttt 7316363  T
Q  379 taaagtt-agggtggaaaaatgcactttaaccta 411  Q
     |||||| |||| |||||| ||||||||| ||||    
T  7316364 gaaagttaaggggggaaaagtgcactttagccta 7316397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 267 - 406
Target Start/End: Original strand, 8660161 - 8660301
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattctta-gggggcaaaattatagtttttgtatttaggaggccaaa 365  Q
    ||||| ||||||  ||||||||||   |||||||||||| |||||| ||| |||| ||||| |||||| ||||| | ||||| ||| ||||| || ||||    
T  8660161 tcagcgttgacttggtcaaaattggtcaaaaggatcaaagttgcaatggagctaaatcttaggggggctaaattgtggttttggtacttagg-ggtcaaa 8660259  T
Q  366 attgcaagttttttaaagttagg-gtggaaaaatgcacttta 406  Q
    ||||||||||||| ||||||||| | |||||| |||||||||    
T  8660260 attgcaagtttttgaaagttaggaggggaaaagtgcacttta 8660301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 280 - 406
Target Start/End: Complemental strand, 7315010 - 7314883
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||||| |||| || ||||  ||||||||  |||| |||||||||| ||||||| | |||||  || ||||| ||||||||||||||||||||    
T  7315010 agtcaaaattgaccaaaatgaccaaagatgcaaaggggctaaatcttagggggtcaaaattgttgttttgatacttagg-ggccaaaattgcaagttttt 7314912  T
Q  379 taaagttag-ggtggaaaaatgcacttta 406  Q
     |||||||| || |||||| |||||||||    
T  7314911 gaaagttagagggggaaaagtgcacttta 7314883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 386
Target Start/End: Complemental strand, 10784724 - 10784617
Alignment:
Q  281 gtcaaaattgacaaaaa-ggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||| ||||| |||||||| |||||||||  |||| |||| |||||| |||||| |||||||| || ||||| ||  ||||||||||||||||    
T  10784724 gtcaaaattgataaaaaaggatcaaagttgcaaaggggctaaatctttgggggccaaaattgtagtttttatacttagggggttaaaattgcaagttttt 10784625  T
Q  379 taaagtta 386  Q
     |||||||    
T  10784624 aaaagtta 10784617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 281 - 411
Target Start/End: Original strand, 14823546 - 14823679
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||||| ||||| || ||  |||||| ||  |||| ||||||||||| |||||| |||||| |||| ||| | ||| |||||||||||||||||    
T  14823546 gtcaaaattgaccaaaagaattaaggttgcaacggttctaaatcttagggggccaaaattgtagtttctgtacttaaggggctaaaattgcaagtttttt 14823645  T
Q  380 aaagttagggtggaaaaa--tgcactttaaccta 411  Q
    ||| ||| || |||||||  ||||||||| ||||    
T  14823646 aaaattaagggggaaaaaagtgcactttagccta 14823679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 267 - 411
Target Start/End: Original strand, 34834536 - 34834682
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaa 365  Q
    ||||| ||||||  ||||||||||   ||||||| |||| |||||| ||  |||| |||||||||| | ||||| | |||||  || |||||||  ||||    
T  34834536 tcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttgatacttaggagatcaaa 34834635  T
Q  366 attgcaagttttttaaagttaggg-tggaaaaatgcactttaaccta 411  Q
    ||||||||||||| ||||||||||  |||||| ||||||||||||||    
T  34834636 attgcaagtttttgaaagttagggagggaaaagtgcactttaaccta 34834682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 267 - 406
Target Start/End: Complemental strand, 3721756 - 3721615
Alignment:
Q  267 tcagcattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaa 365  Q
    ||||| ||||||  ||||||||||   ||||||| |||| |||||| ||  |||| ||||| |||| | ||||||| ||||| ||| ||||| || ||||    
T  3721756 tcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaaggggtctaaattatggttttggtacttagggggtcaaa 3721657  T
Q  366 attgcaagttttttaaagttag-ggtggaaaaatgcacttta 406  Q
    ||||||||||||| |||||||| || |||||| |||||||||    
T  3721656 attgcaagtttttgaaagttagagggggaaaagtgcacttta 3721615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 435 - 516
Target Start/End: Complemental strand, 13580222 - 13580141
Alignment:
Q  435 ataggataggggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatgcctcgccaatctcctgacttag 516  Q
    ||||||| ||||||||  || ||||||||||| | | ||| ||||||||| ||||||||||||  ||||||||||| |||||    
T  13580222 ataggatgggggttctacggggtgccaacctaatggggatgtcgttgctttcccttgatgcctgtccaatctcctggcttag 13580141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 271 - 411
Target Start/End: Complemental strand, 27318456 - 27318313
Alignment:
Q  271 cattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggca---aaattatagtttttgtatttaggaggccaaaat 367  Q
    |||||||||||||||||| || ||||||||  |||   |||||||  |||||||||||||||     ||||| | ||||| ||| ||||| |||||||||    
T  27318456 cattgactgagtcaaaatagagaaaaaggacgaaataagcaaaggggctaattcttaggggggggggaaattgtggttttggtacttagggggccaaaat 27318357  T
Q  368 tgcaagttttttaaagttagggtggaaaaatgcactttaaccta 411  Q
    |||||| |||| |||| ||||| | |||  ||||||||| ||||    
T  27318356 tgcaagattttgaaagatagggggaaaaggtgcactttagccta 27318313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 410
Target Start/End: Complemental strand, 29473204 - 29473076
Alignment:
Q  284 aaaattgacaaaaaggatcaaaattgcaaaggaactaattcttag-ggggcaaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaa 382  Q
    ||||||||||||||||||||||||||||||||  | ||||||| | ||| ||||||| |  |||||||   ||||   |||||||||||| ||||| |||    
T  29473204 aaaattgacaaaaaggatcaaaattgcaaaggggccaattcttggagggccaaaattgttatttttgttcatagggaaccaaaattgcaactttttaaaa 29473105  T
Q  383 gtt-agggtggaaaaatgcactttaacct 410  Q
     || |||| |||||| ||||||| |||||    
T  29473104 cttaaggggggaaaagtgcacttgaacct 29473076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 494
Target Start/End: Complemental strand, 34673166 - 34673082
Alignment:
Q  410 taaaattttctctgagattgatggtataggataggggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatg 494  Q
    |||||| |||| ||||||||  |||||||||| ||||||||  |  ||| ||||||||||| ||| ||||||||| |||||||||    
T  34673166 taaaatattctatgagattggcggtataggatgggggttctgcgaggtgtcaacctagttgggatgtcgttgctttcccttgatg 34673082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 414
Target Start/End: Complemental strand, 14822490 - 14822355
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||| ||  |||||||| ||| |||||| |  ||||| ||||||||||| |||||| |||||| | || ||| | ||||||||||||||||||||     
T  14822490 gtcaaaatagattaaaaggattaaagttgcaatgagactaaatcttagggggccaaaattgtagtttctatacttatggggccaaaattgcaagtttttg 14822391  T
Q  380 aaagtt-agggtggaaaaatgcactttaacctaaaa 414  Q
    ||| || ||||  ||||| |||||| || |||||||    
T  14822390 aaaattaaggggtgaaaagtgcactctagcctaaaa 14822355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 414
Target Start/End: Original strand, 3722527 - 3722613
Alignment:
Q  329 ggggcaaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttaggg-tggaaaaatgcactttaacctaaaa 414  Q
    ||||| ||||| | ||||| ||| ||||  || ||||||||||||||||| ||||||||||  |||||| ||||||||| |||||||    
T  3722527 ggggctaaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggagggaaaagtgcactttagcctaaaa 3722613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 325 - 406
Target Start/End: Complemental strand, 16703653 - 16703573
Alignment:
Q  325 ttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttagggtggaaaaatgcacttta 406  Q
    ||||||||| |||||| ||||||||||||||| | |  ||||||||||||||||| |||| ||||| |||||| |||||||||    
T  16703653 ttagggggctaaaattgtagtttttgtatttatg-gatcaaaattgcaagtttttgaaagataggg-ggaaaagtgcacttta 16703573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 281 - 339
Target Start/End: Original strand, 22418867 - 22418924
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggcaaaatt 339  Q
    |||||||||||| |||||| ||| |||||||||||  |||| |||||||||||||||||    
T  22418867 gtcaaaattgaccaaaagg-tcacaattgcaaaggggctaaatcttagggggcaaaatt 22418924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 414
Target Start/End: Original strand, 6842308 - 6842389
Alignment:
Q  334 aaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttag-ggtggaaaaatgcactttaacctaaaa 414  Q
    |||||| ||||||||| |  |||| |||||||||||||| ||||| ||| |||| || |||||| ||||||||| |||||||    
T  6842308 aaaattgtagtttttgcacatagggggccaaaattgcaactttttgaaacttagagggggaaaagtgcactttagcctaaaa 6842389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 281 - 406
Target Start/End: Complemental strand, 363 - 236
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    ||||||||||  |||||||||||||  ||||||||  |||||||||||||| | ||||||||||||||||||  |||| | |||||||||||| |||||     
T  363 gtcaaaattgggaaaaaggatcaaatatgcaaaggggctaattcttaggggaccaaaattatagtttttgtacataggggaccaaaattgcaactttttg 264  T
Q  380 aaagtt-agggtggaaaaatgcacttta 406  Q
    |||||| |||| || ||| |||||||||    
T  263 aaagttaagggggggaaagtgcacttta 236  T

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Target: scaffold2034; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 281 - 386
Target Start/End: Original strand, 949 - 1055
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    ||||||||||  |||||||| ||||  ||||||||  ||||||||| |||||| ||||||||||||||||||  || | | |||||||||||| |||||     
T  949 gtcaaaattgggaaaaaggaccaaatatgcaaaggggctaattcttggggggccaaaattatagtttttgtacataagggaccaaaattgcaacttttta 1048  T
Q  380 aaagtta 386  Q
    |||||||    
T  1049 aaagtta 1055  T

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Target: scaffold0320 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 280 - 413
Target Start/End: Complemental strand, 19619 - 19484
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||||| |||| |||||||  ||||||||   ||| |||||||||  ||||||| |||||||| || ||||| ||||||||||||||| ||||    
T  19619 agtcaaaattgaccaaaatgatcaaagatgcaaaggggttaaatcttaggggatcaaaattgtagtttttatacttagggggccaaaattgcaaggtttt 19520  T
Q  379 taaagtt-agggtggaaaaatgcactttaacctaaa 413  Q
     ||| || |||| |||||||||||||||| ||||||    
T  19519 gaaaattaaggggggaaaaatgcactttagcctaaa 19484  T

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Target: scaffold0093 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 273 - 406
Target Start/End: Original strand, 2428 - 2562
Alignment:
Q  273 ttgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgca 371  Q
    ||||||| |||||||||||| |||||||| ||| |||||| | | |||| || ||||||| ||||||  | ||||||||| ||||| || ||||||||||    
T  2428 ttgactgggtcaaaattgaccaaaaggatgaaatttgcaatgtagctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgca 2527  T
Q  372 agtttttt-aaagttagggtggaaaaatgcacttta 406  Q
    |||||||| |||||||||| |||||| |||||||||    
T  2528 agttttttgaaagttaggg-ggaaaagtgcacttta 2562  T

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Target: scaffold0093; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 273 - 406
Target Start/End: Original strand, 7051 - 7185
Alignment:
Q  273 ttgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgca 371  Q
    ||||||| |||||||||||| |||||||| ||| |||||| | | |||| || ||||||| ||||||  | ||||||||| ||||| || ||||||||||    
T  7051 ttgactgggtcaaaattgaccaaaaggatgaaatttgcaatgtagctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgca 7150  T
Q  372 agtttttt-aaagttagggtggaaaaatgcacttta 406  Q
    |||||||| |||||||||| |||||| |||||||||    
T  7151 agttttttgaaagttaggg-ggaaaagtgcacttta 7185  T

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Target: scaffold0294 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 281 - 412
Target Start/End: Original strand, 5409 - 5542
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattctta-gggggcaaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    ||||||||| || |||||||||||| ||| || ||  |||| ||||| |||||||||||| ||||||||||| ||| | || |||||||||||||||||     
T  5409 gtcaaaattaaccaaaaggatcaaatttgtaatggggctaaatcttaagggggcaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttg 5508  T
Q  380 aaagtta-gggtggaaaaatgcactttaacctaa 412  Q
    ||| ||| ||| |||||| ||||||||| |||||    
T  5509 aaaattagggggggaaaagtgcactttagcctaa 5542  T

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Target: scaffold0059 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 406
Target Start/End: Original strand, 4754 - 4827
Alignment:
Q  333 caaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagttagggtggaaaaatgcacttta 406  Q
    ||||||| |||||| |||||||||| ||||||||||||| |||||| |||||||||| || ||| |||||||||    
T  4754 caaaattgtagtttctgtatttagggggccaaaattgcatgtttttaaaagttagggagggaaagtgcacttta 4827  T

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Target: scaffold0059; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 280 - 389
Target Start/End: Complemental strand, 3806 - 3696
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||||| |||| ||| ||| |||||| |   |||| ||||||||| | ||||||||||||| | || | ||| ||||||||||||||||||||    
T  3806 agtcaaaattgaccaaaaagattaaagttgcaatgcggctaaatcttaggggactaaaattatagtttctttactcagggggccaaaattgcaagttttt 3707  T
Q  379 taaagttaggg 389  Q
     ||||||||||    
T  3706 gaaagttaggg 3696  T

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Target: scaffold0111 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 410 - 508
Target Start/End: Complemental strand, 41326 - 41228
Alignment:
Q  410 taaaattttctctgagattgatggtataggataggggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatgcctcgccaatctcc 508  Q
    ||||||||| |||||| |||  || |||||||  |||||||  || ||||||||||||||| ||| |||||||||||||||||||| |  |||||||||    
T  41326 taaaattttatctgagtttggcggcataggatgagggttctgcggggtgccaacctagttgggatttcgttgcttccccttgatgcatgtccaatctcc 41228  T

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Target: scaffold0045 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 334 - 406
Target Start/End: Original strand, 49109 - 49182
Alignment:
Q  334 aaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagtt-agggtggaaaaatgcacttta 406  Q
    |||||| |||||||  || |||||||||||||||||||||||||| |||||| ||||||||||| |||| ||||    
T  49109 aaaattgtagttttaatacttaggaggccaaaattgcaagtttttaaaagttaagggtggaaaagtgcaattta 49182  T

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Target: scaffold0041 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 415 - 516
Target Start/End: Complemental strand, 3478 - 3377
Alignment:
Q  415 ttttctctgagattgatggtataggataggggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatgcctcgccaatctcctgactt 514  Q
    |||| ||||||||||  || ||||||| ||||||||  || ||||||||||||||| ||| | ||||||||||| ||||||||  |||||||| || |||    
T  3478 ttttatctgagattggcggcataggatgggggttctgcggagtgccaacctagttgggatgttgttgcttccccctgatgcctgtccaatctcttggctt 3379  T
Q  515 ag 516  Q
    ||    
T  3378 ag 3377  T

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Target: scaffold0186 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 417
Target Start/End: Complemental strand, 23210 - 23073
Alignment:
Q  280 agtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggg-gcaaaattatagtttttgtatttaggaggccaaaattgcaagttttt 378  Q
    ||||||||||||  |||| ||| ||| |||||| ||  ||||  |||||||| |||| ||| | ||||| ||| ||||  || |||||||||||||||||    
T  23210 agtcaaaattgagcaaaatgataaaatttgcaatggggctaaagcttaggggagcaagattgttgttttggtacttagagggacaaaattgcaagttttt 23111  T
Q  379 taaagttagggtggaaaaatgcactttaacctaaaattt 417  Q
     |||||||||| |||||| ||||||||| || |||||||    
T  23110 gaaagttaggg-ggaaaagtgcactttagccaaaaattt 23073  T

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Target: scaffold0186; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 350 - 418
Target Start/End: Original strand, 23931 - 24000
Alignment:
Q  350 tatttaggaggccaaaattgcaagttttttaaagttagggtggaaaaa-tgcactttaacctaaaatttt 418  Q
    ||||||||  ||||||||||||||||||| |||||||||| | ||||| ||||||||| |||||| ||||    
T  23931 tatttagggagccaaaattgcaagtttttgaaagttagggagaaaaaagtgcactttagcctaaattttt 24000  T

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Target: scaffold0112 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 406
Target Start/End: Complemental strand, 37277 - 37151
Alignment:
Q  281 gtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttagggggc-aaaattatagtttttgtatttaggaggccaaaattgcaagtttttt 379  Q
    |||||||||||| |||| ||| ||| || ||| ||  |||| || |||||||| |||||| | ||||||||| ||||| || ||||||||||| ||||||    
T  37277 gtcaaaattgaccaaaatgatgaaattttcaatggggctaaatcgtagggggccaaaattgttgtttttgtacttagggggtcaaaattgcaaatttttt 37178  T
Q  380 -aaagttagggtggaaaaatgcacttta 406  Q
     |||| ||||| |||||| |||||||||    
T  37177 aaaagataggg-ggaaaagtgcacttta 37151  T

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Target: scaffold0586 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 413
Target Start/End: Complemental strand, 6436 - 6339
Alignment:
Q  318 ctaattcttaggggg-caaaattatagtttttgtatttaggaggccaaaattgcaagttttttaaagtta-gggtggaaaaatgcactttaacctaaa 413  Q
    |||| |||||||||| ||||||| |||||||||||  |||| ||| ||||| | || ||||| ||| ||| ||| |||||| ||||||||||||||||    
T  6436 ctaaatcttagggggtcaaaattgtagtttttgtacatagggggctaaaatcgtaactttttgaaacttaagggcggaaaagtgcactttaacctaaa 6339  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 332
Target Start/End: Original strand, 7880 - 7941
Alignment:
Q  271 cattgactgagtcaaaattgacaaaaaggatcaaaattgcaaaggaactaattcttaggggg 332  Q
    |||||||| ||||||||||| | |||||||||||| |||||||||  |||| || |||||||    
T  7880 cattgactaagtcaaaattggccaaaaggatcaaagttgcaaaggggctaaatcataggggg 7941  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 460 - 497
Target Start/End: Complemental strand, 146018 - 145981
Alignment:
Q  460 caacctagttgcgatatcgttgcttccccttgatgcct 497  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  146018 caacctagttgggatgtcgttgcttccccttgatgcct 145981  T

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Target: scaffold0024; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 516
Target Start/End: Original strand, 160298 - 160399
Alignment:
Q  415 ttttctctgagattgatggtataggataggggttctttggtgtgccaacctagttgcgatatcgttgcttccccttgatgcctcgccaatctcctgactt 514  Q
    |||| ||||||||||  || |||| || ||||||||  || ||| ||||||||||| ||| ||||||||||||| ||||||    ||||||||||| |||    
T  160298 ttttatctgagattggcggcatagaatgggggttctgcggggtggcaacctagttgggatgtcgttgcttccccctgatgcaggtccaatctcctggctt 160397  T
Q  515 ag 516  Q
    ||    
T  160398 ag 160399  T

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